BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00010499
         (652 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...   301   2e-79
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   300   3e-79
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...   300   3e-79
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   299   4e-79
ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfam...   293   4e-77
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   290   3e-76
ref|XP_007216544.1| hypothetical protein PRUPE_ppb007734mg [Prun...   289   5e-76
ref|XP_002306741.1| pentatricopeptide repeat-containing family p...   287   2e-75
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis...   286   3e-75
ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phas...   277   2e-72
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   276   4e-72
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi...   272   6e-71
gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus...   272   7e-71
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   270   2e-70
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi...   270   3e-70
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ...   251   2e-64
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi...   244   2e-62
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   244   2e-62
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps...   240   3e-61
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar...   238   2e-60

>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 550

 Score =  301 bits (770), Expect = 2e-79
 Identities = 148/198 (74%), Positives = 168/198 (84%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           D P L MLEN CT M DL K+HA+LIKTGLA DT+AASR+LAFCA SPAGDINYAY VF 
Sbjct: 20  DKPHLFMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRVLAFCA-SPAGDINYAYMVFR 78

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
            I +PNLF WNTIIRGFS SS P+ AISLFIDML +S ++P RLTYPS+FKAYAQLGLAH
Sbjct: 79  HIHNPNLFIWNTIIRGFSNSSNPEAAISLFIDMLVTSTVQPQRLTYPSVFKAYAQLGLAH 138

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLA 57
           DG QLHGRV+KLGLE+D FVRNTII MY+NCG LSEA R+FDED +FD+VAWNSMIMGL+
Sbjct: 139 DGAQLHGRVVKLGLESDQFVRNTIIHMYSNCGLLSEARRVFDEDLEFDIVAWNSMIMGLS 198

Query: 56  KSGQVDDSRRLFDKMESK 3
           K G+V +SRRLFDKM  +
Sbjct: 199 KCGEVGESRRLFDKMPQR 216



 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 49/151 (32%), Positives = 81/151 (53%)
 Frame = -3

Query: 458 SPAGDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTY 279
           S  G++  +  +F ++   N  +WN++I G  ++     A+ LF +M Q   IKP   T 
Sbjct: 198 SKCGEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEALDLFGEM-QKQKIKPSEFTM 256

Query: 278 PSLFKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSD 99
            SL  A AQLG    G  +H  + K  ++ +P V   II MY+ CG + +A  +F+    
Sbjct: 257 VSLLNASAQLGAIRQGEWIHEYIRKNHIQLNPIVVTAIINMYSKCGSIEKAVHVFEAAPR 316

Query: 98  FDVVAWNSMIMGLAKSGQVDDSRRLFDKMES 6
             +  WNS+IMGLA +G  +++  LF +++S
Sbjct: 317 TGLSCWNSIIMGLATNGCEEEAIELFSRLKS 347


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Citrus sinensis]
          Length = 534

 Score =  300 bits (768), Expect = 3e-79
 Identities = 148/199 (74%), Positives = 172/199 (86%), Gaps = 1/199 (0%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           D P L++L+  CT+M DL K+HA+LIKTGLA+D IAASR+L FC TSPAGDINYAY VF+
Sbjct: 19  DQPLLSLLDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRILTFC-TSPAGDINYAYLVFT 77

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           QI+ PNLF WNTIIRGFSQSS P+NAI LFIDML +SPI+P RLTYPSLFKAYAQLGLA 
Sbjct: 78  QIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR 137

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDE-DSDFDVVAWNSMIMGL 60
           DG QLHGRV+K GLE D F+ NTII+MYANCGFLSEA  +FDE D++FDVVAWNSMI+GL
Sbjct: 138 DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL 197

Query: 59  AKSGQVDDSRRLFDKMESK 3
           AK G++D+SRRLFDKM S+
Sbjct: 198 AKCGEIDESRRLFDKMVSR 216



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 46/148 (31%), Positives = 78/148 (52%)
 Frame = -3

Query: 449 GDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSL 270
           G+I+ +  +F ++   N  +WN++I G+ ++   + A+ LF +M Q   IKP   T  SL
Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSL 259

Query: 269 FKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDV 90
             A A+LG    G  +H  ++    E +  V   II MY  CG    A ++F+      +
Sbjct: 260 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 319

Query: 89  VAWNSMIMGLAKSGQVDDSRRLFDKMES 6
             WNSM+ GLA +G  +++ +LF  ++S
Sbjct: 320 SCWNSMVFGLAMNGYENEAIKLFSGLQS 347


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
           gi|557539373|gb|ESR50417.1| hypothetical protein
           CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  300 bits (767), Expect = 3e-79
 Identities = 148/199 (74%), Positives = 172/199 (86%), Gaps = 1/199 (0%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           D P L++L+  CT+M DL K+HA+LIKTGL +D IAASR+LAFC TSPAGDINYAY VF+
Sbjct: 19  DQPLLSLLDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRILAFC-TSPAGDINYAYLVFT 77

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           QI+ PNLF WNTIIRGFSQSS P+NAI LFIDML +SPI+P RLTYPSLFKAYAQLGLA 
Sbjct: 78  QIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR 137

