BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00009601
         (1349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   489   e-135
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              489   e-135
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   473   e-130
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   470   e-130
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   470   e-130
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   470   e-130
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   464   e-128
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [...   464   e-128
ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF,...   462   e-127
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   461   e-127
ref|XP_006577030.1| PREDICTED: RNA polymerase sigma factor sigF,...   455   e-125
ref|XP_006577029.1| PREDICTED: RNA polymerase sigma factor sigF,...   455   e-125
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...   452   e-124
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   452   e-124
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...   452   e-124
ref|XP_007162766.1| hypothetical protein PHAVU_001G178600g [Phas...   451   e-124
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,...   446   e-122
ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF,...   442   e-121
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus...   437   e-120
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,...   437   e-120

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  489 bits (1259), Expect = e-135
 Identities = 240/342 (70%), Positives = 285/342 (83%), Gaps = 1/342 (0%)
 Frame = -3

Query: 1221 PKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTR 1042
            PK  VHE    R+ ++QRKIN G+D  DPLRLFL G ETR+LL+AKEE EL V+I+ L R
Sbjct: 231  PKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMR 290

Query: 1041 LEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQ 862
            LEEVK RLQS   REPT+VEWA+A G+SC +LQS LH GNRSR+K+  AN R+VVH+AKQ
Sbjct: 291  LEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQ 350

Query: 861  YQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLP 682
            YQGRGLNLQDL+QEGSMGLM S+EKFKP AGCRF++YAYWWIRQ++RKAIFQ+SRTIRLP
Sbjct: 351  YQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLP 410

Query: 681  ENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWA 505
            EN+YSLL +VK AK L+IQE HH PT EE+A RVGI +EKL+ LL  TRMPLSMQQPVWA
Sbjct: 411  ENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWA 470

Query: 504  DQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSL 325
            DQ+TTFQE+TAD+G+EIP++ V K+LMR HV NLL +L PKERRIIRLRFGI DG P++L
Sbjct: 471  DQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTL 530

Query: 324  SQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            S+IG VFG +KERVRQLE RAL KL++CLS  GL +Y  LL+
Sbjct: 531  SEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 572


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  489 bits (1259), Expect = e-135
 Identities = 240/342 (70%), Positives = 285/342 (83%), Gaps = 1/342 (0%)
 Frame = -3

Query: 1221 PKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTR 1042
            PK  VHE    R+ ++QRKIN G+D  DPLRLFL G ETR+LL+AKEE EL V+I+ L R
Sbjct: 220  PKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMR 279

Query: 1041 LEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQ 862
            LEEVK RLQS   REPT+VEWA+A G+SC +LQS LH GNRSR+K+  AN R+VVH+AKQ
Sbjct: 280  LEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQ 339

Query: 861  YQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLP 682
            YQGRGLNLQDL+QEGSMGLM S+EKFKP AGCRF++YAYWWIRQ++RKAIFQ+SRTIRLP
Sbjct: 340  YQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLP 399

Query: 681  ENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWA 505
            EN+YSLL +VK AK L+IQE HH PT EE+A RVGI +EKL+ LL  TRMPLSMQQPVWA
Sbjct: 400  ENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWA 459

Query: 504  DQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSL 325
            DQ+TTFQE+TAD+G+EIP++ V K+LMR HV NLL +L PKERRIIRLRFGI DG P++L
Sbjct: 460  DQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTL 519

Query: 324  SQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            S+IG VFG +KERVRQLE RAL KL++CLS  GL +Y  LL+
Sbjct: 520  SEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 561


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
            gi|462400636|gb|EMJ06193.1| hypothetical protein
            PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  473 bits (1216), Expect = e-130
 Identities = 239/344 (69%), Positives = 284/344 (82%), Gaps = 1/344 (0%)
 Frame = -3

Query: 1227 PKPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKAL 1048
            PK K I HE+ S    D+++KI+ GF+ NDPLRLFL G ETRQLL+AKEE EL   ++ L
Sbjct: 225  PKSKVIGHESNSFTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDL 284

Query: 1047 TRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVA 868
             +LEEVK RLQ+QF REPTL+EWA+A G+SC IL+S L  G  SREK+  AN R+VVH+A
Sbjct: 285  FKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIA 344

Query: 867  KQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 688
            KQYQGRGL LQDLMQEGSMGLMKS+EKFKPQAGCRF+TYAYWWIRQ++RKAIFQ+SRTIR
Sbjct: 345  KQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIR 404

