BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00007210
         (1360 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]   309   2e-81
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   308   4e-81
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              308   4e-81
gb|EXB41552.1| Transcription initiation factor IIF subunit alpha...   294   7e-77
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   290   1e-75
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   288   5e-75
ref|XP_006449856.1| hypothetical protein CICLE_v10014841mg [Citr...   288   5e-75
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   288   5e-75
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   286   2e-74
ref|XP_002322538.2| transcription initiation factor IIF alpha su...   280   8e-73
ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phas...   276   1e-71
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   270   1e-69
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|...   269   2e-69
ref|XP_007026249.1| Transcription activators,DNA binding,RNA pol...   266   2e-68
ref|XP_007026248.1| Transcription activators,DNA binding,RNA pol...   266   2e-68
ref|XP_007026247.1| Transcription activators,DNA binding,RNA pol...   266   2e-68
ref|XP_004250258.1| PREDICTED: transcription initiation factor I...   265   5e-68
ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [A...   262   2e-67
gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus...   262   3e-67
gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus...   262   3e-67

>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score =  309 bits (791), Expect = 2e-81
 Identities = 191/378 (50%), Positives = 208/378 (55%), Gaps = 4/378 (1%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVG--GSGRG 176
            AQYKQLTLEEAEEKMK R++ A GY+RWMMK A+NGPAAFGEV++ DDK+  G  G GRG
Sbjct: 62   AQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRG 121

Query: 177  RRKATADEEEENASXXXXXXXXXXXX-KNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXX 353
            R+K T DEEE N S             KNRL LNK                         
Sbjct: 122  RKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKG 181

Query: 354  XXXWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXX 533
               WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP                         
Sbjct: 182  DD-WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKE 240

Query: 534  XXXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSA 713
                                       I +SPVLAPKQKD PKEEP DNSP K+ P  SA
Sbjct: 241  LKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSAPA-SA 299

Query: 714  RXXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKD-GPTPSLKNNPAXXXX 890
            R                 DD K  NG P KKVKTENESKSS+KD GP+PS     A    
Sbjct: 300  RSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVT--ATAKG 357

Query: 891  XXXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQR 1070
                            VTEDEIRAVLLQ A VTTQDLV +FKARLK++EDK AFADIL+R
Sbjct: 358  TPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRR 417

Query: 1071 ISKIQKTGGHKYVLLRDK 1124
            ISKIQKT G  YV+LRDK
Sbjct: 418  ISKIQKTNGPNYVVLRDK 435


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  308 bits (789), Expect = 4e-81
 Identities = 191/378 (50%), Positives = 208/378 (55%), Gaps = 4/378 (1%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVG--GSGRG 176
            AQYKQLTLEEAEEKMK R++ A GY+RWMMK A+NGPAAFGEV++ DDK+  G  G GRG
Sbjct: 161  AQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRG 220

Query: 177  RRKATADEEEENASXXXXXXXXXXXX-KNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXX 353
            R+K T DEEE N S             KNRL LNK                         
Sbjct: 221  RKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKG 280

Query: 354  XXXWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXX 533
               WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP                         
Sbjct: 281  DD-WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKE 339

Query: 534  XXXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSA 713
                                       I +SPVLAPKQKD PKEEP DNSP K+  T SA
Sbjct: 340  LKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSA-TASA 398

Query: 714  RXXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKD-GPTPSLKNNPAXXXX 890
            R                 DD K  NG P KKVKTENESKSS+KD GP+PS     A    
Sbjct: 399  RSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVT--ATPKG 456

Query: 891  XXXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQR 1070
                            VTEDEIRAVLLQ A VTTQDLV +FKARLK++EDK AFADIL+R
Sbjct: 457  TPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRR 516

Query: 1071 ISKIQKTGGHKYVLLRDK 1124
            ISKIQKT G  YV+LRDK
Sbjct: 517  ISKIQKTNGPNYVVLRDK 534


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  308 bits (789), Expect = 4e-81
 Identities = 191/378 (50%), Positives = 208/378 (55%), Gaps = 4/378 (1%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVG--GSGRG 176
            AQYKQLTLEEAEEKMK R++ A GY+RWMMK A+NGPAAFGEV++ DDK+  G  G GRG
Sbjct: 166  AQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRG 225

Query: 177  RRKATADEEEENASXXXXXXXXXXXX-KNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXX 353
            R+K T DEEE N S             KNRL LNK                         
Sbjct: 226  RKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKG 285

Query: 354  XXXWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXX 533
               WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP                         
Sbjct: 286  DD-WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKE 344

