BLASTX nr result

ID: Sinomenium21_contig00009080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00009080
         (1518 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276478.2| PREDICTED: uncharacterized protein LOC100263...    92   6e-16
emb|CAN82262.1| hypothetical protein VITISV_009280 [Vitis vinifera]    92   6e-16
dbj|BAB70512.1| Myb [Nicotiana tabacum]                                73   3e-10
ref|XP_006358883.1| PREDICTED: transcription factor MYB28-like i...    71   1e-09
ref|XP_002304479.2| hypothetical protein POPTR_0003s12390g, part...    65   8e-08
emb|CBI34732.3| unnamed protein product [Vitis vinifera]               64   2e-07
ref|XP_007219491.1| hypothetical protein PRUPE_ppa022218mg [Prun...    62   9e-07
ref|XP_002308158.2| MYB transcription factor R3 type family prot...    61   2e-06
ref|XP_004245633.1| PREDICTED: uncharacterized protein LOC101266...    59   6e-06
emb|CAD98760.1| MYB transcription factor R3 type [Populus tremul...    58   1e-05

>ref|XP_002276478.2| PREDICTED: uncharacterized protein LOC100263258 [Vitis vinifera]
          Length = 606

 Score = 92.0 bits (227), Expect = 6e-16
 Identities = 76/240 (31%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
 Frame = -3

Query: 1117 DSRFNSECNYLPSSLSVCEFGSDTGGVPRQGKVPASHLQSEEMSYCSLFYNSPPVKNLTH 938
            D RF+SE     SSLS   FG D   V ++ K+ ++ LQSE +      Y     K+L  
Sbjct: 388  DLRFSSETGDSLSSLSAFRFGDDDTQVGKKSKLNSTPLQSEHIKNSWFCYEPIHSKDLLV 447

Query: 937  GGSS----STKNCIQPTGSPAGFSTPPSCMRSISVNGSNPDPDSILRNAAKSF-TTPSII 773
               +    ST N  + + SP+   T P   +S+S+N  +P+  SILR++A SF  TPSII
Sbjct: 448  ASKNDCFPSTDNHTRYSSSPSCGFTTPKVAQSVSINSRSPE--SILRSSAMSFRNTPSII 505

Query: 772  RKRKRATSRIITNGNGHHGFCTPDVRSSRN-KDMQDSTHSCPPVCGVQDDLNSTDLSNVK 596
            RKR   TSR                +SS N  D      + P     +D  +S    N K
Sbjct: 506  RKR---TSR----------------KSSNNFSDCSTPAQTVPCTQNGEDINSSKAFPNAK 546

Query: 595  WXXXXXXXXXXXXXXXXSVEKCLEHEFDMEWDKSKAKCNTLATASDSSDANHGTNSGVTP 416
                             ++ +CLE+ FDMEWD S+ KC T  +++ + D N   N  + P
Sbjct: 547  QGLVASLCKPEAPVSVKTLGRCLEYAFDMEWDPSRVKCGTSVSSTATPDVNFSANRVLIP 606


>emb|CAN82262.1| hypothetical protein VITISV_009280 [Vitis vinifera]
          Length = 579

 Score = 92.0 bits (227), Expect = 6e-16
 Identities = 75/240 (31%), Positives = 110/240 (45%), Gaps = 6/240 (2%)
 Frame = -3

Query: 1117 DSRFNSECNYLPSSLSVCEFGSDTGGVPRQGKVPASHLQSEEMSYCSLFYNSPPVKNLTH 938
            D RF+SE     SSLS   FG D   V ++ K+ ++ LQS  + +    Y    +K+L  
Sbjct: 361  DLRFSSETGDSLSSLSAFRFGDDDTQVGKKSKLNSTPLQSGHIKHSWFCYEPIHLKDLLV 420

Query: 937  GGSS----STKNCIQPTGSPAGFSTPPSCMRSISVNGSNPDPDSILRNAAKSF-TTPSII 773
               +    ST N  + + SP+   T P   +S+S+N  +P+  SILR++A SF  TPSII
Sbjct: 421  ASKNDCFPSTDNHTRYSSSPSCGFTTPKVAQSVSINSRSPE--SILRSSAMSFRNTPSII 478

Query: 772  RKRKRATSRIITNGNGHHGFCTPDVRSSRN-KDMQDSTHSCPPVCGVQDDLNSTDLSNVK 596
            RKR   TSR                +SS N  D      + P     +D  +S    N K
Sbjct: 479  RKR---TSR----------------KSSNNFSDCSTPAQTVPCTQNGEDINSSKAFPNAK 519

