BLASTX nr result
ID: Sinomenium21_contig00009028
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00009028
(1365 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma ... 429 e-117
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i... 418 e-114
ref|XP_007144255.1| hypothetical protein PHAVU_007G141100g [Phas... 417 e-114
ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [... 416 e-114
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 414 e-113
emb|CBI31382.3| unnamed protein product [Vitis vinifera] 414 e-113
ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like i... 414 e-113
gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis] 412 e-112
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [... 412 e-112
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t... 410 e-112
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i... 407 e-111
ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutr... 403 e-109
ref|XP_006288156.1| hypothetical protein CARUB_v10001394mg [Caps... 402 e-109
ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arab... 401 e-109
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu... 400 e-109
ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]... 399 e-108
ref|XP_002532622.1| Far upstream element-binding protein, putati... 397 e-108
ref|XP_006843101.1| hypothetical protein AMTR_s00140p00057330 [A... 395 e-107
ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6... 394 e-107
ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1... 392 e-106
>ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
gi|508726977|gb|EOY18874.1| Binding to TOMV RNA 1L
isoform 2 [Theobroma cacao]
Length = 334
Score = 429 bits (1103), Expect = e-117
Identities = 222/314 (70%), Positives = 257/314 (81%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P KS S+ EK YIRFLVSNAAAGSVIGKGGSTITEFQS+SGARIQLSRN EFF
Sbjct: 18 RSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFF 77
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGTSDRIIMISG E++KA EL+L+KLL+E+++ED DDV+ R+KVRLIVPNSSC
Sbjct: 78 PGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIG 137
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
ATIKSFIEDSQAGIKISPQD+N+ GLNDRLVTLTG+L+EQMRAI LILSKL ED HY
Sbjct: 138 KGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHY 197
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
Q+M PFSYAG+ SGF G PY Y++PSV YN+++Y NG+GG+ Q++K+DRSNS+
Sbjct: 198 LQAMHAPFSYAGIFFSGFHGIPYAYVLPSVATATYNSMSYPSNGAGGKFQNHKEDRSNSV 257
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVAD HI +IMEISQ+SGARIKISDRGDFMSGT+DRKVTITGSQ AIR A
Sbjct: 258 TIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQA 317
Query: 999 ESMIMQKVASASER 1040
ESMIMQKVA A++R
Sbjct: 318 ESMIMQKVAYATDR 331
>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
Length = 337
Score = 418 bits (1074), Expect = e-114
Identities = 215/311 (69%), Positives = 254/311 (81%), Gaps = 1/311 (0%)
Frame = +3
Query: 117 KSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDR 296
KS + D +EK YIRFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRN EFFPGT+DR
Sbjct: 25 KSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDR 84
Query: 297 IIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXXATI 476
IIM+SG EI +A EL+LSKLLSE+H ED +D + ++KVRL+VPN SC ATI
Sbjct: 85 IIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATI 144
Query: 477 KSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSG 656
+SFIEDSQAGIKISPQD+NY G NDRLVTLTGS +EQMRAI LI+SKL ED HY+QSM+