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDE-DSDFDVVAWNSMIMGL 60
           DG QLHGRV+K GLE D F+ NTII+MYANCGFLSEA  +FDE D++FDVVAWNSMI+GL
Sbjct: 138 DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEVDTEFDVVAWNSMIIGL 197

Query: 59  AKSGQVDDSRRLFDKMESK 3
           AK G++D+SRRLFDKM S+
Sbjct: 198 AKCGEIDESRRLFDKMVSR 216



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 46/148 (31%), Positives = 78/148 (52%)
 Frame = -3

Query: 449 GDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSL 270
           G+I+ +  +F ++   N  +WN++I G+ ++   + A+ LF +M Q   IKP   T  SL
Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSL 259

Query: 269 FKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDV 90
             A A+LG    G  +H  ++    E +  V   II MY  CG    A ++F+      +
Sbjct: 260 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 319

Query: 89  VAWNSMIMGLAKSGQVDDSRRLFDKMES 6
             WNSM+ GLA +G  +++ +LF  ++S
Sbjct: 320 SCWNSMVFGLAMNGYENEAIKLFSGLQS 347


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  299 bits (766), Expect = 4e-79
 Identities = 143/195 (73%), Positives = 167/195 (85%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           DHP L++LE  CTTM DL K+HA+L+KTGLA+  +A S +LAFCATSP GDINYAY VF+
Sbjct: 23  DHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFT 82

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           QI  PNLF+WNTIIRGFSQSS P +AISLFIDML  S ++PHRLTYPS+FKAYAQLGLAH
Sbjct: 83  QIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAH 142

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLA 57
            G QLHGRV+KLGL+ DPF+RNTII+MYANCGFLSE  + F E  DFD+VAWNSMIMGLA
Sbjct: 143 YGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLA 202

Query: 56  KSGQVDDSRRLFDKM 12
           K G+VD+SR+LFD+M
Sbjct: 203 KCGEVDESRKLFDEM 217



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 47/147 (31%), Positives = 82/147 (55%)
 Frame = -3

Query: 449 GDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSL 270
           G+++ +  +F ++   N  +WN++I G+ ++   + A+ LF  M Q   IKP   T  SL
Sbjct: 205 GEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQM-QEERIKPSEFTMVSL 263

Query: 269 FKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDV 90
             A A+LG    G  +H  + K   E +  V  +II MY  CG + EA ++F+      +
Sbjct: 264 LNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGL 323

Query: 89  VAWNSMIMGLAKSGQVDDSRRLFDKME 9
            +WN+MI+GLA +G  +++ +LF ++E
Sbjct: 324 SSWNTMILGLAMNGCENEAIQLFSRLE 350


>ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508701125|gb|EOX93021.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 538

 Score =  293 bits (749), Expect = 4e-77
 Identities = 147/199 (73%), Positives = 171/199 (85%), Gaps = 1/199 (0%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           D P L++LEN+CT+M DL KLHA LIKTGL  D IAASR+LAFC  SPAGD+NYAY VF+
Sbjct: 21  DQPYLSLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRVLAFCV-SPAGDMNYAYLVFT 79

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           QI++PNLFTWNTIIRGFSQSS PQ AISLFIDML  S I+P RLTYPS+FKAYAQLGLA 
Sbjct: 80  QIKNPNLFTWNTIIRGFSQSSNPQIAISLFIDMLVGSSIQPERLTYPSVFKAYAQLGLAC 139

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDED-SDFDVVAWNSMIMGL 60
           DG QLHGRV+KLGL+ D F+RNTII+MYANCG LSEA R+FDE+  + D+VAWNSMI+GL
Sbjct: 140 DGRQLHGRVIKLGLDYDQFIRNTIIYMYANCGLLSEAWRMFDEEHMELDIVAWNSMIIGL 199

Query: 59  AKSGQVDDSRRLFDKMESK 3
           AK G+VD+SRRLF+KM S+
Sbjct: 200 AKCGEVDESRRLFNKMVSR 218



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 50/148 (33%), Positives = 81/148 (54%)
 Frame = -3

Query: 449 GDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSL 270
           G+++ +  +F+++   N  +WN++I G+ ++     A+ LF +M Q   I+P   T  SL
Sbjct: 203 GEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEALELFQEM-QEEHIRPSEFTMVSL 261

Query: 269 FKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDV 90
             A A LG    G  +H  +LK   E +  V   II MY  CG   +A ++F       +
Sbjct: 262 LNACACLGAITQGKWIHDYILKQNFELNGIVVTAIIDMYCKCGNAEKALQVFTTSPKEGL 321

Query: 89  VAWNSMIMGLAKSGQVDDSRRLFDKMES 6
             WNSMI+GLA +G  +++R+LF K+ES
Sbjct: 322 SCWNSMILGLATNGCENEARQLFSKLES 349


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  290 bits (742), Expect = 3e-76
 Identities = 138/195 (70%), Positives = 167/195 (85%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           D   L+ML+ +CTTM DL K+H+ LIKTGLA+DT AASR+LAFCA SPAGDINYAY VF 
Sbjct: 21  DQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCA-SPAGDINYAYLVFV 79

