BLASTX nr result
ID: Sinomenium21_contig00006676
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00006676
(445 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 99 6e-19
ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [M... 89 1e-18
ref|XP_002302501.2| hypothetical protein POPTR_0002s14050g [Popu... 92 7e-17
ref|XP_007052382.1| RNA-binding family protein isoform 2 [Theobr... 91 1e-16
ref|XP_007052381.1| RNA-binding family protein isoform 1 [Theobr... 91 1e-16
ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citr... 91 2e-16
ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sine... 91 2e-16
ref|XP_006375182.1| hypothetical protein POPTR_0014s05040g [Popu... 91 2e-16
ref|XP_003520415.1| PREDICTED: nucleolin-like isoform X1 [Glycin... 91 2e-16
ref|XP_007134398.1| hypothetical protein PHAVU_010G044700g [Phas... 90 3e-16
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 89 5e-16
ref|XP_004515317.1| PREDICTED: nucleolin-like isoform X1 [Cicer ... 89 8e-16
ref|XP_006583510.1| PREDICTED: nucleolin-like isoform X1 [Glycin... 88 1e-15
ref|XP_006338915.1| PREDICTED: nucleolin-like isoform X5 [Solanu... 87 2e-15
ref|XP_004307249.1| PREDICTED: uncharacterized protein LOC101302... 87 2e-15
ref|XP_006338909.1| PREDICTED: nucleolin-like isoform X3 [Solanu... 85 9e-15
ref|XP_004248987.1| PREDICTED: uncharacterized protein LOC101258... 85 9e-15
ref|XP_004248986.1| PREDICTED: uncharacterized protein LOC101258... 85 9e-15
gb|EXB38373.1| Heterogeneous nuclear ribonucleoprotein Q [Morus ... 85 1e-14
ref|XP_004492906.1| PREDICTED: nucleolin-like [Cicer arietinum] 84 3e-14
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/61 (73%), Positives = 55/61 (90%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
L+DVPPRYA+AS+RQSRARLDY + A +SQY D Y DRLGRS+LGYGGSRSS+S+Q+SHG
Sbjct: 685 LDDVPPRYADASVRQSRARLDYEMSAGASQYGDAYGDRLGRSNLGYGGSRSSMSSQDSHG 744
Query: 181 V 183
+
Sbjct: 745 L 745
>ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
gi|355502103|gb|AES83306.1| Heterogeneous nuclear
ribonucleoprotein Q [Medicago truncatula]
Length = 824
Score = 89.0 bits (219), Expect(2) = 1e-18
Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYG-GSRSSLSAQESH 177
++DVPPRYA+ RQSRARL+Y G S+SQY D Y DR+GRS LGYG GSRSS+S Q+SH
Sbjct: 671 VDDVPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRSSISGQDSH 730
Query: 178 GV 183
GV
Sbjct: 731 GV 732
Score = 29.6 bits (65), Expect(2) = 1e-18
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +2
Query: 239 LGGCTLQATVVITCLVALMWATAPIPLCI 325
L CT Q VIT LV +M A A I LCI
Sbjct: 764 LEACTHQVMAVITFLVEMMLAAAHIHLCI 792
>ref|XP_002302501.2| hypothetical protein POPTR_0002s14050g [Populus trichocarpa]
gi|550344986|gb|EEE81774.2| hypothetical protein
POPTR_0002s14050g [Populus trichocarpa]
Length = 784
Score = 92.0 bits (227), Expect = 7e-17
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
++D+PPRYA+A +R SR RLDY +G+S+SQY D Y DRLGRS GYGGSRSS+S+Q+SHG
Sbjct: 662 MDDIPPRYADAGVRHSRPRLDYELGSSASQYGDAYGDRLGRSAAGYGGSRSSISSQDSHG 721
Query: 181 V 183
+
Sbjct: 722 M 722
>ref|XP_007052382.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508704643|gb|EOX96539.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 802
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
++DVPPRYA+A R SRARLDY + + YADTY DRLGRS LGYGGSRSS+S+Q+SHG
Sbjct: 679 MDDVPPRYADAGARHSRARLDYELATGAPPYADTYGDRLGRSSLGYGGSRSSMSSQDSHG 738
Query: 181 V 183
+
Sbjct: 739 L 739
>ref|XP_007052381.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590724146|ref|XP_007052383.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508704642|gb|EOX96538.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508704644|gb|EOX96540.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 808
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
++DVPPRYA+A R SRARLDY + + YADTY DRLGRS LGYGGSRSS+S+Q+SHG
Sbjct: 679 MDDVPPRYADAGARHSRARLDYELATGAPPYADTYGDRLGRSSLGYGGSRSSMSSQDSHG 738
Query: 181 V 183
+
Sbjct: 739 L 739
>ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citrus clementina]
gi|567905934|ref|XP_006445455.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819727|ref|XP_006464397.1| PREDICTED: nucleolin
isoform X1 [Citrus sinensis]
gi|568819729|ref|XP_006464398.1| PREDICTED: nucleolin
isoform X2 [Citrus sinensis]
gi|568819731|ref|XP_006464399.1| PREDICTED: nucleolin
isoform X3 [Citrus sinensis] gi|557547716|gb|ESR58694.1|
hypothetical protein CICLE_v10018944mg [Citrus
clementina] gi|557547717|gb|ESR58695.1| hypothetical