Query: 595  WXXXXXXXXXXXXXXXXSVEKCLEHEFDMEWDKSKAKCNTLATASDSSDANHGTNSGVTP 416
                             ++ +CLE+ FDMEWD S+ KC T  +++ + D N   N  + P
Sbjct: 520  QGFVSSLCKPEAPVSVKTLGRCLEYAFDMEWDPSRVKCGTSVSSTATPDVNFSANRVLIP 579


>dbj|BAB70512.1| Myb [Nicotiana tabacum]
          Length = 588

 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 80/300 (26%), Positives = 124/300 (41%), Gaps = 5/300 (1%)
 Frame = -3

Query: 1300 RYSSEYVMSASSTNVPSDVNFSSRKNFISPGIVFPVSANLLHESPQKLCQFXXXXXXXXX 1121
            R    Y +SASS++ P D    +  +      V P +   ++ESP++             
Sbjct: 331  RTKISYPLSASSSDFPLDQLHHTSWSTSQVEAVHPTTFRSMYESPKR-----------SR 379

Query: 1120 MDSRFNSECNYLPSSLSVCEFGSDTGGVPRQGKVPASHLQSEEMSYCSLFYNSPPVKN-- 947
             D+  +  C++L  SLS+  F        ++ K   +          SL+Y  P +K+  
Sbjct: 380  HDTVNDPNCDFL--SLSLASFTEVHSQSTKKNKAYDTQSSLGLKQQGSLYYEPPQLKDMM 437

Query: 946  --LTHGGSSSTKNCIQPTGSPAGFSTPPSCMRSISVNGSNPDPDSILRNAAKSFT-TPSI 776
              LT    S      Q  G P   STPPS   ++S NGS+P+  S+LRN+A S+T TPSI
Sbjct: 438  IPLTDENLSRDDLIRQQNGHPF-CSTPPSLKLTVSANGSSPE--SVLRNSAMSYTRTPSI 494

Query: 775  IRKRKRATSRIITNGNGHHGFCTPDVRSSRNKDMQDSTHSCPPVCGVQDDLNSTDLSNVK 596
            IRK+        T+     G  +P     R  D +D+++      G +   +   L    
Sbjct: 495  IRKKNSRFPEAATHSR-CTGTTSPTHIFPRASDREDTSNLKDRFSGCKSSASGKSLG--- 550

Query: 595  WXXXXXXXXXXXXXXXXSVEKCLEHEFDMEWDKSKAKCNTLATASDSSDANHGTNSGVTP 416
                                + LE+ FDMEWD S  +C T  +A+       G N+ +TP
Sbjct: 551  --------------------RRLEYAFDMEWDAS--RCCTPVSAASPCALRLGGNTMLTP 588


>ref|XP_006358883.1| PREDICTED: transcription factor MYB28-like isoform X1 [Solanum
            tuberosum] gi|565386118|ref|XP_006358884.1| PREDICTED:
            transcription factor MYB28-like isoform X2 [Solanum
            tuberosum]
          Length = 586

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 88/298 (29%), Positives = 134/298 (44%), Gaps = 8/298 (2%)
 Frame = -3

Query: 1285 YVMSASSTNVPSDVNFSSRKNFISPGIVFPVSANLLHESPQKLCQFXXXXXXXXXMDSRF 1106
            Y +  SS NVP D + ++R +      V P S   ++ESP++              D+  
Sbjct: 335  YPLLDSSLNVPLDPSHNTRWSSSQVEAVRPTSFGSMYESPKR-----------SRYDAVN 383

Query: 1105 NSECNYLPSSLSVCEFGSDTGGVPRQGKVPASHLQSEEMSYCSLFYNSPPVKNL---THG 935
            + + ++L  SLS+  F   + G  ++ K   +           L+Y  P VK+L   +  
Sbjct: 384  DPDHDFL--SLSLAAFTEVSHG-NKKNKTYDTQSSLALNQPGRLYYEPPKVKDLMISSMD 440

Query: 934  GSSSTKNCI-QPTGSPAGFSTPPSCMRSISVNGSNPDPDSILRNAAKSFT-TPSIIRKRK 761
             + S  N I Q  G P   STPPS   ++S NGS+  P+S+LRN+A S+T TPSIIRK+ 
Sbjct: 441  ENLSKDNFIGQHHGHPL-CSTPPSLKLTVSANGSS--PESVLRNSAMSYTKTPSIIRKK- 496

