BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00009567
         (1118 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containi...   352   2e-94
emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]   350   5e-94
ref|XP_007037265.1| Tetratricopeptide repeat-like superfamily pr...   323   8e-86
gb|EXB93457.1| hypothetical protein L484_006119 [Morus notabilis]     299   2e-78
gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indi...   298   3e-78
ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group] g...   298   3e-78
ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [S...   292   2e-76
gb|EMT31592.1| hypothetical protein F775_14408 [Aegilops tauschii]    288   2e-75
dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]    285   2e-74
dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]    285   2e-74
ref|NP_001145846.1| CRR4 [Zea mays] gi|219884683|gb|ACL52716.1| ...   283   9e-74
gb|ACG45171.1| CRR4 [Zea mays]                                        283   9e-74
ref|XP_006644619.1| PREDICTED: pentatricopeptide repeat-containi...   282   2e-73
emb|CBI18084.3| unnamed protein product [Vitis vinifera]              268   2e-69
ref|XP_002323645.2| pentatricopeptide repeat-containing family p...   268   3e-69
gb|ABK26521.1| unknown [Picea sitchensis]                             267   5e-69
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr...   265   3e-68
ref|XP_007010338.1| Pentatricopeptide repeat (PPR) superfamily p...   259   1e-66
ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily p...   259   1e-66
ref|XP_002309169.1| pentatricopeptide repeat-containing family p...   259   2e-66

>ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 618

 Score =  352 bits (903), Expect = 2e-94
 Identities = 165/245 (67%), Positives = 206/245 (84%)
 Frame = -3

Query: 1113 MYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDIT 934
            MY+KCGNI K+R++FD++  RD VTWNSMI GLA+NGFA+DAI L+  MKE  VKP++IT
Sbjct: 373  MYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNIT 432

Query: 933  FVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKM 754
            FVGL+TACTHAG V LG EF+ SMR+D++++P +EH+AC+VDLFC+SGRL +AYE I +M
Sbjct: 433  FVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRM 492

Query: 753  EVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKAL 574
            EVEPNVVIWGTLLSA RIHLNVELAEL+ +KLL LEP+NSGNYV+L NIYAS GRWQ+AL
Sbjct: 493  EVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEAL 552

Query: 573  KVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAGYLP 394
            KVR LM +K VQK AAYSW E++  +HKFL+G+ SHPRSDE+Y+ +DGL+L   W GY  
Sbjct: 553  KVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGYEL 612

Query: 393  KFDLE 379
             F++E
Sbjct: 613  DFEIE 617



 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 48/140 (34%), Positives = 78/140 (55%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KCG +   R +FD MA RD+VTW++MI G A NG + +A++LF  MK   +KP+D+
Sbjct: 271  EMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDV 330

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            T V +L+AC   G V  G E   S      +   V   + ++ ++ K G + +A ++  K
Sbjct: 331  TLVSVLSACAQLGSVETG-ERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDK 389

Query: 756  MEVEPNVVIWGTLLSACRIH 697
            +    NV  W +++    I+
Sbjct: 390  LPQRDNVT-WNSMIMGLAIN 408



 Score = 67.8 bits (164), Expect = 8e-09
 Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 37/227 (16%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y++ G +  +RELFD+M  R IV+WN+MI   A NG       +F  M++   +P++IT 
Sbjct: 172  YSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITL 231

Query: 930  VGLLTACTHAG----------------------------LVYLGCEFYESMRTDYDMTPR 835
              +L+ C   G                             +Y+ C   +  R  +D   R
Sbjct: 232  ATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMAR 291

Query: 834  --VEHYACMVDLFCKSGRLGEAYELITKM---EVEPNVVIWGTLLSACRIHLNVELAELS 670
              V  ++ M+  + ++GR  EA EL   M   +++PN V   ++LSAC    +VE     
Sbjct: 292  RDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG--- 348

Query: 669  VEKLLVLEPENSGNYV----LLYNIYASTGRWQKALKVRNLMMEKGV 541
                     E  G+YV    L+ N+Y ++       K  N++  + +
Sbjct: 349  ---------ERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQI 386


>emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
          Length = 396

 Score =  350 bits (899), Expect = 5e-94
 Identities = 165/245 (67%), Positives = 205/245 (83%)
 Frame = -3

Query: 1113 MYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDIT 934
            MY+KCGNI K+R++FD++  RD VTWNSMI GLA+NGFA+DAI L+  MKE  VKP++IT
Sbjct: 151  MYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNIT 210

Query: 933  FVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKM 754
            FVGLLTACTHAG V LG EF+ SMR+D++++P +EH+AC+VDLFC+SGRL +AYE I +M
Sbjct: 211  FVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRM 270

Query: 753  EVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKAL 574
            EVEPNVVIWGTLLSA RIHLNVELAEL+ +KLL LEP+NSGNYV+L NIYAS  RWQ+AL
Sbjct: 271  EVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASASRWQEAL 330

Query: 573  KVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAGYLP 394
            KVR LM +K VQK AAYSW E++  +HKFL+G+ SHPRSDE+Y+ +DGL+L   W GY  
Sbjct: 331  KVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGYEL 390

Query: 393  KFDLE 379
             F++E
Sbjct: 391  DFEIE 395



 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 47/140 (33%), Positives = 77/140 (55%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KCG +   R +FD MA RD+V W++MI G A NG + +A++LF  MK   +KP+D+
Sbjct: 49   EMYVKCGAVDDGRLVFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDV 108

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            T V +L+AC   G V  G E   S      +   V   + ++ ++ K G + +A ++  K
Sbjct: 109  TLVSVLSACAQLGSVETG-ERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDK 167

Query: 756  MEVEPNVVIWGTLLSACRIH 697
            +    NV  W +++    I+
Sbjct: 168  LPQRDNVT-WNSMIMGLAIN 186


>ref|XP_007037265.1| Tetratricopeptide repeat-like superfamily protein, putative
            [Theobroma cacao] gi|508774510|gb|EOY21766.1|
            Tetratricopeptide repeat-like superfamily protein,
            putative [Theobroma cacao]
          Length = 707

 Score =  323 bits (828), Expect = 8e-86
 Identities = 156/223 (69%), Positives = 184/223 (82%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY+K GNI K+R++FD+M  RDIV+WNSMI GLAVNGFA+DAI L+ +MKE+ VKP  I
Sbjct: 372  DMYSKFGNIAKARQVFDKMPERDIVSWNSMIVGLAVNGFAEDAILLYEKMKESEVKPDSI 431