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           QIQ+PN+F WNTIIRGFS+SS PQN+ISL+IDML +SP++P RLTYPS+FKA+AQL LA 
Sbjct: 80  QIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLAS 139

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLA 57
           +G QLHG+++KLGLE D F+RNTI+FMY NCGF SEA ++FD   DFD+VAWN+MIMG+A
Sbjct: 140 EGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVA 199

Query: 56  KSGQVDDSRRLFDKM 12
           K G VD+SRRLFDKM
Sbjct: 200 KCGLVDESRRLFDKM 214



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 51/169 (30%), Positives = 90/169 (53%)
 Frame = -3

Query: 512 GLARDTIAASRLLAFCATSPAGDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAIS 333
           G+  D +A + ++     +  G ++ +  +F ++   N  +WN++I G+ ++    +A+ 
Sbjct: 183 GMDFDIVAWNTMIM--GVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALE 240

Query: 332 LFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMY 153
           LF  M Q   I+P   T  SL  A A LG    G  +H  ++K   E +P V   II MY
Sbjct: 241 LFQKM-QVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMY 299

Query: 152 ANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMES 6
           + CG + +A ++F       +  WNSMI+GLA +GQ +++ +LF  ++S
Sbjct: 300 SKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQS 348


>ref|XP_007216544.1| hypothetical protein PRUPE_ppb007734mg [Prunus persica]
           gi|462412694|gb|EMJ17743.1| hypothetical protein
           PRUPE_ppb007734mg [Prunus persica]
          Length = 297

 Score =  289 bits (740), Expect = 5e-76
 Identities = 141/194 (72%), Positives = 165/194 (85%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           + P L+MLE  CT M DL K+HA+LIKTGL  DT+AASR+LAFCA SPAG+INYAY VF 
Sbjct: 20  ERPHLSMLEKQCTNMKDLQKIHAHLIKTGLVSDTVAASRVLAFCA-SPAGNINYAYMVFR 78

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
            IQ+PNLF WNTIIRGFS+S +P+ AISLFIDML +S I+PHRLTYPS+FKAYAQLGLA 
Sbjct: 79  NIQNPNLFIWNTIIRGFSESPSPEIAISLFIDMLVTSAIEPHRLTYPSVFKAYAQLGLAQ 138

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLA 57
           DG QLHGR+LKLGLE+D F+RNTII MYANCGFL EA R+FDED + D VAWNSMIMGL+
Sbjct: 139 DGAQLHGRILKLGLESDQFIRNTIIHMYANCGFLIEARRMFDEDLECDTVAWNSMIMGLS 198

Query: 56  KSGQVDDSRRLFDK 15
           K G+V +++RLFDK
Sbjct: 199 KWGEVSEAKRLFDK 212


>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222856190|gb|EEE93737.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 509

 Score =  287 bits (735), Expect = 2e-75
 Identities = 140/190 (73%), Positives = 164/190 (86%), Gaps = 1/190 (0%)
 Frame = -3

Query: 578 MLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFSQIQHPN 399
           ML+ +CT+M DL K+HA LIKTGLA+DTIAASR+LAFC TSPAGDINYAY VF+QI++PN
Sbjct: 1   MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFC-TSPAGDINYAYLVFTQIRNPN 59

Query: 398 LFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPI-KPHRLTYPSLFKAYAQLGLAHDGTQL 222
           LF WNTIIRGFSQSS P NAISLFIDM+ +SP  +P RLTYPS+FKAYAQLGLAH+G QL
Sbjct: 60  LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119

Query: 221 HGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQV 42
           HGRV+KLGLE D F++NTI+ MY NCGFL EA R+FD  + FDVV WN+MI+GLAK G++
Sbjct: 120 HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEI 179

Query: 41  DDSRRLFDKM 12
           D SRRLFDKM
Sbjct: 180 DKSRRLFDKM 189



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 50/148 (33%), Positives = 79/148 (53%)
 Frame = -3

Query: 449 GDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSL 270
           G+I+ +  +F ++   N  +WN++I G+ +      A+ LF  M Q   IKP   T  SL
Sbjct: 177 GEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRM-QEEGIKPSEFTMVSL 235

Query: 269 FKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDV 90
             A A LG    G  +H  ++K     +  V   II MY+ CG + +A ++F       +
Sbjct: 236 LNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGL 295

Query: 89  VAWNSMIMGLAKSGQVDDSRRLFDKMES 6
             WNS+I+GLA SG+ +++ RLF K+ES
Sbjct: 296 SCWNSLILGLAMSGRGNEAVRLFSKLES 323


>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
           gi|587904202|gb|EXB92403.1| hypothetical protein
           L484_021387 [Morus notabilis]
          Length = 530

 Score =  286 bits (733), Expect = 3e-75
 Identities = 144/195 (73%), Positives = 164/195 (84%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           D P L+MLE  C TM+DL K+HA+LIKTGL   TIA+SRLLAFCA SPAG+INYA  VFS
Sbjct: 25  DQPHLSMLEKRCATMSDLRKIHAHLIKTGLISHTIASSRLLAFCA-SPAGNINYALMVFS 83

