BLASTX nr result
ID: Sinomenium21_contig00007152
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00007152
(827 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini... 239 1e-60
ref|XP_007022819.1| RNA-binding family protein, putative isoform... 225 1e-56
ref|XP_007215775.1| hypothetical protein PRUPE_ppa009623mg [Prun... 224 2e-56
ref|XP_007022820.1| RNA-binding family protein, putative isoform... 224 4e-56
ref|XP_006826913.1| hypothetical protein AMTR_s00010p00163740 [A... 218 3e-54
emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera] 216 1e-53
ref|XP_006602008.1| PREDICTED: THO complex subunit 4-like isofor... 214 4e-53
ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like isofor... 214 4e-53
ref|XP_006384155.1| hypothetical protein POPTR_0004s08540g [Popu... 213 5e-53
ref|XP_006372570.1| hypothetical protein POPTR_0017s02890g [Popu... 213 7e-53
ref|XP_004288352.1| PREDICTED: THO complex subunit 4-like [Fraga... 213 9e-53
ref|XP_007163384.1| hypothetical protein PHAVU_001G230200g [Phas... 210 5e-52
ref|XP_006482106.1| PREDICTED: THO complex subunit 4-like isofor... 209 8e-52
ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucum... 209 8e-52
ref|XP_002531919.1| RNA and export factor binding protein, putat... 209 8e-52
ref|XP_006482108.1| PREDICTED: THO complex subunit 4-like isofor... 209 1e-51
ref|XP_006591330.1| PREDICTED: THO complex subunit 4-like isofor... 207 4e-51
ref|XP_003537446.1| PREDICTED: THO complex subunit 4-like isofor... 207 4e-51
ref|NP_001146561.1| hypothetical protein [Zea mays] gi|219887809... 205 1e-50
gb|AFW62224.1| hypothetical protein ZEAMMB73_911092 [Zea mays] g... 204 4e-50
>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
gi|296087136|emb|CBI33510.3| unnamed protein product
[Vitis vinifera]
Length = 269
Score = 239 bits (609), Expect = 1e-60
Identities = 128/203 (63%), Positives = 147/203 (72%), Gaps = 4/203 (1%)
Frame = -3
Query: 822 SRRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYA 643
SRRT+ WQHDLF + L AAG G+E GTKLY+SNLDYGVTNEDI+ELFSEIG +KRYA
Sbjct: 68 SRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEIGDIKRYA 126
Query: 642 VHYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVI 463
VHY++N RPSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEIIG++ MPVSA VNVI
Sbjct: 127 VHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDMPVSARVNVI 186
Query: 462 GGANGRGRRKVVMTPGLGRARGSASL----SXXXXXXXXXXXXXXXXXXXXXXXXXXRWQ 295
GG NG+ RR VVMTPG+G ARGS ++ S R Q
Sbjct: 187 GGVNGKRRRTVVMTPGVGHARGSTAINRSSSRRGRGGLSNGRGRGRAGSRGRGRGRGRKQ 246
Query: 294 PVEKSTGDLDKELESYHAEAMHT 226
PVEKS +LDKEL++YHAEAMHT
Sbjct: 247 PVEKSAVELDKELDNYHAEAMHT 269
>ref|XP_007022819.1| RNA-binding family protein, putative isoform 1 [Theobroma cacao]
gi|508722447|gb|EOY14344.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
Length = 262
Score = 225 bits (574), Expect = 1e-56
Identities = 121/200 (60%), Positives = 139/200 (69%)
Frame = -3
Query: 822 SRRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYA 643
S RTR WQHDLF + L AAG SG+E GTKLYVSNLD GVTNEDI+ELFSEIG LKRYA