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFVGLLTAC+  GLV LG EF+ SM   Y + P++EHYAC+VDLFC++GRL EAYEL+ +
Sbjct: 432  TFVGLLTACSRTGLVELGLEFFRSMELHYSIEPKIEHYACIVDLFCRTGRLNEAYELVCR 491

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            ME+EPNVVIWGTLLSA R HLNVELAEL VEKLL LEPENSG+YVLL NIYAS GRWQ A
Sbjct: 492  MEMEPNVVIWGTLLSASRTHLNVELAELCVEKLLKLEPENSGHYVLLSNIYASLGRWQAA 551

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEI 448
            L+VRNLM  K VQK AAYSW E+D  +HKFL+G+  HPRS E+
Sbjct: 552  LEVRNLMKNKRVQKVAAYSWIELDNTVHKFLVGDTFHPRSSEM 594



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +M+ KCG I ++RE FD M  RD + W++MI G A N    +A++LF  MK+  ++P+D+
Sbjct: 271  NMFVKCGAIDEAREEFDWMRTRDTLAWSAMISGYAQNRRPTEALELFECMKKEQIRPNDV 330

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
              V +L+AC+  G V  G E   +     D+   V   + ++D++ K G + +A ++  K
Sbjct: 331  ALVSVLSACSQLGSVEAG-ECLAACIETQDLASNVYVASALLDMYSKFGNIAKARQVFDK 389

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPE-NSGNYVLLYNIYASTG 592
            M  E ++V W +++    ++   E A L  EK+   E + +S  +V L    + TG
Sbjct: 390  MP-ERDIVSWNSMIVGLAVNGFAEDAILLYEKMKESEVKPDSITFVGLLTACSRTG 444



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y+K G++  +  LFD+M  + + +WNSMI     NG+   A+++F  M+   + PS IT+
Sbjct: 172  YSKVGDVMAAECLFDEMKEKTVASWNSMISCYVNNGYHDKALEIFERMQANNIPPSQITW 231

Query: 930  VGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEA-------- 775
            V LL+       + LG +  + +  D ++         +V++F K G + EA        
Sbjct: 232  VTLLSLTAKLRDLKLGLK-VKKLIADSNICVNTIVLTAIVNMFVKCGAIDEAREEFDWMR 290

Query: 774  --------------------------YELITKMEVEPNVVIWGTLLSACRIHLNVELAEL 673
                                      +E + K ++ PN V   ++LSAC    +VE  E 
Sbjct: 291  TRDTLAWSAMISGYAQNRRPTEALELFECMKKEQIRPNDVALVSVLSACSQLGSVEAGE- 349

Query: 672  SVEKLLVLEPENSGNYV--LLYNIYASTGRWQKALKVRNLMMEKGV 541
             +   +  +   S  YV   L ++Y+  G   KA +V + M E+ +
Sbjct: 350  CLAACIETQDLASNVYVASALLDMYSKFGNIAKARQVFDKMPERDI 395


>gb|EXB93457.1| hypothetical protein L484_006119 [Morus notabilis]
          Length = 612

 Score =  299 bits (765), Expect = 2e-78
 Identities = 141/238 (59%), Positives = 192/238 (80%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DM++K GNI K+R++FD+M  +DIV+WNSMI GLAVNG+A++AI L+ +MKETG+KP +I
Sbjct: 373  DMHSKFGNIDKARQVFDEMRVKDIVSWNSMISGLAVNGYAEEAIHLYEKMKETGLKPDNI 432

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TF GLLTACTHAGL+ LG +F+ESM++DY +TP +EH+AC++DLFC+SGRL +AYE I++
Sbjct: 433  TFSGLLTACTHAGLIELGLKFFESMKSDYGITPEIEHHACVIDLFCRSGRLKDAYEYISR 492

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            MEV+ NVVIWGTLLSA R H+NVEL E  ++KLL LEPE  GNYV L N+YAS G+W++A
Sbjct: 493  MEVDSNVVIWGTLLSASRTHMNVELTESCLKKLLELEPEYYGNYVFLSNLYASIGKWEEA 552

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAG 403
             +VR LM ++ ++K  AYS       LHKFL+G+ SH R +EI+++V+ L++QL  AG
Sbjct: 553  SEVRKLMKDRKLKKEVAYSCITAGNELHKFLVGDTSHHRWNEIFSLVNELAIQLTSAG 610



 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 50/162 (30%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            ++Y KCG +  +R  FD+M  RD+V W++M+ G A NG + +AI LF  M    +KP + 
Sbjct: 272  ELYVKCGAVDGARREFDRMDRRDVVAWSAMLAGYAQNGRSIEAIKLFERMMNEKIKPDNA 331

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
              V  L+AC  +G V +G E   +    +  T  V+  + ++D+  K G + +A ++  +
Sbjct: 332  ALVSALSACAQSGFVEVG-ERISAYVESHSFTSDVKVASALLDMHSKFGNIDKARQVFDE 390

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKL--LVLEPEN 637
            M V+ ++V W +++S   ++   E A    EK+    L+P+N
Sbjct: 391  MRVK-DIVSWNSMISGLAVNGYAEEAIHLYEKMKETGLKPDN 431



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 39/133 (29%), Positives = 65/133 (48%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y++ G+ + +R LFD M  R +V+WNSMI   A N    +A+ L   M+     PS IT 
Sbjct: 172  YSRSGDTKAARRLFDDMPERTVVSWNSMISCYAQNEDYHEALRLIERMQAENFGPSKITL 231

Query: 930  VGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKME 751
            V LL+ C   G + +G    +    D  +   +     +++L+ K G +  A     +M+
Sbjct: 232  VILLSICAKLGDLEMGLGIKKKYIDDSSLRSDMIISTAILELYVKCGAVDGARREFDRMD 291

Query: 750  VEPNVVIWGTLLS 712
               +VV W  +L+
Sbjct: 292  -RRDVVAWSAMLA 303


>gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
          Length = 608

 Score =  298 bits (763), Expect = 3e-78
 Identities = 140/234 (59%), Positives = 181/234 (77%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY KCG++ ++R +F++M H+ ++TWNSM+ GLA+NGFA+DAI L+ EM E  V+P++I
Sbjct: 360  DMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEI 419

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFV LLTACTHAGLV  G  F++ M+T + ++P+VEH AC+VDL CKSGRL EAY+ I  
Sbjct: 420  TFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICD 479

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            MEVEPN VIW TLLSACR H +VELA+L+  KLLVLEP+NS  YVLL NIYA  G W   
Sbjct: 480  MEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDV 539

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQL 415
             ++R+LM  K VQK +AYSW E+DG +HKFL+ +  HP+S EI+NVVDG+ L L
Sbjct: 540  REIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPKSAEIFNVVDGMGLHL 593



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I ++R  FD+M  RD+V W++MI G A NG   ++++LF  MK T  KP+++
Sbjct: 259  EMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEV 318

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHY-ACMVDLFCKSGRLGEAYELIT 760
            T VG+L+AC   G   LG +       +    P   +  + ++D++ K G +G A  +  
Sbjct: 319  TLVGVLSACAQLGSDELGGQI--GSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFN 376

Query: 759  KMEVEPNVVIWGTLL 715
            +ME    V+ W +++
Sbjct: 377  RME-HKVVITWNSMM 390



 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y+K G++ K+R LFD M  R   +WNSMI   A  G  ++A+ LF  M   G +P+ IT 
Sbjct: 161  YSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITI 220

Query: 930  VGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKME 751
              + + C   G +  G ++  S+  + D+   + H A M +++ K   + EA     +M+
Sbjct: 221  ATMFSICAKTGDLETG-KWARSLIAEQDLQNMIVHTALM-EMYVKCQAIDEARREFDRMQ 278

Query: 750  VEPNVVIWGTLLSAC----RIHLNVELAE 676
             + +VV W T+++      R H ++EL E
Sbjct: 279  -QRDVVAWSTMIAGYAQNGRPHESLELFE 306


>ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
            gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR)
            repeat-containing protein-like [Oryza sativa Japonica
            Group] gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza
            sativa Japonica Group] gi|125571815|gb|EAZ13330.1|
            hypothetical protein OsJ_03251 [Oryza sativa Japonica
            Group]
          Length = 608

 Score =  298 bits (763), Expect = 3e-78
 Identities = 140/234 (59%), Positives = 181/234 (77%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY KCG++ ++R +F++M H+ ++TWNSM+ GLA+NGFA+DAI L+ EM E  V+P++I
Sbjct: 360  DMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEI 419

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFV LLTACTHAGLV  G  F++ M+T + ++P+VEH AC+VDL CKSGRL EAY+ I  
Sbjct: 420  TFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICD 479

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            MEVEPN VIW TLLSACR H +VELA+L+  KLLVLEP+NS  YVLL NIYA  G W   
Sbjct: 480  MEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDV 539

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQL 415
             ++R+LM  K VQK +AYSW E+DG +HKFL+ +  HP+S EI+NVVDG+ L L
Sbjct: 540  REIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPKSAEIFNVVDGMGLHL 593



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I ++R  FD+M  RD+V W++MI G A NG   ++++LF  MK T  KP+++
Sbjct: 259  EMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEV 318

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHY-ACMVDLFCKSGRLGEAYELIT 760
            T VG+L+AC   G   LG +       +    P   +  + ++D++ K G +G A  +  
Sbjct: 319  TLVGVLSACAQLGSDELGGQI--GSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFN 376

Query: 759  KMEVEPNVVIWGTLL 715
            +ME    V+ W +++
Sbjct: 377  RME-HKVVITWNSMM 390



 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y+K G++ K+R LFD M  R   +WNSMI   A  G  ++A+ LF  M   G +P+ IT 
Sbjct: 161  YSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITI 220

Query: 930  VGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKME 751
              + + C   G +  G ++  S+  + D+   + H A M +++ K   + EA     +M+
Sbjct: 221  ATMFSICAKTGDLETG-KWARSLIAEQDLQNMIVHTALM-EMYVKCRAIDEARREFDRMQ 278

Query: 750  VEPNVVIWGTLLSAC----RIHLNVELAE 676
             + +VV W T+++      R H ++EL E
Sbjct: 279  -QRDVVAWSTMIAGYAQNGRPHESLELFE 306


>ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
            gi|241930382|gb|EES03527.1| hypothetical protein
            SORBIDRAFT_03g032890 [Sorghum bicolor]
          Length = 695

 Score =  292 bits (747), Expect = 2e-76
 Identities = 138/235 (58%), Positives = 178/235 (75%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY KCG++ ++R +F++M  + +VTWNSMI GLA+NGFA+DAI L+ +M   G++P+++
Sbjct: 449  DMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEV 508

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFV LLTACTHAGLV  G  F+E M+    ++P+VEH AC+VDL CKSGRL EAY+ I  
Sbjct: 509  TFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYKFICD 568

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            MEVEPN VIW TLLSACR H +VELA+L+  KL+ LEP NS  YVLL NIYA  G W   
Sbjct: 569  MEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDV 628

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQ 412
             ++R+LM  K +QK +AYSW E+DG +H+FL+ +  HPRS EIYNVVDGL LQL+
Sbjct: 629  REIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLE 683



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I ++R  FD+M  RD+V W++MI G + NG   ++++LF  MK T  KP+++
Sbjct: 348  EMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEV 407

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHY--ACMVDLFCKSGRLGEAYELI 763
            T VG+L+AC   G   LG +    + +    T  +  Y  + ++D++ K G +  A  + 
Sbjct: 408  TLVGVLSACAQLGSDELGEQIGNYIES---QTLPLTSYLGSALIDMYTKCGHVARARSVF 464

Query: 762  TKMEVEPNVVIWGTLL 715
             +ME +  VV W +++
Sbjct: 465  NRME-QKVVVTWNSMI 479



 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 45/235 (19%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y+K G++ ++R LFD M  R   +WNSMI   A  G  ++A+ LF +M   G  P+ IT 
Sbjct: 250  YSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAITI 309

Query: 930  VGLLTACTHAG---------------------------LVYLGCEFYESMRTDYDMTPR- 835
              + + C   G                            +Y+ C   +  R ++D  PR 
Sbjct: 310  TTVFSICAKTGDLDTGRRARAWIREEDLQNVIVHTALMEMYVKCRAIDEARHEFDRMPRR 369

Query: 834  -VEHYACMVDLFCKSGRLGEAYELITKMEV---EPNVVIWGTLLSACRIHLNVELAELSV 667
             V  ++ M+  + ++GR  E+ EL  +M+    +PN V    +LSAC        A+L  
Sbjct: 370  DVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSAC--------AQLGS 421

Query: 666  EKLLVLEPENSGNYV-------------LLYNIYASTGRWQKALKVRNLMMEKGV 541
            ++L     E  GNY+              L ++Y   G   +A  V N M +K V
Sbjct: 422  DEL----GEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVV 472


>gb|EMT31592.1| hypothetical protein F775_14408 [Aegilops tauschii]
          Length = 594

 Score =  288 bits (738), Expect = 2e-75
 Identities = 135/237 (56%), Positives = 179/237 (75%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY +CG++ ++R +F +M  + ++TWNSMI GLA+NGFA+DAI L+ +M E GV+P++I
Sbjct: 346  DMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEI 405