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           QIQ+PNLF WNTIIRGFS+SS PQ AI LFIDML  SP++P RLTYPS+FKAYAQLGLA 
Sbjct: 84  QIQNPNLFIWNTIIRGFSRSSTPQTAIFLFIDMLVGSPLEPQRLTYPSVFKAYAQLGLAC 143

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLA 57
            G QLHGRV+KLGL+ D FVRNTII MY NCGFLSEA +LFDE S+ D+VAWNSMIMGL+
Sbjct: 144 FGAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESSELDLVAWNSMIMGLS 203

Query: 56  KSGQVDDSRRLFDKM 12
           K G+V +SRRLFD+M
Sbjct: 204 KCGEVGESRRLFDRM 218



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 48/151 (31%), Positives = 78/151 (51%)
 Frame = -3

Query: 458 SPAGDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTY 279
           S  G++  +  +F ++   N  +WN++I G+ ++     A+ LF  M Q   IK    T 
Sbjct: 203 SKCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKM-QGEGIKASEFTM 261

Query: 278 PSLFKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSD 99
            SL  A  +LG    G  +H  + K G+E +  V   II MY  CG +++A  +F     
Sbjct: 262 VSLLNASGRLGAIRQGEWIHEYITKNGIELNVIVVTAIIDMYCKCGSVNKALSVFKTAPK 321

Query: 98  FDVVAWNSMIMGLAKSGQVDDSRRLFDKMES 6
             +  WNSM+MGLA +G  +++  LF ++ES
Sbjct: 322 LGLSCWNSMVMGLAMNGCEEEALELFSRLES 352


>ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
           gi|561014990|gb|ESW13851.1| hypothetical protein
           PHAVU_008G231600g [Phaseolus vulgaris]
          Length = 525

 Score =  277 bits (709), Expect = 2e-72
 Identities = 137/198 (69%), Positives = 163/198 (82%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           DHPCLTML+N CT M DL K+H ++IKTGLA D IAASR+L FCA+S +GDINYAY VF+
Sbjct: 22  DHPCLTMLQNQCTNMKDLQKIHPHIIKTGLALDHIAASRVLTFCASS-SGDINYAYLVFT 80

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
            I +PNL+ WNTIIRGFS+SS PQ AISLF+DML S+ ++P RLTYPS+FKAYAQLG  H
Sbjct: 81  GIPNPNLYCWNTIIRGFSRSSTPQFAISLFVDMLYSA-VEPQRLTYPSVFKAYAQLGAGH 139

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLA 57
           DG QLHGRV+KLGLE D F+ NTI++MYAN G +SEA R+FDE  + DVVA NSMIMGLA
Sbjct: 140 DGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDEPLELDVVACNSMIMGLA 199

Query: 56  KSGQVDDSRRLFDKMESK 3
           K G+VD SRRLFD M ++
Sbjct: 200 KCGEVDKSRRLFDNMPTR 217



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 29/207 (14%)
 Frame = -3

Query: 539 KLHANLIKTGLARDTIAASRLLAFCATS-----------------------------PAG 447
           +LH  ++K GL +D   ++ +L   A S                               G
Sbjct: 143 QLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDEPLELDVVACNSMIMGLAKCG 202

Query: 446 DINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLF 267
           +++ +  +F  +      +WN++I G+ ++      + LF  M Q   ++P   T  SL 
Sbjct: 203 EVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLELFRKM-QEEGVEPSEFTMVSLL 261

Query: 266 KAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVV 87
            A A LG    G  +H  + +   + +  V   II MY  CG + +A  +F       + 
Sbjct: 262 SACAHLGALQHGEWVHDYIKRGNFKLNVIVLTAIIDMYCKCGSIEKAVEVFAASPTRGLP 321

Query: 86  AWNSMIMGLAKSGQVDDSRRLFDKMES 6
            WNS+I+GLA +G   ++   F K+ES
Sbjct: 322 CWNSIIIGLALNGHEREAIEYFSKLES 348


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
           gi|449530724|ref|XP_004172343.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  276 bits (706), Expect = 4e-72
 Identities = 130/198 (65%), Positives = 169/198 (85%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           + P L+M++  CTTM DL + HA+LIK+G A ++ AASR+LAFCA SP G+++YAY VF 
Sbjct: 23  NQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCA-SPLGNMDYAYLVFL 81

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           Q+Q+PNLF+WNT+IRGFSQSS PQ A+ LFIDML SS ++P RLTYPS+FKAY+QLGLAH
Sbjct: 82  QMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAH 141

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLA 57
           DG QLHGR++KLGL+ DPF+RNTI++MYA  GFLSEA R+F+++ +FDVV+WNSMI+GLA
Sbjct: 142 DGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLA 201

Query: 56  KSGQVDDSRRLFDKMESK 3
           K G++D+SR+LFDKM  K
Sbjct: 202 KCGEIDESRKLFDKMPVK 219



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 29/207 (14%)
 Frame = -3

Query: 539 KLHANLIKTGLARDTIAASRLLAFCAT-----------------------------SPAG 447
           +LH  +IK GL  D    + +L   AT                             +  G
Sbjct: 145 QLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCG 204

Query: 446 DINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLF 267
           +I+ +  +F ++   N  +WN++I G+ ++   + A+ LFI M Q   I+P   T  SL 
Sbjct: 205 EIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKM-QEERIQPSEFTMVSLL 263

Query: 266 KAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVV 87
            A AQ+G    G  +H  + K  L+ +  V   II MY  CG +  A ++F++     + 
Sbjct: 264 NASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLS 323

Query: 86  AWNSMIMGLAKSGQVDDSRRLFDKMES 6
           +WNSMI GLA +G   ++  +F  +ES
Sbjct: 324 SWNSMIFGLAVNGCEKEAILVFKMLES 350


>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum tuberosum]
          Length = 522

 Score =  272 bits (696), Expect = 6e-71
 Identities = 133/199 (66%), Positives = 163/199 (81%), Gaps = 1/199 (0%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPA-GDINYAYSVF 420
           D P L MLE  CTTM DL K+HA+LIK+GL +D IA+SR+LAF A SP  GDINYA  VF
Sbjct: 17  DQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIASSRVLAFSAKSPPIGDINYANLVF 76

Query: 419 SQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLA 240
           + I++PNLFTWNTIIRGFS+SS PQ AI LFI+ML +S ++PH LTYPS+FKAYA+ GL 
Sbjct: 77  THIENPNLFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGLV 136

Query: 239 HDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGL 60
            +G QLHGR++KLGLE D F+RNT+++MYA+CGFL EA +LFDED   DVV+WNSMIMGL
Sbjct: 137 KNGAQLHGRIIKLGLEFDTFIRNTMLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIMGL 196

Query: 59  AKSGQVDDSRRLFDKMESK 3
           AKSG++DDS RLF KM ++
Sbjct: 197 AKSGEIDDSWRLFSKMSTR 215



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
 Frame = -3

Query: 539 KLHANLIKTGLARDTIAASRLLAFCAT-----------------------------SPAG 447
           +LH  +IK GL  DT   + +L   A+                             + +G
Sbjct: 141 QLHGRIIKLGLEFDTFIRNTMLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIMGLAKSG 200

Query: 446 DINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLF 267
           +I+ ++ +FS++   N  +WN++I GF ++     A+ LF  M Q   IKP   T  SL 
Sbjct: 201 EIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEALELFSTM-QEENIKPSEFTLVSLL 259

Query: 266 KAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVV 87
            A   LG    G  ++  V K  +E +  V   II MY  CG +  A  +F   S+  + 
Sbjct: 260 NACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCKCGNVEMAWHVFISISNKGLS 319

Query: 86  AWNSMIMGLAKSGQVDDSRRLFDKME 9
           +WNSMI+GLA +G  DD+ +LF +++
Sbjct: 320 SWNSMILGLATNGFEDDAIKLFARLQ 345


>gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus guttatus]
          Length = 505

 Score =  272 bits (695), Expect = 7e-71
 Identities = 132/196 (67%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCAT-SPAGDINYAYSVF 420
           D P L++LE +C T+ DL K+HA LIKTGLA+DTIA SR+LAFCA   PA D++YA+SVF
Sbjct: 4   DQPFLSLLETNCHTIKDLTKIHAQLIKTGLAKDTIAVSRILAFCAAPGPARDLDYAFSVF 63

Query: 419 SQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLA 240
           S I+ PNLFTWNTIIRGF QSS P  AISLF+DML +S ++P  LTYPS+FKAY QLGLA
Sbjct: 64  SHIEKPNLFTWNTIIRGFCQSSHPHVAISLFVDMLTNSTLEPENLTYPSVFKAYTQLGLA 123

Query: 239 HDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGL 60
            DG QLHGR++KLG E DPF+RN+II MYA+CG    A +LFDED D DVVAWNSM+MGL
Sbjct: 124 GDGAQLHGRIIKLGFEHDPFIRNSIIHMYADCGLFGSARKLFDEDEDTDVVAWNSMVMGL 183

Query: 59  AKSGQVDDSRRLFDKM 12
           AK G+VD+S RLF K+
Sbjct: 184 AKCGEVDESWRLFCKI 199



 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
 Frame = -3

Query: 449 GDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSL 270
           G+++ ++ +F +I   N  +WNT+I G+ ++    +A+SLF +M Q   I+P   T  S+
Sbjct: 187 GEVDESWRLFCKIPCRNDISWNTMISGYVRNGKWVDALSLFAEM-QQRQIRPSEFTLVSM 245

Query: 269 FKAYAQLGLAHDGTQLHGRVLKL---GLETDPFVRNTIIFMYANCGFLSEASRLFDEDSD 99
             A A+LG    G  +H  + K     ++ +  V   II MY  CG +  A  +F+    
Sbjct: 246 LNACAKLGALEQGKWIHRYIKKSDINNIDRNTIVVTAIIDMYCKCGDIKTAREVFESTPQ 305