Query: 760  RATSRIITNGNGHH---GFCTPDVRSSRNKDMQDSTHSCPPVCGVQDDLNSTDLSNVKWX 590
              TSR I   +GH    G  TP        D +DS++    + G +  ++   L      
Sbjct: 497  --TSR-IAEASGHSSCTGSTTPMHFLESVPDREDSSNLKDRISGCKRSVSGKSLG----- 548

Query: 589  XXXXXXXXXXXXXXXSVEKCLEHEFDMEWDKSKAKCNTLATASDSSDANHGTNSGVTP 416
                              + LE+ FDMEWD S++ C T  +A        G N+ +TP
Sbjct: 549  ------------------RRLEYAFDMEWDSSRS-C-TPVSAVPPCGLTLGANTMLTP 586


>ref|XP_002304479.2| hypothetical protein POPTR_0003s12390g, partial [Populus trichocarpa]
            gi|550343036|gb|EEE79458.2| hypothetical protein
            POPTR_0003s12390g, partial [Populus trichocarpa]
          Length = 419

 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 52/136 (38%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
 Frame = -3

Query: 1042 GVPRQGKVPASHLQSEEMSYCSLFYNSPPVK----NLTHGGSSSTKNCIQPTGSPAGFST 875
            G+ ++ +V   H+Q+EE S   L + S  +     NL  G   S   C+    SP   ST
Sbjct: 230  GIGKKNEVRKLHMQAEETSQNCLHHESQQLSTLVCNLDAGEVPSMDTCVMHPISPFCCST 289

Query: 874  PPSCMRSISVNGSNPDPDSILRNAAKSF-TTPSIIRKRKRATSRIITNGNGHHGFCTPDV 698
            P    RSISVN ++  P+SILRN+A++F  TPSIIRKR    + I    +     CTP  
Sbjct: 290  PTKYARSISVNSTS--PESILRNSARTFKNTPSIIRKRALRGAAIAKISD---VTCTPSS 344

Query: 697  RSSRNKDMQ--DSTHS 656
            + S   D Q  DST+S
Sbjct: 345  KFSCPDDFQIVDSTNS 360


>emb|CBI34732.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
 Frame = -3

Query: 1117 DSRFNSECNYLPSSLSVCEFGSDTGGVPRQGKVPASHLQSEEMSYCSLFYNSPPVKNLTH 938
            D RF+SE     SSLS   FG D   V ++ K+ ++ LQSE +      Y     K+L  
Sbjct: 387  DLRFSSETGDSLSSLSAFRFGDDDTQVGKKSKLNSTPLQSEHIKNSWFCYEPIHSKDLLV 446

Query: 937  GGSS----STKNCIQPTGSPAGFSTPPSCMRSISVNGSNPDPDSILRNAAKSF-TTPSII 773
               +    ST N  + + SP+   T P   +S+S+N  +  P+SILR++A SF  TPSII
Sbjct: 447  ASKNDCFPSTDNHTRYSSSPSCGFTTPKVAQSVSINSRS--PESILRSSAMSFRNTPSII 504

Query: 772  RKRKRATSRIITN 734
            RKR   TSR  +N
Sbjct: 505  RKR---TSRKSSN 514


>ref|XP_007219491.1| hypothetical protein PRUPE_ppa022218mg [Prunus persica]
           gi|462415953|gb|EMJ20690.1| hypothetical protein
           PRUPE_ppa022218mg [Prunus persica]
          Length = 567

 Score = 61.6 bits (148), Expect = 9e-07
 Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
 Frame = -3

Query: 946 LTHGGSSSTKNCIQPTGSPAGFSTPPSCMRSISVNGSNPDPDSILRNAAKSFT-TPSIIR 770
           L +G   ST + IQ   S   F TP S    I V+ ++PD  S LR+AA++F  +PSIIR
Sbjct: 418 LENGEFPSTDSYIQTECSSVSFCTPTSHDTRIFVDCNSPD--STLRSAARTFEKSPSIIR 475

Query: 769 KRKRATSRIITNGNGHHGFCTPDVRSSRNKDMQDSTHSCPPVCGVQDDLNSTDLSNVKWX 590
           KR+ + SR   N   H         S  +K++ ++  + P + G+     +   S V   
Sbjct: 476 KRRHSVSRKSVNAANHGD-------SVCSKEISNNFRNSPHLLGLSPCGKTNSSSMVH-- 526