Sbjct: 66 SHRTRSTPWQHDLFEDSLRAAGISGVEVGTKLYVSNLDLGVTNEDIRELFSEIGELKRYA 125
Query: 642 VHYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVI 463
VHYD+N RPSGSAEVV+ RR DA AA+KRYNNV LDGK MKIEI+G N +P+SA VNV
Sbjct: 126 VHYDKNGRPSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMKIEIVGANAEVPISARVNVT 185
Query: 462 GGANGRGRRKVVMTPGLGRARGSASLSXXXXXXXXXXXXXXXXXXXXXXXXXXRWQPVEK 283
G NGR +R VV+TPG G++R SA + +P+EK
Sbjct: 186 G-INGRRKRAVVLTPGPGQSRSSAGPNRSLNRRGGMRSGRSGSRGRGRGRGKK--KPIEK 242
Query: 282 STGDLDKELESYHAEAMHTS 223
S DLDKELE+YHAEAM+ S
Sbjct: 243 SADDLDKELENYHAEAMNVS 262
>ref|XP_007215775.1| hypothetical protein PRUPE_ppa009623mg [Prunus persica]
gi|462411925|gb|EMJ16974.1| hypothetical protein
PRUPE_ppa009623mg [Prunus persica]
Length = 284
Score = 224 bits (572), Expect = 2e-56
Identities = 123/208 (59%), Positives = 142/208 (68%), Gaps = 9/208 (4%)
Frame = -3
Query: 822 SRRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYA 643
+RRT+ F WQ DLF + + AAG SGIE GTKLYVSNLDYGVTNEDI+ELFSEIG LKRYA
Sbjct: 78 TRRTKRFPWQPDLFEDSIRAAGISGIEIGTKLYVSNLDYGVTNEDIRELFSEIGELKRYA 137
Query: 642 VHYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVI 463
VH+D+N RPSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEI+G N GMP+SA VNV
Sbjct: 138 VHFDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGANAGMPISARVNVT 197
Query: 462 GGANGRGRRKVVMTPGLGRA---------RGSASLSXXXXXXXXXXXXXXXXXXXXXXXX 310
G +GR +R VVMTPG GR RGS S
Sbjct: 198 G-VHGRKKRTVVMTPGPGRGGGYALPMVNRGSGRSSRGGIRNGRGQPRGSGSGRGRGRSG 256
Query: 309 XXRWQPVEKSTGDLDKELESYHAEAMHT 226
R +PV+KS +LDKEL+SYHA+AM +
Sbjct: 257 PGRKKPVDKSVDELDKELDSYHADAMQS 284
>ref|XP_007022820.1| RNA-binding family protein, putative isoform 2, partial [Theobroma
cacao] gi|508722448|gb|EOY14345.1| RNA-binding family
protein, putative isoform 2, partial [Theobroma cacao]
Length = 219
Score = 224 bits (570), Expect = 4e-56
Identities = 120/198 (60%), Positives = 138/198 (69%)
Frame = -3
Query: 816 RTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAVH 637
RTR WQHDLF + L AAG SG+E GTKLYVSNLD GVTNEDI+ELFSEIG LKRYAVH
Sbjct: 25 RTRSTPWQHDLFEDSLRAAGISGVEVGTKLYVSNLDLGVTNEDIRELFSEIGELKRYAVH 84
Query: 636 YDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIGG 457
YD+N RPSGSAEVV+ RR DA AA+KRYNNV LDGK MKIEI+G N +P+SA VNV G
Sbjct: 85 YDKNGRPSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMKIEIVGANAEVPISARVNVTG- 143
Query: 456 ANGRGRRKVVMTPGLGRARGSASLSXXXXXXXXXXXXXXXXXXXXXXXXXXRWQPVEKST 277
NGR +R VV+TPG G++R SA + +P+EKS
Sbjct: 144 INGRRKRAVVLTPGPGQSRSSAGPNRSLNRRGGMRSGRSGSRGRGRGRGKK--KPIEKSA 201
Query: 276 GDLDKELESYHAEAMHTS 223
DLDKELE+YHAEAM+ S
Sbjct: 202 DDLDKELENYHAEAMNVS 219
>ref|XP_006826913.1| hypothetical protein AMTR_s00010p00163740 [Amborella trichopoda]
gi|548831342|gb|ERM94150.1| hypothetical protein
AMTR_s00010p00163740 [Amborella trichopoda]
Length = 269
Score = 218 bits (554), Expect = 3e-54
Identities = 120/203 (59%), Positives = 138/203 (67%), Gaps = 9/203 (4%)
Frame = -3
Query: 816 RTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAVH 637
RT+D WQHD+F + ++AAG +GIE+GTKLY+SNLDYGV+NEDI+ELFSEIG +KR AVH