Query: 98  FDVVAWNSMIMGLAKSGQVDDSRRLFDKME 9
             +  WNSMI+GLA +G  +++ +LF ++E
Sbjct: 306 KALSGWNSMILGLATNGFEEEAFQLFTELE 335


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  270 bits (691), Expect = 2e-70
 Identities = 136/198 (68%), Positives = 160/198 (80%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           D PCLTML+  CT M DL K+HA++IKTGLA  T+AASR+L FCA+S +GDINYAY +F+
Sbjct: 24  DQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASS-SGDINYAYLLFT 82

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
            I  PNL+ WNTIIRGFS+SS P  AISLF+DML SS + P RLTYPS+FKAYAQLG  +
Sbjct: 83  TIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSS-VLPQRLTYPSVFKAYAQLGAGY 141

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLA 57
           DG QLHGRV+KLGLE D F++NTII+MYAN G LSEA R+FDE  D DVVA NSMIMGLA
Sbjct: 142 DGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLA 201

Query: 56  KSGQVDDSRRLFDKMESK 3
           K G+VD SRRLFD M ++
Sbjct: 202 KCGEVDKSRRLFDNMPTR 219



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 47/165 (28%), Positives = 79/165 (47%)
 Frame = -3

Query: 500 DTIAASRLLAFCATSPAGDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFID 321
           D +A + ++   A    G+++ +  +F  +      TWN++I G+ ++     A+ LF  
Sbjct: 189 DVVACNSMIMGLAK--CGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRK 246

Query: 320 MLQSSPIKPHRLTYPSLFKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCG 141
           M Q   ++P   T  SL  A A LG    G  +H  V +   E +  V   II MY  CG
Sbjct: 247 M-QGERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCG 305

Query: 140 FLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMES 6
            + +A  +F+      +  WNS+I+GLA +G    +   F K+E+
Sbjct: 306 VIVKAIEVFEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEA 350


>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum lycopersicum]
          Length = 522

 Score =  270 bits (690), Expect = 3e-70
 Identities = 132/199 (66%), Positives = 163/199 (81%), Gaps = 1/199 (0%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPA-GDINYAYSVF 420
           D P L MLE  CTTM DL K+HA+LIK+GL +D IAASR+LAF A SP  GDINYA  VF
Sbjct: 17  DQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIAASRVLAFSAKSPPIGDINYANLVF 76

Query: 419 SQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLA 240
           + I++PN FTWNTIIRGFS+SS PQ AI LFI+ML +S ++PH LTYPS+FKAYA+ G+A
Sbjct: 77  THIENPNPFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPSVFKAYARGGIA 136

Query: 239 HDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGL 60
            +G QLHGR++KLGLE D F+RNT+++MYA+CGFL EA +LFDED   DVV+WNSMI+GL
Sbjct: 137 KNGAQLHGRIMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGL 196

Query: 59  AKSGQVDDSRRLFDKMESK 3
           AKSG++DDS RLF KM ++
Sbjct: 197 AKSGEIDDSWRLFSKMPTR 215



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
 Frame = -3

Query: 539 KLHANLIKTGLARDTIAASRLLAFCAT-----------------------------SPAG 447
           +LH  ++K GL  DT   + LL   A+                             + +G
Sbjct: 141 QLHGRIMKLGLEFDTFIRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGLAKSG 200

Query: 446 DINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLF 267
           +I+ ++ +FS++   N  +WN++I GF ++     A+ LF  M Q   +KP   T  SL 
Sbjct: 201 EIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEALELFSTM-QEENVKPSEFTLVSLL 259

Query: 266 KAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVV 87
            A   LG    G  ++  V K  +E +  V   II MY  C  +  A  +F   S+  + 
Sbjct: 260 NACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDMYCKCANVEMAWHVFVSSSNKGLS 319

Query: 86  AWNSMIMGLAKSGQVDDSRRLFDKME 9
           +WNSMI+GLA +G  DD+ +LF +++
Sbjct: 320 SWNSMILGLATNGFEDDAIKLFARLQ 345


>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325851|gb|EFH56271.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 542

 Score =  251 bits (640), Expect = 2e-64
 Identities = 125/196 (63%), Positives = 153/196 (78%), Gaps = 1/196 (0%)
 Frame = -3

Query: 587 CLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFSQIQ 408
           CL +++  C+TM +L ++HANLIKTGL  DT+AASR+LAFC  SP+ D NYAY VF++I 
Sbjct: 27  CLRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPS-DRNYAYLVFTRIN 85

Query: 407 HPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSP-IKPHRLTYPSLFKAYAQLGLAHDG 231
           H N F WNTIIRGFS+SS P+ AIS+FIDML SSP +KP RLTYPS+FKAYA LGLA DG
Sbjct: 86  HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDG 145

Query: 230 TQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKS 51
            QLHGRV+K GLE D F+RNT++ MY  CG L EA RLF     FDVVAWNS+IMGLAK 
Sbjct: 146 RQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKC 205

