BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00008669
         (544 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   246   3e-63
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]   246   3e-63
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]           244   1e-62
ref|XP_007017900.1| Pseudouridine synthase family protein isofor...   242   4e-62
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   240   1e-61
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...   237   1e-60
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   236   3e-60
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...   236   3e-60
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...   236   3e-60
ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A...   235   6e-60
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr...   233   2e-59
gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus...   230   2e-58
gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus...   230   2e-58
ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phas...   229   3e-58
ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phas...   229   3e-58
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   228   1e-57
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...   226   3e-57
ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Caps...   226   4e-57
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl...   224   1e-56
ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatul...   223   2e-56

>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  246 bits (628), Expect = 3e-63
 Identities = 120/181 (66%), Positives = 139/181 (76%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA+GTLVNG+LHHC+ PT+A P+ +                  N    GQ N 
Sbjct: 162 VVHPAPGNASGTLVNGILHHCSLPTVALPNRD-------SEEDDISDDEFNSFAAGQ-NC 213

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
             C  +IRPGIVHRLDKGTSGLLVVAKDEHSH HLSEQFK H++HRVYISL+SGVP+P+S
Sbjct: 214 GTCETNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLS 273

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR++IP+GRD NNRIRM A+PG +N    RHAASRYKVIE+L  GG+ALVEWRLETGRTH
Sbjct: 274 GRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTH 333

Query: 542 Q 544
           Q
Sbjct: 334 Q 334


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score =  246 bits (628), Expect = 3e-63
 Identities = 120/181 (66%), Positives = 139/181 (76%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA+GTLVNG+LHHC+ PT+A P+ +                  N    GQ N 
Sbjct: 308 VVHPAPGNASGTLVNGILHHCSLPTVALPNRD-------SEEDDILDDEFNSFAAGQ-NC 359

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
             C  +IRPGIVHRLDKGTSGLLVVAKDEHSH HLSEQFK H++HRVYISL+SGVP+P+S
Sbjct: 360 GTCETNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLS 419

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR++IP+GRD NNRIRM A+PG +N    RHAASRYKVIE+L  GG+ALVEWRLETGRTH
Sbjct: 420 GRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTH 479

Query: 542 Q 544
           Q
Sbjct: 480 Q 480


>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
          Length = 369

 Score =  244 bits (623), Expect = 1e-62
 Identities = 122/181 (67%), Positives = 135/181 (74%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA GTLVNG+LHHC+ PTIAF   E L                + S  G    
Sbjct: 176 VVHPAPGNAKGTLVNGILHHCSLPTIAFSHQESLSDDEDTCDDEFRGMSMDASISGA--- 232

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
                S+RPGIVHRLDKGTSGLLVVAKDEHSH HLSEQFK HT+HRVY+SL+SGVPS +S
Sbjct: 233 -----SVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIHRVYVSLTSGVPSQLS 287

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           G I++PIGRD NNRIRMAAIPG  N +  RHAASRYKVIE+L  GG+ALVEWRLETGRTH
Sbjct: 288 GHIEVPIGRDPNNRIRMAAIPGATNSKRARHAASRYKVIEILAAGGSALVEWRLETGRTH 347

Query: 542 Q 544
           Q
Sbjct: 348 Q 348


>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508723228|gb|EOY15125.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  242 bits (618), Expect = 4e-62
 Identities = 119/181 (65%), Positives = 136/181 (75%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA GTLVNG+LHHC+ PT+A  + EVL                +    G    
Sbjct: 165 VVHPAPGNATGTLVNGILHHCSLPTVALSEKEVLSDTED----------VSDDDEGFCYG 214

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           +    S+RPGIVHRLDKGTSGLLVVAKDEHSH HLSEQFKQHT+ RVYISL+ GVPSP +
Sbjct: 215 ASAAASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSA 274

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR+DI IGRD NNR+RM A+PGLN+    RHAASRYKVIEVL GGG+AL++WRLETGRTH
Sbjct: 275 GRVDISIGRDSNNRVRMIAVPGLNHHGRARHAASRYKVIEVLAGGGSALIQWRLETGRTH 334