Sbjct: 67 RTKDMIWQHDMFEDSMIAAGLTGIESGTKLYISNLDYGVSNEDIRELFSEIGPIKRCAVH 126
Query: 636 YDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIGG 457
YDR+ R SGSAEVVFT+R +ALAA+KRYNNVQLDGK MKIE+IGTNLGMPVSA VNV GG
Sbjct: 127 YDRSGRSSGSAEVVFTKRSNALAAVKRYNNVQLDGKPMKIELIGTNLGMPVSARVNVTGG 186
Query: 456 ANGRGRRKVVMTPGLGRARGSASLSXXXXXXXXXXXXXXXXXXXXXXXXXXRWQ------ 295
A GRGRR VVMTP G G S R +
Sbjct: 187 A-GRGRRTVVMTPEFGPMPGVVSGGHGTRWGRGRGGFRRGGRGGRGRGVGGRGRGRGRGR 245
Query: 294 ---PVEKSTGDLDKELESYHAEA 235
P KS +LDKELESYHA A
Sbjct: 246 NQAPPPKSADELDKELESYHANA 268
>emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]
Length = 348
Score = 216 bits (549), Expect = 1e-53
Identities = 107/147 (72%), Positives = 124/147 (84%)
Frame = -3
Query: 822 SRRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYA 643
SRRT+ WQHDLF + L AAG G+E GTKLY+SNLDYGVTNEDI+ELFSEIG +KRYA
Sbjct: 97 SRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEIGDIKRYA 155
Query: 642 VHYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVI 463
VHY++N RPSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEIIG++ MPVSA VNVI
Sbjct: 156 VHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDMPVSARVNVI 215
Query: 462 GGANGRGRRKVVMTPGLGRARGSASLS 382
GG NG+ RR VVMTPG+G ARGS +++
Sbjct: 216 GGVNGKRRRTVVMTPGVGHARGSTAIN 242
>ref|XP_006602008.1| PREDICTED: THO complex subunit 4-like isoform X2 [Glycine max]
Length = 273
Score = 214 bits (544), Expect = 4e-53
Identities = 119/213 (55%), Positives = 136/213 (63%), Gaps = 14/213 (6%)
Frame = -3
Query: 819 RRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAV 640
RR R F WQHDLF + L AAG G+E GTKLYVSNLD+GVTNEDI+ELFSE+G LKR+AV
Sbjct: 62 RRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRFAV 121
Query: 639 HYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIG 460
HYD+N PSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEI+G+N +P+SA VNV G
Sbjct: 122 HYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNVTG 181
Query: 459 GANGRGRRKVVMTP--------------GLGRARGSASLSXXXXXXXXXXXXXXXXXXXX 322
NGR +R VVMTP G GR R S
Sbjct: 182 -VNGRRKRTVVMTPRGGQAGGGPTMPNRGAGRGRRGGPRSGSGRGGGGGRGRGRGSRGGG 240
Query: 321 XXXXXXRWQPVEKSTGDLDKELESYHAEAMHTS 223
R VEKS +LDKELE+YHAEAM+ S
Sbjct: 241 GGRGRGRKDAVEKSAEELDKELETYHAEAMNIS 273
>ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
Length = 298
Score = 214 bits (544), Expect = 4e-53
Identities = 119/213 (55%), Positives = 136/213 (63%), Gaps = 14/213 (6%)
Frame = -3
Query: 819 RRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAV 640
RR R F WQHDLF + L AAG G+E GTKLYVSNLD+GVTNEDI+ELFSE+G LKR+AV
Sbjct: 87 RRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRFAV 146
Query: 639 HYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIG 460
HYD+N PSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEI+G+N +P+SA VNV G
Sbjct: 147 HYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNVTG 206
Query: 459 GANGRGRRKVVMTP--------------GLGRARGSASLSXXXXXXXXXXXXXXXXXXXX 322
NGR +R VVMTP G GR R S
Sbjct: 207 -VNGRRKRTVVMTPRGGQAGGGPTMPNRGAGRGRRGGPRSGSGRGGGGGRGRGRGSRGGG 265
Query: 321 XXXXXXRWQPVEKSTGDLDKELESYHAEAMHTS 223