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFV LL ACTHAGLV  G  F+E M+ ++ ++P+VEH AC+VDL CKSGRL EAY+ I  
Sbjct: 406  TFVALLAACTHAGLVDQGMAFFEEMKREHHVSPQVEHCACIVDLLCKSGRLWEAYKFICD 465

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            MEV+PN VIW TLLS+CR+H +VELA+L+  KLL +EP+NS  YVLL NIYA  G W   
Sbjct: 466  MEVKPNAVIWTTLLSSCRVHADVELAKLAASKLLAMEPDNSSIYVLLSNIYADAGLWGDV 525

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWA 406
             ++R+LM  K VQK +AYSW ++DG +HKFL+ +  HPRS EIY+VV GL L L  A
Sbjct: 526  REIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIYDVVHGLGLLLDRA 582



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I  +R  FD+M  RD+V W++MI G A NG   ++++LF  MKET  +P+++
Sbjct: 245  EMYVKCRAIDDARREFDRMLQRDVVAWSTMIAGYAQNGRPLESLELFERMKETDCRPNEV 304

Query: 936  TFVGLLTACTHAG---LVYLGCEFYESMRTDYDMTPRVEHY-ACMVDLFCKSGRLGEAYE 769
            T VG+L+AC   G   LV     + E+ R      P   +  + ++D++ + G +G A  
Sbjct: 305  TLVGVLSACAQLGSDELVEQIGNYAENQR-----LPLTSYLGSALIDMYTRCGHVGRARS 359

Query: 768  LITKMEVEPNVVIWGTLLSACRIHLNVELAELSVEKL 658
            + ++ME +  V+ W +++    ++   E A    EK+
Sbjct: 360  VFSRME-QKGVITWNSMIRGLAMNGFAEDAISLYEKM 395



 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 45/235 (19%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y+K G++ K+R+LFD M  R   +WNSMI   A  G  ++A+ LF  M   G +P+ IT 
Sbjct: 147  YSKSGDVNKARKLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITI 206

Query: 930  VGLLTACTHAG---------------------------LVYLGCEFYESMRTDYD--MTP 838
              + + C  +G                            +Y+ C   +  R ++D  +  
Sbjct: 207  TSVFSICAKSGDLDTGKRVRALIGEEDLQNVIVHTALMEMYVKCRAIDDARREFDRMLQR 266

Query: 837  RVEHYACMVDLFCKSGRLGEAYELITKM---EVEPNVVIWGTLLSACRIHLNVELAELSV 667
             V  ++ M+  + ++GR  E+ EL  +M   +  PN V    +LSAC        A+L  
Sbjct: 267  DVVAWSTMIAGYAQNGRPLESLELFERMKETDCRPNEVTLVGVLSAC--------AQLGS 318

Query: 666  EKLLVLEPENSGNYV-------------LLYNIYASTGRWQKALKVRNLMMEKGV 541
            ++L+    E  GNY               L ++Y   G   +A  V + M +KGV
Sbjct: 319  DELV----EQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGV 369


>dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 642

 Score =  285 bits (729), Expect = 2e-74
 Identities = 135/237 (56%), Positives = 178/237 (75%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY +CG++ ++R +F +M  + ++TWNSMI GLA+NGFA+DAI L+ +M E GV+P++I
Sbjct: 394  DMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEI 453

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFV LL ACTHAGLV  G  F+E M+ ++ ++P+VEH AC+VDL CKSG L EAY+ I  
Sbjct: 454  TFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICD 513

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            MEVEPN VIW TLLS+CR H +VELA+L+  KLL +EP+NS  YVLL NIYA  G W  A
Sbjct: 514  MEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDA 573

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWA 406
             ++R+LM  K VQK +AYSW ++DG +HKFL+ +  HPRS EIY+V+ GL L L  A
Sbjct: 574  REIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIYDVIHGLGLLLDRA 630



 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I  +R  FD+M+ RD+V W++MI G A NG   ++++LF  MK T  +P+++
Sbjct: 293  EMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEV 352

Query: 936  TFVGLLTACTHAG---LVYLGCEFYESMRTDYDMTPRVEHY-ACMVDLFCKSGRLGEAYE 769
            T VG+++AC   G   LV     + E+ R      P   +  + ++D++ + G +G A  
Sbjct: 353  TLVGVISACAQLGSDELVEQIGNYAENQR-----LPLTSYLGSALIDMYTRCGHVGRARS 407

Query: 768  LITKMEVEPNVVIWGTLLSACRIHLNVELAELSVEKL 658
            + ++ME +  V+ W +++    ++   E A    EK+
Sbjct: 408  VFSRME-QKGVITWNSMIRGLAMNGFAEDAISLYEKM 443



 Score = 71.2 bits (173), Expect = 7e-10
 Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y+K G++ K+R LFD M  R   +WNSMI   A  G  ++A+ LF  M   G +P+ IT 
Sbjct: 195  YSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITI 254

Query: 930  VGLLTACTHAG---------------------------LVYLGCEFYESMRTDYD-MTPR 835
              + + C  +G                            +Y+ C   +  R ++D M+ R
Sbjct: 255  TSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQR 314

Query: 834  -VEHYACMVDLFCKSGRLGEAYELITKM---EVEPNVVIWGTLLSACRIHLNVELAELSV 667
             V  ++ M+  + ++GR  E+ EL  +M   +  PN V    ++SAC        A+L  
Sbjct: 315  DVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISAC--------AQLGS 366

Query: 666  EKLLVLEPENSGNYV-------------LLYNIYASTGRWQKALKVRNLMMEKGV 541
            ++L+    E  GNY               L ++Y   G   +A  V + M +KGV
Sbjct: 367  DELV----EQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGV 417


>dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 593

 Score =  285 bits (729), Expect = 2e-74
 Identities = 135/237 (56%), Positives = 178/237 (75%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY +CG++ ++R +F +M  + ++TWNSMI GLA+NGFA+DAI L+ +M E GV+P++I
Sbjct: 345  DMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEI 404

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFV LL ACTHAGLV  G  F+E M+ ++ ++P+VEH AC+VDL CKSG L EAY+ I  
Sbjct: 405  TFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICD 464

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            MEVEPN VIW TLLS+CR H +VELA+L+  KLL +EP+NS  YVLL NIYA  G W  A
Sbjct: 465  MEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDA 524

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWA 406
             ++R+LM  K VQK +AYSW ++DG +HKFL+ +  HPRS EIY+V+ GL L L  A
Sbjct: 525  REIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIYDVIHGLGLLLDRA 581



 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I  +R  FD+M+ RD+V W++MI G A NG   ++++LF  MK T  +P+++
Sbjct: 244  EMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEV 303

Query: 936  TFVGLLTACTHAG---LVYLGCEFYESMRTDYDMTPRVEHY-ACMVDLFCKSGRLGEAYE 769
            T VG+++AC   G   LV     + E+ R      P   +  + ++D++ + G +G A  
Sbjct: 304  TLVGVISACAQLGSDELVEQIGNYAENQR-----LPLTSYLGSALIDMYTRCGHVGRARS 358

Query: 768  LITKMEVEPNVVIWGTLLSACRIHLNVELAELSVEKL 658
            + ++ME +  V+ W +++    ++   E A    EK+
Sbjct: 359  VFSRME-QKGVITWNSMIRGLAMNGFAEDAISLYEKM 394



 Score = 70.9 bits (172), Expect = 9e-10
 Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y+K G++ K+R LFD M  R   +WNSMI   A  G  ++A+ LF  M   G +P+ IT 
Sbjct: 146  YSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAITI 205

Query: 930  VGLLTACTHAG---------------------------LVYLGCEFYESMRTDYD-MTPR 835
              + + C  +G                            +Y+ C   +  R ++D M+ R
Sbjct: 206  TSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQR 265

Query: 834  -VEHYACMVDLFCKSGRLGEAYELITKM---EVEPNVVIWGTLLSACRIHLNVELAELSV 667
             V  ++ M+  + ++GR  E+ EL  +M   +  PN V    ++SAC        A+L  
Sbjct: 266  DVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISAC--------AQLGS 317

Query: 666  EKLLVLEPENSGNYV-------------LLYNIYASTGRWQKALKVRNLMMEKGV 541
            ++L+    E  GNY               L ++Y   G   +A  V + M +KGV
Sbjct: 318  DELV----EQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGV 368


>ref|NP_001145846.1| CRR4 [Zea mays] gi|219884683|gb|ACL52716.1| unknown [Zea mays]
            gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
          Length = 601

 Score =  283 bits (724), Expect = 9e-74
 Identities = 137/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY KCG++ ++R++F +M  + ++ WNSMI GLA+NGFA+DAI L+ EM   GV+P++I
Sbjct: 353  DMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEI 412

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYD-MTPRVEHYACMVDLFCKSGRLGEAYELIT 760
            TF+ LLTACTHAGLV  G  F++ M+ +    +P+VEH AC+VDL CKSGRL EAY+ I 
Sbjct: 413  TFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFIC 472

Query: 759  KMEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQK 580
             MEVEPN VIW TLLSACR H +VELA+L+  KL+VLEP +S  YVLL NIYA  G W  
Sbjct: 473  DMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGD 532

Query: 579  ALKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQ 412
              ++R+LM  K +QK +AYSW E+DG +H+FL+ +  HPRS EIYNVVDGL LQL+
Sbjct: 533  VREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLE 588



 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 44/136 (32%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I ++R  FD+M  RD+V W++MI G + NG   ++++LF  MK T  KP+++
Sbjct: 252  EMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEV 311

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHY--ACMVDLFCKSGRLGEAYELI 763
            T VG+L+AC   G   LG +    + +    T  +  Y  + ++D++ K G +  A ++ 
Sbjct: 312  TLVGVLSACAQLGSDELGEQIGSYIES---QTLPLTSYLGSALIDMYTKCGHVARARDVF 368

Query: 762  TKMEVEPNVVIWGTLL 715
             +ME +  V+ W +++
Sbjct: 369  HRME-QKVVIAWNSMI 383



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 32/177 (18%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y++ G++ ++R LFD M  +   +WNSMI   A  G  ++A+ LF +M   G  P+ IT 
Sbjct: 154  YSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITI 213

Query: 930  VGLLTACTHAG---------------------------LVYLGCEFYESMRTDYDMTPR- 835
              + + C   G                            +Y+ C   +  R ++D  PR 
Sbjct: 214  TTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRMPRR 273

Query: 834  -VEHYACMVDLFCKSGRLGEAYELITKMEV---EPNVVIWGTLLSACRIHLNVELAE 676
             V  ++ M+  +  +GR  E+ EL  +M+    +PN V    +LSAC    + EL E
Sbjct: 274  DVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGE 330


>gb|ACG45171.1| CRR4 [Zea mays]
          Length = 601

 Score =  283 bits (724), Expect = 9e-74
 Identities = 137/236 (58%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY KCG++ ++R++F +M  + ++ WNSMI GLA+NGFA+DAI L+ EM   GV+P++I
Sbjct: 353  DMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEI 412

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYD-MTPRVEHYACMVDLFCKSGRLGEAYELIT 760
            TF+ LLTACTHAGLV  G  F++ M+ +    +P+VEH AC+VDL CKSGRL EAY+ I 
Sbjct: 413  TFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFIC 472

Query: 759  KMEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQK 580
             MEVEPN VIW TLLSACR H +VELA+L+  KL+VLEP +S  YVLL NIYA  G W  
Sbjct: 473  DMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGD 532

Query: 579  ALKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQ 412
              ++R+LM  K +QK +AYSW E+DG +H+FL+ +  HPRS EIYNVVDGL LQL+
Sbjct: 533  VREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLE 588



 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 44/136 (32%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I ++R  FD+M  RD+V W++MI G + NG   ++++LF  MK T  KP+++
Sbjct: 252  EMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEV 311

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHY--ACMVDLFCKSGRLGEAYELI 763
            T VG+L+AC   G   LG +    + +    T  +  Y  + ++D++ K G +  A ++ 
Sbjct: 312  TLVGVLSACAQLGSDELGEQIGSYIES---QTLPLTSYLGSALIDMYTKCGHVARARDVF 368

Query: 762  TKMEVEPNVVIWGTLL 715
             +ME +  V+ W +++
Sbjct: 369  HRME-QKVVIAWNSMI 383



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 32/177 (18%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y++ G++ ++R LFD M  +   +WNSMI   A  G  ++A+ LF +M   G  P+ IT 
Sbjct: 154  YSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITI 213

Query: 930  VGLLTACTHAG---------------------------LVYLGCEFYESMRTDYDMTPR- 835
              + + C   G                            +Y+ C   +  R ++D  PR 
Sbjct: 214  TTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRMPRR 273

Query: 834  -VEHYACMVDLFCKSGRLGEAYELITKMEV---EPNVVIWGTLLSACRIHLNVELAE 676
             V  ++ M+  +  +GR  E+ EL  +M+    +PN V    +LSAC    + EL E
Sbjct: 274  DVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGE 330