Query: 687  LPENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPV 511
            LPENVYSLL +V  AK   IQE  H+P  EELA RVGI VEKLE LL++TRMPLSMQQPV
Sbjct: 405  LPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPV 464

Query: 510  WADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPK 331
            WADQ+TTFQE+TAD+GVEIP++ V K+LMR HV +LLSIL  +ER IIRLR+GIEDG+ +
Sbjct: 465  WADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQR 524

Query: 330  SLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            SLS+IG +FG++KERVRQLESRA  KLR+ L  +GLGAY  LL+
Sbjct: 525  SLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 568


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 561

 Score =  470 bits (1210), Expect = e-130
 Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
            KPK   HET + RK  +++K++ GFD+NDPLRLFL G ETR+LL+A EE EL  +I+ L 
Sbjct: 219  KPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 278

Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
            RLE+ K +LQSQF REPTL+EWA A G+SC  L+S LH GN SREK+  AN RLVVHVAK
Sbjct: 279  RLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 338

Query: 864  QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
            QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 339  QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 398

Query: 684  PENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
            PEN+Y+LL +V  AK LYIQE  H P  E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 399  PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 458

Query: 507  ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
            ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 459  ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 518

Query: 327  LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            LS++G++FG++KERVRQLESRAL +L++ L  +    YA LLI
Sbjct: 519  LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 561


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 569

 Score =  470 bits (1210), Expect = e-130
 Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
            KPK   HET + RK  +++K++ GFD+NDPLRLFL G ETR+LL+A EE EL  +I+ L 
Sbjct: 227  KPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 286

Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
            RLE+ K +LQSQF REPTL+EWA A G+SC  L+S LH GN SREK+  AN RLVVHVAK
Sbjct: 287  RLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 346

Query: 864  QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
            QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 347  QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 406

Query: 684  PENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
            PEN+Y+LL +V  AK LYIQE  H P  E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 407  PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 466

Query: 507  ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
            ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 467  ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 526

Query: 327  LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            LS++G++FG++KERVRQLESRAL +L++ L  +    YA LLI
Sbjct: 527  LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 569


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 570

 Score =  470 bits (1210), Expect = e-130
 Identities = 235/343 (68%), Positives = 284/343 (82%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
            KPK   HET + RK  +++K++ GFD+NDPLRLFL G ETR+LL+A EE EL  +I+ L 
Sbjct: 228  KPKVTNHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 287

Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
            RLE+ K +LQSQF REPTL+EWA A G+SC  L+S LH GN SREK+  AN RLVVHVAK
Sbjct: 288  RLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 347

Query: 864  QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
            QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 348  QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 407

Query: 684  PENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
            PEN+Y+LL +V  AK LYIQE  H P  E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 408  PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 467

Query: 507  ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
            ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 468  ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 527

Query: 327  LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            LS++G++FG++KERVRQLESRAL +L++ L  +    YA LLI
Sbjct: 528  LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 570


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 548

 Score =  464 bits (1195), Expect = e-128
 Identities = 246/383 (64%), Positives = 290/383 (75%), Gaps = 1/383 (0%)
 Frame = -3

Query: 1344 DEFFTGLESTSLAIEAPLEKEIXXXXXXXXXXXXXXXXVPKPKAIVHETPSLRKVDIQRK 1165
            D   TGLE T L+    LE+                  V K K I HE  S R+  +Q+K
Sbjct: 167  DTVSTGLEPTDLS-NFSLEEVKTVRSTRRLERQSKNRRVTKTKEIFHEPYSSRRAGVQKK 225

Query: 1164 INMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVKVRLQSQFNREPTLV 985
            IN GFD  DPLRLFL G ET+QLL+AKEE EL  +++ L  LE VK + + QF R+PTLV
Sbjct: 226  INEGFDPKDPLRLFLWGPETKQLLTAKEESELIGQVQDLMSLENVKEKFKLQFGRDPTLV 285

Query: 984  EWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRGLNLQDLMQEGSMGL 805
            EWADA G+S S++QS LH GNRSREK+  AN R+VVH+AKQYQGRGL+LQDL+QEGSMGL
Sbjct: 286  EWADAVGLSYSVMQSQLHSGNRSREKLINANLRMVVHIAKQYQGRGLSLQDLLQEGSMGL 345