R VEKS +LDKELE+YHAEAM+ S
Sbjct: 266 GGRGRGRKDAVEKSAEELDKELETYHAEAMNIS 298
>ref|XP_006384155.1| hypothetical protein POPTR_0004s08540g [Populus trichocarpa]
gi|550340608|gb|ERP61952.1| hypothetical protein
POPTR_0004s08540g [Populus trichocarpa]
Length = 274
Score = 213 bits (543), Expect = 5e-53
Identities = 116/210 (55%), Positives = 137/210 (65%), Gaps = 10/210 (4%)
Frame = -3
Query: 825 PSRRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRY 646
PSRR R WQHDL + + AAG +G+E GTKLYVSNLDYGVTNEDI+ELF+EIG LKR+
Sbjct: 66 PSRRIRSLPWQHDLLEDSIRAAGITGLEVGTKLYVSNLDYGVTNEDIRELFAEIGDLKRF 125
Query: 645 AVHYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNV 466
AVHYD+N R +GSAEV++TRR DA +A+K+YNNV LDG+ MKIEI+G N +P+SA VNV
Sbjct: 126 AVHYDKNGRSTGSAEVMYTRRSDAFSALKKYNNVLLDGRPMKIEIVGANPEVPISARVNV 185
Query: 465 IGGANGRGRRKVVMTPGLGRARG----------SASLSXXXXXXXXXXXXXXXXXXXXXX 316
GANG+ +R VVM PG GR RG S
Sbjct: 186 T-GANGKKKRTVVMMPGPGRGRGGVVNNHGSGQSRRGGGGPRNGMRNGRGRGRAQGQGRG 244
Query: 315 XXXXRWQPVEKSTGDLDKELESYHAEAMHT 226
+ QP EKS DLDKELESYHAEAM T
Sbjct: 245 RGRGKKQPAEKSVDDLDKELESYHAEAMQT 274
>ref|XP_006372570.1| hypothetical protein POPTR_0017s02890g [Populus trichocarpa]
gi|566210995|ref|XP_006372571.1| hypothetical protein
POPTR_0017s02890g [Populus trichocarpa]
gi|550319199|gb|ERP50367.1| hypothetical protein
POPTR_0017s02890g [Populus trichocarpa]
gi|550319200|gb|ERP50368.1| hypothetical protein
POPTR_0017s02890g [Populus trichocarpa]
Length = 284
Score = 213 bits (542), Expect = 7e-53
Identities = 117/218 (53%), Positives = 140/218 (64%), Gaps = 18/218 (8%)
Frame = -3
Query: 825 PSRRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRY 646
PSRR R WQHDL + + AAG +G+E GTKLYVSNLDYGVTNEDI+ELF+E+G LKRY
Sbjct: 68 PSRRVRSLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLDYGVTNEDIRELFAEVGDLKRY 127
Query: 645 AVHYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNV 466
AVHYD++ R SGSAEV++TRR DA AA+K+YNNV LDGK MKIEI+G N +P+SA +NV
Sbjct: 128 AVHYDKDGRSSGSAEVMYTRRSDAFAALKKYNNVLLDGKPMKIEIVGPNPVVPISARMNV 187
Query: 465 IGGANGRGRRKVVMTPGLGRARGSASLSXXXXXXXXXXXXXXXXXXXXXXXXXXRW---- 298
GANG+ +R VV TPGLG RG+ + + R
Sbjct: 188 T-GANGKKKRTVVTTPGLGGGRGAGANNRGSGQSRRGGGDLRNGTRNGRGQAPGRGQAPG 246
Query: 297 --------------QPVEKSTGDLDKELESYHAEAMHT 226
QPVEKS +LDKELESYHAEAM T
Sbjct: 247 RGQAPGRGRGRGKKQPVEKSVDELDKELESYHAEAMQT 284
>ref|XP_004288352.1| PREDICTED: THO complex subunit 4-like [Fragaria vesca subsp. vesca]
Length = 283
Score = 213 bits (541), Expect = 9e-53
Identities = 120/213 (56%), Positives = 137/213 (64%), Gaps = 15/213 (7%)
Frame = -3
Query: 819 RRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAV 640
RRT+ F WQ DLF E L AAG SGIE GTKLYVSNL YGVTNEDI+ELFSEIG LKRYAV
Sbjct: 72 RRTKHFPWQPDLFEESLRAAGISGIEIGTKLYVSNLHYGVTNEDIRELFSEIGELKRYAV 131
Query: 639 HYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIG 460
H+D+N RPSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEI+G N GMP+SA VNV
Sbjct: 132 HFDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGVNEGMPISARVNVT- 190
Query: 459 GANGRGRRKVVMTP---------------GLGRARGSASLSXXXXXXXXXXXXXXXXXXX 325