>ref|XP_006644619.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Oryza brachyantha]
          Length = 610

 Score =  282 bits (722), Expect = 2e-73
 Identities = 136/236 (57%), Positives = 173/236 (73%), Gaps = 2/236 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEM--KETGVKPS 943
            DMY KCGN+ ++R +F+QM H+ ++TWNSMI GLA+NG A+DAI L+ ++   +  V+P+
Sbjct: 360  DMYTKCGNVGRARHVFNQMEHKCVITWNSMIRGLALNGLAQDAITLYKQLIRDDHDVRPN 419

Query: 942  DITFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELI 763
            +ITFV LLTACTHAGLV  G  F+E M+T Y ++P+VEH AC+VDL CKSGR  EA+E I
Sbjct: 420  EITFVALLTACTHAGLVDQGMAFFEEMKTVYHVSPQVEHCACIVDLLCKSGRPREAHEFI 479

Query: 762  TKMEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQ 583
              MEV PN VIW TLL ACR H +VELA+L+   LLVLEP+NS  YVLL NIYA  G W 
Sbjct: 480  CGMEVRPNAVIWSTLLGACRTHADVELAKLAASNLLVLEPDNSSIYVLLSNIYADAGLWG 539

Query: 582  KALKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQL 415
             A ++R LM  K VQK +AYSW E+DG +H+FL+ +  HP S EIY V DG+ L L
Sbjct: 540  DAREIRRLMWSKNVQKLSAYSWIELDGEVHRFLVQDTYHPESAEIYAVADGMGLHL 595



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            +MY KC  I ++R  FD+M  RD+V W++MI G A N    ++++LF  MK TG +P+++
Sbjct: 259  EMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNRRPHESLELFERMKSTGCRPNEV 318

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHY-ACMVDLFCKSGRLGEAYELIT 760
            T VG+L+AC   G   LG +       +    P   +  + ++D++ K G +G A  +  
Sbjct: 319  TLVGILSACAQLGSDELGGQI--GSYVESQSLPLTSYLGSALIDMYTKCGNVGRARHVFN 376

Query: 759  KMEVEPNVVIWGTLL 715
            +ME    V+ W +++
Sbjct: 377  QME-HKCVITWNSMI 390



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
 Frame = -3

Query: 1110 YAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITF 931
            Y+K G++  +R LFD M  R   +WNSMI   A  G  ++A+ LF  M   G +P+ IT 
Sbjct: 161  YSKSGDVDTARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFHRMLSEGARPNAITI 220

Query: 930  VGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKME 751
              + + C     +  G ++  S+  + D+   + H A M +++ K   + EA     +M+
Sbjct: 221  ATMFSICAKTRDLETG-KWTRSLIAEEDLQNMIVHTALM-EMYVKCRAIDEARREFDRMQ 278

Query: 750  VEPNVVIWGTLLSAC----RIHLNVELAE 676
             + +VV W T+++      R H ++EL E
Sbjct: 279  -QRDVVAWSTMIAGYAQNRRPHESLELFE 306


>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  268 bits (686), Expect = 2e-69
 Identities = 126/247 (51%), Positives = 178/247 (72%), Gaps = 3/247 (1%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMK---ETGVKP 946
            DMYAKCGN+ K+R +FD M  +DIV+W +MI G A+NG  K+AIDLF++M+   + G+KP
Sbjct: 164  DMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKP 223

Query: 945  SDITFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYEL 766
               TF+GLL  CTHAGLV  G  ++ SM   + +TP +EHY CMVDL  ++G L EA++L
Sbjct: 224  DGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQL 283

Query: 765  ITKMEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRW 586
            I  M +E N ++WG LL ACRIH + +LAEL++++L+ LEP NSGNYVLL NIY++  +W
Sbjct: 284  IRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKW 343

Query: 585  QKALKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWA 406
             +A KVR  M EK +QK    SW E+DG++H+FL+G+  HP S++IY  +D L+ +++ A
Sbjct: 344  DEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVA 403

Query: 405  GYLPKFD 385
            GY+P  D
Sbjct: 404  GYVPTTD 410



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
 Frame = -3

Query: 1083 SRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITFVGLLTACTH 904
            +R LF Q+   +I  WN+MI GL  N    DAI+ +  M+  G  P++ TF  +L AC  
Sbjct: 65   TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACAR 124

Query: 903  AGLVYLGC--------EFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKMEV 748
               + LG         E+      +  M   V     +VD++ K G + +A  +   M  
Sbjct: 125  LLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP- 183

Query: 747  EPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPEN 637
            E ++V WG ++    ++    L + +++  L ++ EN
Sbjct: 184  EKDIVSWGAMIQGYALN---GLPKEAIDLFLQMQREN 217


>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550321449|gb|EEF05406.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 682

 Score =  268 bits (685), Expect = 3e-69
 Identities = 122/244 (50%), Positives = 177/244 (72%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMYAKCG + ++ E+F  M  +D V WN+ I GLA++G  KDA+ LF +M+++G+KP   
Sbjct: 353  DMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRN 412

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFVGLL ACTHAGLV  G  ++ SM   Y +TP +EHY CMVDL  ++G L EA++LI  
Sbjct: 413  TFVGLLCACTHAGLVEEGRRYFNSMECVYTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKS 472

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            M +E N ++WG LL  CR+H + +L E+ ++KL+ LEP +SGNYVLL NIYA++ +W++A
Sbjct: 473  MPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEA 532

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAGYL 397
             K+R++M E+GV+K   YSW E+DG++H+FL+G+ SHP S++IY  +  L+  L+ AGY+
Sbjct: 533  AKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYV 592

Query: 396  PKFD 385
            P  D
Sbjct: 593  PTTD 596



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 47/135 (34%), Positives = 76/135 (56%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            D Y KCGN+ ++R +FD M  ++IV+W+SMI G A NG  K+A+DLF +M   G+KP   
Sbjct: 252  DFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCY 311

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
              VG+L +C   G + LG ++  ++    +          ++D++ K GR+  A+E+   
Sbjct: 312  AMVGVLCSCARLGALELG-DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRG 370

Query: 756  MEVEPNVVIWGTLLS 712
            M  +  VV W   +S
Sbjct: 371  MRKKDRVV-WNAAIS 384



 Score = 71.2 bits (173), Expect = 7e-10
 Identities = 38/134 (28%), Positives = 70/134 (52%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            ++Y KCG I  + ++FD +  ++  +W + I G    G  ++AID+F  + E G++P   
Sbjct: 151  NLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSF 210