Sbjct: 145 RSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNS 204
Query: 657 PFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNG-SGGRSQSNKDDRSNSMTIGVA 833
PFSY GV SG+ G PY Y++PSV AYNA+NY PNG +GG+ Q++K++RSNS+T+GVA
Sbjct: 205 PFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVA 264
Query: 834 DEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIM 1013
DEHI +IMEISQ SGARIKISDRGD++SGT+DRKVTITGSQ AIR AESMI+
Sbjct: 265 DEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMIL 324
Query: 1014 QKVASASEREI 1046
QKVA A+ER +
Sbjct: 325 QKVAYATERGV 335
>ref|XP_007144255.1| hypothetical protein PHAVU_007G141100g [Phaseolus vulgaris]
gi|561017445|gb|ESW16249.1| hypothetical protein
PHAVU_007G141100g [Phaseolus vulgaris]
Length = 335
Score = 417 bits (1073), Expect = e-114
Identities = 215/310 (69%), Positives = 253/310 (81%)
Frame = +3
Query: 117 KSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDR 296
KS + D +EK YIRFLVSN+AAGSVIGKGGSTITEFQSQSGARIQLSRN EFFPGT+DR
Sbjct: 25 KSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTTDR 84
Query: 297 IIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXXATI 476
IIM+SG EI+ A L+LSKLLSE+H ED ++ + ++KVRLIVPN SC ATI
Sbjct: 85 IIMVSGAINEILTAVGLILSKLLSELHTEDDNEAEPKTKVRLIVPNGSCGGIIGKGGATI 144
Query: 477 KSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSG 656
+SFIEDSQAGIKISPQD+NY G NDRLVTLTG+LEEQ+RAI LI+SKL ED YSQSM+
Sbjct: 145 RSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGTLEEQIRAIELIVSKLAEDPQYSQSMNS 204
Query: 657 PFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSMTIGVAD 836
PFSY GV SG+ G PY Y++PSV AYNA+NY PNG+G + Q++K++RSNSMT+GVAD
Sbjct: 205 PFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAGAKFQNSKEERSNSMTMGVAD 264
Query: 837 EHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIMQ 1016
EHI +I+EISQVSGARIKISDRGD++SGT+DRKVTITG+Q AIR AESMI+Q
Sbjct: 265 EHIGLVVGRGGRNIIEISQVSGARIKISDRGDYISGTTDRKVTITGAQRAIRTAESMILQ 324
Query: 1017 KVASASEREI 1046
KVA A+ER I
Sbjct: 325 KVAYATERVI 334
>ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [Fragaria vesca subsp.
vesca]
Length = 344
Score = 416 bits (1070), Expect = e-114
Identities = 220/323 (68%), Positives = 258/323 (79%), Gaps = 9/323 (2%)
Frame = +3
Query: 105 PGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPG 284
P KS ASD EK Y+RFLVSNAAAGSVIGKGG+TIT+FQSQSGARIQLSRN EFFPG
Sbjct: 21 PPPPKSPASDTTEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNHEFFPG 80
Query: 285 TSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXX 464
T+DRIIMISG EI+KA ELVL+KLL+E++ E+ +DV+ R+K+RLIVPNSSC
Sbjct: 81 TTDRIIMISGTINEILKAVELVLAKLLNELYSEESEDVEPRTKLRLIVPNSSCGGIIGKQ 140
Query: 465 XATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQ 644
+TIKSFIE+SQAGIKISPQD+NY G+NDRLVTLTG+L+EQMRA LILSKL EDSHY+Q
Sbjct: 141 GSTIKSFIEESQAGIKISPQDNNYFGVNDRLVTLTGTLDEQMRAADLILSKLSEDSHYTQ 200
Query: 645 SMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYG-------PNGSGGRSQSNKDD 803
SM+ PFSY GV SGF G PY Y++PSV AYNA++YG PNG+ G+ Q+NK+D
Sbjct: 201 SMNAPFSYPGVFFSGFHGIPYTYVLPSVSTAAYNAVSYGPPPPNGPPNGAAGKFQNNKED 260
Query: 804 R--SNSMTIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGS 977
R +NS+TIGVAD HI +IMEISQ SGARIKISDRGDFMSGT+DRKVTITGS
Sbjct: 261 RNNNNSVTIGVADSHIGLVVGRGGRTIMEISQGSGARIKISDRGDFMSGTTDRKVTITGS 320
Query: 978 QAAIRAAESMIMQKVASASEREI 1046
Q +I+ AE+MIMQKV ASER +
Sbjct: 321 QRSIQVAETMIMQKVNYASERAL 343
>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 414 bits (1064), Expect = e-113