Query: 542 Q 544
           Q
Sbjct: 335 Q 335


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  240 bits (613), Expect = 1e-61
 Identities = 121/181 (66%), Positives = 132/181 (72%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGN  GTLVNG+LHHC  PT+A    EVL                         S
Sbjct: 157 VVHPAPGNPTGTLVNGILHHCNLPTVAISSQEVLSDAEDRSDDDERSY-----------S 205

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           S C  SIRPGIVHRLDKGTSGLLVVAKDEH+H HLSEQFKQHT+ RVYISL+SGVPS ++
Sbjct: 206 SSCESSIRPGIVHRLDKGTSGLLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVPSALT 265

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GRIDIPIGRD+NNRIRM AIPG       RHAASR+KV+E L GGG+ALVEWRLETGRTH
Sbjct: 266 GRIDIPIGRDVNNRIRMTAIPGPIKQGRARHAASRFKVVETLAGGGSALVEWRLETGRTH 325

Query: 542 Q 544
           Q
Sbjct: 326 Q 326


>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 436

 Score =  237 bits (605), Expect = 1e-60
 Identities = 116/181 (64%), Positives = 136/181 (75%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA GTLV+G+LHHC+ PT++FP  EVL                N+SP    +S
Sbjct: 156 VVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSS 215

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
             C  S+RPGIVHRLDKGTSGLLVVAK+EHS   L+EQFK+HT+ RVY+S++ GVP+ ++
Sbjct: 216 VMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVA 275

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR+DIPIGRD NNRIRMAAIPG       RHA SRYKVIE L GGG+ALVEWRLETGRTH
Sbjct: 276 GRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTH 335

Query: 542 Q 544
           Q
Sbjct: 336 Q 336


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score =  236 bits (602), Expect = 3e-60
 Identities = 122/181 (67%), Positives = 134/181 (74%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA GTLVNG+LHHC+ PT+A  + E                    S   + +S
Sbjct: 156 VVHPAPGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDI------------SDDEEFSS 203

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           S    SIRPGIVHRLDKGTSGLLVVAKDEHSH HLSEQFK HT+ RVYISL+SGVPS  S
Sbjct: 204 SISGASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSS 263

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GRI++PI RD NNRIRMAAIPG N     RHAASRYKVIE+L GGG+ALVEWRLETGRTH
Sbjct: 264 GRIEVPISRDPNNRIRMAAIPGSNKHGQARHAASRYKVIEILAGGGSALVEWRLETGRTH 323

Query: 542 Q 544
           Q
Sbjct: 324 Q 324


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537377|gb|ESR48495.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score =  236 bits (602), Expect = 3e-60
 Identities = 122/181 (67%), Positives = 134/181 (74%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA GTLVNG+LHHC+ PT+A  + E                    S   + +S
Sbjct: 156 VVHPAPGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDI------------SDDEEFSS 203

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           S    SIRPGIVHRLDKGTSGLLVVAKDEHSH HLSEQFK HT+ RVYISL+SGVPS  S
Sbjct: 204 SISGASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSS 263

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GRI++PI RD NNRIRMAAIPG N     RHAASRYKVIE+L GGG+ALVEWRLETGRTH
Sbjct: 264 GRIEVPISRDPNNRIRMAAIPGSNKHGQARHAASRYKVIEILAGGGSALVEWRLETGRTH 323

Query: 542 Q 544
           Q
Sbjct: 324 Q 324


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537376|gb|ESR48494.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score =  236 bits (602), Expect = 3e-60
 Identities = 122/181 (67%), Positives = 134/181 (74%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA GTLVNG+LHHC+ PT+A  + E                    S   + +S
Sbjct: 156 VVHPAPGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDI------------SDDEEFSS 203

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           S    SIRPGIVHRLDKGTSGLLVVAKDEHSH HLSEQFK HT+ RVYISL+SGVPS  S
Sbjct: 204 SISGASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSS 263