Query: 534  XXXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSA 713
                                       I +SPVLAPKQKD PKEEP DNSP K+  T SA
Sbjct: 345  LKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSA-TASA 403

Query: 714  RXXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKD-GPTPSLKNNPAXXXX 890
            R                 DD K  NG P KKVKTENESKSS+KD GP+PS     A    
Sbjct: 404  RSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVT--ATPKG 461

Query: 891  XXXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQR 1070
                            VTEDEIRAVLLQ A VTTQDLV +FKARLK++EDK AFADIL+R
Sbjct: 462  TPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRR 521

Query: 1071 ISKIQKTGGHKYVLLRDK 1124
            ISKIQKT G  YV+LRDK
Sbjct: 522  ISKIQKTNGPNYVVLRDK 539


>gb|EXB41552.1| Transcription initiation factor IIF subunit alpha [Morus notabilis]
          Length = 483

 Score =  294 bits (752), Expect = 7e-77
 Identities = 179/376 (47%), Positives = 200/376 (53%), Gaps = 2/376 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK RKK A GY+RWMMK A+NGPAAFGE D  DDKD+    GRGRR
Sbjct: 112  AQYKQLTLEEAEEKMKNRKKTADGYQRWMMKAANNGPAAFGEKDNFDDKDSGAAGGRGRR 171

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            KA+ADE E N S             KNRL LNK                           
Sbjct: 172  KASADEGEGNVSDKGDEDEEDEVARKNRLGLNKRGGDDDDEEGPRGDDLDLDDDDIEKGD 231

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP-XXXXXXXXXXXXXXXXXXXXXXXXXX 536
             WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP                           
Sbjct: 232  DWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEDDEDEDNEEEGGLSKSGKELK 291

Query: 537  XXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSAR 716
                     N                I +SP +APKQKD  KEEP +NSP+K  P+ SA+
Sbjct: 292  KLLGRAGGLNDSDAEDDDDSEEMDEDIGVSPTVAPKQKDAVKEEPAENSPAKPTPSASAK 351

Query: 717  XXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXXX 896
                             DD K AN AP+KKVKTENE K S    P P  KNN        
Sbjct: 352  GTPTTSKSAKGKRKLNGDDVKPANVAPSKKVKTENEQKPSE---PAPPSKNN-VPSKGTP 407

Query: 897  XXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRIS 1076
                          VTE+EIRAVL+Q   VTTQDLV +F+ARL+T  DK+AFA+IL+RIS
Sbjct: 408  SSSTKAAVTSSAGPVTEEEIRAVLIQKTPVTTQDLVAKFRARLRTPADKNAFAEILRRIS 467

Query: 1077 KIQKTGGHKYVLLRDK 1124
            KIQKT G  YV+LR+K
Sbjct: 468  KIQKTNGSNYVVLREK 483


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  290 bits (741), Expect = 1e-75
 Identities = 177/375 (47%), Positives = 203/375 (54%), Gaps = 1/375 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKM+ R+K A GYERWMMK A+NGPAAFGEV++ DDKD+   SGRGR+
Sbjct: 167  AQYKQLTLEEAEEKMRNRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRK 226

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            KA  D+EE N S             KNRL LNK                           
Sbjct: 227  KAAGDDEEGNVSDRGDEDEEEEAARKNRLGLNKR-GGDDDEEGPRGGDHDIDDDDIEKGD 285

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGND EEREDLAPEVPAPP                           
Sbjct: 286  DWEHEEIFTDDDEAVGNDREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKK 345

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSARX 719
                    N                +S+SPVLAPKQ   PKEEP DNSP+K + + S++ 
Sbjct: 346  LLGRAGGLNDSDAEDDDDDDDMDEDVSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKG 403

Query: 720  XXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXXXX 899
                            D+AK  N AP KKVKTENE K + K+   P+ K++         
Sbjct: 404  TPSTSKSAKGKRKLNSDEAKQTNVAPQKKVKTENELKPTVKEESAPTSKSSAT-----PK 458

Query: 900  XXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRISK 1079
                         VTE+EIRAVLLQ   VTTQDLV RFK+RLK+ EDK AFADIL+RISK
Sbjct: 459  AAPPSAKTGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISK 518

Query: 1080 IQKTGGHKYVLLRDK 1124
            IQKT G  YV+LRDK
Sbjct: 519  IQKTSGSSYVVLRDK 533


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis]
          Length = 538

 Score =  288 bits (736), Expect = 5e-75
 Identities = 177/378 (46%), Positives = 206/378 (54%), Gaps = 4/378 (1%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GYERWMMK A+NG AAFGEV++ DDK++ G  GRGR 
Sbjct: 166  AQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRS 225

