BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00007900
         (1996 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007013126.1| RNA-binding protein-related [Theobroma cacao...    81   2e-12
ref|XP_002514277.1| conserved hypothetical protein [Ricinus comm...    77   3e-11
gb|EXC03777.1| TATA-binding protein-associated factor 2N [Morus ...    77   4e-11
ref|XP_006381723.1| RNA-binding family protein [Populus trichoca...    75   1e-10
emb|CBI28047.3| unnamed protein product [Vitis vinifera]               70   3e-09
ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250...    70   3e-09

>ref|XP_007013126.1| RNA-binding protein-related [Theobroma cacao]
           gi|508783489|gb|EOY30745.1| RNA-binding protein-related
           [Theobroma cacao]
          Length = 373

 Score = 81.3 bits (199), Expect = 2e-12
 Identities = 45/110 (40%), Positives = 48/110 (43%)
 Frame = -1

Query: 505 RAGSVSPLRRRKVDHHYRDDFDDFGGPHHVXXXXXXXXXXXXXXXXXXXXXXXXXXLSPP 326
           RAGS SP+RRR  DH Y  +FD  GGP                              SPP
Sbjct: 73  RAGSSSPVRRRDADHRYGSNFDRSGGPSR------------SRDFGNGRDPGRYRDSSPP 120

Query: 325 YXXXXXXXXXXXXXXXXXXXDHGPFRNEGMSRNNPNVAPREGDWFCPDPL 176
           Y                     GPFR EGM+RNNPNV PREGDW CPDPL
Sbjct: 121 YNRGPGGGRPLGRGFDGPGYGPGPFRGEGMTRNNPNVRPREGDWVCPDPL 170


>ref|XP_002514277.1| conserved hypothetical protein [Ricinus communis]
           gi|223546733|gb|EEF48231.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 346

 Score = 77.0 bits (188), Expect = 3e-11
 Identities = 43/109 (39%), Positives = 44/109 (40%)
 Frame = -1

Query: 502 AGSVSPLRRRKVDHHYRDDFDDFGGPHHVXXXXXXXXXXXXXXXXXXXXXXXXXXLSPPY 323
           AGSVSP RRR  DH Y  D+D  GGP                              SPPY
Sbjct: 72  AGSVSPARRRDADHRYNSDYDHSGGPPR------------GREFGSGRDSGRFRDSSPPY 119

Query: 322 XXXXXXXXXXXXXXXXXXXDHGPFRNEGMSRNNPNVAPREGDWFCPDPL 176
                                GP R EGM RNNPNV PREGDW C DPL
Sbjct: 120 ARGRVGGRPPGRGFDGPGFGPGPLRGEGMGRNNPNVRPREGDWICSDPL 168


>gb|EXC03777.1| TATA-binding protein-associated factor 2N [Morus notabilis]
          Length = 369

 Score = 76.6 bits (187), Expect = 4e-11
 Identities = 45/115 (39%), Positives = 47/115 (40%)
 Frame = -1

Query: 520 SGNGKRAGSVSPLRRRKVDHHYRDDFDDFGGPHHVXXXXXXXXXXXXXXXXXXXXXXXXX 341
           SG   RAGS SP+RRR  DH Y  DFD                                 
Sbjct: 63  SGYRLRAGSTSPVRRRDSDHRYNSDFDHLRS------------LARSREVGAARDAGRFR 110

Query: 340 XLSPPYXXXXXXXXXXXXXXXXXXXDHGPFRNEGMSRNNPNVAPREGDWFCPDPL 176
             SPPY                     G FR EGMSRNNPNV PREGDW+CPDPL
Sbjct: 111 DYSPPYARGRGSGRPFGRGPDGPDFGPGLFRGEGMSRNNPNVRPREGDWYCPDPL 165


>ref|XP_006381723.1| RNA-binding family protein [Populus trichocarpa]
           gi|550336476|gb|ERP59520.1| RNA-binding family protein
           [Populus trichocarpa]
          Length = 333

 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 46/120 (38%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
 Frame = -1

Query: 529 PSFSGNGKR--AGSVSPLRRRKVDHHYRDDFDDFGGPHHVXXXXXXXXXXXXXXXXXXXX 356
           PS S  G R  AGS SP+RRR  D  Y  DFD+ G P                       
Sbjct: 24  PSVSDGGYRLRAGSGSPVRRRDADRRYSSDFDNSGAPPR------------GRDFSNGRD 71

Query: 355 XXXXXXLSPPYXXXXXXXXXXXXXXXXXXXDHGPFRNEGMSRNNPNVAPREGDWFCPDPL 176
                  SPPY                     GP R EG+SRNNPNV PREGDW C DPL
Sbjct: 72  RGRFRDSSPPYARGRGGGRPLGRGFDGPGFGPGPLRGEGVSRNNPNVRPREGDWICSDPL 131


>emb|CBI28047.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 42/110 (38%), Positives = 46/110 (41%)
 Frame = -1

Query: 505 RAGSVSPLRRRKVDHHYRDDFDDFGGPHHVXXXXXXXXXXXXXXXXXXXXXXXXXXLSPP 326
           RAGS SP+RRR  DH Y  +FD  GG                               SPP
Sbjct: 163 RAGSSSPVRRRNPDHRYNSEFDHSGG------------LPRSRGFGSERDPGRYRNHSPP 210

Query: 325 YXXXXXXXXXXXXXXXXXXXDHGPFRNEGMSRNNPNVAPREGDWFCPDPL 176
           Y                     GP R+EG+ RNNPNV PREGDW CPDPL
Sbjct: 211 YGRGRGGGRSFGRGLDGPGFGPGPIRSEGI-RNNPNVRPREGDWVCPDPL 259


>ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250827 [Vitis vinifera]
          Length = 360

 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 42/110 (38%), Positives = 46/110 (41%)
 Frame = -1

Query: 505 RAGSVSPLRRRKVDHHYRDDFDDFGGPHHVXXXXXXXXXXXXXXXXXXXXXXXXXXLSPP 326
           RAGS SP+RRR  DH Y  +FD  GG                               SPP
Sbjct: 63  RAGSSSPVRRRNPDHRYNSEFDHSGG------------LPRSRGFGSERDPGRYRNHSPP 110

Query: 325 YXXXXXXXXXXXXXXXXXXXDHGPFRNEGMSRNNPNVAPREGDWFCPDPL 176
           Y                     GP R+EG+ RNNPNV PREGDW CPDPL
Sbjct: 111 YGRGRGGGRSFGRGLDGPGFGPGPIRSEGI-RNNPNVRPREGDWVCPDPL 159