BLASTX nr result
ID: Sinomenium21_contig00008444
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00008444
(1461 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 506 e-141
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g... 475 e-131
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 463 e-128
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun... 463 e-127
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] 451 e-124
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 449 e-123
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 448 e-123
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 448 e-123
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 447 e-123
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr... 441 e-121
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 441 e-121
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,... 439 e-120
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci... 429 e-117
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 426 e-116
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t... 424 e-116
ref|XP_006394670.1| hypothetical protein EUTSA_v10004166mg [Eutr... 423 e-116
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila] 423 e-116
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas... 421 e-115
ref|XP_004502613.1| PREDICTED: RNA polymerase sigma factor sigE,... 417 e-114
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,... 414 e-113
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 506 bits (1304), Expect = e-141
Identities = 271/396 (68%), Positives = 303/396 (76%), Gaps = 3/396 (0%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGTKSP 1002
P GL+A+ S H++PLRR ++LAFK DK KN L T HEPI L +T+K+ +R+R P
Sbjct: 16 PFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKP 75
Query: 1001 -KRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
KRVKAV TDEVS C+++LDY+EAAAKLENIYKLS D+S+ ED +
Sbjct: 76 SKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRV 135
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKK--EREVVDSRLTNEEKKVEGANIE 651
K S +V R + K KRLSLEKRIAL K + + V S + K E NI+
Sbjct: 136 TLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKNEDENID 195
Query: 650 RLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREPT 471
LVR+YSAST L SLDWKKMKIPPVLP SEHAWLFKLM PMK LL+V DNLQKDLGREPT
Sbjct: 196 VLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPT 255
Query: 470 DGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQA 291
DGELA A+ MS QVRR +EVG+AARNKLIKHNLRLVLFVINKYF EFANGP+FQD CQA
Sbjct: 256 DGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQA 315
Query: 290 GVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAKL 111
GVKGLI AIDRFEPKR+FRLSTYGLFWIRHAI RSMTLSSFTRVSFGLESVR+EIQRAKL
Sbjct: 316 GVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKL 375
Query: 110 ELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
EL F L R PTEEEIIEKVGISPERY EVMRASK V
Sbjct: 376 ELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSV 411
>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
[Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 475 bits (1223), Expect = e-131
Identities = 259/396 (65%), Positives = 289/396 (72%), Gaps = 3/396 (0%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKT-RRIRGTKS 1005
PLGLS + ST R RR + +AFK DK+ NT L T E I L +TAKE RR + K
Sbjct: 14 PLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETAKEHPKRRGKAKKD 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
PK V V TD+ S CTL++DY+EAAAKLENIYKLS SDVE+ +
Sbjct: 74 PKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVEGKIKGRRQRRKRS 133
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKKEREV--VDSRLTNEEKKVEGANIE 651
V RN +KRLSL+ RIALKK RE V S + + E I+
Sbjct: 134 KESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVRRKKSSENESEKID 193
Query: 650 RLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREPT 471
RLVRDYSAST L SLDW+KMKIPPVLPS EH WLFKLM PMKALLQ +NLQKDLGR+PT
Sbjct: 194 RLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQAKENLQKDLGRDPT 253
Query: 470 DGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQA 291
+ ELA A MS +QVR+ +EVG+AARNKLIKHNLRLVLF INKYF +FANGPRFQD CQA
Sbjct: 254 EDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQDFANGPRFQDLCQA 313
Query: 290 GVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAKL 111
GVKGLI AIDRFEP+R FRLSTY LFWIRHAI RSMTLSSFTRVSFGLESVR+EIQRAKL
Sbjct: 314 GVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKL 373
Query: 110 ELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
EL F+L REPTEEEII+KVGISPERYQEVMRASKPV
Sbjct: 374 ELLFELHREPTEEEIIKKVGISPERYQEVMRASKPV 409
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 463 bits (1192), Expect = e-128
Identities = 254/395 (64%), Positives = 287/395 (72%), Gaps = 2/395 (0%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGTKSP 1002
PLGLS + ST+ S +R +I+AFK +K+ NT L HE I L +T K K R + KS
Sbjct: 14 PLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETTKGKKRLGKSKKSS 73
Query: 1001 KRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXXX 822
R+KAV T EVS CTL +DY+EAAAKLENIYKLS D SDVED
Sbjct: 74 NRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKIS 132
Query: 821 XXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIAL--KKEREVVDSRLTNEEKKVEGANIER 648
RT + RN K KRLSLEKRI+L K E ++V S +++K E I+
Sbjct: 133 EGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRKDRKNENEKIDD 192
Query: 647 LVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREPTD 468
LVR+YSAST L SLDWKKMKIPPVL SSEH WLFKLM PMKALLQV ++LQ++LG EPTD
Sbjct: 193 LVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTD 252
Query: 467 GELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQAG 288
ELA A M V QVR++I VGRAARNKLIKHNLRLVLFVI KYF +FANG +FQD CQAG
Sbjct: 253 VELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAG 312
Query: 287 VKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAKLE 108
VKGLI AIDRFEPKR FRLSTYGLFWIRHAI RSMTLSSFTRVSFGLES+R EIQ+AKLE
Sbjct: 313 VKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLE 372
Query: 107 LTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
L F L R+P E+EIIEKV ISPERY EV RASKPV
Sbjct: 373 LWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPV 407
>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
gi|462415472|gb|EMJ20209.1| hypothetical protein
PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 463 bits (1191), Expect = e-127
Identities = 254/399 (63%), Positives = 296/399 (74%), Gaps = 6/399 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRI-RGTKS 1005
PLGLS +L+ RS LR+ +I+AFKTD+ T L E I L +T K+ +R+ + K
Sbjct: 14 PLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQKRLGKARKL 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDI-SDVEDTDDXXXXXXXXXXX 828
K VK+ TD S CTL++DY+EAAAKLEN+YK S + SDVED D
Sbjct: 74 AKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKK 133
Query: 827 XXXXXXXXXK-RTSSSVTRNYGKNVKRLSLEKRIALK--KEREVVDSRLTNEE-KKVEGA 660
+ RTS++V RN K KRLSL KR+ALK K+ +V+ S + + +K E
Sbjct: 134 TSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENE 193
Query: 659 NIERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGR 480
IE LVR+YS ST L SLDWKKMKIPPVL SSEHAWLFKLM PMK LL+V +NLQKDLGR
Sbjct: 194 KIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGR 253
Query: 479 EPTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDH 300
EPT+GELA A MSV QV++ +EVGRAAR+KLIKHNLRLVLFV+NKYF +FANGP+FQD
Sbjct: 254 EPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDL 313
Query: 299 CQAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQR 120
CQAGVKGLI AIDRFEPKR+FRLSTYGLFWIRHAI RSMTLSSFTRVSFGLESVR EIQ+
Sbjct: 314 CQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQK 373
Query: 119 AKLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
AKL + F L R PTE+EIIEKVGISPERY EVMRASKPV
Sbjct: 374 AKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPV 412
>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 517
Score = 451 bits (1160), Expect = e-124
Identities = 249/399 (62%), Positives = 289/399 (72%), Gaps = 6/399 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSP-LRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRI-RGTK 1008
PLGLS + S++RS L++ +I+AFK DK+ T L + I L +T KE R+ + K
Sbjct: 14 PLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVETRKEVKSRVGKAKK 73
Query: 1007 SPKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXX 828
S RVKAV TDE S T+++DY+EAAAKLENI+KLSS D+ D
Sbjct: 74 SSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSA-DVEDAVGLTSRGRRRRSKVIG 132