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K + DE+E N S             KNRL LNK                           
Sbjct: 226  KKSGDEDEGNVSDRGEEDEDEEAKRKNRLGLNKR-GEDDDEEGPRGGDLDLDEDDVEKGD 284

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP                           
Sbjct: 285  DWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKL 344

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEP-KEEPVDNSPSKAVPTGSAR 716
                                     +  SP+LAPK KD P KEEP DNSP+K  P+GS R
Sbjct: 345  LGRANGLNESDAEDDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGR 404

Query: 717  XXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNN-PAXXXXX 893
                             DDA+A +GAP KKVKTENE+KSS++D    + K++ PA     
Sbjct: 405  ATPSTSKSAKGKRKSNGDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPA----K 460

Query: 894  XXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRI 1073
                           VT +EIRAVLLQ A VTTQDLV +FK RL++ ED++AFADIL+RI
Sbjct: 461  GASSSRTGSTSASGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRI 520

Query: 1074 SKIQKTGG-HKYVLLRDK 1124
            SKIQKT G   YV+LR+K
Sbjct: 521  SKIQKTNGPSNYVVLREK 538


>ref|XP_006449856.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|557552467|gb|ESR63096.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 420

 Score =  288 bits (736), Expect = 5e-75
 Identities = 177/378 (46%), Positives = 206/378 (54%), Gaps = 4/378 (1%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GYERWMMK A+NG AAFGEV++ DDK++ G  GRGR 
Sbjct: 48   AQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRS 107

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K + DE+E N S             KNRL LNK                           
Sbjct: 108  KKSGDEDEGNVSDRGEEDEDEEAKRKNRLGLNKR-GEDDDEEGPRGGDLDLDEDDVEKGD 166

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP                           
Sbjct: 167  DWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKL 226

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEP-KEEPVDNSPSKAVPTGSAR 716
                                     +  SP+LAPK KD P KEEP DNSP+K  P+GS R
Sbjct: 227  LGRANGLNESDAEDDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGR 286

Query: 717  XXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNN-PAXXXXX 893
                             DDA+A +GAP KKVKTENE+KSS++D    + K++ PA     
Sbjct: 287  ATPSTSKSAKGKRKSNGDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPA----K 342

Query: 894  XXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRI 1073
                           VT +EIRAVLLQ A VTTQDLV +FK RL++ ED++AFADIL+RI
Sbjct: 343  GASSSRTGSTSASGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRI 402

Query: 1074 SKIQKTGG-HKYVLLRDK 1124
            SKIQKT G   YV+LR+K
Sbjct: 403  SKIQKTNGPSNYVVLREK 420


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  288 bits (736), Expect = 5e-75
 Identities = 177/378 (46%), Positives = 206/378 (54%), Gaps = 4/378 (1%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GYERWMMK A+NG AAFGEV++ DDK++ G  GRGR 
Sbjct: 166  AQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRS 225

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K + DE+E N S             KNRL LNK                           
Sbjct: 226  KKSGDEDEGNVSDRGEEDEDEEAKRKNRLGLNKR-GEDDDEEGPRGGDLDLDEDDVEKGD 284

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP                           
Sbjct: 285  DWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKL 344

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEP-KEEPVDNSPSKAVPTGSAR 716
                                     +  SP+LAPK KD P KEEP DNSP+K  P+GS R
Sbjct: 345  LGRANGLNESDAEDDDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGR 404

Query: 717  XXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNN-PAXXXXX 893
                             DDA+A +GAP KKVKTENE+KSS++D    + K++ PA     
Sbjct: 405  ATPSTSKSAKGKRKSNGDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPA----K 460

Query: 894  XXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRI 1073
                           VT +EIRAVLLQ A VTTQDLV +FK RL++ ED++AFADIL+RI
Sbjct: 461  GASSSRTGSTSASGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRI 520

Query: 1074 SKIQKTGG-HKYVLLRDK 1124
            SKIQKT G   YV+LR+K
Sbjct: 521  SKIQKTNGPSNYVVLREK 538


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 541

 Score =  286 bits (731), Expect = 2e-74
 Identities = 180/377 (47%), Positives = 200/377 (53%), Gaps = 3/377 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRG-R 179
            A YKQLTLEEAEEKMK R+K A GYERWMMK A NG AAFGEV++ DDKD V   GRG R
Sbjct: 168  AHYKQLTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGR 227

