BLASTX nr result
ID: Sinomenium21_contig00008784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00008784
(718 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFC89654.1| RBP42 [Elaeis guineensis] 91 5e-16
ref|XP_006358946.1| PREDICTED: heterogeneous nuclear ribonucleop... 71 3e-10
ref|XP_004251889.1| PREDICTED: heterogeneous nuclear ribonucleop... 71 3e-10
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248... 71 3e-10
gb|EYU26340.1| hypothetical protein MIMGU_mgv1a024658mg [Mimulus... 70 9e-10
gb|EPS74427.1| hypothetical protein M569_00327 [Genlisea aurea] 70 9e-10
ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [A... 69 1e-09
gb|EXC18502.1| Uncharacterized RNA-binding protein [Morus notabi... 68 4e-09
ref|XP_006644366.1| PREDICTED: glycine-rich cell wall structural... 68 4e-09
ref|XP_004969158.1| PREDICTED: heterogeneous nuclear ribonucleop... 68 4e-09
ref|XP_007021676.1| RNA-binding family protein [Theobroma cacao]... 68 4e-09
ref|NP_001043567.1| Os01g0614500 [Oryza sativa Japonica Group] g... 68 4e-09
gb|EAY74957.1| hypothetical protein OsI_02853 [Oryza sativa Indi... 68 4e-09
tpg|DAA58966.1| TPA: heterogeneous nuclear ribonucleoprotein A3-... 67 5e-09
ref|NP_001150933.1| heterogeneous nuclear ribonucleoprotein A3-l... 67 5e-09
ref|NP_001168409.1| hypothetical protein [Zea mays] gi|223948081... 67 6e-09
ref|XP_003569353.1| PREDICTED: uncharacterized protein LOC100825... 67 8e-09
ref|XP_002458152.1| hypothetical protein SORBIDRAFT_03g027820 [S... 67 8e-09
ref|XP_004293936.1| PREDICTED: heterogeneous nuclear ribonucleop... 66 1e-08
ref|XP_004505137.1| PREDICTED: heterogeneous nuclear ribonucleop... 65 2e-08
>gb|AFC89654.1| RBP42 [Elaeis guineensis]
Length = 413
Score = 90.5 bits (223), Expect = 5e-16
Identities = 71/217 (32%), Positives = 78/217 (35%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAIDXXXXXXXXXXVGTQVPTX 182
QTGK RGFALFVYKTAE A A+LVD TK IDGH + CKLAID G P
Sbjct: 197 QTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAIDGKKVKPGAPAAGAAAPVG 256
Query: 183 XXXXXXXXXXXXXXXXXASQXXXXXXXXXXXXXXXXXXXXTGMAHQNPNQLNSPLQSSIG 362
Q+ + P G
Sbjct: 257 GVQGQRMGGGADIGGDGLGMGHQSSLPGSFGGYSGGGIPGAAGLGQH----HHPSSIGAG 312
Query: 363 MPSGLSTVGGQVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLPPGS 542
P GLS+VG QVP R+PP S
Sbjct: 313 TP-GLSSVGSQVPGAGGYGGGLGGPYGASSQYDGPGYGGFGGGSSLY-------RMPPSS 364
Query: 543 VGMPSGGYPESGHYGLXXXXXXXXXXXXXGTSPVPRV 653
VGMPSGGYPESGHY L G+SP RV
Sbjct: 365 VGMPSGGYPESGHYPLSSSAYQSQHRPPTGSSPGARV 401
>ref|XP_006358946.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Solanum tuberosum]
Length = 446
Score = 71.2 bits (173), Expect = 3e-10
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAIDXXXXXXXXXXVGTQVPT 179
TGKS+G+ALFVYKTAEAA+++LVD K IDGHQ+ CKLAID G QV T
Sbjct: 204 TGKSKGYALFVYKTAEAAQSSLVDPVKNIDGHQLNCKLAIDGKKKPGVGGPGGAQVQT 261
>ref|XP_004251889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Solanum
lycopersicum]
Length = 440
Score = 71.2 bits (173), Expect = 3e-10
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAIDXXXXXXXXXXVGTQVPT 179
TGKS+G+ALFVYKTAEAA+++LVD K IDGHQ+ CKLAID G QV T
Sbjct: 204 TGKSKGYALFVYKTAEAAQSSLVDPVKNIDGHQLNCKLAIDGKKKPGVGGPGGAQVQT 261