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GRI++PI RD NNRIRMAAIPG N     RHAASRYKVIE+L GGG+ALVEWRLETGRTH
Sbjct: 264 GRIEVPISRDPNNRIRMAAIPGSNKHGQARHAASRYKVIEILAGGGSALVEWRLETGRTH 323

Query: 542 Q 544
           Q
Sbjct: 324 Q 324


>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
           gi|548833830|gb|ERM96267.1| hypothetical protein
           AMTR_s00001p00157430 [Amborella trichopoda]
          Length = 452

 Score =  235 bits (599), Expect = 6e-60
 Identities = 119/181 (65%), Positives = 132/181 (72%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNANGTLVNG+LHHCT P    PD E+                 N  P     S
Sbjct: 168 VVHPAPGNANGTLVNGILHHCTLPAFGLPDGELTSESDDECDNGLTMF--NPDPI----S 221

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           + C  SIRPGIVHRLDKGTSGLLVVAK+EHSH HLSEQFK HT+HR YISL+ GVPSP +
Sbjct: 222 TQCRSSIRPGIVHRLDKGTSGLLVVAKNEHSHAHLSEQFKLHTIHRQYISLTCGVPSPSN 281

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           G I+IPI RD+NNRIRMAA+ G NN R  R A SRY V+EVL GGG+ALVEWRL+TGRTH
Sbjct: 282 GCIEIPIARDMNNRIRMAAVSGQNNTRKARLATSRYHVMEVLAGGGSALVEWRLQTGRTH 341

Query: 542 Q 544
           Q
Sbjct: 342 Q 342


>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
           gi|557086678|gb|ESQ27530.1| hypothetical protein
           EUTSA_v10018588mg [Eutrema salsugineum]
          Length = 432

 Score =  233 bits (594), Expect = 2e-59
 Identities = 119/181 (65%), Positives = 132/181 (72%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGN  GTLVNG+LHHC+ P +A+ + E                 T        +S
Sbjct: 168 VVHPAPGNPTGTLVNGILHHCSLPCVAYSNPE-----------DDSDEETLSDDEEMTSS 216

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           S    S+RPGIVHRLDKGTSGLLVVAKDEHSH HL+EQFK HT+ RVYISL+SGVPSP  
Sbjct: 217 SSLAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKLHTIERVYISLTSGVPSPSQ 276

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR+DIPIGRD NNRIRMAAIPG  +    RHAASRYKVIE L GGG+ALVEWRLETGRTH
Sbjct: 277 GRVDIPIGRDPNNRIRMAAIPGSLSRGKARHAASRYKVIETLAGGGSALVEWRLETGRTH 336

Query: 542 Q 544
           Q
Sbjct: 337 Q 337


>gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
          Length = 422

 Score =  230 bits (586), Expect = 2e-58
 Identities = 117/184 (63%), Positives = 131/184 (71%), Gaps = 3/184 (1%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNANGTLVNG+LHHC   T+ F    +               P N      I+ 
Sbjct: 160 VVHPAPGNANGTLVNGILHHCRLSTVCFNPESL---------------PDNIDDDDSIDE 204

Query: 182 SGC---TDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPS 352
           +       S+RPGIVHRLDKGTSGLLVVAKDEHSH HL+EQFK+HTV RVY+SL+ GVPS
Sbjct: 205 ATVFPSESSVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPS 264

Query: 353 PISGRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETG 532
           P+SGR+DIPIGRD NNRIRM AIPG       RHA SRYKV+E+L GGG ALVEWRLETG
Sbjct: 265 PVSGRVDIPIGRDSNNRIRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETG 324

Query: 533 RTHQ 544
           RTHQ
Sbjct: 325 RTHQ 328


>gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
          Length = 432

 Score =  230 bits (586), Expect = 2e-58
 Identities = 117/184 (63%), Positives = 131/184 (71%), Gaps = 3/184 (1%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNANGTLVNG+LHHC   T+ F    +               P N      I+ 
Sbjct: 160 VVHPAPGNANGTLVNGILHHCRLSTVCFNPESL---------------PDNIDDDDSIDE 204