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            + V +L+AC   G +  G E+ +   T+  M   V     +VD + K G +  A  +   
Sbjct: 211  SLVEVLSACKRTGDLRSG-EWIDEYITENGMARNVFVATALVDFYGKCGNMERARSVFDG 269

Query: 756  MEVEPNVVIWGTLL 715
            M +E N+V W +++
Sbjct: 270  M-LEKNIVSWSSMI 282


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  267 bits (683), Expect = 5e-69
 Identities = 121/241 (50%), Positives = 175/241 (72%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMY KCG I  ++E+F ++   D+ +WN+MI GLA +G  K+A+ LF +M +TGVKP+ I
Sbjct: 41   DMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQI 100

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFV +L+ C+HAGLV  G  +++SM  D+ ++P+ EHY+CMVDLF ++G L EA   I +
Sbjct: 101  TFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQ 160

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            M VEPN  +WG+LL ACR+H N+ELAE +VE+L+ L PEN G YVLL NIYA+ GRW  A
Sbjct: 161  MPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDA 220

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAGYL 397
             KVR +M ++ V+K    SW E+   +H F++G++SHP+ +EIY  ++ L+LQ++ AGY+
Sbjct: 221  GKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYI 280

Query: 396  P 394
            P
Sbjct: 281  P 281


>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
            gi|568855070|ref|XP_006481133.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein
            At3g08820-like [Citrus sinensis]
            gi|557531571|gb|ESR42754.1| hypothetical protein
            CICLE_v10011209mg [Citrus clementina]
          Length = 688

 Score =  265 bits (676), Expect = 3e-68
 Identities = 117/244 (47%), Positives = 179/244 (73%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMYAKCG + ++ ++F +M  +D V WN+++ GL++NG+ K A  +F ++++ G++P+  
Sbjct: 359  DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 418

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFVGLL  CTHAGLV  G +F+ SM   + +TP +EHY CMVDL  +SG+L EA+ELI  
Sbjct: 419  TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 478

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            M +EPN ++WG LL+ CR+H   +LAE  + +L+ LEP NSGNYVLL NIY+++ +W  A
Sbjct: 479  MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 538

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAGYL 397
             K+R++M +KG+QK    SW E+DG++H+FL+G+ SHP S++IY+ +D L+ +L+ AG++
Sbjct: 539  AKIRSMMGDKGIQKIRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFV 598

Query: 396  PKFD 385
            P  D
Sbjct: 599  PTTD 602



 Score =  107 bits (268), Expect = 7e-21
 Identities = 55/147 (37%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            D+YAKCGN+ K+R +FDQM  +DIV+W+SMI G A NGF K+A+D+F  M+   +KP   
Sbjct: 258  DLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPDRY 317

Query: 936  TFVGLLTACTHAGLVYLGCEFYESM-RTDYDMTPRVEHYACMVDLFCKSGRLGEAYELIT 760
            T VG+L+AC   G + LG      M R ++   P +     ++D++ K GR+ +A ++  
Sbjct: 318  TMVGVLSACASLGALELGVWASSFMERNEFLSNPVLG--TTLIDMYAKCGRMAQACKVFR 375

Query: 759  KMEVEPNVVIWGTLLSACRIHLNVELA 679
            +M+ + + V+W  ++S   ++  V++A
Sbjct: 376  EMK-DKDQVVWNAVVSGLSMNGYVKVA 401



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 35/134 (26%), Positives = 71/134 (52%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            ++Y  CG +  + ++FD +  +++V+W ++I G    G  ++AI++F  +   G+KP   
Sbjct: 157  NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 216

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            + V +LTACT  G +    ++      +  M   V     +VDL+ K G + +A  +  +
Sbjct: 217  SIVRVLTACTQLGDLST-AKWIHGYVNEAGMGRNVFVATSLVDLYAKCGNMEKARRVFDQ 275

Query: 756  MEVEPNVVIWGTLL 715
            M  E ++V W +++
Sbjct: 276  MP-EKDIVSWSSMI 288


>ref|XP_007010338.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 3
            [Theobroma cacao] gi|590566810|ref|XP_007010339.1|
            Pentatricopeptide repeat (PPR) superfamily protein
            isoform 3 [Theobroma cacao] gi|508727251|gb|EOY19148.1|
            Pentatricopeptide repeat (PPR) superfamily protein
            isoform 3 [Theobroma cacao] gi|508727252|gb|EOY19149.1|
            Pentatricopeptide repeat (PPR) superfamily protein
            isoform 3 [Theobroma cacao]
          Length = 503

 Score =  259 bits (662), Expect = 1e-66
 Identities = 119/251 (47%), Positives = 176/251 (70%), Gaps = 5/251 (1%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DM+AKCG+I ++ E+F +M  +D+V WN+ I GLA+NG  K A  LF +M+++GV P+  
Sbjct: 174  DMFAKCGSIAQAFEIFKRMKEKDLVVWNAAISGLAMNGHVKAAFGLFSQMEKSGVLPNGN 233

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TF+GLL  CTH GLV  G  +++SM   + +TP +EHY CMVDL  ++G L EA++LI  
Sbjct: 234  TFIGLLCCCTHVGLVDDGHRYFDSMSRVFSLTPTIEHYGCMVDLLGRAGLLDEAHQLIKN 293

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            M +E N ++WG LL  CR+H + +L E  ++KL+ LEP NSGNYVLL NIY+++ +W  A
Sbjct: 294  MPMEANSIVWGALLGGCRLHKDTQLVEHVLKKLIELEPWNSGNYVLLSNIYSASHKWDDA 353

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAGYL 397
             K+R++M E+G+QK   YSW E++G +H+FL+G+ SHP S+ IY  +  L+ +L+ AGY+
Sbjct: 354  AKIRSIMNERGIQKVPGYSWIEVNGFVHEFLVGDKSHPLSEMIYTKLGELAKELKAAGYV 413

Query: 396  PK-----FDLE 379
            P      FD+E
Sbjct: 414  PTTEYVLFDIE 424



 Score =  103 bits (257), Expect = 1e-19
 Identities = 54/147 (36%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMYAKCGN+ K+R  FD +  +DIVTW++MI G A NG  K+A+DLF +M++  + P   
Sbjct: 73   DMYAKCGNMEKARLAFDGIPEKDIVTWSTMIQGYASNGLPKEALDLFFQMQKEKLAPDCY 132

Query: 936  TFVGLLTACTHAGLVYLGCEFYESM-RTDYDMTPRVEHYACMVDLFCKSGRLGEAYELIT 760
              VG+L+AC   G + LG    + M R ++   P +     ++D+F K G + +A+E+  
Sbjct: 133  VMVGVLSACARLGALELGDWASKLMDRAEFLSNPVLG--TALIDMFAKCGSIAQAFEIFK 190