Query: 804  MKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYSLLRQVKNAKNLYIQ 625
            MKSIEKFKPQ GCRF+TYAYWWIRQ++RKAIFQ+SRTIRLPENVY  L +V  AK  YI 
Sbjct: 346  MKSIEKFKPQVGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYHTLGKVSEAKRSYIM 405

Query: 624  E-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTTFQEITADSGVEIPE 448
            E  H+PT EELA R+GI   +LE LL+  RMPLSMQQ VWADQ TTFQEITAD  VEIPE
Sbjct: 406  EGNHNPTKEELAKRIGITTVRLERLLYMARMPLSMQQTVWADQETTFQEITADIEVEIPE 465

Query: 447  LYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGSVFGITKERVRQLES 268
            L V K+LMR HV +LL+IL P+ER+IIRLR+GIEDG+ KSLS+IGSVFG++KERVRQLES
Sbjct: 466  LCVAKQLMRKHVLSLLNILNPRERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLES 525

Query: 267  RALDKLRKCLSREGLGAYAGLLI 199
            RAL KL++CL+  GL AYA LL+
Sbjct: 526  RALYKLKQCLASHGLEAYADLLV 548


>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
            gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
            rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  464 bits (1194), Expect = e-128
 Identities = 226/343 (65%), Positives = 287/343 (83%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
            +PK  + ET S R+ D++RK++ GFD NDPLRLFL G ET+QLL+AKEE EL  +++ L 
Sbjct: 226  QPKVTIRETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLM 285

Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
            RLE+VK +LQSQF REPTLVEWA+A G+ CS LQ+ LH GN SR+K+  AN R+VVH+AK
Sbjct: 286  RLEKVKSKLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHIAK 345

Query: 864  QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
            QYQ RGL+LQDL+QEGSMGLMKS+E+FKPQ GCRF+TYAYWWIRQ+IRK+I Q+SRT+RL
Sbjct: 346  QYQSRGLSLQDLLQEGSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSRTVRL 405

Query: 684  PENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
            PENV++LL +V +AK  YI+E +H P+ EELA RVGI VEKL+ LLF+TRMPLSMQQ VW
Sbjct: 406  PENVHTLLSKVLDAKKSYIREGNHCPSKEELARRVGITVEKLDKLLFTTRMPLSMQQSVW 465

Query: 507  ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
             DQ+ TFQE+T D+G+EIP++ V K+LMR HV NLLS+L P+ER II+LRFGIE+ +  S
Sbjct: 466  VDQDITFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSVLSPRERTIIKLRFGIEESKENS 525

Query: 327  LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            LS+IG++FG++KERVRQLESRAL KL++CL++ GLGAY  LL+
Sbjct: 526  LSEIGNMFGLSKERVRQLESRALYKLKQCLNKHGLGAYVDLLV 568


>ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Glycine max]
          Length = 554

 Score =  462 bits (1188), Expect = e-127
 Identities = 240/389 (61%), Positives = 295/389 (75%), Gaps = 7/389 (1%)
 Frame = -3

Query: 1344 DEFFTGLESTSLAIEAPLEKEIXXXXXXXXXXXXXXXXVPKPKAIVHETPSLRKVDIQRK 1165
            D   +GL STSL  ++ L+K                    K K +  E+   RK D+QR+
Sbjct: 167  DPLPSGLASTSLT-DSSLKKNKVVRSTRIIERLSKQRKSSKSKFLDEESYLERKSDVQRR 225

Query: 1164 INM------GFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVKVRLQSQFN 1003
            + +      G+D NDPLRLFLSG E+RQLL+ +EE +L  +++ L+RLEEVK+RLQ+Q  
Sbjct: 226  LRLEKKLKEGYDPNDPLRLFLSGPESRQLLTREEESQLITQLQDLSRLEEVKIRLQTQLR 285

Query: 1002 REPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRGLNLQDLMQ 823
            REPTL EWADA G SC  LQ+ LH  NRS+EK+  AN R+VVH+AK YQGRGL+LQDL Q
Sbjct: 286  REPTLAEWADAVGHSCYALQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQ 345

Query: 822  EGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYSLLRQVKNA 643
            EGS GLMKSIEKFKP+AGCRF TYAYWWIR ++RKAIF +SRTIRLPEN+Y+LL +V  A
Sbjct: 346  EGSTGLMKSIEKFKPEAGCRFGTYAYWWIRHAVRKAIFLHSRTIRLPENLYTLLGKVIEA 405

