BLASTX nr result
ID: Sinomenium21_contig00010754
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00010754
(367 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007011878.1| DEAD/DEAH box RNA helicase family protein is... 81 1e-17
ref|XP_007011880.1| DEAD/DEAH box RNA helicase family protein is... 81 1e-17
ref|XP_007011879.1| DEAD/DEAH box RNA helicase family protein is... 81 1e-17
emb|CBI21031.3| unnamed protein product [Vitis vinifera] 82 3e-17
ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 82 3e-17
ref|XP_002324856.1| hypothetical protein POPTR_0018s01620g [Popu... 80 2e-16
gb|EXB88204.1| DEAD-box ATP-dependent RNA helicase 56 [Morus not... 80 2e-16
ref|XP_002309623.1| hypothetical protein POPTR_0006s26940g [Popu... 80 5e-16
gb|ABK93079.1| unknown [Populus trichocarpa] 80 5e-16
ref|XP_006353691.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 81 1e-15
ref|XP_004241774.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 81 1e-15
ref|XP_004498730.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 80 5e-15
ref|XP_004498731.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 80 5e-15
ref|XP_006483351.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 85 9e-15
ref|XP_006450448.1| hypothetical protein CICLE_v10008383mg [Citr... 85 9e-15
ref|XP_006450447.1| hypothetical protein CICLE_v10008383mg [Citr... 85 9e-15
ref|XP_006450446.1| hypothetical protein CICLE_v10008383mg [Citr... 85 9e-15
ref|XP_002873498.1| hypothetical protein ARALYDRAFT_909079 [Arab... 81 2e-14
ref|XP_007023163.1| DEAD/DEAH box RNA helicase family protein is... 77 2e-14
ref|XP_007023164.1| DEAD/DEAH box RNA helicase family protein is... 77 2e-14
>ref|XP_007011878.1| DEAD/DEAH box RNA helicase family protein isoform 1 [Theobroma
cacao] gi|508782241|gb|EOY29497.1| DEAD/DEAH box RNA
helicase family protein isoform 1 [Theobroma cacao]
Length = 485
Score = 81.3 bits (199), Expect(2) = 1e-17
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GE+AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 34 GESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
Score = 34.3 bits (77), Expect(2) = 1e-17
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDNDA KAPDS +A V+ S ++G
Sbjct: 1 MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKG 40
>ref|XP_007011880.1| DEAD/DEAH box RNA helicase family protein isoform 3 [Theobroma
cacao] gi|508782243|gb|EOY29499.1| DEAD/DEAH box RNA
helicase family protein isoform 3 [Theobroma cacao]
Length = 429
Score = 81.3 bits (199), Expect(2) = 1e-17
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GE+AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 34 GESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
Score = 34.3 bits (77), Expect(2) = 1e-17
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDNDA KAPDS +A V+ S ++G
Sbjct: 1 MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKG 40
>ref|XP_007011879.1| DEAD/DEAH box RNA helicase family protein isoform 2 [Theobroma
cacao] gi|508782242|gb|EOY29498.1| DEAD/DEAH box RNA
helicase family protein isoform 2 [Theobroma cacao]
Length = 428
Score = 81.3 bits (199), Expect(2) = 1e-17
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GE+AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 34 GESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
Score = 34.3 bits (77), Expect(2) = 1e-17
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDNDA KAPDS +A V+ S ++G
Sbjct: 1 MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKG 40
>emb|CBI21031.3| unnamed protein product [Vitis vinifera]
Length = 521
Score = 82.4 bits (202), Expect(2) = 3e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 34 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
Score = 31.6 bits (70), Expect(2) = 3e-17
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDNDA KAPDS + V+ + ++G
Sbjct: 1 MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKG 40
>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
vinifera]
Length = 428
Score = 82.4 bits (202), Expect(2) = 3e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 34 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
Score = 31.6 bits (70), Expect(2) = 3e-17
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDNDA KAPDS + V+ + ++G
Sbjct: 1 MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKG 40
>ref|XP_002324856.1| hypothetical protein POPTR_0018s01620g [Populus trichocarpa]
gi|222866290|gb|EEF03421.1| hypothetical protein
POPTR_0018s01620g [Populus trichocarpa]
Length = 428
Score = 79.7 bits (195), Expect(2) = 2e-16
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GEA KKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSE
Sbjct: 34 GEAVKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSE 72
Score = 31.6 bits (70), Expect(2) = 2e-16
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDNDA KAPDS A V+ + ++G
Sbjct: 1 MGETRDNDAYEEELLDYEEEDDKAPDSVGAKVNGEAVKKG 40
>gb|EXB88204.1| DEAD-box ATP-dependent RNA helicase 56 [Morus notabilis]
Length = 518
Score = 80.5 bits (197), Expect(2) = 2e-16
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GEA KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 34 GEAPKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
Score = 30.4 bits (67), Expect(2) = 2e-16
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDND KAPDS A V+ + ++G
Sbjct: 1 MGETRDNDVYDEELVDYEEEDEKAPDSVGAKVNGEAPKKG 40
>ref|XP_002309623.1| hypothetical protein POPTR_0006s26940g [Populus trichocarpa]
gi|222855599|gb|EEE93146.1| hypothetical protein
POPTR_0006s26940g [Populus trichocarpa]
Length = 428
Score = 79.7 bits (195), Expect(2) = 5e-16
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GEA KKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSE
Sbjct: 34 GEAVKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSE 72
Score = 30.0 bits (66), Expect(2) = 5e-16
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDND KAPDS A V+ + ++G
Sbjct: 1 MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKG 40