>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein
VITISV_017556 [Vitis vinifera]
Length = 449
Score = 71.2 bits (173), Expect = 3e-10
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGKSRGFALFVYKTAEAA+AALVD TK IDG Q+ CKLAI+
Sbjct: 201 QTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLAIE 242
>gb|EYU26340.1| hypothetical protein MIMGU_mgv1a024658mg [Mimulus guttatus]
Length = 387
Score = 69.7 bits (169), Expect = 9e-10
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
TGKS+GFALFVYKTAEAARA+LVD K +DGHQ+ CKLA D
Sbjct: 226 TGKSKGFALFVYKTAEAARASLVDPVKNLDGHQLNCKLASD 266
>gb|EPS74427.1| hypothetical protein M569_00327 [Genlisea aurea]
Length = 414
Score = 69.7 bits (169), Expect = 9e-10
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
TGKS+GFALFVYKT EAARA+LVD K +DGHQ+ CKLA+D
Sbjct: 220 TGKSKGFALFVYKTVEAARASLVDPIKKVDGHQLSCKLAVD 260
>ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [Amborella trichopoda]
gi|548856064|gb|ERN13920.1| hypothetical protein
AMTR_s00021p00110500 [Amborella trichopoda]
Length = 409
Score = 69.3 bits (168), Expect = 1e-09
Identities = 69/228 (30%), Positives = 83/228 (36%), Gaps = 11/228 (4%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAIDXXXXXXXXXXVGTQVPTX 182
QTGKSRGFALFVYKT EAA+AAL + K++DGHQ+ CKLA+D G + P
Sbjct: 189 QTGKSRGFALFVYKTVEAAKAALEEPNKSVDGHQLVCKLAVD---GKKGRPLAGQENPV- 244
Query: 183 XXXXXXXXXXXXXXXXXASQXXXXXXXXXXXXXXXXXXXXTGMAHQN-PNQLNSPLQSSI 359
GMA + + LNSPLQSS+
Sbjct: 245 ------------PEPTGLGGLSGPPTNPPPYGLGHSGYTQPGMAGPSLGHHLNSPLQSSV 292
Query: 360 GMPSGLSTVGGQVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLPPG 539
P GLS++ G V G
Sbjct: 293 ATP-GLSSLRGGVSGPMPSTLGVGGGAYGAGHHTSGLGAYGSSQAYGHGAGVGYGGSGGG 351
Query: 540 SV-GMPS-----GGYPESGHYG----LXXXXXXXXXXXXXGTSPVPRV 653
S+ G+P G YPE GHYG G SPVPRV
Sbjct: 352 SMYGLPPSSQGVGSYPEPGHYGALSSTTSYQSQHHHHPPSGASPVPRV 399
>gb|EXC18502.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 416
Score = 67.8 bits (164), Expect = 4e-09
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RG+ALFVYKT E ARAALVD KTI+G Q+ CKLAID
Sbjct: 207 QTGKCRGYALFVYKTPEGARAALVDPVKTIEGRQLSCKLAID 248
>ref|XP_006644366.1| PREDICTED: glycine-rich cell wall structural protein-like, partial
[Oryza brachyantha]
Length = 279
Score = 67.8 bits (164), Expect = 4e-09
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVDS K IDGHQ+ CKLAI+
Sbjct: 47 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIE 88
>ref|XP_004969158.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
X1 [Setaria italica] gi|514778678|ref|XP_004969159.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
A1-like isoform X2 [Setaria italica]
Length = 450
Score = 67.8 bits (164), Expect = 4e-09
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVDS K IDGHQ+ CKLAI+
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIE 253
>ref|XP_007021676.1| RNA-binding family protein [Theobroma cacao]
gi|508721304|gb|EOY13201.1| RNA-binding family protein
[Theobroma cacao]
Length = 429
Score = 67.8 bits (164), Expect = 4e-09
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGKSRGFALFVYKTA+ A+AALV+ K IDG QM CKLAI+
Sbjct: 204 QTGKSRGFALFVYKTADGAQAALVEPVKNIDGRQMNCKLAIE 245