Query: 50  GQVDDSRRLFDKMESK 3
           G +D +++LFD+M  +
Sbjct: 206 GLIDQAQKLFDEMPQR 221



 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
 Frame = -3

Query: 548 DLHKLHANLIKTGLARDTIAASRLLAFCAT-----------------------------S 456
           D  +LH  +IK GL  D+   + +L    T                             +
Sbjct: 144 DGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLA 203

Query: 455 PAGDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYP 276
             G I+ A  +F ++   N  +WN++I GF ++   ++A+ +F +M Q   +KP   T  
Sbjct: 204 KCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREM-QERDVKPDGFTMV 262

Query: 275 SLFKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDF 96
           SL  A A LG +  G  +H  +++   E +  V   +I MY  CG   E  ++F+     
Sbjct: 263 SLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTK 322

Query: 95  DVVAWNSMIMGLAKSGQVDDSRRLFDKME 9
            +  WNSMI+GLA +G  + +  LF ++E
Sbjct: 323 QLSCWNSMILGLANNGCEERAMDLFLELE 351


>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cicer arietinum]
          Length = 536

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/196 (60%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           D PCLTML+N CTT+   H ++ ++IKTGL  + IA++R+L FCA SP+G+INYAY +F+
Sbjct: 24  DQPCLTMLQNHCTTLKHFHMIYPHIIKTGLTHNPIASTRVLTFCA-SPSGNINYAYKLFA 82

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           ++ +PNL++WNTIIR FS+SS PQ AISLF+DML S  I+P  LTYPS+FKAYAQL    
Sbjct: 83  RMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQ-IQPQHLTYPSVFKAYAQLSAGD 141

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDF-DVVAWNSMIMGL 60
            G+QLHG V+KLGL+ D F+ NTII+MYAN G LSEA R+FDE  +  DVVA+NSMIMG 
Sbjct: 142 YGSQLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAKRVFDEKLELGDVVAFNSMIMGF 201

Query: 59  AKSGQVDDSRRLFDKM 12
           AK G++D++R+LFD+M
Sbjct: 202 AKCGEIDEARKLFDEM 217



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 30/207 (14%)
 Frame = -3

Query: 539 KLHANLIKTGLARDTIAASRLLAFCATS------------------------------PA 450
           +LH  ++K GL RD    + ++   A S                                
Sbjct: 145 QLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAKRVFDEKLELGDVVAFNSMIMGFAKC 204

Query: 449 GDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSL 270
           G+I+ A  +F ++      TWN++I G+ ++     A+ LF  M     ++P   T  SL
Sbjct: 205 GEIDEARKLFDEMFTRTSVTWNSMISGYVRNGKLMEALELFHKMQLEERVEPSEFTMVSL 264

Query: 269 FKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDV 90
             A A LG    G  +H  + +   E +  V   II MY  CG +  A ++FD      +
Sbjct: 265 LNACAHLGALQHGKWVHDYIKRNDFELNVIVLTAIIDMYCKCGSVENAIQVFDTYPGRGL 324

Query: 89  VAWNSMIMGLAKSGQVDDSRRLFDKME 9
             WNS+I+GLA +G   ++   F ++E
Sbjct: 325 SCWNSIIIGLAMNGHEREAFEFFSELE 351


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  244 bits (622), Expect = 2e-62
 Identities = 124/199 (62%), Positives = 156/199 (78%), Gaps = 4/199 (2%)
 Frame = -3

Query: 596 DHPCLTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFS 417
           +HPCLTML+N CTT+   H+++ ++IKTGL  + IA++R L FCA SP+G+INYAY +F 
Sbjct: 27  NHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCA-SPSGNINYAYKLFV 85

Query: 416 QIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSLFKAYAQLGLAH 237
           ++ +PNL++WNTIIR FS+SS PQ AISLF+DML S  I+P  LTYPS+FKAYAQLG AH
Sbjct: 86  RMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQ-IQPQYLTYPSVFKAYAQLGHAH 144

Query: 236 DGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFD----EDSDFDVVAWNSMI 69
            G QLHGRV+KLGL+ D F+ NTII+MYAN G +SEA R+FD    E  D DVVA NSMI
Sbjct: 145 YGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMI 204

Query: 68  MGLAKSGQVDDSRRLFDKM 12
           MG AK G++D+SR LFD M
Sbjct: 205 MGYAKCGEIDESRNLFDDM 223



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 42/148 (28%), Positives = 72/148 (48%)
 Frame = -3

Query: 449 GDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYPSL 270
           G+I+ + ++F  +      +WN++I G+ ++     A+ LF + +Q    +    T  SL
Sbjct: 211 GEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELF-NKMQVEGFEVSEFTMVSL 269

Query: 269 FKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDV 90
             A A LG    G  +H  + +   E +  V   II MY  CG +  A  +F+      +
Sbjct: 270 LNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGL 329

Query: 89  VAWNSMIMGLAKSGQVDDSRRLFDKMES 6
             WNS+I+GLA +G   ++   F K+ES
Sbjct: 330 SCWNSIIIGLAMNGHEREAFEFFSKLES 357