G GR +R VVMTP G G +R +
Sbjct: 191 GVQGRKKRTVVMTPRPAHAGGYALPAVNRGPGPSRSTHGGIRNGRGISRGRGRGRGRGRG 250
Query: 324 XXXXXXXRWQPVEKSTGDLDKELESYHAEAMHT 226
+ +PV+KS +LDKEL++YHAEAM T
Sbjct: 251 RGQGSEWKKKPVDKSVDELDKELDTYHAEAMQT 283
>ref|XP_007163384.1| hypothetical protein PHAVU_001G230200g [Phaseolus vulgaris]
gi|561036848|gb|ESW35378.1| hypothetical protein
PHAVU_001G230200g [Phaseolus vulgaris]
Length = 302
Score = 210 bits (535), Expect = 5e-52
Identities = 120/216 (55%), Positives = 140/216 (64%), Gaps = 17/216 (7%)
Frame = -3
Query: 819 RRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAV 640
RRTR F WQHDLF + L AAG G+E GTKLYVSNLD+GVTNEDI+ELFSE+G LKRYAV
Sbjct: 88 RRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRYAV 147
Query: 639 HYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIG 460
HYD+N PSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEI+G+N +P+SA VNV
Sbjct: 148 HYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNGELPISARVNVT- 206
Query: 459 GANGRGRRKVVMTP---------------GLGRARGSASLSXXXXXXXXXXXXXXXXXXX 325
G NGR +R VVMTP G GR G+ S +
Sbjct: 207 GVNGRRKRTVVMTPRGGQAGVPAIRNRGAGWGRRGGTRSGNGQGRGGGGRGRGNARGGNT 266
Query: 324 XXXXXXXRWQ--PVEKSTGDLDKELESYHAEAMHTS 223
R + VEKS +LDKEL++YHAEAM+ S
Sbjct: 267 GRGGGRGRGRKDTVEKSAEELDKELDTYHAEAMNIS 302
>ref|XP_006482106.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
gi|568857100|ref|XP_006482107.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Citrus sinensis]
Length = 291
Score = 209 bits (533), Expect = 8e-52
Identities = 117/220 (53%), Positives = 139/220 (63%), Gaps = 24/220 (10%)
Frame = -3
Query: 819 RRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAV 640
RRTR+F WQHDLF + L AAG SGIE GTKLYVSNL GVTN+DI+ELFSEIG LKRYA+
Sbjct: 71 RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI 130
Query: 639 HYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIG 460
H+D+N RPSGSAEVV+ RR DA AA+KRYNNV LDGK MKIE++GTN +P+ A VNV
Sbjct: 131 HFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVT- 189
Query: 459 GANGRGRRKVVMTPGLGRARGSASLSXXXXXXXXXXXXXXXXXXXXXXXXXXRWQ----- 295
G NGR +R VVMT G G A G+A+++ R +
Sbjct: 190 GVNGRRKRTVVMTSGSGNAGGAAAINHGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGG 249
Query: 294 -------------------PVEKSTGDLDKELESYHAEAM 232
PV+KS DLDKEL++YHAEAM
Sbjct: 250 GGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAM 289
>ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucumis sativus]
Length = 286
Score = 209 bits (533), Expect = 8e-52
Identities = 118/221 (53%), Positives = 138/221 (62%), Gaps = 21/221 (9%)
Frame = -3
Query: 825 PSRRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRY 646
P R ++ WQHDLF + L A+G SGI+ GTKLYVSNLDYGVT EDIKELFSEIG +KR+
Sbjct: 67 PPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELFSEIGDVKRF 126
Query: 645 AVHYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNV 466
A+HYD+N RPSGSAEVV+TRR DA AA+KRYNNV LDGK MKIE++G N MPVSA +NV
Sbjct: 127 AIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAEMPVSARINV 186
Query: 465 IGGANGRGRRKVVMTP---------------------GLGRARGSASLSXXXXXXXXXXX 349