Query: 180  RKATADEEEENASXXXXXXXXXXXX-KNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXX 356
            +KA  D++E N S             K+RL LNK                          
Sbjct: 228  KKANGDDDEGNVSDKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGD 287

Query: 357  XXWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXX 536
              WEHEEIFTDDDEAV  DPEEREDLAPEVPAPP                          
Sbjct: 288  D-WEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELK 346

Query: 537  XXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDE-PKEEPVDNSPSKAVPTGSA 713
                     N                IS  PVLAPKQKD  PKEEP DNSP+K  P GSA
Sbjct: 347  KLLGKANGLNESDAEDDDDDDDMDDDIS--PVLAPKQKDAVPKEEPADNSPAKPTPPGSA 404

Query: 714  RXXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXX 893
            +                 DDAK +NGAP KKVKTENE K + K+  +P+ K   A     
Sbjct: 405  KGTPSTSKSAKGKRKLNADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGT-ATPKIM 463

Query: 894  XXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRI 1073
                           VTE+EIRAVLLQ   VTTQDLV RFK+RL+T EDK AFADIL+RI
Sbjct: 464  PSSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRI 523

Query: 1074 SKIQKTGGHKYVLLRDK 1124
            SKIQKT G  +V+LRDK
Sbjct: 524  SKIQKTSGSNFVVLRDK 540


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 540

 Score =  280 bits (717), Expect = 8e-73
 Identities = 178/377 (47%), Positives = 202/377 (53%), Gaps = 3/377 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGR-GR 179
            A YKQLTLEEAEEKMK R+K A GYERWMMK A+NG AAFGEV++ DDK+ V   GR GR
Sbjct: 168  AHYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGR 227

Query: 180  RKATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXX 356
            RKA+ D++E N S             K+RL LNK                          
Sbjct: 228  RKASGDDDEGNVSDRGEEDEEEEAGRKSRLGLNKQ-GGDDDEEGPRGGDLDMDDDDIEKG 286

Query: 357  XXWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXX 536
              WEHEEIFTDDDEAV  DPEEREDLAPEVPAPP                          
Sbjct: 287  DDWEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELK 346

Query: 537  XXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKD-EPKEEPVDNSPSKAVPTGSA 713
                     N                I  SPVLAPKQKD  PKEE  D SP+K  P+GSA
Sbjct: 347  KLLGKANGLNESDVEDDDDDEDMDDDI--SPVLAPKQKDVVPKEEAADISPAKPTPSGSA 404

Query: 714  RXXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXX 893
            +                 +DAK++NGAP KKVKTENE K + K+  +P+ K   A     
Sbjct: 405  KGTPSTSKSAKGKRKLNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGT-ATPKVT 463

Query: 894  XXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRI 1073
                           VTE+EIRAVLLQ   VTTQDLV RFK+RL+T EDK AFADIL+RI
Sbjct: 464  PPSSKTGSTSGSTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRI 523

Query: 1074 SKIQKTGGHKYVLLRDK 1124
            SKIQKT G  YV+LRDK
Sbjct: 524  SKIQKTSGSNYVVLRDK 540


>ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
            gi|561027365|gb|ESW26005.1| hypothetical protein
            PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  276 bits (707), Expect = 1e-71
 Identities = 171/377 (45%), Positives = 196/377 (51%), Gaps = 3/377 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKD-NVGGSGRGR 179
            AQYKQLTLEEAEEKMK RKK A GYERWMMK A+NGPAAFGE  R D+K+ NVGG G+ R
Sbjct: 166  AQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNR 225

Query: 180  RKATADEEEENASXXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            +K   DEE   +             ++RL LNK                           
Sbjct: 226  KKTDEDEEGHVSDKGEEDEDDEVARRSRLGLNKK-GGDDDEEGPRGGDLDQDDDDIEKGD 284

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP                           
Sbjct: 285  DWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPEIKQDDEDEDEDNEEGGGLSKSGKELK 344

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSARX 719
                    N                  + PV+A K KD PKEEP DNSPSK   TG+AR 
Sbjct: 345  KLLRTSGLNESDAEDDDDDDDVDDEAGVPPVIASKPKDAPKEEPADNSPSKPAVTGTAR- 403

Query: 720  XXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNN--PAXXXXX 893
                            ++ KAANGAP KKVK ENE KS+ KD    + KNN         
Sbjct: 404  GTLSTSKPSKGKRKLNEETKAANGAPPKKVKIENEPKSTVKDENGSTSKNNTPSKGVPPT 463