Query: 759  KMEVEPNVVIWGTLLSACRIHLNVELA 679
            +M+ E ++V+W   +S   ++ +V+ A
Sbjct: 191  RMK-EKDLVVWNAAISGLAMNGHVKAA 216


>ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            1 [Theobroma cacao] gi|590566803|ref|XP_007010337.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 1 [Theobroma cacao]
            gi|508727249|gb|EOY19146.1| Pentatricopeptide repeat
            (PPR) superfamily protein, putative isoform 1 [Theobroma
            cacao] gi|508727250|gb|EOY19147.1| Pentatricopeptide
            repeat (PPR) superfamily protein, putative isoform 1
            [Theobroma cacao]
          Length = 688

 Score =  259 bits (662), Expect = 1e-66
 Identities = 119/251 (47%), Positives = 176/251 (70%), Gaps = 5/251 (1%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DM+AKCG+I ++ E+F +M  +D+V WN+ I GLA+NG  K A  LF +M+++GV P+  
Sbjct: 359  DMFAKCGSIAQAFEIFKRMKEKDLVVWNAAISGLAMNGHVKAAFGLFSQMEKSGVLPNGN 418

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TF+GLL  CTH GLV  G  +++SM   + +TP +EHY CMVDL  ++G L EA++LI  
Sbjct: 419  TFIGLLCCCTHVGLVDDGHRYFDSMSRVFSLTPTIEHYGCMVDLLGRAGLLDEAHQLIKN 478

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            M +E N ++WG LL  CR+H + +L E  ++KL+ LEP NSGNYVLL NIY+++ +W  A
Sbjct: 479  MPMEANSIVWGALLGGCRLHKDTQLVEHVLKKLIELEPWNSGNYVLLSNIYSASHKWDDA 538

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAGYL 397
             K+R++M E+G+QK   YSW E++G +H+FL+G+ SHP S+ IY  +  L+ +L+ AGY+
Sbjct: 539  AKIRSIMNERGIQKVPGYSWIEVNGFVHEFLVGDKSHPLSEMIYTKLGELAKELKAAGYV 598

Query: 396  PK-----FDLE 379
            P      FD+E
Sbjct: 599  PTTEYVLFDIE 609



 Score =  103 bits (257), Expect = 1e-19
 Identities = 54/147 (36%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMYAKCGN+ K+R  FD +  +DIVTW++MI G A NG  K+A+DLF +M++  + P   
Sbjct: 258  DMYAKCGNMEKARLAFDGIPEKDIVTWSTMIQGYASNGLPKEALDLFFQMQKEKLAPDCY 317

Query: 936  TFVGLLTACTHAGLVYLGCEFYESM-RTDYDMTPRVEHYACMVDLFCKSGRLGEAYELIT 760
              VG+L+AC   G + LG    + M R ++   P +     ++D+F K G + +A+E+  
Sbjct: 318  VMVGVLSACARLGALELGDWASKLMDRAEFLSNPVLG--TALIDMFAKCGSIAQAFEIFK 375

Query: 759  KMEVEPNVVIWGTLLSACRIHLNVELA 679
            +M+ E ++V+W   +S   ++ +V+ A
Sbjct: 376  RMK-EKDLVVWNAAISGLAMNGHVKAA 401



 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 38/133 (28%), Positives = 76/133 (57%)
 Frame = -3

Query: 1113 MYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDIT 934
            +YAKCG + ++ ++FD +  +++V+W +MI G    G  ++A+++F ++ E G++P   +
Sbjct: 158  LYAKCGCLDRAIKVFDDIPEKNVVSWTAMISGYIDVGRYREAVNMFSKLLEMGLRPDSFS 217

Query: 933  FVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKM 754
             V +L AC H G +  G E+ +   T + ++  V     +VD++ K G + +A  L    
Sbjct: 218  LVRVLAACAHLGDLNSG-EWIDRSITQFGLSRDVFVATSVVDMYAKCGNMEKA-RLAFDG 275

Query: 753  EVEPNVVIWGTLL 715
              E ++V W T++
Sbjct: 276  IPEKDIVTWSTMI 288


>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222855145|gb|EEE92692.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 619

 Score =  259 bits (661), Expect = 2e-66
 Identities = 116/244 (47%), Positives = 173/244 (70%)
 Frame = -3

Query: 1116 DMYAKCGNIRKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDI 937
            DMYAKCG +  + E+F  M  +DIV WN+ I GLA++G  K A  LF +M+++G++P   
Sbjct: 290  DMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGN 349

Query: 936  TFVGLLTACTHAGLVYLGCEFYESMRTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITK 757
            TFVGLL ACTHAGLV  G +++ SM   + +TP +EHY CMVDL  ++G L EA++L+  
Sbjct: 350  TFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKS 409

Query: 756  MEVEPNVVIWGTLLSACRIHLNVELAELSVEKLLVLEPENSGNYVLLYNIYASTGRWQKA 577
            M +E N ++WG LL  CR+H + +L E  +++L+ LEP NSGNYVLL NIY+++ +W+ A
Sbjct: 410  MPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDA 469

Query: 576  LKVRNLMMEKGVQKTAAYSWTEIDGLLHKFLIGEASHPRSDEIYNVVDGLSLQLQWAGYL 397
             K+R++M E+G++K   YSW E+DG++H+FL+G+ SHP S++IY  +  L   L+ +GY+
Sbjct: 470  AKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYV 529

Query: 396  PKFD 385
            P  D
Sbjct: 530  PTTD 533



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
 Frame = -3

Query: 1089 RKSRELFDQMAHRDIVTWNSMIGGLAVNGFAKDAIDLFMEMKETGVKPSDITFVGLLTAC 910
            R++  +FD M  +DIV+W+SMI G A NG  K+A+DLF +M   G +P     VG+L AC
Sbjct: 198  RRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCAC 257

Query: 909  THAGLVYLGCEFYESM-RTDYDMTPRVEHYACMVDLFCKSGRLGEAYELITKMEVEPNVV 733
               G + LG      M R ++   P +     ++D++ K GR+  A+E+   M  + ++V
Sbjct: 258  ARLGALELGNWASNLMDRNEFLGNPVLG--TALIDMYAKCGRMDSAWEVFRGMR-KKDIV 314

Query: 732  IWGTLLSACRIHLNVELA 679
            +W   +S   +  +V+ A
Sbjct: 315  VWNAAISGLAMSGHVKAA 332