G NGR RR VV+T GL ARG +
Sbjct: 187 T-GTNGRNRRTVVLTSESGRNATSNVVNSFPGPSHRGGLRNARGRGRGAWSRGVGLGGGS 245
Query: 348 XXXXXXXXXXXXXXXRWQPVEKSTGDLDKELESYHAEAMHT 226
R +PVEKS+ +LDKELE+YHAEAM T
Sbjct: 246 GGGRGRGRGRGRGQGRKKPVEKSSDELDKELENYHAEAMQT 286
>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223528429|gb|EEF30463.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 268
Score = 209 bits (533), Expect = 8e-52
Identities = 112/205 (54%), Positives = 137/205 (66%), Gaps = 5/205 (2%)
Frame = -3
Query: 825 PSRRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRY 646
P+RR R+ WQHDL + + AAG +G+E GTKLYVSNL+YGV+NEDI+ELF+EIG LKRY
Sbjct: 65 PNRRIRNLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVSNEDIRELFAEIGDLKRY 124
Query: 645 AVHYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNV 466
AVHYD+N R +GSAEVV+TRR +A AA+K+YNNV LDGK MKIEI+G P+SA VNV
Sbjct: 125 AVHYDKNGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKIEIVGVTGEAPISARVNV 184
Query: 465 IGGANGRGRRKVVMTPGLGRARGSASLSXXXXXXXXXXXXXXXXXXXXXXXXXXRW---- 298
G NGR +R VVMTPG GR RG A +
Sbjct: 185 T-GINGRRKRTVVMTPGPGRGRGFAPSNRGAGQRSRGGLRNLGRGRGRGRGRGGHGGRGK 243
Query: 297 -QPVEKSTGDLDKELESYHAEAMHT 226
QP+EKS +LDKEL++YHAEAM +
Sbjct: 244 KQPLEKSADELDKELDTYHAEAMQS 268
>ref|XP_006482108.1| PREDICTED: THO complex subunit 4-like isoform X3 [Citrus sinensis]
Length = 290
Score = 209 bits (532), Expect = 1e-51
Identities = 116/219 (52%), Positives = 138/219 (63%), Gaps = 23/219 (10%)
Frame = -3
Query: 819 RRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAV 640
RRTR+F WQHDLF + L AAG SGIE GTKLYVSNL GVTN+DI+ELFSEIG LKRYA+
Sbjct: 71 RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI 130
Query: 639 HYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIG 460
H+D+N RPSGSAEVV+ RR DA AA+KRYNNV LDGK MKIE++GTN +P+ A VNV
Sbjct: 131 HFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVT- 189
Query: 459 GANGRGRRKVVMTPGLGRARGSASLS-----------------------XXXXXXXXXXX 349
G NGR +R VVMT G G A G+A+++
Sbjct: 190 GVNGRRKRTVVMTSGSGNAGGAAAINHGPGQGRRGGLRRSSQGRGRGQGQGRGRGRGGGG 249
Query: 348 XXXXXXXXXXXXXXXRWQPVEKSTGDLDKELESYHAEAM 232
+ PV+KS DLDKEL++YHAEAM
Sbjct: 250 GGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAM 288
>ref|XP_006591330.1| PREDICTED: THO complex subunit 4-like isoform X2 [Glycine max]
Length = 216
Score = 207 bits (527), Expect = 4e-51
Identities = 116/212 (54%), Positives = 136/212 (64%), Gaps = 13/212 (6%)
Frame = -3
Query: 819 RRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAV 640
RR R F WQHDLF + L AAG G+E GTKLYVSNLD+GVTNEDI+ELFSE+G LKR+AV
Sbjct: 6 RRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRFAV 65
Query: 639 HYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIG 460
HYD+N PSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEI+G+N +P+SA VNV
Sbjct: 66 HYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNVT- 124
Query: 459 GANGRGRRKVVMTPGLGRARGSASL-------------SXXXXXXXXXXXXXXXXXXXXX 319
G NGR +R VVMT G+A G ++
Sbjct: 125 GVNGRRKRTVVMTSRGGQAGGGPAMPTRGAGWGRRGGPRSGSGRGGAGGRGRGRGRGGAG 184
Query: 318 XXXXXRWQPVEKSTGDLDKELESYHAEAMHTS 223