Query: 894  XXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRI 1073
                           V+E+EIRAVL+Q   +TTQDLV +F+ARL+  EDK AFADIL+RI
Sbjct: 464  PSSKGGSSSPIASGPVSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRI 523

Query: 1074 SKIQKTGGHKYVLLRDK 1124
            SKIQKT    YV+LRD+
Sbjct: 524  SKIQKTNASSYVILRDR 540


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  270 bits (690), Expect = 1e-69
 Identities = 175/377 (46%), Positives = 195/377 (51%), Gaps = 3/377 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGR-GR 179
            A YKQLTLEEAEEKMK R+K A GYERWMMK A NG AAFGEV++ DDKD V   GR GR
Sbjct: 168  AHYKQLTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGR 227

Query: 180  RKATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXX 356
            +KA  D++E N S             K+RL LNK                          
Sbjct: 228  KKANGDDDEGNVSDKGEEDEEEEAGRKSRLGLNKG-GGDDDEEGPRGGDLDMDDDDIEKG 286

Query: 357  XXWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXX 536
              WEHEEIFTDDDEAV  DPEEREDLAPEVPAPP                          
Sbjct: 287  DDWEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELK 346

Query: 537  XXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDE-PKEEPVDNSPSKAVPTGSA 713
                     N                I  SPVLAPKQKD  PKEEP DNSP+K  P GSA
Sbjct: 347  KLLGKANGLNESDAEDDDDDDDMDDDI--SPVLAPKQKDAVPKEEPADNSPAKPTPPGSA 404

Query: 714  RXXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXX 893
            +                 DDAK +NGAP KK     E K + K+  +P+ K   A     
Sbjct: 405  KGTPSTSKSAKGKRKLNADDAKTSNGAPVKK-----EVKPTVKEESSPATKGT-ATPKIM 458

Query: 894  XXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRI 1073
                           VTE+EIRAVLLQ   VTTQDLV RFK+RL+T EDK AFADIL+RI
Sbjct: 459  PSSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRI 518

Query: 1074 SKIQKTGGHKYVLLRDK 1124
            SKIQKT G  +V+LRDK
Sbjct: 519  SKIQKTSGSNFVVLRDK 535


>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|223530933|gb|EEF32792.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 584

 Score =  269 bits (688), Expect = 2e-69
 Identities = 165/377 (43%), Positives = 197/377 (52%), Gaps = 3/377 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYK LTLEEAEEKMK R+K A GYERWMMK A+NGPAAFGE+++ DDKD    SGRGRR
Sbjct: 210  AQYKMLTLEEAEEKMKNRRKTADGYERWMMKAANNGPAAFGEMEKPDDKDVRTTSGRGRR 269

Query: 183  KATADEEEEN--ASXXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXX 356
            K   D+++E   +             KNRL LN+                          
Sbjct: 270  KTAGDDDDEGKISDKGEEDEEEEMSRKNRLGLNRQ-GGGDDDEGPRGGDHDMDDDDVEKG 328

Query: 357  XXWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXX 536
              WEHEEIFTDDDEAVGNDPEER+DL PE+PAPP                          
Sbjct: 329  DDWEHEEIFTDDDEAVGNDPEERQDLGPELPAPPEIKQDEDDEDEENEEGGLSKSGKELK 388

Query: 537  XXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEP-KEEPVDNSPSKAVPTGSA 713
                     +                  +SPVLA KQKD P KEEP DNSP+K + + SA
Sbjct: 389  ALLGRSGGLD-DTDAEDDDDDDMDEDTGLSPVLAQKQKDAPIKEEPGDNSPAKPMHSSSA 447

Query: 714  RXXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXX 893
            +                 DD K +N +P KKVKTENESK   K+   P+ K+  +     
Sbjct: 448  KGALSASKSAKGKRKTNGDDGKTSNVSPQKKVKTENESKHIVKEENVPTSKSKSSANPKG 507

Query: 894  XXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRI 1073
                           VT++EI+AVLLQ   VTTQDLV +FK+RLKTREDK AF   L+RI
Sbjct: 508  AAASLRTESTSSTGFVTDEEIKAVLLQNGPVTTQDLVAKFKSRLKTREDKEAFTHTLKRI 567

Query: 1074 SKIQKTGGHKYVLLRDK 1124
            S+IQKT G  YV+LRDK
Sbjct: 568  SRIQKTSGGSYVVLRDK 584


>ref|XP_007026249.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 3 [Theobroma cacao] gi|508781615|gb|EOY28871.1|
            Transcription activators,DNA binding,RNA polymerase II
            transcription factors,catalytics,transcription initiation
            factors isoform 3 [Theobroma cacao]
          Length = 496