Identities = 224/314 (71%), Positives = 246/314 (78%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
KR +S SD EK+ YIRFLVSNAAAGSVIGKGGSTI +FQSQSGARIQLSRN EFF
Sbjct: 17 KRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 76
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGTSDRIIMISG EIIKA EL+L+KLLSE+H EDGD+ D RSKVRLIVPNSSC
Sbjct: 77 PGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIG 136
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
+TIKSFIEDSQA IKISPQD+NY+GL DRLVTL GSLEEQMRAI LILSKL ED HY
Sbjct: 137 KGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHY 196
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
+Q M+ PFSY A AYN++NYGPNG+GG+ Q+NK+DRSNS+
Sbjct: 197 TQFMNAPFSY---------------------AAAYNSMNYGPNGAGGKFQNNKEDRSNSV 235
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVADEHI +IM+ISQ SGARIKISDRGDFMSGT+DRKVTITGSQ AIRAA
Sbjct: 236 TIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAA 295
Query: 999 ESMIMQKVASASER 1040
ESMIMQKVASASER
Sbjct: 296 ESMIMQKVASASER 309
>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 414 bits (1064), Expect = e-113
Identities = 224/314 (71%), Positives = 246/314 (78%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
KR +S SD EK+ YIRFLVSNAAAGSVIGKGGSTI +FQSQSGARIQLSRN EFF
Sbjct: 65 KRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 124
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGTSDRIIMISG EIIKA EL+L+KLLSE+H EDGD+ D RSKVRLIVPNSSC
Sbjct: 125 PGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIG 184
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
+TIKSFIEDSQA IKISPQD+NY+GL DRLVTL GSLEEQMRAI LILSKL ED HY
Sbjct: 185 KGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHY 244
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
+Q M+ PFSY A AYN++NYGPNG+GG+ Q+NK+DRSNS+
Sbjct: 245 TQFMNAPFSY---------------------AAAYNSMNYGPNGAGGKFQNNKEDRSNSV 283
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVADEHI +IM+ISQ SGARIKISDRGDFMSGT+DRKVTITGSQ AIRAA
Sbjct: 284 TIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAA 343
Query: 999 ESMIMQKVASASER 1040
ESMIMQKVASASER
Sbjct: 344 ESMIMQKVASASER 357
>ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Cicer
arietinum]
Length = 337
Score = 414 bits (1063), Expect = e-113
Identities = 207/314 (65%), Positives = 255/314 (81%)
Frame = +3
Query: 105 PGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPG 284
P S D EK Y+RFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRN EFFPG
Sbjct: 23 PPPKSPSQDDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPG 82
Query: 285 TSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXX 464
T+DRIIM+SG EI++A EL+LSKLL+E+H ED +DV+ ++KVRLIVPN SC
Sbjct: 83 TTDRIIMVSGAINEILRAVELILSKLLTELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKG 142
Query: 465 XATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQ 644
ATI+SFIEDSQAGIKISPQD++Y G NDR+V++TG+L+EQMRA+ LI+SKL ED HYSQ
Sbjct: 143 GATIRSFIEDSQAGIKISPQDNSYYGQNDRIVSVTGTLDEQMRAVDLIVSKLAEDPHYSQ 202
Query: 645 SMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSMTI 824
SM+ PFSY+GV + G+ G PY Y++PSV AYN++NY PNG+ G+ Q++K++RSNSMTI
Sbjct: 203 SMNSPFSYSGVYVPGYQGVPYTYVLPSVAPPAYNSVNYRPNGAAGKFQNSKEERSNSMTI 262
Query: 825 GVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAES 1004
G+ADEHI +I +I+QVSGA+IKISDRGD++SGT+DRKVTITGSQ AIR AES
Sbjct: 263 GIADEHIGLVVGRGGRNIADITQVSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAES 322
Query: 1005 MIMQKVASASEREI 1046
