BLASTX nr result
ID: Sinomenium21_contig00010697
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00010697
(396 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su... 102 7e-20
emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera] 102 7e-20
ref|XP_007201425.1| hypothetical protein PRUPE_ppa013559mg [Prun... 101 1e-19
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su... 100 4e-19
ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citr... 99 8e-19
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, ... 98 1e-18
ref|XP_007131395.1| hypothetical protein PHAVU_011G010100g [Phas... 98 1e-18
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin... 98 1e-18
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su... 97 2e-18
ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II su... 97 3e-18
gb|AFK46555.1| unknown [Lotus japonicus] 97 3e-18
gb|EYU44082.1| hypothetical protein MIMGU_mgv1a025818mg, partial... 94 2e-17
gb|EYU24439.1| hypothetical protein MIMGU_mgv1a016444mg [Mimulus... 94 2e-17
ref|XP_006857607.1| hypothetical protein AMTR_s00061p00108850 [A... 93 4e-17
ref|XP_002517812.1| DNA-directed RNA polymerase II 13.6 kD polyp... 93 4e-17
ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa poly... 93 4e-17
ref|XP_007052503.1| DNA-directed RNA polymerase II subunit RPB11... 92 7e-17
ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Caps... 92 7e-17
gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK... 92 1e-16
ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutr... 91 1e-16
>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
product [Vitis vinifera]
Length = 116
Score = 102 bits (253), Expect = 7e-20
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKII+RIHTTSQSSPMQAYNQAI DLDKEL++LK FE ++KHSREY
Sbjct: 60 GYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEVELAKHSREY 116
>emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera]
Length = 129
Score = 102 bits (253), Expect = 7e-20
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKII+RIHTTSQSSPMQAYNQAI DLDKEL++LK FE ++KHSREY
Sbjct: 73 GYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEVELAKHSREY 129
>ref|XP_007201425.1| hypothetical protein PRUPE_ppa013559mg [Prunus persica]
gi|462396825|gb|EMJ02624.1| hypothetical protein
PRUPE_ppa013559mg [Prunus persica]
Length = 116
Score = 101 bits (251), Expect = 1e-19
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK FE ++KHS EY
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSCFEAEVAKHSVEY 116
>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Cucumis sativus] gi|449516703|ref|XP_004165386.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Cucumis sativus]
Length = 116
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK FE +K SR+Y
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKFSRDY 116
>ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citrus clementina]
gi|568858641|ref|XP_006482856.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 11-like [Citrus
sinensis] gi|557541285|gb|ESR52329.1| hypothetical
protein CICLE_v10033103mg [Citrus clementina]
Length = 116
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+ LK FE ++KHSR Y
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDTLKSAFEAELAKHSRVY 116
>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11
[Glycine max]
Length = 116
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQ+I DLD+EL+HLK FE M K SR+Y
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAEMLKFSRDY 116
>ref|XP_007131395.1| hypothetical protein PHAVU_011G010100g [Phaseolus vulgaris]
gi|561004395|gb|ESW03389.1| hypothetical protein
PHAVU_011G010100g [Phaseolus vulgaris]
Length = 116
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKII+RIHTTSQSSPMQAYNQ+I DLD+EL+HLK FE M K SR+Y
Sbjct: 60 GYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFEAEMLKFSRDY 116
>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
gi|255626235|gb|ACU13462.1| unknown [Glycine max]
Length = 116
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQ++ DLD+EL+HLK FE M K SR+Y
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFEAEMLKFSRDY 116
>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
isoform 2 [Fragaria vesca subsp. vesca]
Length = 118
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSRE 227
GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK FE ++KHS +