 Score =  266 bits (680), Expect = 2e-68
 Identities = 173/388 (44%), Positives = 199/388 (51%), Gaps = 14/388 (3%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GYERWMMK A+NG AAFGEV++ DDKDN    G+GR+
Sbjct: 113  AQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRK 172

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K T D++E + S             KNRL L+K                           
Sbjct: 173  KPTGDDDEGHVSDRGEEDEEEEAARKNRLGLDKK-GGDDDEEGPRGGDLDMDDDDIEKGD 231

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGN+PEER DLAPEVPAPP                           
Sbjct: 232  DWEHEEIFTDDDEAVGNEPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKL 290

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSARX 719
                    +                +S +P  A KQKD PKEEP DNSP K   + SAR 
Sbjct: 291  LGKAGGLND--SDADDDDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPASSASARG 348

Query: 720  XXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGP------------TPSL 863
                            DD KA+NG P KKVK+E +SKSS K+              TPS 
Sbjct: 349  TSTASKSAKGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGTPSS 408

Query: 864  KNNPAXXXXXXXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDK 1043
                +                    VTE+EIRAVLLQ A VTT DLV +FKARLK+ EDK
Sbjct: 409  AKAGSTSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDK 468

Query: 1044 SAFADILQRISKIQKTGG-HKYVLLRDK 1124
             AFADIL+RISKIQKT G + YV+LRDK
Sbjct: 469  KAFADILRRISKIQKTNGPNNYVVLRDK 496


>ref|XP_007026248.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 2 [Theobroma cacao] gi|508781614|gb|EOY28870.1|
            Transcription activators,DNA binding,RNA polymerase II
            transcription factors,catalytics,transcription initiation
            factors isoform 2 [Theobroma cacao]
          Length = 473

 Score =  266 bits (680), Expect = 2e-68
 Identities = 173/388 (44%), Positives = 199/388 (51%), Gaps = 14/388 (3%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GYERWMMK A+NG AAFGEV++ DDKDN    G+GR+
Sbjct: 90   AQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRK 149

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K T D++E + S             KNRL L+K                           
Sbjct: 150  KPTGDDDEGHVSDRGEEDEEEEAARKNRLGLDKK-GGDDDEEGPRGGDLDMDDDDIEKGD 208

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGN+PEER DLAPEVPAPP                           
Sbjct: 209  DWEHEEIFTDDDEAVGNEPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKL 267

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSARX 719
                    +                +S +P  A KQKD PKEEP DNSP K   + SAR 
Sbjct: 268  LGKAGGLND--SDADDDDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPASSASARG 325

Query: 720  XXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGP------------TPSL 863
                            DD KA+NG P KKVK+E +SKSS K+              TPS 
Sbjct: 326  TSTASKSAKGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGTPSS 385

Query: 864  KNNPAXXXXXXXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDK 1043
                +                    VTE+EIRAVLLQ A VTT DLV +FKARLK+ EDK
Sbjct: 386  AKAGSTSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDK 445

Query: 1044 SAFADILQRISKIQKTGG-HKYVLLRDK 1124
             AFADIL+RISKIQKT G + YV+LRDK
Sbjct: 446  KAFADILRRISKIQKTNGPNNYVVLRDK 473


>ref|XP_007026247.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 1 [Theobroma cacao] gi|508781613|gb|EOY28869.1|
            Transcription activators,DNA binding,RNA polymerase II
            transcription factors,catalytics,transcription initiation
            factors isoform 1 [Theobroma cacao]
          Length = 549

 Score =  266 bits (680), Expect = 2e-68
 Identities = 173/388 (44%), Positives = 199/388 (51%), Gaps = 14/388 (3%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GYERWMMK A+NG AAFGEV++ DDKDN    G+GR+
Sbjct: 166  AQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRK 225

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K T D++E + S             KNRL L+K                           
Sbjct: 226  KPTGDDDEGHVSDRGEEDEEEEAARKNRLGLDKK-GGDDDEEGPRGGDLDMDDDDIEKGD 284

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGN+PEER DLAPEVPAPP                           
Sbjct: 285  DWEHEEIFTDDDEAVGNEPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKL 343

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSARX 719
                    +                +S +P  A KQKD PKEEP DNSP K   + SAR 
Sbjct: 344  LGKAGGLND--SDADDDDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPASSASARG 401