MIMQKVA A+ER +
Sbjct: 323 MIMQKVAYATERVV 336
>gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]
Length = 349
Score = 412 bits (1060), Expect = e-112
Identities = 215/303 (70%), Positives = 249/303 (82%)
Frame = +3
Query: 132 DDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDRIIMIS 311
+ E+ AYI+FLVSNAAAGSVIGKGG+TIT+FQS+SGARIQLSRN EFFPGT+DRIIMIS
Sbjct: 44 ESMERPAYIKFLVSNAAAGSVIGKGGATITDFQSKSGARIQLSRNHEFFPGTTDRIIMIS 103
Query: 312 GEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXXATIKSFIE 491
G EIIKA ELVL+KLLSE+ E+ +DVD R K+RL+VPN SC +TIKSFIE
Sbjct: 104 GAINEIIKAMELVLAKLLSELQTEEENDVDPRKKLRLVVPNGSCGGIIGKGGSTIKSFIE 163
Query: 492 DSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSGPFSYA 671
+SQAGIKISPQD+NY+G+NDRLVTLTG+L+EQMRAI LILSKL ED HY+QSM+ PFSY
Sbjct: 164 ESQAGIKISPQDNNYLGINDRLVTLTGTLDEQMRAIDLILSKLAEDPHYTQSMNAPFSYP 223
Query: 672 GVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSMTIGVADEHIXX 851
GV SG G PY +++PSV +YN YGPNG+GG+ Q+NK+DRSNS+TIGVAD HI
Sbjct: 224 GV-FSGIHGTPYPHVLPSVATASYNQTGYGPNGAGGKFQNNKEDRSNSVTIGVADGHIGF 282
Query: 852 XXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIMQKVASA 1031
+IMEISQ SGARIKISDRGDF+SGT+DRKVTITGSQ AI AAESMIMQKVA A
Sbjct: 283 VVGRGGRNIMEISQASGARIKISDRGDFLSGTTDRKVTITGSQRAICAAESMIMQKVAYA 342
Query: 1032 SER 1040
SER
Sbjct: 343 SER 345
Score = 62.8 bits (151), Expect = 3e-07
Identities = 30/87 (34%), Positives = 52/87 (59%)
Frame = +3
Query: 117 KSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDR 296
++ +D + +R +V N + G +IGKGGSTI F +S A I++S + G +DR
Sbjct: 125 QTEEENDVDPRKKLRLVVPNGSCGGIIGKGGSTIKSFIEESQAGIKISPQDNNYLGINDR 184
Query: 297 IIMISGEFAEIIKATELVLSKLLSEIH 377
++ ++G E ++A +L+LSKL + H
Sbjct: 185 LVTLTGTLDEQMRAIDLILSKLAEDPH 211
>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [Glycine max]
Length = 337
Score = 412 bits (1060), Expect = e-112
Identities = 212/311 (68%), Positives = 252/311 (81%), Gaps = 1/311 (0%)
Frame = +3
Query: 117 KSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDR 296
K + D +EK YIRFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRN EFFPGT+DR
Sbjct: 25 KPPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDR 84
Query: 297 IIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXXATI 476
IIM+SG EI +A EL+LSKLLSE+H ED +D + ++KVRL+VPN SC TI
Sbjct: 85 IIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTI 144
Query: 477 KSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSG 656
+SFIEDSQAGIKISPQD+NY G NDRLV LTG+ +EQMRAI LI+SKL ED HY+QSM+
Sbjct: 145 RSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSMNS 204
Query: 657 PFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNG-SGGRSQSNKDDRSNSMTIGVA 833
PFSY GV SG+ G PY Y++PSV AYNA+NY PNG +GG+ Q++K++RSNS+T+GVA
Sbjct: 205 PFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLTMGVA 264
Query: 834 DEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIM 1013
DEHI +IMEISQVSGARIKISDRGD++SGT+DRKVTITGSQ AIR AESMI+
Sbjct: 265 DEHIGLVVGRGGRNIMEISQVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMIL 324
Query: 1014 QKVASASEREI 1046
QKVA A+ER +
Sbjct: 325 QKVAYATERGV 335
>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 410 bits (1055), Expect = e-112
Identities = 206/307 (67%), Positives = 250/307 (81%)
Frame = +3
Query: 120 SSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDRI 299
S + D EK Y+RFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRN EFFPGT+DRI
Sbjct: 26 SPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRI 85