>gb|ABK93079.1| unknown [Populus trichocarpa]
Length = 428
Score = 79.7 bits (195), Expect(2) = 5e-16
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GEA KKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSE
Sbjct: 34 GEAVKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSE 72
Score = 30.0 bits (66), Expect(2) = 5e-16
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGETRDND KAPDS A V+ + ++G
Sbjct: 1 MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKG 40
>ref|XP_006353691.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like [Solanum
tuberosum]
Length = 428
Score = 81.3 bits (199), Expect(2) = 1e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GE+AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 34 GESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
Score = 27.3 bits (59), Expect(2) = 1e-15
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MG+T++N+A KAPDS + V+ S ++G
Sbjct: 1 MGDTKENEAYEEELLDYEEDDEKAPDSVNGKVNGESAKKG 40
>ref|XP_004241774.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Solanum
lycopersicum]
Length = 428
Score = 81.3 bits (199), Expect(2) = 1e-15
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GE+AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 34 GESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
Score = 27.3 bits (59), Expect(2) = 1e-15
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MG+T++N+A KAPDS + V+ S ++G
Sbjct: 1 MGDTKENEAYEEELLDYEEDDEKAPDSVNGKVNGESAKKG 40
>ref|XP_004498730.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1
[Cicer arietinum]
Length = 487
Score = 79.7 bits (195), Expect(2) = 5e-15
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 33 GESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
Score = 26.6 bits (57), Expect(2) = 5e-15
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGET+D +A KAPDSA V+ SG++G
Sbjct: 1 MGETKD-EAYEEELLDYEEEDDKAPDSAGTKVNGESGKKG 39
>ref|XP_004498731.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X2
[Cicer arietinum]
Length = 427
Score = 79.7 bits (195), Expect(2) = 5e-15
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 33 GESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
Score = 26.6 bits (57), Expect(2) = 5e-15
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA*VDWRSGEEG 269
MGET+D +A KAPDSA V+ SG++G
Sbjct: 1 MGETKD-EAYEEELLDYEEEDDKAPDSAGTKVNGESGKKG 39
>ref|XP_006483351.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Citrus
sinensis]
Length = 427
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +1
Query: 232 LAPRSTGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
+A ++ GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 27 VATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
>ref|XP_006450448.1| hypothetical protein CICLE_v10008383mg [Citrus clementina]
gi|557553674|gb|ESR63688.1| hypothetical protein
CICLE_v10008383mg [Citrus clementina]
Length = 427
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +1
Query: 232 LAPRSTGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
+A ++ GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 27 VATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
>ref|XP_006450447.1| hypothetical protein CICLE_v10008383mg [Citrus clementina]
gi|557553673|gb|ESR63687.1| hypothetical protein
CICLE_v10008383mg [Citrus clementina]
Length = 343
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +1
Query: 232 LAPRSTGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
+A ++ GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 27 VATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
>ref|XP_006450446.1| hypothetical protein CICLE_v10008383mg [Citrus clementina]
gi|557553672|gb|ESR63686.1| hypothetical protein
CICLE_v10008383mg [Citrus clementina]
Length = 423
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +1
Query: 232 LAPRSTGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
+A ++ GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 27 VATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
>ref|XP_002873498.1| hypothetical protein ARALYDRAFT_909079 [Arabidopsis lyrata subsp.
lyrata] gi|297319335|gb|EFH49757.1| hypothetical protein
ARALYDRAFT_909079 [Arabidopsis lyrata subsp. lyrata]
Length = 427
Score = 80.9 bits (198), Expect(2) = 2e-14
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +1
Query: 250 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
GEA KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 33 GEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
Score = 23.5 bits (49), Expect(2) = 2e-14
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSAS 236
MG+ RDN+A K PDS S
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDSGS 29
>ref|XP_007023163.1| DEAD/DEAH box RNA helicase family protein isoform 1 [Theobroma
cacao] gi|508778529|gb|EOY25785.1| DEAD/DEAH box RNA
helicase family protein isoform 1 [Theobroma cacao]
Length = 427
Score = 76.6 bits (187), Expect(2) = 2e-14
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +1
Query: 253 EAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
++AKKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSE
Sbjct: 34 DSAKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSE 71
Score = 27.7 bits (60), Expect(2) = 2e-14
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA 239
MGE +DNDA KAPDS SA
Sbjct: 1 MGEIKDNDAYEEELLDYEEEDEKAPDSVSA 30
>ref|XP_007023164.1| DEAD/DEAH box RNA helicase family protein isoform 2 [Theobroma
cacao] gi|508778530|gb|EOY25786.1| DEAD/DEAH box RNA
helicase family protein isoform 2 [Theobroma cacao]
Length = 406
Score = 76.6 bits (187), Expect(2) = 2e-14
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +1
Query: 253 EAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 366
++AKKGYVGIHSSGFRDFLLKPELLR+IVDSGFEHPSE
Sbjct: 34 DSAKKGYVGIHSSGFRDFLLKPELLRSIVDSGFEHPSE 71
Score = 27.7 bits (60), Expect(2) = 2e-14
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 150 MGETRDNDAXXXXXXXXXXXXXKAPDSASA 239
MGE +DNDA KAPDS SA
Sbjct: 1 MGEIKDNDAYEEELLDYEEEDEKAPDSVSA 30