Query: 827 XXXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKKERE----VVDSRLTNEEKKVEGA 660
TS +V RN K KRLSL KR+ LK+++E VV R E E
Sbjct: 133 ESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLVRKRRESLNEE-E 191
Query: 659 NIERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGR 480
IE+LVR+YSAST L SLDWKKMKIPPVLPSSEH WLFKLM P+K L QV ++LQK LGR
Sbjct: 192 KIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGR 251
Query: 479 EPTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDH 300
EPT+ ELA A +SV QV+R +E GRAARNKLIKHNLRLVLFV+NKYF +F NGP+FQD
Sbjct: 252 EPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDL 311
Query: 299 CQAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQR 120
CQAGV+GLI AIDRFEPKR FRLSTYGLFWIRHAI RSMT+SSFTRVSFGLESVR EIQ+
Sbjct: 312 CQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQK 371
Query: 119 AKLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
AK+ELTF+L R PTEEEIIEKVGISPERY EVMRASKPV
Sbjct: 372 AKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPV 410
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 449 bits (1155), Expect = e-123
Identities = 249/402 (61%), Positives = 285/402 (70%), Gaps = 9/402 (2%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGTKSP 1002
P L + S H S L+R I+AFK DK+ NT L + HE +TL ++ + +R T P
Sbjct: 14 PFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKP 73
Query: 1001 -KRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
KRVKAV DE + C+LDLDY+EAAAKLENI+KLS + SD E D
Sbjct: 74 LKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKRGQKRSKKS 133
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALK--------KEREVVDSRLTNEEKKV 669
R + RN K +KRL L+KRIALK KE + V S +E K
Sbjct: 134 AN-------RPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQKETKN 186
Query: 668 EGANIERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKD 489
E I+RLVRDYSAST L SLDWKKMKIPPVLPSSEH LFKL+ PMKAL++V + LQK
Sbjct: 187 EDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKG 246
Query: 488 LGREPTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRF 309
LGREPT+GELA A M+V QVRR++EVGRAARNKLIKHNLRLVLFVINKYF +FA+GP+F
Sbjct: 247 LGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 306
Query: 308 QDHCQAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLE 129
QD CQAGVKGLI AIDRFEPKR FRLSTY LFWIRHAI RSMTLSSFTRVSFGL+SVR+E
Sbjct: 307 QDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 366
Query: 128 IQRAKLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
IQRAKLEL +L R PTE EI KVGIS ERY EVMRA+KPV
Sbjct: 367 IQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPV 408
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 516
Score = 448 bits (1153), Expect = e-123
Identities = 244/397 (61%), Positives = 288/397 (72%), Gaps = 4/397 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRG-TKS 1005
PLGLS+R ST PL+R VI++FK DK KNT L E I+LS +T+KE +R R +K
Sbjct: 14 PLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETSKENEKRSRRVSKR 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
+RV AV E S TL+LDYSEAAAKLE+IYK S S+ E D
Sbjct: 74 SERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQDHLVKRRPRTRKRI 132
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKKERE---VVDSRLTNEEKKVEGANI 654
K + +V +N K KRL+L++RIAL K +E V S ++ E I
Sbjct: 133 VEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKLKEDTEDEKI 192
Query: 653 ERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREP 474
++LVR+YS +T LASLDWKKMKIPPVLPSSEH WLFKLM PMKA+LQV +NLQ DLGREP
Sbjct: 193 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREP 252
Query: 473 TDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQ 294
TDGE+A A M S++R+K+EVGRAARNKLIKHNLRLVLFV+NKYF +FANG RFQD CQ
Sbjct: 253 TDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQ 312
Query: 293 AGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAK 114
AGVKGLI AIDRFEP R FRLSTYGLFWIRHAI RSMT SSFT+V FGLES+R+EIQ+AK
Sbjct: 313 AGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAK 372
Query: 113 LELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
LEL F+L R PT+EEII +VG+SPERY EVM+ SKPV
Sbjct: 373 LELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPV 409
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 520
Score = 448 bits (1152), Expect = e-123
Identities = 246/400 (61%), Positives = 290/400 (72%), Gaps = 7/400 (1%)
Frame = -2
Query: 1181 PLGLSARL-STHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRI-RGTK 1008
PLGLS L S+ RS LR+ +I+AF+TDK+ L E + L +T K+ +R+ + K
Sbjct: 14 PLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIETGKKVQKRLGKARK 73
Query: 1007 SPKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXX 828
PK VKA +E C L+LDY+EAAAKLEN+YK S + SDVE+ D
Sbjct: 74 LPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRK 133
Query: 827 XXXXXXXXXKRTSSS--VTRNYGKNVKRLSLEKRIALK--KEREVVDSRLTN-EEKKVEG 663
++ +S V R+ K KRLSL+KR+ALK K+ +V S + ++K+ E
Sbjct: 134 KISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSEN 193
Query: 662 ANIERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLG 483
+E LVR+YSAST L SLDWKKM+IPPVL SSEH WLFKLM PMK LL+V + LQKDLG
Sbjct: 194 EMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLG 253
Query: 482 REPTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQD 303
REP GELA A M+V QV+R +EVGRAARNKLIKHNLRLVLFVINKYF +FANGP+FQD
Sbjct: 254 REPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQD 313
Query: 302 HCQAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQ 123
CQAGVKGLI AIDRFEP+R FRLSTYGLFWIRHAI RSMTLSSFTRVSFGLESVR EIQ
Sbjct: 314 LCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQ 373
Query: 122 RAKLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
+AKLE+ L R PTE+EIIEKVGISPERY EVMRASKPV
Sbjct: 374 KAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPV 413
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 447 bits (1149), Expect = e-123
Identities = 246/401 (61%), Positives = 285/401 (71%), Gaps = 8/401 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGTKSP 1002
P L + S H S L+R I+AFK DK+ NT L + HE +TL ++ + +R T P
Sbjct: 14 PFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKP 73
Query: 1001 -KRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
KRVKAV DE + C+LDLDY+EAAAKLENI+KLS + SD E D
Sbjct: 74 LKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKRGQKRSKKS 133
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKKEREVVDSRLT-------NEEKKVE 666
R + RN K +KRL L+KRIALK ++E L NE +++
Sbjct: 134 AN-------RPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKNEADEID 186
Query: 665 GANIERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDL 486
I+RLVRDYSAST L SLDWKKMKIPPVLPSSEH LFKL+ PMKAL++V + LQK L
Sbjct: 187 DDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGL 246
Query: 485 GREPTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQ 306
GREPT+GELA A M+V QVRR++EVGRAARNKLIKHNLRLVLFVINKYF +FA+GP+FQ
Sbjct: 247 GREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQ 306
Query: 305 DHCQAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEI 126
D CQAGVKGLI AIDRFEPKR FRLSTY LFWIRHAI RSMTLSSFTRVSFGL+SVR+EI
Sbjct: 307 DLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI 366
Query: 125 QRAKLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
QRAKLEL +L R PTE EI KVGIS ERY EVMRA+KPV
Sbjct: 367 QRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPV 407
>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
gi|567858878|ref|XP_006422122.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Citrus
sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Citrus
sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Citrus
sinensis] gi|557523994|gb|ESR35361.1| hypothetical
protein CICLE_v10004760mg [Citrus clementina]
gi|557523995|gb|ESR35362.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
Length = 513
Score = 441 bits (1134), Expect = e-121
Identities = 244/395 (61%), Positives = 282/395 (71%), Gaps = 2/395 (0%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKE-KTRRIRGTKS 1005
P+GLS +HRS +R +I+AFK DK+ N L + E I L +T K + RR K
Sbjct: 14 PIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETPKRHQKRRENSRKR 71
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
+RVK V +DE S CTLD+DY+EAAAKLENIYKLS S+V+ D
Sbjct: 72 LERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRKRI 131
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKK-EREVVDSRLTNEEKKVEGANIER 648
+ V RN K KRLSL+KRI L+K E E V ++ + K E IE+
Sbjct: 132 GEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKTRKTDSKDEHEKIEK 191
Query: 647 LVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREPTD 468
LVR+YS ST L SLDWKKMKIPPVL S+EH WLFKLM PMK +QV + LQKDLGREPTD
Sbjct: 192 LVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREPTD 251
Query: 467 GELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQAG 288
ELA A MS +QV++ +EVGRAARNKLIKHNLRLVLFVI KYF +FANGPRFQD CQAG
Sbjct: 252 VELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAG 311
Query: 287 VKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAKLE 108
VKGLI AIDRFEPKR FRLSTYGLFWIRHAI RSMT+SSFTRV FGLESVR EIQRAKLE
Sbjct: 312 VKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAKLE 371
Query: 107 LTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
L F+L R PT+EEII+ V ISPERY+EVM+ASKP+
Sbjct: 372 LLFELKRVPTDEEIIQGVNISPERYREVMKASKPI 406
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 441 bits (1134), Expect = e-121
Identities = 241/394 (61%), Positives = 286/394 (72%), Gaps = 2/394 (0%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGTKSP 1002
PLGLS + ST+RS ++R++++AFK DK + L E L +T+K K RR + +
Sbjct: 14 PLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETSKGKKRRGKTNR-- 71
Query: 1001 KRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXXX 822
EVS TL++DY+EAAAKLENIYKLS D SDV D +
Sbjct: 72 ---------EVSSGTLEVDYNEAAAKLENIYKLSPATDTSDV-DINGLIRKGRQRKRKTG 121
Query: 821 XXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKK--EREVVDSRLTNEEKKVEGANIER 648
RTS ++ RN K KRLSL+KRIALKK E EVV ++ K + IE
Sbjct: 122 EGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKDDNEKIEE 181
Query: 647 LVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREPTD 468
LVR YSAST+L SLDW+KMKIPPVLPS+EHAWLFKLM PMK LL V +LQK+LGR+PTD
Sbjct: 182 LVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPTD 241
Query: 467 GELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQAG 288
GELA A M+V +VR+++EVGRAARNKLIKHNLRLV+FV+NKYF +FANGPRFQD CQAG
Sbjct: 242 GELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQAG 301
Query: 287 VKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAKLE 108
VKGLI AIDRFEP+R F+LSTY LFWIRHAI RSMTLSSFT+VSFGLESVR EIQ+AKLE
Sbjct: 302 VKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKAKLE 361
Query: 107 LTFDLGREPTEEEIIEKVGISPERYQEVMRASKP 6
L +L R PTEEEIIE+VGIS ERY EV+RA+KP
Sbjct: 362 LLIELQRRPTEEEIIERVGISAERYHEVIRAAKP 395
>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Glycine max]
gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Glycine max]
Length = 512
Score = 439 bits (1129), Expect = e-120
Identities = 240/396 (60%), Positives = 286/396 (72%), Gaps = 3/396 (0%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGT-KS 1005
PL L+ RL +H+ +R +ILAFK +K+ T L + E I L +TAK+ +R+ T +S
Sbjct: 14 PLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETAKKHQKRVGKTSES 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
KRV+AV T E S CTLD+DY+EAAAKLENIYKLS D +VED D
Sbjct: 74 LKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKV 133
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKK--EREVVDSRLTNEEKKVEGANIE 651
+V RN K KRLSL+KRIALK + EV+D K NI+
Sbjct: 134 SEERDDG---NCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKNRVQNID 190
Query: 650 RLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREPT 471
L+RDYSAST L S+DWKKMKIPPVLPSSEHAWLFKLM PMKALLQ ++L K++ +E T
Sbjct: 191 VLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEVDKEIT 249
Query: 470 DGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQA 291
GELA A MS+ QVR+ IEVGRAARNKLIKHNLRLVLFVINKYF +FA+GPRFQD CQA
Sbjct: 250 GGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQA 309
Query: 290 GVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAKL 111
GVKGLI AIDRFEPKR +LSTY LFWIRH+I RS+TLSSFTRV FGLE VR++IQR KL
Sbjct: 310 GVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKL 369
Query: 110 ELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
+LTF+L R PTEEE++E++GIS ERY EVM+ASKP+
Sbjct: 370 KLTFELQRSPTEEELVERIGISLERYHEVMKASKPI 405
>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
[Glycine max]
Length = 512
Score = 429 bits (1103), Expect = e-117
Identities = 236/398 (59%), Positives = 288/398 (72%), Gaps = 5/398 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGT-KS 1005
PL L+ RL++H+ +R +I+AFK +K L + E I L +TAK+ +R+ T +S
Sbjct: 14 PLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETAKKDQKRVGKTSES 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
KRV+AV E S CTLD+DY+EAAAKLENIYKLS D ++ED D
Sbjct: 74 LKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDIDSKVERVLWRRRKV 133
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKK--EREVVDS--RLTNEEKKVEGAN 657
V RN K KRLSL+KRI LK + EV+D ++ N + +V+ N
Sbjct: 134 GNEHDD---ENCDIVVRNQNKKAKRLSLDKRITLKNNAKEEVIDQTQKIRNVKNRVQ--N 188
Query: 656 IERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGRE 477
I+ L+RDYSAST L S+DWKKMKIP VLPSSEHAWLFKLM PMKALLQ ++LQ +G+E
Sbjct: 189 IDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAKEDLQS-VGKE 247
Query: 476 PTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHC 297
TDGELA A MS+ QVR+ IEVGRAARNKLIKHNLRLVLFVI+KYF +FA+G RFQD C
Sbjct: 248 ITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDFASGRRFQDLC 307
Query: 296 QAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRA 117
QAGVKGLI AIDRFEPKR +LSTY LFWIRH+I RS+TLSSFTRV FGLE VR++IQR
Sbjct: 308 QAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRT 367
Query: 116 KLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
KL+LTF+L R PTEEE++E++GISPERY EVM+ASKP+
Sbjct: 368 KLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPI 405
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 1 [Solanum
lycopersicum]
Length = 516
Score = 426 bits (1096), Expect = e-116
Identities = 233/397 (58%), Positives = 279/397 (70%), Gaps = 4/397 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRG-TKS 1005
PLGLS+R S PL+R VI++FK D KNT L + E I+ +T+KE +R R +K
Sbjct: 14 PLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKR 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
+RV AV T E TL+LDYSEAAAKLE+IYK S + E D
Sbjct: 74 TERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRI 132
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKKERE---VVDSRLTNEEKKVEGANI 654
K +V +N K KRL+L++RIAL K +E + S + E I
Sbjct: 133 VESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDEKI 192
Query: 653 ERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREP 474
++LVR+YS +T LASLDWKKMKIPPVLPSSEH WLFKLM PMKA+LQV +NLQ DLGREP
Sbjct: 193 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREP 252
Query: 473 TDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQ 294
TDGE+A A M S++R+K+E GRAARNKLIKHNLRLVLFV+NKYF +FAN RFQD CQ
Sbjct: 253 TDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQ 312
Query: 293 AGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAK 114
AGVKGLI AIDRFEP R FRLSTYGLFWIRHAI R MT SSFT+V FGLES+R+EIQ+AK
Sbjct: 313 AGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAK 372
Query: 113 LELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
LEL F+L R PT++EII++VG SPERY EVM+ SKP+
Sbjct: 373 LELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPI 409
>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
rpoD [Medicago truncatula]
Length = 514
Score = 424 bits (1089), Expect = e-116
Identities = 233/398 (58%), Positives = 280/398 (70%), Gaps = 5/398 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGT-KS 1005
PLGL+A+ STH L+R + +AFK DK +T L T E I AK +RI T K
Sbjct: 14 PLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPAKTHKKRIAKTNKL 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
PK+ +AVCT+E +LD+DY+EAAA LENIYKLS DI D + +
Sbjct: 74 PKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE--RKIKRVSRRGK 131
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALK---KEREVVDSRLT-NEEKKVEGAN 657
S V RN KR++L++RIALK +V+ +R N +VE
Sbjct: 132 KIGDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPTRKKRNPRSRVE--K 189
Query: 656 IERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGRE 477
I+ L+R+YS L SLDWKKMKIPPVLPSSEHA+LFKLM PMKALLQV D+LQK+L RE
Sbjct: 190 IDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQVKDDLQKELERE 249
Query: 476 PTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHC 297
PT+ E+A A M +QV++ IEVGRAARNKLIKHNLRLVLFVIN+YF +FAN PRFQD C
Sbjct: 250 PTEDEIADATNMHTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFSDFANSPRFQDLC 309
Query: 296 QAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRA 117
QAGVKGLI +IDRFEP R FRLSTY LFWIRHAI RSMTL+SF+RV FGLESVR EI+RA