Query: 300 IMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXXATIK 479
IM+SG E+++A EL+LSKLLSE+H ED +DV+ ++KVRLIVPN SC ATI+
Sbjct: 86 IMVSGAINEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIR 145
Query: 480 SFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSGP 659
SFIE+SQAGIKISPQD++Y G NDR+VT+TG+L+EQMR I LI+SKL ED HYS SMS P
Sbjct: 146 SFIEESQAGIKISPQDNSYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSHSMSSP 205
Query: 660 FSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSMTIGVADE 839
F+Y+G +SG+ G PY Y++PSV AYN +NY PNG+G + Q++K+DRSNSMTIGVADE
Sbjct: 206 FTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRPNGTGAKFQNSKEDRSNSMTIGVADE 265
Query: 840 HIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIMQK 1019
HI +I +ISQ SGA+IKISDRGD++SGT+DRKVTITGSQ AIR AESMI+QK
Sbjct: 266 HIGLVVGRGGRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQK 325
Query: 1020 VASASER 1040
VA A+ER
Sbjct: 326 VAYATER 332
>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
Length = 332
Score = 407 bits (1046), Expect = e-111
Identities = 212/311 (68%), Positives = 251/311 (80%), Gaps = 1/311 (0%)
Frame = +3
Query: 117 KSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDR 296
KS + D +EK YIRFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRN EFFPGT+DR
Sbjct: 25 KSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDR 84
Query: 297 IIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXXATI 476
IIM+SG EI +A EL+LSKLLSE+H ED +D + ++KVRL+VPN SC ATI
Sbjct: 85 IIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATI 144
Query: 477 KSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSG 656
+SFIEDSQAGIKISPQD+NY G NDRLVTLTGS +EQMRAI LI+SKL ED HY+QSM+
Sbjct: 145 RSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNS 204
Query: 657 PFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNG-SGGRSQSNKDDRSNSMTIGVA 833
PFSY G+ G PY Y++PSV AYNA+NY PNG +GG+ Q++K++RSNS+T+GVA
Sbjct: 205 PFSY-----PGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVA 259
Query: 834 DEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIM 1013
DEHI +IMEISQ SGARIKISDRGD++SGT+DRKVTITGSQ AIR AESMI+
Sbjct: 260 DEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMIL 319
Query: 1014 QKVASASEREI 1046
QKVA A+ER +
Sbjct: 320 QKVAYATERGV 330
>ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
gi|557099992|gb|ESQ40355.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
Length = 334
Score = 403 bits (1035), Expect = e-109
Identities = 203/314 (64%), Positives = 249/314 (79%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P + SS +D EK +IRFLVSNAAAGSVIGKGGSTITEFQ++SGARIQLSRNQEFF
Sbjct: 18 RSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 77
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGT+DRIIMISG E++ EL+L KL SE+H EDG+DV+ R ++RL+VPNSSC
Sbjct: 78 PGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNDVEPRRRIRLVVPNSSCGGIIG 137
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
ATIKSFIE+S+AGIKISP D+ Y GL+DRLVTL+G+ EEQMRAI LIL+KL D HY
Sbjct: 138 KGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTSDDHY 197
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
SQ++ P+SYAG+ SGF G PY Y++PSV YN++NY PNGSGG+ Q++K++ S +
Sbjct: 198 SQNVHSPYSYAGLFYSGFHGHPYAYVLPSVATAGYNSVNYAPNGSGGKYQNHKEEASTTK 257
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGV+DEHI +IMEI+Q++GARIKISDRGDFMSGT+DRKV+ITGSQ AI+ A
Sbjct: 258 TIGVSDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQA 317
Query: 999 ESMIMQKVASASER 1040