Query: 642  KNLYIQERH-HPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTTFQEITADS 466
            K  YIQE + HPT EELA +VGI +EK+++LLF++R P+SMQQ VWADQ+TTFQEITADS
Sbjct: 406  KKSYIQEGNLHPTKEELARKVGITIEKMDNLLFASRNPISMQQTVWADQDTTFQEITADS 465

Query: 465  GVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGSVFGITKER 286
             +EIP++ V+K+LMR HVHNLL+IL PKER IIRLRFGIEDGE K+LS IG VFG+TKER
Sbjct: 466  AIEIPDVTVSKQLMRMHVHNLLNILSPKERGIIRLRFGIEDGEEKTLSDIGKVFGLTKER 525

Query: 285  VRQLESRALDKLRKCLSREGLGAYAGLLI 199
            VRQLESRAL KLR+CL  +GL AY  LL+
Sbjct: 526  VRQLESRALLKLRQCLESQGLDAYTDLLV 554


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
            gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
            FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  461 bits (1185), Expect = e-127
 Identities = 232/343 (67%), Positives = 278/343 (81%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1227 PKPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKAL 1048
            PK K ++ ET   +  D+Q++++ GFD NDPLRLFL G ET+QLL+AKEE EL  +I+ L
Sbjct: 192  PKTKDLIFETYDSKSADVQKRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDL 251

Query: 1047 TRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVA 868
              LE VK RL+SQF REPTLVEWA A G+SC +L+  LH GNRSREK+  AN R+VVH+A
Sbjct: 252  MNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVHIA 311

Query: 867  KQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 688
            K+YQ RGL LQDL+QEG++GLMKSIEKFKPQAGCRF+TYAYWWIRQ+I KAIFQ+SRTIR
Sbjct: 312  KRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIR 371

Query: 687  LPENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPV 511
            LPENVY LL +V  AK  YIQE  H PT EE+A RVGI ++KLE LL  TR PLSMQQ V
Sbjct: 372  LPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIAIDKLEKLLCFTRTPLSMQQTV 431

Query: 510  WADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPK 331
            W+DQNTTFQEITAD+ +EIP++ V K+LMR H+  LL+IL  KERRIIRLRFGIEDG+ K
Sbjct: 432  WSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNILSLKERRIIRLRFGIEDGKQK 491

Query: 330  SLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLL 202
            SLS+IG+VFG++KERVRQLESRAL KL++C+   GL AYA LL
Sbjct: 492  SLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAYADLL 534


>ref|XP_006577030.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X2 [Glycine max]
          Length = 477

 Score =  455 bits (1171), Expect = e-125
 Identities = 238/384 (61%), Positives = 290/384 (75%), Gaps = 7/384 (1%)
 Frame = -3

Query: 1329 GLESTSLAIEAPLEKEIXXXXXXXXXXXXXXXXVPKPKAIVHETPSLRKVDIQRKINM-- 1156
            GL STSLA  + L+K                    K K I  E+   RK D+QR++ +  
Sbjct: 95   GLASTSLA-NSSLKKNKVVRSTRIIERRSKQRKSSKSKIIDEESYLERKSDVQRRLRLEK 153

Query: 1155 ----GFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVKVRLQSQFNREPTL 988
                G+DQNDPLRLFLSG E+RQLL+ +EE  L  +++ L+R EEVK+RLQSQ  REPTL
Sbjct: 154  KLKEGYDQNDPLRLFLSGPESRQLLTREEESLLITQLQDLSRFEEVKIRLQSQLRREPTL 213

Query: 987  VEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRGLNLQDLMQEGSMG 808
             EWADA G+SC  LQ+ LH  NRS+EK+  AN R+VVH+AK YQGRGL+LQDL QEGS G
Sbjct: 214  AEWADAVGLSCYTLQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGSTG 273

Query: 807  LMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYSLLRQVKNAKNLYI 628
            LMKSI+KFKP+AGCRF TYAYWWIR +IRKAIF +SRTIRLPEN+Y+LL ++  AK  YI
Sbjct: 274  LMKSIQKFKPEAGCRFGTYAYWWIRHAIRKAIFLHSRTIRLPENLYTLLGKLIEAKKSYI 333

Query: 627  QERH-HPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTTFQEITADSGVEIP 451
            QE + HPT EELA RVGI VEKL++LLF++R P+SMQQ +W DQ+TTFQEITADS +EIP
Sbjct: 334  QEGNLHPTKEELARRVGITVEKLDNLLFASRNPISMQQTLWVDQDTTFQEITADSAIEIP 393