Query: 182 SGC---TDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPS 352
           +       S+RPGIVHRLDKGTSGLLVVAKDEHSH HL+EQFK+HTV RVY+SL+ GVPS
Sbjct: 205 ATVFPSESSVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPS 264

Query: 353 PISGRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETG 532
           P+SGR+DIPIGRD NNRIRM AIPG       RHA SRYKV+E+L GGG ALVEWRLETG
Sbjct: 265 PVSGRVDIPIGRDSNNRIRMVAIPGSALHGKARHAVSRYKVVEILAGGGCALVEWRLETG 324

Query: 533 RTHQ 544
           RTHQ
Sbjct: 325 RTHQ 328


>ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
           gi|561009207|gb|ESW08114.1| hypothetical protein
           PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 447

 Score =  229 bits (584), Expect = 3e-58
 Identities = 114/181 (62%), Positives = 130/181 (71%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGN +GTLVNG+LHHC  P + F   E L                  S C   +S
Sbjct: 166 VVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEGLSDTEDCDDEVNSYGSLASS-CEGSHS 224

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
                SIRPGIVHRLDKGTSGLLVVAKDEHSH  LSEQFKQ T+ RVY+SL++GVP PIS
Sbjct: 225 RPSMSSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTIKRVYVSLTAGVPRPIS 284

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR+D+P+GRDLNNR+RM A+ G  N R  RHAASRYKVIE+L GG  +LVEW+LETGRTH
Sbjct: 285 GRVDVPVGRDLNNRLRMTAVAGPVNSRKARHAASRYKVIEILAGGSCSLVEWKLETGRTH 344

Query: 542 Q 544
           Q
Sbjct: 345 Q 345


>ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
           gi|561009206|gb|ESW08113.1| hypothetical protein
           PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 458

 Score =  229 bits (584), Expect = 3e-58
 Identities = 114/181 (62%), Positives = 130/181 (71%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGN +GTLVNG+LHHC  P + F   E L                  S C   +S
Sbjct: 177 VVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEGLSDTEDCDDEVNSYGSLASS-CEGSHS 235

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
                SIRPGIVHRLDKGTSGLLVVAKDEHSH  LSEQFKQ T+ RVY+SL++GVP PIS
Sbjct: 236 RPSMSSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTIKRVYVSLTAGVPRPIS 295

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR+D+P+GRDLNNR+RM A+ G  N R  RHAASRYKVIE+L GG  +LVEW+LETGRTH
Sbjct: 296 GRVDVPVGRDLNNRLRMTAVAGPVNSRKARHAASRYKVIEILAGGSCSLVEWKLETGRTH 355

Query: 542 Q 544
           Q
Sbjct: 356 Q 356


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Solanum tuberosum]
          Length = 431

 Score =  228 bits (580), Expect = 1e-57
 Identities = 114/181 (62%), Positives = 134/181 (74%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA GTLV+G+LHHC+ PTI+F   EVL                N+SP    +S
Sbjct: 156 VVHPAPGNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSS 215

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
             C  S+RPGIVHRLDKGTSGLLVVAK+E+S   L+EQFK+HT+ RVY+S++ GVP+ ++
Sbjct: 216 VMCESSVRPGIVHRLDKGTSGLLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVA 275

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR+DIPIGRD NNRIRMAAIPG       RHA SRYKVIE L  GG+ALVEWRLETGRTH
Sbjct: 276 GRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKLARGGSALVEWRLETGRTH 335

Query: 542 Q 544
           Q
Sbjct: 336 Q 336


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
           gi|222843675|gb|EEE81222.1| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 444

 Score =  226 bits (576), Expect = 3e-57
 Identities = 118/181 (65%), Positives = 136/181 (75%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGNA GTLVNG+LHHC+ PT++    EVL                ++  C    S
Sbjct: 179 VVHPAPGNATGTLVNGILHHCSLPTVS--SQEVLSGAEDVSDDD------DEGLC----S 226

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           S    S+RPGIVHRLDKGTSGLLVVAKDEHSH HLSEQFK HT+ RVY+SL+ GVP+P++
Sbjct: 227 SSYAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMA 286