E+MI QKV SASER
Sbjct: 318 ETMIKQKVDSASER 331
>ref|XP_006288156.1| hypothetical protein CARUB_v10001394mg [Capsella rubella]
gi|482556862|gb|EOA21054.1| hypothetical protein
CARUB_v10001394mg [Capsella rubella]
Length = 334
Score = 402 bits (1032), Expect = e-109
Identities = 202/314 (64%), Positives = 251/314 (79%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P + SS +D EK +IRFLVSNAAAGSVIGKGGSTITEFQ++SGARIQLSRNQEFF
Sbjct: 18 RSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 77
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGT+DRIIMISG E++ EL+L KL SE+H EDG++V+ R ++RL+VPNSSC
Sbjct: 78 PGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIG 137
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
ATIKSFIE+S+AGIKISP D+ Y GL+DRLVTL+G+ EEQMRAI LIL+KL ED HY
Sbjct: 138 KGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHY 197
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
SQ++ P+SYAG+ SGF G PY Y++PSV YN++NY PNGSGG+ Q++K++ SN++
Sbjct: 198 SQNVHSPYSYAGLFYSGFHGPPYAYVLPSVATAGYNSVNYAPNGSGGKYQNHKEEPSNTV 257
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGV+DEHI +IMEI+Q++GARIKISDRGDF+SGTSDRKV+ITG Q AI+ A
Sbjct: 258 TIGVSDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFISGTSDRKVSITGPQRAIQQA 317
Query: 999 ESMIMQKVASASER 1040
E+MI QKV SA+ER
Sbjct: 318 ETMIKQKVESATER 331
>ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata] gi|297318987|gb|EFH49409.1| hypothetical protein
ARALYDRAFT_487225 [Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 401 bits (1031), Expect = e-109
Identities = 203/314 (64%), Positives = 249/314 (79%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P + SS +D EK +IRFLVSNAAAGSVIGKGGSTITEFQ++SGARIQLSRNQEFF
Sbjct: 18 RSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 77
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGT+DRIIMISG E+I EL+L KL SE+H EDG++V+ R ++RL+VPNSSC
Sbjct: 78 PGTTDRIIMISGSIKEVINGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIG 137
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
ATIKSFIE+S+AGIKISP D+ + GL+DRLVTL+G+ EEQMRAI LIL+KL ED HY
Sbjct: 138 KGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHY 197
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
SQ++ P+SYAG+ SGF G PY Y +PSV YN++NY PNGSGG+ Q++KD+ S ++
Sbjct: 198 SQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKDEASTTV 257
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVADEHI +IMEI+Q++GARIKISDRGDFMSGT+DRKV+ITG Q AI+ A
Sbjct: 258 TIGVADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMSGTTDRKVSITGPQRAIQQA 317
Query: 999 ESMIMQKVASASER 1040
E+MI QKV SA+ER
Sbjct: 318 ETMIKQKVDSATER 331
>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| hypothetical protein
POPTR_0010s23710g [Populus trichocarpa]
Length = 334
Score = 400 bits (1029), Expect = e-109
Identities = 207/315 (65%), Positives = 244/315 (77%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P S SD +EK Y RFLVSNAAAGSVIGKGG+TIT+FQSQSGARIQLSRN EFF
Sbjct: 18 RSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFF 77
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGTSDRIIM+SG +++KA EL+++KLLSEI EDGD+ + R +VRL+VPNS+C
Sbjct: 78 PGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIG 137
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
+ IKSFIE+S AGIKISP D + GL DRLVT+TG+LEEQM AI LILSKL +D HY
Sbjct: 138 KGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHY 197
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
SQ+M PFSYAGV SGF G Y ++P V AYN++N+GPNG+ + Q NKDD +NS+