Query: 720  XXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGP------------TPSL 863
                            DD KA+NG P KKVK+E +SKSS K+              TPS 
Sbjct: 402  TSTASKSAKGKRKANGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGTPSS 461

Query: 864  KNNPAXXXXXXXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDK 1043
                +                    VTE+EIRAVLLQ A VTT DLV +FKARLK+ EDK
Sbjct: 462  AKAGSTSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDK 521

Query: 1044 SAFADILQRISKIQKTGG-HKYVLLRDK 1124
             AFADIL+RISKIQKT G + YV+LRDK
Sbjct: 522  KAFADILRRISKIQKTNGPNNYVVLRDK 549


>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Solanum lycopersicum]
          Length = 534

 Score =  265 bits (676), Expect = 5e-68
 Identities = 171/377 (45%), Positives = 202/377 (53%), Gaps = 3/377 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GY+RWMMK A+NGPAAFGE++R DDK+   G  RGR+
Sbjct: 165  AQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGELERFDDKEGGSGGTRGRK 224

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K + DE+E NAS             KNRL LNK                           
Sbjct: 225  KTSGDEDEGNASDHGDEDEEEEAARKNRLGLNKR-GIDDDEEGPRGGDLDLDDDDIEKGD 283

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGNDPEEREDLAPE+PAPP                           
Sbjct: 284  DWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPP--EIKQDEDDEEEGEEEGGGLSKSGKE 341

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVD-NSPSKAVPTGSAR 716
                    N                  +SPVLAPK K+ PKEEPV+ NSP KA  +GS R
Sbjct: 342  LKKLLGKANGLNESDEDDDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKAAASGSNR 401

Query: 717  XXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXXX 896
                             D++K  +GAP KKVKTE ++K    +  TPS   N A      
Sbjct: 402  -GTPTSKSAKTKRKANGDESKPTSGAPLKKVKTEADAKPGKDE--TPSSAKNTA-LPKGA 457

Query: 897  XXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRIS 1076
                          VTEDEIRAVLLQ   VTTQDLV +FK+RLK +EDK+AFA++L++IS
Sbjct: 458  SSSSKTAPSSATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKIS 517

Query: 1077 KIQK-TGGHKYVLLRDK 1124
            KIQK T G  YV+LR++
Sbjct: 518  KIQKTTTGSSYVVLRER 534


>ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [Amborella trichopoda]
            gi|548861791|gb|ERN19162.1| hypothetical protein
            AMTR_s00061p00167160 [Amborella trichopoda]
          Length = 558

 Score =  262 bits (670), Expect = 2e-67
 Identities = 166/383 (43%), Positives = 202/383 (52%), Gaps = 9/383 (2%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+KNA GYERW+MK A+NG +AF ++++ D     GG+  GRR
Sbjct: 177  AQYKQLTLEEAEEKMKNRRKNAEGYERWIMKAANNGASAFRDMEKIDGSGGNGGASGGRR 236

Query: 183  KATADEEEENA---SXXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXX 353
            +  + +E+++A                KNRL LNK                         
Sbjct: 237  RKGSGDEDDDAVRSDREGEDDDDEEARKNRLGLNKKTFDDEGEEVPRGDDHDFDDDDIEK 296

Query: 354  XXXWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP--XXXXXXXXXXXXXXXXXXXXXXX 527
               WEHEEIFTDDDEAVGNDPEERED APEVPAPP                         
Sbjct: 297  GDDWEHEEIFTDDDEAVGNDPEEREDFAPEVPAPPEIKQDDEDEDEGNEDEEGGLSKSGR 356

Query: 528  XXXXXXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTG 707
                        N                +  S VLAPKQK E KEEPVDNSP+K   +G
Sbjct: 357  ELKKLLGRAGGLNESDGDDDDDDDDLDDDMGTSSVLAPKQK-EVKEEPVDNSPTKTATSG 415

Query: 708  SARXXXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSS--KDGPTPSLKNN-PA 878
            S R                 DDAK A  AP+KK K EN+SK ++  KD P  + ++N P 
Sbjct: 416  SNRGTPSTSKSTKAKRKSGSDDAKPAASAPSKKPKIENDSKPATTVKDEPASAQRSNTPV 475

Query: 879  XXXXXXXXXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFAD 1058
                                VTEDEIRAVLLQ+A VTTQDLVG+FKARL+T+EDK +FA 
Sbjct: 476  KLPSSSGTKPAGSPVAAAVPVTEDEIRAVLLQMAPVTTQDLVGKFKARLRTKEDKDSFAA 535

Query: 1059 ILQRISKIQKT-GGHKYVLLRDK 1124
            +L++IS+IQKT GG  +V+LRDK
Sbjct: 536  VLKKISRIQKTNGGANFVVLRDK 558


>gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
          Length = 534

 Score =  262 bits (669), Expect = 3e-67
 Identities = 165/375 (44%), Positives = 197/375 (52%), Gaps = 1/375 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GY+RWMMK A+NGPAAFGEV++ D  +   G GRGR+
Sbjct: 164  AQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGEVEKFDG-EGASGGGRGRK 222

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K+T D++E N S             K RL LNK                           
Sbjct: 223  KSTGDDDEGNVSDRGDEDEEEEASRKGRLGLNKK-HADDDEEGPRGGDLDFDDDDIEKGD 281

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGNDPEEREDLAPE+PAPP                           
Sbjct: 282  DWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQDDDDEDEDGEEEGGLSKSGKELK 341

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSARX 719
                                       +SPVLAPK K+ PKEEP+DNSP K+  +G+ R 
Sbjct: 342  KLLGRSNGMDDSDAEDDDDDDDDMEDDISPVLAPK-KEAPKEEPIDNSPLKSTTSGAGR- 399

Query: 720  XXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXXXX 899
                            +++K  NGAP KK KTENE K S KD    S K++         
Sbjct: 400  GTPNGSKSKSKRKSNGEESKTTNGAPLKKAKTENEVK-SVKDEIGSSSKSSAPTKGATPP 458

Query: 900  XXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRISK 1079
                         VTE+EIRAVLLQ   VTTQDLV +FK+RLK +EDK AFA IL+RIS+
Sbjct: 459  APSVSASAPPTGPVTEEEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISR 518

Query: 1080 IQKTGGHKYVLLRDK 1124
            IQKT G  +V+LR++
Sbjct: 519  IQKTNGANFVVLRER 533


>gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
          Length = 392

 Score =  262 bits (669), Expect = 3e-67
 Identities = 165/375 (44%), Positives = 197/375 (52%), Gaps = 1/375 (0%)
 Frame = +3

Query: 3    AQYKQLTLEEAEEKMKTRKKNASGYERWMMKVASNGPAAFGEVDRNDDKDNVGGSGRGRR 182
            AQYKQLTLEEAEEKMK R+K A GY+RWMMK A+NGPAAFGEV++ D  +   G GRGR+
Sbjct: 22   AQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPAAFGEVEKFDG-EGASGGGRGRK 80

Query: 183  KATADEEEENAS-XXXXXXXXXXXXKNRLQLNKNXXXXXXXXXXXXXXXXXXXXXXXXXX 359
            K+T D++E N S             K RL LNK                           
Sbjct: 81   KSTGDDDEGNVSDRGDEDEEEEASRKGRLGLNKK-HADDDEEGPRGGDLDFDDDDIEKGD 139

Query: 360  XWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 539
             WEHEEIFTDDDEAVGNDPEEREDLAPE+PAPP                           
Sbjct: 140  DWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQDDDDEDEDGEEEGGLSKSGKELK 199

Query: 540  XXXXXXXXNXXXXXXXXXXXXXXXXISMSPVLAPKQKDEPKEEPVDNSPSKAVPTGSARX 719
                                       +SPVLAPK K+ PKEEP+DNSP K+  +G+ R 
Sbjct: 200  KLLGRSNGMDDSDAEDDDDDDDDMEDDISPVLAPK-KEAPKEEPIDNSPLKSTTSGAGR- 257

Query: 720  XXXXXXXXXXXXXXXXDDAKAANGAPAKKVKTENESKSSSKDGPTPSLKNNPAXXXXXXX 899
                            +++K  NGAP KK KTENE K S KD    S K++         
Sbjct: 258  GTPNGSKSKSKRKSNGEESKTTNGAPLKKAKTENEVK-SVKDEIGSSSKSSAPTKGATPP 316

Query: 900  XXXXXXXXXXXXXVTEDEIRAVLLQVARVTTQDLVGRFKARLKTREDKSAFADILQRISK 1079
                         VTE+EIRAVLLQ   VTTQDLV +FK+RLK +EDK AFA IL+RIS+
Sbjct: 317  APSVSASAPPTGPVTEEEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISR 376

Query: 1080 IQKTGGHKYVLLRDK 1124
            IQKT G  +V+LR++
Sbjct: 377  IQKTNGANFVVLRER 391