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEAEVAKHSMQ 115
>ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Solanum lycopersicum] gi|565346226|ref|XP_006340167.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 11-like [Solanum tuberosum]
Length = 116
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKI++RI TTSQSSPMQAYNQAI DLDKEL+HLK FE ++KH+R+Y
Sbjct: 60 GYKLPHPLQYKILLRIQTTSQSSPMQAYNQAINDLDKELDHLKSQFEGELAKHTRDY 116
>gb|AFK46555.1| unknown [Lotus japonicus]
Length = 116
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKIIVRIHT SQSSPMQAYNQ+I DLDKEL+HLK FE M + SR+Y
Sbjct: 60 GYKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKNAFEADMLRFSRDY 116
>gb|EYU44082.1| hypothetical protein MIMGU_mgv1a025818mg, partial [Mimulus
guttatus]
Length = 73
Score = 94.0 bits (232), Expect = 2e-17
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHS 233
GYKLPHPLQYKI++RIHTTSQSSPMQAYNQAI DLDKEL+HLK FE +++H+
Sbjct: 12 GYKLPHPLQYKILLRIHTTSQSSPMQAYNQAINDLDKELDHLKNEFEVALARHT 65
>gb|EYU24439.1| hypothetical protein MIMGU_mgv1a016444mg [Mimulus guttatus]
gi|604305261|gb|EYU24440.1| hypothetical protein
MIMGU_mgv1a016444mg [Mimulus guttatus]
Length = 121
Score = 94.0 bits (232), Expect = 2e-17
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHS 233
GYKLPHPLQYKI++RIHTTSQSSPMQAYNQAI DLDKEL+HLK FE +++H+
Sbjct: 60 GYKLPHPLQYKILLRIHTTSQSSPMQAYNQAINDLDKELDHLKNEFEVALARHT 113
>ref|XP_006857607.1| hypothetical protein AMTR_s00061p00108850 [Amborella trichopoda]
gi|548861703|gb|ERN19074.1| hypothetical protein
AMTR_s00061p00108850 [Amborella trichopoda]
Length = 122
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFE 254
GYKLPHPLQYKIIVRI TTSQSSPMQAYNQAI DLDKELNHLK++FE
Sbjct: 60 GYKLPHPLQYKIIVRIQTTSQSSPMQAYNQAINDLDKELNHLKDIFE 106
>ref|XP_002517812.1| DNA-directed RNA polymerase II 13.6 kD polypeptide, putative
[Ricinus communis] gi|223543084|gb|EEF44619.1|
DNA-directed RNA polymerase II 13.6 kD polypeptide,
putative [Ricinus communis]
Length = 156
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEE 251
GY+LPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK FEE
Sbjct: 60 GYRLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEE 107
>ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa polypeptide family protein
[Populus trichocarpa] gi|566186802|ref|XP_006379118.1|
hypothetical protein POPTR_0009s07520g [Populus
trichocarpa] gi|118484276|gb|ABK94017.1| unknown
[Populus trichocarpa] gi|222849662|gb|EEE87209.1|
DNA-directed RNA polymerase II 13.6 kDa polypeptide
family protein [Populus trichocarpa]
gi|550331237|gb|ERP56915.1| hypothetical protein
POPTR_0009s07520g [Populus trichocarpa]
Length = 116
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK FE ++ +Y
Sbjct: 60 GYKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAELANRPGQY 116
>ref|XP_007052503.1| DNA-directed RNA polymerase II subunit RPB11 [Theobroma cacao]
gi|508704764|gb|EOX96660.1| DNA-directed RNA polymerase
II subunit RPB11 [Theobroma cacao]
Length = 169
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFE 254
GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK FE
Sbjct: 60 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106
>ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Capsella rubella]
gi|482560776|gb|EOA24967.1| hypothetical protein
CARUB_v10018264mg [Capsella rubella]
Length = 116
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAI DLDKEL++LK FE ++K S +Y
Sbjct: 60 GYQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQY 116
>gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK47762.1| unknown
[Medicago truncatula]
Length = 116
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GYKLPHPLQYKII+RIHTTSQSSPMQAYNQ+I DLDKEL+ LK FE + K S++Y
Sbjct: 60 GYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAELLKFSKDY 116
>ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutrema salsugineum]
gi|557104965|gb|ESQ45299.1| hypothetical protein
EUTSA_v10010833mg [Eutrema salsugineum]
Length = 116
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = -3
Query: 394 GYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKEVFEEGMSKHSREY 224
GY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAI DLDKEL +LK FE ++K S +Y
Sbjct: 60 GYQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELEYLKNQFEAEVAKFSTQY 116