BLASTX nr result

ID: Sinomenium21_contig00008333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00008333
         (770 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [...    70   6e-10
ref|XP_007208448.1| hypothetical protein PRUPE_ppa003525mg [Prun...    65   2e-08
ref|XP_006842508.1| hypothetical protein AMTR_s00077p00105110 [A...    64   6e-08
gb|EXB56008.1| ATP-dependent RNA helicase DBP2 [Morus notabilis]       60   9e-07
ref|XP_006362049.1| PREDICTED: ATP-dependent RNA helicase DBP2-l...    57   7e-06
ref|XP_004294724.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   9e-06

>ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
           gi|297745752|emb|CBI15808.3| unnamed protein product
           [Vitis vinifera]
          Length = 568

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 29/45 (64%), Positives = 40/45 (88%)
 Frame = -2

Query: 415 REVRIVLSNLSIASPTSINIEDKYRYMLTPTNLKREGAADEAWDD 281
           +E RI LSNLS+  PTS+NIE+KYR+M++P+++K EGAAD+AWDD
Sbjct: 524 KEARIALSNLSLMGPTSLNIEEKYRFMMSPSSIKTEGAADDAWDD 568


>ref|XP_007208448.1| hypothetical protein PRUPE_ppa003525mg [Prunus persica]
           gi|462404090|gb|EMJ09647.1| hypothetical protein
           PRUPE_ppa003525mg [Prunus persica]
          Length = 568

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -2

Query: 415 REVRIVLSNLSIASPTSINIEDKYRYMLTPTNLKREGAADEAWDD 281
           +  R+ LS  SI  PTS+NIEDKYR+M+  +N KREGAAD AWDD
Sbjct: 524 KHARVALSKCSITGPTSVNIEDKYRFMIADSNSKREGAADSAWDD 568


>ref|XP_006842508.1| hypothetical protein AMTR_s00077p00105110 [Amborella trichopoda]
           gi|548844594|gb|ERN04183.1| hypothetical protein
           AMTR_s00077p00105110 [Amborella trichopoda]
          Length = 561

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = -2

Query: 415 REVRIVLSNLSIASPTSINIEDKYRYMLTPTNLKREGAADEAWDD 281
           RE +   S  S++ P SIN+EDKYRYML P  +KREG+AD+AWDD
Sbjct: 517 REAKNGFSKFSLSGPASINVEDKYRYMLAPQTIKREGSADDAWDD 561


>gb|EXB56008.1| ATP-dependent RNA helicase DBP2 [Morus notabilis]
          Length = 509

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = -2

Query: 415 REVRIVLSNLSIASPTSINIEDKYRYMLTPTNLKREGAADEAWDD 281
           R+ RI +S LS+    S+NIEDKYR+M+   ++KREGAAD AWDD
Sbjct: 465 RDARIAVSKLSMNGTNSLNIEDKYRFMIASLSIKREGAADSAWDD 509


>ref|XP_006362049.1| PREDICTED: ATP-dependent RNA helicase DBP2-like [Solanum tuberosum]
          Length = 558

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 25/45 (55%), Positives = 35/45 (77%)
 Frame = -2

Query: 415 REVRIVLSNLSIASPTSINIEDKYRYMLTPTNLKREGAADEAWDD 281
           +E R  LS LS+   T +N+EDKYR+M+ P+ +K+EGAAD+AWDD
Sbjct: 515 KEARSELSKLSLVGST-VNVEDKYRHMIAPSMIKKEGAADDAWDD 558


>ref|XP_004294724.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52A-like [Fragaria
           vesca subsp. vesca]
          Length = 570

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = -2

Query: 418 HREVRIVLSNLSIASPTSINIEDKYRYMLTPTNLKREGAADEAWDD 281
           H + R+ LS  S   PTSINI DKY++M++  + ++EGAAD+AWDD
Sbjct: 525 HNQARVSLSKSSSMGPTSINIADKYKFMVSDPDNQKEGAADDAWDD 570


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