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GRID+PIGRD++NRIRMAAI   N     RHAASRYKVIE+L GGG+ALVEWRLETGRTH
Sbjct: 287 GRIDVPIGRDVSNRIRMAAIVEPNR-GQARHAASRYKVIEILAGGGSALVEWRLETGRTH 345

Query: 542 Q 544
           Q
Sbjct: 346 Q 346


>ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Capsella rubella]
           gi|482570987|gb|EOA35175.1| hypothetical protein
           CARUB_v10020321mg [Capsella rubella]
          Length = 432

 Score =  226 bits (575), Expect = 4e-57
 Identities = 114/181 (62%), Positives = 132/181 (72%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGN  GTLVNG+LHHC+ P++A+   E                 +        +S
Sbjct: 167 VVHPAPGNPTGTLVNGILHHCSLPSVAYSSPE----------DDDSDDESFSDGEEMTSS 216

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
           S    S+RPGIVHRLDKGT+GLLVVAKDEHSH HL+EQFK HT+ RVY+SL++GVPSP  
Sbjct: 217 SSYAASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQ 276

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GRI+IPIGRD +NRIRMAAIPG  +    RHAASRYKVIE L GGG+ALVEWRLETGRTH
Sbjct: 277 GRIEIPIGRDSSNRIRMAAIPGGLSSGRARHAASRYKVIETLAGGGSALVEWRLETGRTH 336

Query: 542 Q 544
           Q
Sbjct: 337 Q 337


>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
           X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
           PREDICTED: RNA pseudouridine synthase 2,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 450

 Score =  224 bits (571), Expect = 1e-56
 Identities = 110/183 (60%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGN +GTLVNG+LHHC  P + F  +E L                  S C  +NS
Sbjct: 167 VVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDEFNSYISLASS-CEGLNS 225

Query: 182 --SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSP 355
             S  ++SIRPGIVHRLDKGTSGLLVVAKDEHSH  LSEQFKQ T+ R+Y+SL++GVP+P
Sbjct: 226 RLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTIKRLYVSLTAGVPTP 285

Query: 356 ISGRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGR 535
           ++GR+++P+GRD NNRIRM A+ G  N +  R+AASRYKVIE+L GG  +LVEW+LETGR
Sbjct: 286 VAGRVEVPVGRDTNNRIRMTAVTGPVNSKKARYAASRYKVIEILAGGSCSLVEWKLETGR 345

Query: 536 THQ 544
           THQ
Sbjct: 346 THQ 348


>ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355492867|gb|AES74070.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 465

 Score =  223 bits (568), Expect = 2e-56
 Identities = 110/181 (60%), Positives = 131/181 (72%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGVLHHCTFPTIAFPDNEVLXXXXXXXXXXXXXXPTNQSPCGQINS 181
           VVHPAPGN +GTLVNG+LHHC  P + F   E L                + S  G ++S
Sbjct: 180 VVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEALSDTEDSDDELNGFSSQSSSSVG-LDS 238

Query: 182 SGCTDSIRPGIVHRLDKGTSGLLVVAKDEHSHGHLSEQFKQHTVHRVYISLSSGVPSPIS 361
                SIRPGIVHRLDKGTSGLLVVAK+EHSH  LSEQFK  T+ RVY+SL++GVP+P+S
Sbjct: 239 RLSMASIRPGIVHRLDKGTSGLLVVAKNEHSHMKLSEQFKLRTIKRVYVSLTAGVPTPVS 298

Query: 362 GRIDIPIGRDLNNRIRMAAIPGLNNCRHVRHAASRYKVIEVLGGGGAALVEWRLETGRTH 541
           GR+++P+GRD NNR+RM A+ GL N    RHAASRYKVIE+L GG  ALVEW+LETGRTH
Sbjct: 299 GRVEVPVGRDPNNRLRMIAVAGLVNSVKARHAASRYKVIEILAGGSCALVEWKLETGRTH 358

Query: 542 Q 544
           Q
Sbjct: 359 Q 359