Sbjct: 198 SQTMHAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPNGAAVKFQHNKDDITNSV 257
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVADEHI +IMEISQ SGAR+KISDRGDFMSGT+DRK+TITGSQ AIRAA
Sbjct: 258 TIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAA 317
Query: 999 ESMIMQKVASASERE 1043
E MIMQKV+ ASERE
Sbjct: 318 EDMIMQKVSYASERE 332
>ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| TOMV RNA binding protein
[Arabidopsis thaliana]
Length = 334
Score = 399 bits (1024), Expect = e-108
Identities = 201/314 (64%), Positives = 249/314 (79%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P + SS +D EK +IRFLVSNAAAGSVIGKGGSTITEFQ++SGARIQLSRNQEFF
Sbjct: 18 RSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 77
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGT+DRIIMISG E++ EL+L KL SE+H EDG++V+ R ++RL+VPNSSC
Sbjct: 78 PGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIG 137
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
ATIKSFIE+S+AGIKISP D+ + GL+DRLVTL+G+ EEQMRAI LIL+KL ED HY
Sbjct: 138 KGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHY 197
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
SQ++ P+SYAG+ SGF G PY Y +PSV YN++NY PNGSGG+ Q++K++ S ++
Sbjct: 198 SQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKEEASTTV 257
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVADEHI +IMEI+Q++GARIKISDRGDFMSGT+DRKV+ITG Q AI+ A
Sbjct: 258 TIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQA 317
Query: 999 ESMIMQKVASASER 1040
E+MI QKV SA+ER
Sbjct: 318 ETMIKQKVDSATER 331
>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding
protein, putative [Ricinus communis]
Length = 314
Score = 397 bits (1021), Expect = e-108
Identities = 211/314 (67%), Positives = 242/314 (77%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P KS SD EK Y+RFLVSNAAAGSVIGKGG+TIT+FQSQSGARIQLSRN EFF
Sbjct: 19 RSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFF 78
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGTSDRII+ISG +++K ELVL+KLLSE+H EDGDDVD R+KVRL+VPNSSC
Sbjct: 79 PGTSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIG 138
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
+ IKSFIE+SQAGIKISPQD+N+ GLNDRLVT+TG+LEEQMRAI LILSKL +D HY
Sbjct: 139 KGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHY 198
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
Q+M PFSY AVAYN++NYG NG+GG+ Q+NK+DR+NS+
Sbjct: 199 VQTMHAPFSY---------------------AVAYNSMNYGANGAGGKFQNNKEDRTNSV 237
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVAD HI +IMEISQVSGARIKISDRGDFMSGT+DRK+ ITGSQ AIR A
Sbjct: 238 TIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTA 297
Query: 999 ESMIMQKVASASER 1040
E MIMQKVA ASER
Sbjct: 298 EGMIMQKVAYASER 311
>ref|XP_006843101.1| hypothetical protein AMTR_s00140p00057330 [Amborella trichopoda]
gi|548845311|gb|ERN04776.1| hypothetical protein
AMTR_s00140p00057330 [Amborella trichopoda]
Length = 355
Score = 395 bits (1016), Expect = e-107
Identities = 210/334 (62%), Positives = 245/334 (73%), Gaps = 20/334 (5%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
KR ++ D+KEK A +RFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRN E+F
Sbjct: 22 KRSTNPNPTSPDNKEKPASVRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEYF 81
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGT+DRIIMISG EI+ A + +LSKL SE+H EDGDDVD R K+RLIVPNS C
Sbjct: 82 PGTTDRIIMISGTVDEILTAMDFILSKLQSELHNEDGDDVDPRLKLRLIVPNSGCGGIIG 141
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