>ref|NP_001043567.1| Os01g0614500 [Oryza sativa Japonica Group]
gi|54290288|dbj|BAD61233.1| heterogeneous nuclear
ribonucleoprotein A2/B1-like [Oryza sativa Japonica
Group] gi|113533098|dbj|BAF05481.1| Os01g0614500 [Oryza
sativa Japonica Group]
Length = 447
Score = 67.8 bits (164), Expect = 4e-09
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVDS K IDGHQ+ CKLAI+
Sbjct: 213 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIE 254
>gb|EAY74957.1| hypothetical protein OsI_02853 [Oryza sativa Indica Group]
Length = 260
Score = 67.8 bits (164), Expect = 4e-09
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVDS K IDGHQ+ CKLAI+
Sbjct: 26 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIE 67
>tpg|DAA58966.1| TPA: heterogeneous nuclear ribonucleoprotein A3-like protein 2
isoform 1 [Zea mays] gi|414881836|tpg|DAA58967.1| TPA:
heterogeneous nuclear ribonucleoprotein A3-like protein
2 isoform 2 [Zea mays]
Length = 447
Score = 67.4 bits (163), Expect = 5e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD+ K IDGHQ+ CKLA+D
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLALD 253
>ref|NP_001150933.1| heterogeneous nuclear ribonucleoprotein A3-like protein 2 [Zea
mays] gi|195643046|gb|ACG40991.1| heterogeneous nuclear
ribonucleoprotein A3-like protein 2 [Zea mays]
Length = 447
Score = 67.4 bits (163), Expect = 5e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD+ K IDGHQ+ CKLA+D
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLALD 253
>ref|NP_001168409.1| hypothetical protein [Zea mays] gi|223948081|gb|ACN28124.1| unknown
[Zea mays] gi|413950595|gb|AFW83244.1| hypothetical
protein ZEAMMB73_012333 [Zea mays]
Length = 448
Score = 67.0 bits (162), Expect = 6e-09
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVDS K ID HQ+ CKLAID
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDSHQLVCKLAID 253
>ref|XP_003569353.1| PREDICTED: uncharacterized protein LOC100825606 [Brachypodium
distachyon]
Length = 448
Score = 66.6 bits (161), Expect = 8e-09
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT + A+A+LVDS KTI+GHQ+ CKLAI+
Sbjct: 212 QTGKFRGFALFVYKTPDGAQASLVDSIKTIEGHQLVCKLAIE 253
>ref|XP_002458152.1| hypothetical protein SORBIDRAFT_03g027820 [Sorghum bicolor]
gi|241930127|gb|EES03272.1| hypothetical protein
SORBIDRAFT_03g027820 [Sorghum bicolor]
Length = 445
Score = 66.6 bits (161), Expect = 8e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD+ K IDGHQ+ CKLAI+
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLAIE 253
>ref|XP_004293936.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
[Fragaria vesca subsp. vesca]
Length = 353
Score = 65.9 bits (159), Expect = 1e-08
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAIDXXXXXXXXXXVGTQVP 176
TGKS+GFA FVYKT E ARAAL + K IDGHQ+ CKLA+D GTQVP
Sbjct: 206 TGKSKGFAFFVYKTEEGARAALAEPMKNIDGHQVTCKLAVDNKKSKHGG---GTQVP 259
>ref|XP_004505137.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cicer
arietinum]
Length = 365
Score = 65.5 bits (158), Expect = 2e-08
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDSTKTIDGHQMGCKLAID 128
+GK+RGFA FVYKT E ARA+LV+S KT+DGHQ+ CKLA+D
Sbjct: 204 SGKTRGFAFFVYKTEEGARASLVESLKTVDGHQVICKLAVD 244