Query: 450  ELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGSVFGITKERVRQLE 271
             + V+K+LMR HVHNLL+IL PKE+ IIRLRFGIEDG+ K+LS IG VFG+TKERVRQLE
Sbjct: 394  GVTVSKQLMRRHVHNLLNILSPKEKGIIRLRFGIEDGKEKTLSDIGKVFGLTKERVRQLE 453

Query: 270  SRALDKLRKCLSREGLGAYAGLLI 199
             RAL KL++CL  +GL AY  LL+
Sbjct: 454  CRALSKLKQCLESQGLDAYIDLLV 477


>ref|XP_006577029.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X1 [Glycine max]
          Length = 554

 Score =  455 bits (1171), Expect = e-125
 Identities = 238/384 (61%), Positives = 290/384 (75%), Gaps = 7/384 (1%)
 Frame = -3

Query: 1329 GLESTSLAIEAPLEKEIXXXXXXXXXXXXXXXXVPKPKAIVHETPSLRKVDIQRKINM-- 1156
            GL STSLA  + L+K                    K K I  E+   RK D+QR++ +  
Sbjct: 172  GLASTSLA-NSSLKKNKVVRSTRIIERRSKQRKSSKSKIIDEESYLERKSDVQRRLRLEK 230

Query: 1155 ----GFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVKVRLQSQFNREPTL 988
                G+DQNDPLRLFLSG E+RQLL+ +EE  L  +++ L+R EEVK+RLQSQ  REPTL
Sbjct: 231  KLKEGYDQNDPLRLFLSGPESRQLLTREEESLLITQLQDLSRFEEVKIRLQSQLRREPTL 290

Query: 987  VEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRGLNLQDLMQEGSMG 808
             EWADA G+SC  LQ+ LH  NRS+EK+  AN R+VVH+AK YQGRGL+LQDL QEGS G
Sbjct: 291  AEWADAVGLSCYTLQTQLHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGSTG 350

Query: 807  LMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYSLLRQVKNAKNLYI 628
            LMKSI+KFKP+AGCRF TYAYWWIR +IRKAIF +SRTIRLPEN+Y+LL ++  AK  YI
Sbjct: 351  LMKSIQKFKPEAGCRFGTYAYWWIRHAIRKAIFLHSRTIRLPENLYTLLGKLIEAKKSYI 410

Query: 627  QERH-HPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTTFQEITADSGVEIP 451
            QE + HPT EELA RVGI VEKL++LLF++R P+SMQQ +W DQ+TTFQEITADS +EIP
Sbjct: 411  QEGNLHPTKEELARRVGITVEKLDNLLFASRNPISMQQTLWVDQDTTFQEITADSAIEIP 470

Query: 450  ELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGSVFGITKERVRQLE 271
             + V+K+LMR HVHNLL+IL PKE+ IIRLRFGIEDG+ K+LS IG VFG+TKERVRQLE
Sbjct: 471  GVTVSKQLMRRHVHNLLNILSPKEKGIIRLRFGIEDGKEKTLSDIGKVFGLTKERVRQLE 530

Query: 270  SRALDKLRKCLSREGLGAYAGLLI 199
             RAL KL++CL  +GL AY  LL+
Sbjct: 531  CRALSKLKQCLESQGLDAYIDLLV 554


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530789|gb|ESR41972.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score =  452 bits (1164), Expect = e-124
 Identities = 230/343 (67%), Positives = 279/343 (81%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
            KPK   HET + RK  +++K++ GFD NDPLRLFL G ETR+LL+A EE EL  +I+ L 
Sbjct: 219  KPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 278

Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
            RLE+ K +LQSQF REPTL+       +SC  L+S LH GN SREK+  AN RLVVHVAK
Sbjct: 279  RLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 338

Query: 864  QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
            QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 339  QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 398

Query: 684  PENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
            PEN+Y+LL +V  AK LYIQE +H P  E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 399  PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 458

Query: 507  ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
            ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 459  ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 518

Query: 327  LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            LS++G++FG++KERVRQLESRAL +L++ L  +    YA LLI
Sbjct: 519  LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 561


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530788|gb|ESR41971.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  452 bits (1164), Expect = e-124
 Identities = 230/343 (67%), Positives = 279/343 (81%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
            KPK   HET + RK  +++K++ GFD NDPLRLFL G ETR+LL+A EE EL  +I+ L 
Sbjct: 227  KPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 286

Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
            RLE+ K +LQSQF REPTL+       +SC  L+S LH GN SREK+  AN RLVVHVAK
Sbjct: 287  RLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 346

Query: 864  QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
            QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 347  QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 406

Query: 684  PENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
            PEN+Y+LL +V  AK LYIQE +H P  E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 407  PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 466

Query: 507  ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
            ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 467  ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 526

Query: 327  LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            LS++G++FG++KERVRQLESRAL +L++ L  +    YA LLI
Sbjct: 527  LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 569


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530787|gb|ESR41970.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score =  452 bits (1164), Expect = e-124
 Identities = 230/343 (67%), Positives = 279/343 (81%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1224 KPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALT 1045
            KPK   HET + RK  +++K++ GFD NDPLRLFL G ETR+LL+A EE EL  +I+ L 
Sbjct: 216  KPKVTNHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLI 275

Query: 1044 RLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAK 865
            RLE+ K +LQSQF REPTL+       +SC  L+S LH GN SREK+  AN RLVVHVAK
Sbjct: 276  RLEKEKSKLQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAK 335

Query: 864  QYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRL 685
            QYQGRG+ L DL+QEGSMGLMKS+EKFKPQAGCRF++YAYWW+RQ+IRKAIFQ+SRTIRL
Sbjct: 336  QYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRL 395

Query: 684  PENVYSLLRQVKNAKNLYIQERHH-PTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVW 508
            PEN+Y+LL +V  AK LYIQE +H P  E+LA RVGI VEKLE L+F TRMPLSMQQPVW
Sbjct: 396  PENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVW 455

Query: 507  ADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKS 328
            ADQ+TTFQEITAD+GVEIP++ V K+LMR HV NLL++L PKER I+RLRFGIEDG+PKS
Sbjct: 456  ADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKS 515

Query: 327  LSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            LS++G++FG++KERVRQLESRAL +L++ L  +    YA LLI
Sbjct: 516  LSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASYGYADLLI 558


>ref|XP_007162766.1| hypothetical protein PHAVU_001G178600g [Phaseolus vulgaris]
            gi|561036230|gb|ESW34760.1| hypothetical protein
            PHAVU_001G178600g [Phaseolus vulgaris]
          Length = 550

 Score =  451 bits (1159), Expect = e-124
 Identities = 221/331 (66%), Positives = 273/331 (82%), Gaps = 1/331 (0%)
 Frame = -3

Query: 1188 RKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVKVRLQSQ 1009
            RK+ +++K+N GFDQNDPLR+FLS  E+RQLL+ +EE +L  +++ L+RLEEVK+RLQSQ
Sbjct: 220  RKLRLEKKLNEGFDQNDPLRMFLSDPESRQLLTREEESQLITQLQDLSRLEEVKIRLQSQ 279

Query: 1008 FNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRGLNLQDL 829
              REPTL EWAD  G+SC  LQ+ LH  NRS+EK+  AN R+VVH+AK YQGRGLNLQDL
Sbjct: 280  IRREPTLAEWADVLGLSCCALQTQLHCANRSKEKLFHANMRMVVHIAKYYQGRGLNLQDL 339

Query: 828  MQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYSLLRQVK 649
            +QEGS GL+KSI+KFKP  GCRF TYAYWWIR SIR+AIF +SRTIR+PEN+Y LL +V 
Sbjct: 340  LQEGSTGLLKSIDKFKPGGGCRFGTYAYWWIRHSIRRAIFLHSRTIRVPENLYRLLGKVL 399

Query: 648  NAKNLYIQERH-HPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTTFQEITA 472
             AK  +IQE + HP+ EELA RVGI V+KLE+LLF++R P+SMQQ VWADQ TTFQEITA
Sbjct: 400  EAKKSFIQEGNIHPSKEELARRVGITVDKLENLLFTSRNPISMQQSVWADQETTFQEITA 459

Query: 471  DSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGSVFGITK 292
            DS +EIP++ V+K+LMR HVHNLL++L PKE+ I+RLRFGIEDG+ K+LS IG VFG+TK
Sbjct: 460  DSAIEIPDVCVSKQLMRRHVHNLLNMLSPKEKSILRLRFGIEDGKEKTLSDIGKVFGLTK 519

Query: 291  ERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            ERVRQLESRAL KL+ CL  +GL +Y  LLI
Sbjct: 520  ERVRQLESRALSKLKDCLESQGLDSYIDLLI 550