+TIKSFIE+S AGIKISPQDH Y+G++DRLVT+TGSLEEQ++A+ LI+SKL+ED HY
Sbjct: 142 KAGSTIKSFIENSHAGIKISPQDHGYVGMSDRLVTITGSLEEQLQAVSLIISKLIEDPHY 201
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNK------- 797
SQ + P SY GVN SG G P GY++P VG VAYN INYG NG GG+ ++NK
Sbjct: 202 SQWANSPLSYTGVNFSGLHGVPVGYVLPPVGPVAYNLINYGSNGVGGKYKNNKGLIPPVM 261
Query: 798 -------------DDRSNSMTIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFM 938
+ NS+T+GV DEHI S+MEI QVSGARIKISDRGDF+
Sbjct: 262 ALRQSSGPQDGPSNSVPNSITLGVGDEHIGAVVGRGGRSVMEIMQVSGARIKISDRGDFI 321
Query: 939 SGTSDRKVTITGSQAAIRAAESMIMQKVASASER 1040
SGTSDRKVTITGS AI AE+MI Q+VAS SER
Sbjct: 322 SGTSDRKVTITGSSEAIHTAEAMIQQRVASVSER 355
>ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
gi|508726981|gb|EOY18878.1| Binding to TOMV RNA 1L (long
form) isoform 6 [Theobroma cacao]
Length = 314
Score = 394 bits (1012), Expect = e-107
Identities = 212/314 (67%), Positives = 244/314 (77%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P KS S+ EK YIRFLVSNAAAGSVIGKGGSTITEFQS+SGARIQLSRN EFF
Sbjct: 18 RSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFF 77
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGTSDRIIMISG E++KA EL+L+KLL+E+++ED DDV+ R+KVRLIVPNSSC
Sbjct: 78 PGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIG 137
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
ATIKSFIEDSQAGIKISPQD+N+ GLNDRLVTLTG+L+EQMRAI LILSKL ED HY
Sbjct: 138 KGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHY 197
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
Q+M PFSYA A YN+++Y NG+GG+ Q++K+DRSNS+
Sbjct: 198 LQAMHAPFSYA--------------------AATYNSMSYPSNGAGGKFQNHKEDRSNSV 237
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVAD HI +IMEISQ+SGARIKISDRGDFMSGT+DRKVTITGSQ AIR A
Sbjct: 238 TIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQA 297
Query: 999 ESMIMQKVASASER 1040
ESMIMQKVA A++R
Sbjct: 298 ESMIMQKVAYATDR 311
>ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
gi|590565855|ref|XP_007010065.1| Binding to TOMV RNA 1L
(long form) isoform 1 [Theobroma cacao]
gi|590565859|ref|XP_007010066.1| Binding to TOMV RNA 1L
(long form) isoform 1 [Theobroma cacao]
gi|508726976|gb|EOY18873.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
Length = 313
Score = 392 bits (1007), Expect = e-106
Identities = 211/314 (67%), Positives = 243/314 (77%)
Frame = +3
Query: 99 KRPGANKSSASDDKEKAAYIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNQEFF 278
+ P KS S+ EK YIRFLVSNAAAGSVIGKGGSTITEFQS+SGARIQLSRN EFF
Sbjct: 18 RSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFF 77
Query: 279 PGTSDRIIMISGEFAEIIKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 458
PGTSDRIIMISG E++KA EL+L+KLL+E+++ED DDV+ R+KVRLIVPNSSC
Sbjct: 78 PGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIG 137
Query: 459 XXXATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 638
ATIKSFIEDSQAGIKISPQD+N+ GLNDRLVTLTG+L+EQMRAI LILSKL ED HY
Sbjct: 138 KGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHY 197
Query: 639 SQSMSGPFSYAGVNMSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRSQSNKDDRSNSM 818
Q+M PFSY A YN+++Y NG+GG+ Q++K+DRSNS+
Sbjct: 198 LQAMHAPFSY---------------------AATYNSMSYPSNGAGGKFQNHKEDRSNSV 236
Query: 819 TIGVADEHIXXXXXXXXXSIMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 998
TIGVAD HI +IMEISQ+SGARIKISDRGDFMSGT+DRKVTITGSQ AIR A
Sbjct: 237 TIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQA 296
Query: 999 ESMIMQKVASASER 1040
ESMIMQKVA A++R
Sbjct: 297 ESMIMQKVAYATDR 310