R VEKS +LDKELE+YHAEAM+ S
Sbjct: 185 GRGRGRKDAVEKSAEELDKELETYHAEAMNIS 216
>ref|XP_003537446.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
Length = 298
Score = 207 bits (527), Expect = 4e-51
Identities = 116/212 (54%), Positives = 136/212 (64%), Gaps = 13/212 (6%)
Frame = -3
Query: 819 RRTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAV 640
RR R F WQHDLF + L AAG G+E GTKLYVSNLD+GVTNEDI+ELFSE+G LKR+AV
Sbjct: 88 RRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRFAV 147
Query: 639 HYDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIG 460
HYD+N PSGSAEVV+TRR DA AA+KRYNNV LDGK MKIEI+G+N +P+SA VNV
Sbjct: 148 HYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNVT- 206
Query: 459 GANGRGRRKVVMTPGLGRARGSASL-------------SXXXXXXXXXXXXXXXXXXXXX 319
G NGR +R VVMT G+A G ++
Sbjct: 207 GVNGRRKRTVVMTSRGGQAGGGPAMPTRGAGWGRRGGPRSGSGRGGAGGRGRGRGRGGAG 266
Query: 318 XXXXXRWQPVEKSTGDLDKELESYHAEAMHTS 223
R VEKS +LDKELE+YHAEAM+ S
Sbjct: 267 GRGRGRKDAVEKSAEELDKELETYHAEAMNIS 298
>ref|NP_001146561.1| hypothetical protein [Zea mays] gi|219887809|gb|ACL54279.1| unknown
[Zea mays] gi|413922291|gb|AFW62223.1| hypothetical
protein ZEAMMB73_911092 [Zea mays]
Length = 269
Score = 205 bits (522), Expect = 1e-50
Identities = 115/216 (53%), Positives = 141/216 (65%), Gaps = 19/216 (8%)
Frame = -3
Query: 816 RTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAVH 637
RT+D TW+ DLF + + A SGIETGTKLY+SNLDYGV+NEDIKELFSE+G LKR+AVH
Sbjct: 56 RTKDMTWRPDLFSDSMAA---SGIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVH 112
Query: 636 YDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIGG 457
YD RP+G+AEVVFTRR DA+AA+KRYNNV LDGKAMKIE+IG +LG+P++ +NV+G
Sbjct: 113 YDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGNDLGLPMTPRINVVGA 172
Query: 456 ANGRGRRKVVMTPGLG-RARGSAS--LSXXXXXXXXXXXXXXXXXXXXXXXXXXRWQ--- 295
+NGR R VVMTP R RGS+S LS ++Q
Sbjct: 173 SNGRATRTVVMTPEFSQRGRGSSSRPLSNRFNNRGGFQAGRGRGQFQSWGRGRGQFQSRG 232
Query: 294 -------------PVEKSTGDLDKELESYHAEAMHT 226
EK+ +LDK+LESYHAEAM T
Sbjct: 233 RGRAQFQGRGRGRKPEKTADELDKDLESYHAEAMKT 268
>gb|AFW62224.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
gi|413922293|gb|AFW62225.1| hypothetical protein
ZEAMMB73_911092 [Zea mays]
Length = 272
Score = 204 bits (518), Expect = 4e-50
Identities = 112/220 (50%), Positives = 137/220 (62%), Gaps = 23/220 (10%)
Frame = -3
Query: 816 RTRDFTWQHDLFGEGLVAAGYSGIETGTKLYVSNLDYGVTNEDIKELFSEIGVLKRYAVH 637
RT+D TW+ DLF + + A SGIETGTKLY+SNLDYGV+NEDIKELFSE+G LKR+AVH
Sbjct: 56 RTKDMTWRPDLFSDSMAA---SGIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVH 112
Query: 636 YDRNARPSGSAEVVFTRRDDALAAMKRYNNVQLDGKAMKIEIIGTNLGMPVSALVNVIGG 457
YD RP+G+AEVVFTRR DA+AA+KRYNNV LDGKAMKIE+IG +LG+P++ +NV+G
Sbjct: 113 YDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGNDLGLPMTPRINVVGA 172
Query: 456 ANGRGRRKVVMTPGLGRARGSASLSXXXXXXXXXXXXXXXXXXXXXXXXXXRW------- 298
+NGR R VVMTP + RG S S W
Sbjct: 173 SNGRATRTVVMTPEFSQ-RGRGSSSRPLSNPSNRFNNRGGFQAGRGRGQFQSWGRGRGQF 231
Query: 297 ----------------QPVEKSTGDLDKELESYHAEAMHT 226
+ EK+ +LDK+LESYHAEAM T
Sbjct: 232 QSRGRGRAQFQGRGRGRKPEKTADELDKDLESYHAEAMKT 271