Sbjct: 310 QAGVKGLITSIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLASFSRVPFGLESVRAEIRRA 369
Query: 116 KLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
K+EL+F L R PTEEEIIEKV +SPERY++VM+ASKP+
Sbjct: 370 KIELSFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPL 407
>ref|XP_006394670.1| hypothetical protein EUTSA_v10004166mg [Eutrema salsugineum]
gi|557091309|gb|ESQ31956.1| hypothetical protein
EUTSA_v10004166mg [Eutrema salsugineum]
Length = 463
Score = 423 bits (1088), Expect = e-116
Identities = 231/400 (57%), Positives = 283/400 (70%), Gaps = 7/400 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEK---TRRIRGT 1011
PLGLS+ L THRS L++ I+AFK D + N+ L E I + + KEK T+R +
Sbjct: 14 PLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAEKQKEKRVVTKR-KPC 72
Query: 1010 KSPKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXX 831
K+PK+ ++ + C+L +DY+EAAA+LE+IYKLS + D D
Sbjct: 73 KTPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATSVEDDIDGSKVKVSRRRRRK 132
Query: 830 XXXXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKK---EREVVDSRLTNEEKKV-EG 663
V RN G KRLSL+KRIALK+ E+ +V S KK E
Sbjct: 133 EGG--------EEKKVVVRNNGMKEKRLSLDKRIALKRNIQEKPLVPSAQKKVTKKQQEE 184
Query: 662 ANIERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLG 483
IERLVRDYSAS + SLDWKKMKIPPVLPS+EHAWLFKLM PMKALLQV D LQK LG
Sbjct: 185 EKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALLQVKDELQKSLG 244
Query: 482 REPTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQD 303
REP + E+A + MS ++V+RKIE+GRAARNKLIKHNLRLVLFV+NKYF +F NGP+FQD
Sbjct: 245 REPRETEIAGEINMSAAEVKRKIEIGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQD 304
Query: 302 HCQAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQ 123
CQAG++GLI AIDRFEPKR FRLSTYGLFWIRHAI RSMT S+FTRV FGLESVR+EI
Sbjct: 305 LCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIY 364
Query: 122 RAKLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
+ K+EL F+LGR PTE+E++E++ ISPERY+EV+RA+KPV
Sbjct: 365 KTKMELLFELGRLPTEDEVVERLKISPERYREVLRAAKPV 404
>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
Length = 511
Score = 423 bits (1088), Expect = e-116
Identities = 231/400 (57%), Positives = 283/400 (70%), Gaps = 7/400 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEK---TRRIRGT 1011
PLGLS+ L THRS L++ I+AFK D + N+ L E I + + KEK T+R +
Sbjct: 14 PLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAEKQKEKRVVTKR-KPC 72
Query: 1010 KSPKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXX 831
K+PK+ ++ + C+L +DY+EAAA+LE+IYKLS + D D
Sbjct: 73 KTPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATSVEDDIDGSKVKVSRRRRRK 132
Query: 830 XXXXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKK---EREVVDSRLTNEEKKV-EG 663
V RN G KRLSL+KRIALK+ E+ +V S KK E
Sbjct: 133 EGG--------EEKKVVVRNNGMKEKRLSLDKRIALKRNIQEKPLVPSAQKKVTKKQQEE 184
Query: 662 ANIERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLG 483
IERLVRDYSAS + SLDWKKMKIPPVLPS+EHAWLFKLM PMKALLQV D LQK LG
Sbjct: 185 EKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALLQVKDELQKSLG 244
Query: 482 REPTDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQD 303
REP + E+A + MS ++V+RKIE+GRAARNKLIKHNLRLVLFV+NKYF +F NGP+FQD
Sbjct: 245 REPRETEIAGEINMSAAEVKRKIEIGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQD 304
Query: 302 HCQAGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQ 123
CQAG++GLI AIDRFEPKR FRLSTYGLFWIRHAI RSMT S+FTRV FGLESVR+EI
Sbjct: 305 LCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIY 364
Query: 122 RAKLELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
+ K+EL F+LGR PTE+E++E++ ISPERY+EV+RA+KPV
Sbjct: 365 KTKMELLFELGRLPTEDEVVERLKISPERYREVLRAAKPV 404
>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
gi|561034810|gb|ESW33340.1| hypothetical protein
PHAVU_001G061400g [Phaseolus vulgaris]
Length = 511
Score = 421 bits (1082), Expect = e-115
Identities = 231/397 (58%), Positives = 288/397 (72%), Gaps = 4/397 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGTK-S 1005
PL LS +L + + +R +I+AFK +K T L + E I L +TAK+ +RI T S
Sbjct: 14 PLRLSTKLISLQQAHKRLLIVAFKGNKLNKTTLVSPKEQIPLPLETAKKHRKRIGKTNDS 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
KRV+AV TDE + TLD+DY+EAAAKLENIYKLSS +S DT+D
Sbjct: 74 VKRVRAVSTDETTPFTLDVDYNEAAAKLENIYKLSS---VSSTCDTEDIDSKTKRVLRRR 130
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALK---KEREVVDSRLTNEEKKVEGANI 654
R SV RN K KRLSL+KRIALK K+ +V ++ + ++E NI
Sbjct: 131 KNVGDEHDDRNDGSVVRNQNKKAKRLSLDKRIALKRNPKQEVIVQAQKKRDVNRIE--NI 188
Query: 653 ERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREP 474
+ L+R+YSAST L S+DWKK+KIPPVLPSSEHAWLFKLM PMK LLQV ++LQ ++G+E
Sbjct: 189 DALIREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQVREDLQ-EVGKEI 247
Query: 473 TDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQ 294
+DGELA A +SV QVR+ +EVG+AARNKLIKHNLRLVLFVINKYF +FA+GPRFQD CQ
Sbjct: 248 SDGELADANSISVIQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQ 307
Query: 293 AGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAK 114
AGVKGLI AIDRFE KR +LSTY LFWIRH+I RS+TLSS TRV FGL+ VR +I RAK
Sbjct: 308 AGVKGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPFGLDRVRADIHRAK 367
Query: 113 LELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
LEL F+L R PTE+E++E++GISPERY +V++ASKP+
Sbjct: 368 LELRFELQRSPTEKEVVERIGISPERYYDVLKASKPI 404
>ref|XP_004502613.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cicer arietinum]
Length = 513
Score = 417 bits (1071), Expect = e-114
Identities = 230/397 (57%), Positives = 276/397 (69%), Gaps = 4/397 (1%)
Frame = -2
Query: 1181 PLGLSARLSTHRSPLRRTVILAFKTDKNKNTGLATTHEPITLSTDTAKEKTRRIRGTKS- 1005
PLGL + S+H L+R + +AFK DK +T L T E I + DTAK +RI TK
Sbjct: 14 PLGLKTKFSSHHPVLKRPLTVAFKGDKQNDTTLVATQEKIPMQVDTAKTHKKRIAKTKKL 73
Query: 1004 PKRVKAVCTDEVSLCTLDLDYSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXX 825
PK+ + V T+E +LD+DY+EAAA LENIYKLS D+ + + D
Sbjct: 74 PKKARVVFTEETFPSSLDVDYNEAAAILENIYKLSPTSDVCNADYID--CKIKRVSRRGK 131
Query: 824 XXXXXXXXKRTSSSVTRNYGKNVKRLSLEKRIALKK---EREVVDSRLTNEEKKVEGANI 654
+ + V RN KRL L++RIALKK E + + N K+E I
Sbjct: 132 KIGDVSKEELDNDRVVRNQNVKAKRLDLDERIALKKNNSEDAIPTRKKRNVTSKIE--KI 189
Query: 653 ERLVRDYSASTHLASLDWKKMKIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREP 474
+ L+R+YS SLDWKKMKIPPVL SSEHA+LFKLM PMKAL QV ++LQK+L REP
Sbjct: 190 DELLREYSVPADFVSLDWKKMKIPPVLHSSEHAFLFKLMQPMKALHQVKEDLQKELAREP 249
Query: 473 TDGELAAAVGMSVSQVRRKIEVGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQ 294
T+ ++A A M +QV++ IEVGRAARNKLIKHNLRLVLFVINKYF +FANG RFQD CQ
Sbjct: 250 TEDDIADATHMRTAQVKKAIEVGRAARNKLIKHNLRLVLFVINKYFSDFANGSRFQDLCQ 309
Query: 293 AGVKGLIIAIDRFEPKRTFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAK 114
AGVKGLI AIDRFEP R FRLSTY LFWIRHAI RSMTLSSF+RV FGLESVR EI+RAK
Sbjct: 310 AGVKGLITAIDRFEPNRKFRLSTYSLFWIRHAIIRSMTLSSFSRVPFGLESVRAEIRRAK 369
Query: 113 LELTFDLGREPTEEEIIEKVGISPERYQEVMRASKPV 3
LELTF+L R PTEEE+IE+V ISPERY++VMRASKP+
Sbjct: 370 LELTFELQRPPTEEEVIERVHISPERYRDVMRASKPL 406
>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Glycine max]
Length = 488
Score = 414 bits (1063), Expect = e-113
Identities = 230/376 (61%), Positives = 270/376 (71%), Gaps = 4/376 (1%)
Frame = -2
Query: 1118 AFKTDKNKNTGLAT-THEPITLSTDTAKEKTRRIRGT-KSPKRVKAVCTDEVSLCTLDLD 945
A +T NT L + E I L +TAK+ +R+ T +S KRV+AV T E S CTLD+D
Sbjct: 10 AARTPLRLNTRLISHQQEKIPLPLETAKKHQKRVGKTSESLKRVRAVSTVETSPCTLDVD 69
Query: 944 YSEAAAKLENIYKLSSPRDISDVEDTDDXXXXXXXXXXXXXXXXXXXXKRTSSSVTRNYG 765
Y+EAAAKLENIYKLS D +VED D +V RN
Sbjct: 70 YNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKVSEERDDG---NCDNVVRNQN 126
Query: 764 KNVKRLSLEKRIALKK--EREVVDSRLTNEEKKVEGANIERLVRDYSASTHLASLDWKKM 591
K KRLSL+KRIALK + EV+D K NI+ L+RDYSAST L S+DWKKM
Sbjct: 127 KKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKM 186
Query: 590 KIPPVLPSSEHAWLFKLMPPMKALLQVMDNLQKDLGREPTDGELAAAVGMSVSQVRRKIE 411
KIPPVLPSSEHAWLFKLM PMKALLQ ++L K++ +E T GELA A MS+ QVR+ IE
Sbjct: 187 KIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEVDKEITGGELADATNMSIIQVRKAIE 245
Query: 410 VGRAARNKLIKHNLRLVLFVINKYFPEFANGPRFQDHCQAGVKGLIIAIDRFEPKRTFRL 231
VGRAARNKLIKHNLRLVLFVINKYF +FA+GPRFQD CQAGVKGLI AIDRFEPKR +L
Sbjct: 246 VGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQL 305
Query: 230 STYGLFWIRHAITRSMTLSSFTRVSFGLESVRLEIQRAKLELTFDLGREPTEEEIIEKVG 51
STY LFWIRH+I RS+TLSSFTRV FGLE VR++IQR KL+LTF+L R PTEEE++E++G
Sbjct: 306 STYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQRSPTEEELVERIG 365
Query: 50 ISPERYQEVMRASKPV 3
IS ERY EVM+ASKP+
Sbjct: 366 ISLERYHEVMKASKPI 381