>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 554

 Score =  446 bits (1146), Expect = e-122
 Identities = 222/337 (65%), Positives = 272/337 (80%), Gaps = 1/337 (0%)
 Frame = -3

Query: 1206 HETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKALTRLEEVK 1027
            +E  S    D++RK   G + NDPLRLFL G ETRQLL+ KEE EL   ++ + +LE VK
Sbjct: 218  YENSSSNSSDLRRKYREGLNPNDPLRLFLWGPETRQLLTLKEETELIARVQDVFKLEAVK 277

Query: 1026 VRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVAKQYQGRG 847
             RLQSQF REPTL+EWA+A G+SC +LQS L  G  SREK+  +N R+VVH+AKQYQGRG
Sbjct: 278  SRLQSQFGREPTLIEWAEAVGISCQMLQSQLRCGTSSREKLIYSNLRMVVHIAKQYQGRG 337

Query: 846  LNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIRLPENVYS 667
            L LQDL+QEGSMGLMKS+EKFKPQAGCRF+TYAYWW+RQ+IRKAIFQ+SRTIRLPENVY+
Sbjct: 338  LGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRTIRLPENVYT 397

Query: 666  LLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPVWADQNTT 490
            LL +V  AK  YIQE   +P+ EELA RVG+ VEKL  LL+ TRMP+SMQQ VWADQ+TT
Sbjct: 398  LLGKVLEAKKSYIQEGNQNPSREELARRVGMSVEKLGKLLYCTRMPVSMQQTVWADQDTT 457

Query: 489  FQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPKSLSQIGS 310
            FQE+TAD+G+EIP+L V K+LMR HV NLL  L  +ER+IIRLR+GIEDG+ +SL++IG 
Sbjct: 458  FQEVTADTGIEIPDLSVAKQLMRQHVRNLLHTLEKRERQIIRLRYGIEDGKQRSLTEIGE 517

Query: 309  VFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            +FG++KERVRQLESRA  KL++ L  +GLGAYA LL+
Sbjct: 518  IFGLSKERVRQLESRAFLKLKESLGSQGLGAYAPLLV 554


>ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Glycine max]
          Length = 575

 Score =  442 bits (1138), Expect = e-121
 Identities = 227/350 (64%), Positives = 273/350 (78%), Gaps = 7/350 (2%)
 Frame = -3

Query: 1227 PKPKAIVHETPSLRKVDIQRKI------NMGFDQNDPLRLFLSGSETRQLLSAKEERELF 1066
            PK K I  ET   RK D Q K+      N   DQ+DPLRLFL G ET+QLL+ ++E +L 
Sbjct: 226  PKSKVIDDETYLARKDDAQEKLRAEKKKNEELDQDDPLRLFLWGPETKQLLTLEQESQLI 285

Query: 1065 VEIKALTRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFR 886
             +I+ L RLEEVK  LQSQF REPT+ EWA+  G++C +LQS LH GNRSREK+  AN R
Sbjct: 286  SQIQDLLRLEEVKTNLQSQFGREPTMAEWAEGAGLNCRLLQSQLHSGNRSREKLIQANLR 345

Query: 885  LVVHVAKQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQ 706
            +VVHVAK YQGRGL+LQDL+QEGSMGLMKS+EKF P AG RF  YA+WWIRQ+IRKA+F+
Sbjct: 346  MVVHVAKSYQGRGLSLQDLLQEGSMGLMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFR 405

Query: 705  NSRTIRLPENVYSLLRQVKNAKNLYIQERH-HPTNEELANRVGIMVEKLESLLFSTRMPL 529
            +SRTIRLPE V+ LL +V  AK LYIQE + HPT EELA RVG+ VEK++ LLFS R+P+
Sbjct: 406  HSRTIRLPEKVFILLGKVMEAKKLYIQEGNLHPTKEELARRVGVTVEKIDKLLFSARIPI 465

Query: 528  SMQQPVWADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGI 349
            SMQQ VWADQNTTFQEITAD  VE  ++ V K+LMR HV N+LS+L PKERRIIRLR+G 
Sbjct: 466  SMQQTVWADQNTTFQEITADPTVEATDVTVEKQLMRRHVLNVLSVLHPKERRIIRLRYGF 525

Query: 348  EDGEPKSLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            EDGE KSLS+IG +FG++KERVRQLE RAL KL+KCL ++GL AY  LL+
Sbjct: 526  EDGEQKSLSEIGDIFGLSKERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 575


>gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus guttatus]
          Length = 559

 Score =  437 bits (1123), Expect = e-120
 Identities = 219/344 (63%), Positives = 275/344 (79%), Gaps = 1/344 (0%)
 Frame = -3

Query: 1227 PKPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKAL 1048
            PKP+    E    RK++  +K + G+D NDPLRLFL G ET QLLSAKEE +L  +I+ L
Sbjct: 216  PKPQLEDQEMNHRRKLEPHKKSSEGYDPNDPLRLFLWGPETTQLLSAKEEADLIAKIQEL 275

Query: 1047 TRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVA 868
             +L+EV+ RLQ+QF+REPTLVEWA A G+S   LQ  ++ GN SREK+  ANFRLVV++A
Sbjct: 276  MKLQEVRSRLQTQFSREPTLVEWAAAVGISTQALQFQVNCGNFSREKLIYANFRLVVYIA 335

Query: 867  KQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 688
            KQYQGRGLNLQDL+Q GSMGLMKS+EKFKP  GCRF+TYAYWWIRQSIRK++FQ+SRTIR
Sbjct: 336  KQYQGRGLNLQDLLQLGSMGLMKSVEKFKPLVGCRFATYAYWWIRQSIRKSLFQHSRTIR 395

Query: 687  LPENVYSLLRQVKNAKNLYI-QERHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPV 511
            LPENVY+LL +V  AK   I Q  H PT E++A   G+ VEKL+ LL+++R+PLSMQ+PV
Sbjct: 396  LPENVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGLSVEKLDRLLYTSRVPLSMQKPV 455

Query: 510  WADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPK 331
            W DQ+TTFQEITAD+ VE P++  +K++MR H  NLLS+L P+ER+IIRLRFGIEDGE K
Sbjct: 456  WMDQDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEDGEQK 515

Query: 330  SLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLLI 199
            SLS IG+ FG++KER+RQ+ESRAL KL++CLS  GL AYA +L+
Sbjct: 516  SLSDIGAGFGLSKERIRQIESRALYKLKQCLSSHGLSAYAEMLV 559


>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Cucumis sativus] gi|449482444|ref|XP_004156283.1|
            PREDICTED: RNA polymerase sigma factor sigF,
            chloroplastic-like [Cucumis sativus]
          Length = 562

 Score =  437 bits (1123), Expect = e-120
 Identities = 219/343 (63%), Positives = 274/343 (79%), Gaps = 1/343 (0%)
 Frame = -3

Query: 1227 PKPKAIVHETPSLRKVDIQRKINMGFDQNDPLRLFLSGSETRQLLSAKEERELFVEIKAL 1048
            PK    + E  + R  D +RK +  FD NDPLRLFL G ET++LL+A+EE EL V+I+ L
Sbjct: 219  PKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDL 278

Query: 1047 TRLEEVKVRLQSQFNREPTLVEWADATGMSCSILQSHLHLGNRSREKMACANFRLVVHVA 868
              L+ VK RLQSQF+REPTLVEWA+A G++C  LQS LH+   SREK+  AN R+VVH+A
Sbjct: 279  MILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVHIA 338

Query: 867  KQYQGRGLNLQDLMQEGSMGLMKSIEKFKPQAGCRFSTYAYWWIRQSIRKAIFQNSRTIR 688
            KQYQGRGL+L DL+Q GS+GLMKS+EKFKPQAGCRF +YAYWWIR SI KAIFQ+SRTIR
Sbjct: 339  KQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIR 398

Query: 687  LPENVYSLLRQVKNAKNLYIQE-RHHPTNEELANRVGIMVEKLESLLFSTRMPLSMQQPV 511
            LPENVY+LL +V  AKN +++   + P+ EELA RVGI VE+ + L+F +R+P S+QQPV
Sbjct: 399  LPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERFDKLMFMSRIPRSLQQPV 458

Query: 510  WADQNTTFQEITADSGVEIPELYVNKKLMRWHVHNLLSILPPKERRIIRLRFGIEDGEPK 331
            WADQ TTFQEITADS V+ P++ V ++LMR H+ NLLSIL PKERRIIRLRFGIEDG  K
Sbjct: 459  WADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGREK 518

Query: 330  SLSQIGSVFGITKERVRQLESRALDKLRKCLSREGLGAYAGLL 202
            +L +IG++FG++KERVRQLE+RAL KL++C + +GLGAYA LL
Sbjct: 519  TLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL 561