>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
           gi|565472276|ref|XP_006293940.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562647|gb|EOA26837.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562648|gb|EOA26838.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
          Length = 555

 Score =  240 bits (612), Expect = 3e-61
 Identities = 121/192 (63%), Positives = 149/192 (77%), Gaps = 1/192 (0%)
 Frame = -3

Query: 584 LTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFSQIQH 405
           L +++  C+TM +L ++H NLIKTGL  DT+AASR+LAFC  SP+ D+NYAY VF++I H
Sbjct: 23  LRLIDTQCSTMRELKQIHGNLIKTGLISDTVAASRVLAFCCASPS-DMNYAYLVFTRINH 81

Query: 404 PNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSP-IKPHRLTYPSLFKAYAQLGLAHDGT 228
            N F WNTIIRGFSQSS P+ AIS+FIDML SSP +KP  LTYPS+FKAY +LG A DG 
Sbjct: 82  KNPFVWNTIIRGFSQSSFPEMAISIFIDMLCSSPSVKPQNLTYPSVFKAYGRLGQAIDGR 141

Query: 227 QLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSG 48
           QLHGRVLK GLE D F+RNT++ MY   G L EA R+F   +DFDVVAWNSMIMGLAK G
Sbjct: 142 QLHGRVLKEGLEDDSFIRNTMLQMYVTSGCLVEAWRIFVGMTDFDVVAWNSMIMGLAKCG 201

Query: 47  QVDDSRRLFDKM 12
            +  +++LFD+M
Sbjct: 202 LISQAQQLFDEM 213



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
 Frame = -3

Query: 548 DLHKLHANLIKTGLARDTIAASRLLAFCATS----------------------------- 456
           D  +LH  ++K GL  D+   + +L    TS                             
Sbjct: 139 DGRQLHGRVLKEGLEDDSFIRNTMLQMYVTSGCLVEAWRIFVGMTDFDVVAWNSMIMGLA 198

Query: 455 PAGDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYP 276
             G I+ A  +F ++ H N  +WN++I GF ++   ++A+ +F +M Q   +KP   T  
Sbjct: 199 KCGLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDALEMFREM-QERNVKPDGFTMV 257

Query: 275 SLFKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDF 96
           SL  A A LG    G  +H  + +   E +  V   +I MY  CG + E  ++F+     
Sbjct: 258 SLLNACAYLGANEQGRWIHEYIARNRFELNSIVITALIEMYCKCGCIEEGLKVFECAPKK 317

Query: 95  DVVAWNSMIMGLAKSGQVDDSRRLFDKME 9
            +  WNSMI+GLA +G  + +  LF ++E
Sbjct: 318 QLSCWNSMILGLANNGCEERAMDLFLELE 346


>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g42920, chloroplastic; Flags: Precursor
           gi|4512663|gb|AAD21717.1| hypothetical protein
           [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110738441|dbj|BAF01146.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  238 bits (606), Expect = 2e-60
 Identities = 118/195 (60%), Positives = 148/195 (75%), Gaps = 1/195 (0%)
 Frame = -3

Query: 584 LTMLENSCTTMADLHKLHANLIKTGLARDTIAASRLLAFCATSPAGDINYAYSVFSQIQH 405
           L +++  C+TM +L ++HA+LIKTGL  DT+ ASR+LAFC  SP+ D+NYAY VF++I H
Sbjct: 28  LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINH 86

Query: 404 PNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSP-IKPHRLTYPSLFKAYAQLGLAHDGT 228
            N F WNTIIRGFS+SS P+ AIS+FIDML SSP +KP RLTYPS+FKAY +LG A DG 
Sbjct: 87  KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146

Query: 227 QLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSG 48
           QLHG V+K GLE D F+RNT++ MY  CG L EA R+F     FDVVAWNSMIMG AK G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206

Query: 47  QVDDSRRLFDKMESK 3
            +D ++ LFD+M  +
Sbjct: 207 LIDQAQNLFDEMPQR 221



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
 Frame = -3

Query: 548 DLHKLHANLIKTGLARDTIAASRLLAFCAT-----------------------------S 456
           D  +LH  +IK GL  D+   + +L    T                             +
Sbjct: 144 DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203

Query: 455 PAGDINYAYSVFSQIQHPNLFTWNTIIRGFSQSSAPQNAISLFIDMLQSSPIKPHRLTYP 276
             G I+ A ++F ++   N  +WN++I GF ++   ++A+ +F +M Q   +KP   T  
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM-QEKDVKPDGFTMV 262

Query: 275 SLFKAYAQLGLAHDGTQLHGRVLKLGLETDPFVRNTIIFMYANCGFLSEASRLFDEDSDF 96
           SL  A A LG +  G  +H  +++   E +  V   +I MY  CG + E   +F+     
Sbjct: 263 SLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK 322

Query: 95  DVVAWNSMIMGLAKSGQVDDSRRLFDKME 9
            +  WNSMI+GLA +G  + +  LF ++E
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELE 351