Query: 589 XXXXXXXXXXXXXXXSVEKCLEHEFDMEWDKSKAKCNTLA 470
                          SVEK LEH FD+EWD + A   TL+
Sbjct: 527 SPPRSQKFGDSAVMKSVEKRLEHAFDVEWDSASAVSRTLS 566


>ref|XP_002308158.2| MYB transcription factor R3 type family protein [Populus trichocarpa]
            gi|550335793|gb|EEE91681.2| MYB transcription factor R3
            type family protein [Populus trichocarpa]
          Length = 549

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
 Frame = -3

Query: 1075 LSVCEFGSDTGGVPRQGKVPASHLQSEEMSYCSLFYNSPPVKNL----THGGSSSTKNCI 908
            LS C+  S       Q K   S LQ +  +Y SL+Y  P V+ L    ++ GS   +N  
Sbjct: 317  LSCCDSESQQKFEDHQDKGIGSGLQFDRSTYGSLYYEPPLVEQLDSYPSNMGSVQHENNS 376

Query: 907  QPTGSPAGFSTPPSCMRSISVNGSNPDPDSILRNAAKSF-TTPSIIRKRKRATSRIITNG 731
             P  SP  F TPP C++S  ++  +  P+SILR AA SF  TPSI RKRK A   ++ + 
Sbjct: 377  CPVSSPIIFFTPP-CVKSRDLSAQS--PESILRIAAMSFPNTPSIFRKRKTAQVDLLPSK 433

Query: 730  NGHHG 716
             G  G
Sbjct: 434  IGKVG 438


>ref|XP_004245633.1| PREDICTED: uncharacterized protein LOC101266438 [Solanum
           lycopersicum]
          Length = 586

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 62/195 (31%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
 Frame = -3

Query: 976 LFYNSPPVKNLTHGGSS---STKNCI-QPTGSPAGFSTPPSCMRSISVNGSNPDPDSILR 809
           L Y  P VK+L         S  N I Q  G P   STPPS   ++S NGS+P+  S+LR
Sbjct: 424 LCYEPPKVKDLMISSMDEKLSKDNFIGQHHGHPL-CSTPPSLKLTVSANGSSPE--SVLR 480

Query: 808 NAAKSFT-TPSIIRKRKRATSRIITNGNGHH---GFCTPDVRSSRNKDMQDSTHSCPPVC 641
           N+A S+T TPSIIRK+       I   +GH    G  TP        D +DS++    + 
Sbjct: 481 NSAMSYTKTPSIIRKKNSR----IAEASGHSSCTGSTTPMHFLGSVPDREDSSNLKDRIS 536

Query: 640 GVQDDLNSTDLSNVKWXXXXXXXXXXXXXXXXSVEKCLEHEFDMEWDKSKAKCNTLATAS 461
           G +  ++   L                        + LE+ FD+EWD S++ C T  +A 
Sbjct: 537 GCKRSVSGKSLG-----------------------RRLEYAFDVEWDSSRS-C-TPVSAV 571

Query: 460 DSSDANHGTNSGVTP 416
                  G N+ +TP
Sbjct: 572 PPCGLTLGANTMLTP 586


>emb|CAD98760.1| MYB transcription factor R3 type [Populus tremula x Populus
            tremuloides]
          Length = 530

 Score = 58.2 bits (139), Expect = 1e-05
 Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
 Frame = -3

Query: 1030 QGKVPASHLQSEEMSYCSLFYNSPPVKNL----THGGSSSTKNCIQPTGSPAGFSTPPSC 863
            Q K   S LQ +  +Y SL+Y  P V+ L    ++ GS   +N   P  SP  F TPP C
Sbjct: 313  QDKGIGSGLQFDRSTYGSLYYEPPLVEQLDSYPSNTGSVQHENNSCPVSSPIIFFTPP-C 371

Query: 862  MRSISVNGSNPDPDSILRNAAKSF-TTPSIIRKRKRATSRIITNGNGHHG 716
            ++S  ++  +P+  SILR AA SF  TPSI RKRK A   ++ +  G  G
Sbjct: 372  VKSRDLSAQSPE--SILRIAAMSFPNTPSIFRKRKTAQVDLLPSKIGKAG 419


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