protein CICLE_v10018944mg [Citrus clementina]
Length = 776
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
++DVPPRYA+ +R SRARLDY +G + QY D Y DR+GRS+LGYGGSRSS+S+Q+SHG
Sbjct: 649 VDDVPPRYADPGVRHSRARLDYDLGGGAPQYGDAYGDRMGRSNLGYGGSRSSISSQDSHG 708
Query: 181 V 183
+
Sbjct: 709 L 709
>ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sinensis]
gi|567905936|ref|XP_006445456.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819733|ref|XP_006464400.1| PREDICTED: nucleolin
isoform X4 [Citrus sinensis] gi|359386142|gb|AEV43360.1|
RNA recognition motif protein 1 [Citrus sinensis]
gi|557547718|gb|ESR58696.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
Length = 775
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
++DVPPRYA+ +R SRARLDY +G + QY D Y DR+GRS+LGYGGSRSS+S+Q+SHG
Sbjct: 649 VDDVPPRYADPGVRHSRARLDYDLGGGAPQYGDAYGDRMGRSNLGYGGSRSSISSQDSHG 708
Query: 181 V 183
+
Sbjct: 709 L 709
>ref|XP_006375182.1| hypothetical protein POPTR_0014s05040g [Populus trichocarpa]
gi|550323501|gb|ERP52979.1| hypothetical protein
POPTR_0014s05040g [Populus trichocarpa]
Length = 785
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/61 (63%), Positives = 52/61 (85%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
++D+PPRYA+A R SR RLDY +G+ +SQY D YSDRLGRS +GYGGSR+S+S+Q+SHG
Sbjct: 665 IDDIPPRYADAGARHSRPRLDYELGSRASQYGDAYSDRLGRSAVGYGGSRNSISSQDSHG 724
Query: 181 V 183
+
Sbjct: 725 M 725
>ref|XP_003520415.1| PREDICTED: nucleolin-like isoform X1 [Glycine max]
gi|571445111|ref|XP_006576704.1| PREDICTED:
nucleolin-like isoform X2 [Glycine max]
Length = 816
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/62 (67%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGY-GGSRSSLSAQESH 177
++DVPPRYA+ RQSRARLDY G S+SQY D Y DRLGRS +GY GGSRSS+S+Q+SH
Sbjct: 687 IDDVPPRYADTGARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGGGSRSSISSQDSH 746
Query: 178 GV 183
G+
Sbjct: 747 GL 748
>ref|XP_007134398.1| hypothetical protein PHAVU_010G044700g [Phaseolus vulgaris]
gi|593264442|ref|XP_007134399.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|593264444|ref|XP_007134400.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|561007443|gb|ESW06392.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|561007444|gb|ESW06393.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|561007445|gb|ESW06394.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
Length = 818
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGG-SRSSLSAQESH 177
++DVPPRYA+ RQSRARLDY G S+SQY D Y DRLGRS +GYGG SRSS+S Q+SH
Sbjct: 690 IDDVPPRYADTGARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGGSSRSSMSGQDSH 749
Query: 178 GV 183
G+
Sbjct: 750 GM 751
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein,
putative [Ricinus communis]
Length = 784
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/63 (66%), Positives = 52/63 (82%), Gaps = 2/63 (3%)
Frame = +1
Query: 1 LEDVPPRYAE--ASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQES 174
++DVPPRYA+ A R SRARLDY +G S+SQY D Y DR+GRS +GYGGSRSSLS+Q+S
Sbjct: 656 MDDVPPRYADGGAGTRHSRARLDYELGPSASQYGDAYGDRIGRSSVGYGGSRSSLSSQDS 715
Query: 175 HGV 183
HG+
Sbjct: 716 HGL 718
>ref|XP_004515317.1| PREDICTED: nucleolin-like isoform X1 [Cicer arietinum]
gi|502173391|ref|XP_004515318.1| PREDICTED:
nucleolin-like isoform X2 [Cicer arietinum]
Length = 799
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/62 (66%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGY-GGSRSSLSAQESH 177
++DVPPRYA+ RQSRARL+Y G ++SQY D+YSDR+GRS LGY GGSRSS+S Q+SH
Sbjct: 670 VDDVPPRYADTGARQSRARLEYDYGGNASQYGDSYSDRVGRSSLGYGGGSRSSISGQDSH 729
Query: 178 GV 183
G+
Sbjct: 730 GM 731
>ref|XP_006583510.1| PREDICTED: nucleolin-like isoform X1 [Glycine max]
gi|571465910|ref|XP_006583511.1| PREDICTED:
nucleolin-like isoform X2 [Glycine max]
Length = 819
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/62 (66%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGY-GGSRSSLSAQESH 177
++D+PPRYA+ RQSRARLDY G S+SQY D Y DRLGRS +GY GGSRSS+S+Q+SH
Sbjct: 690 IDDLPPRYADTGARQSRARLDYDYGDSASQYGDAYGDRLGRSSVGYGGGSRSSISSQDSH 749
Query: 178 GV 183
G+
Sbjct: 750 GM 751
>ref|XP_006338915.1| PREDICTED: nucleolin-like isoform X5 [Solanum tuberosum]
Length = 773
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/62 (67%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASS-SQYADTYSDRLGRSDLGYGGSRSSLSAQESH 177
++DV PRYAEA +R SRARLDY +G+ S S Y D Y+DRLGRS+LGYGGSR SLS Q+SH
Sbjct: 650 VDDVHPRYAEAGVRHSRARLDYELGSGSGSHYGDAYADRLGRSNLGYGGSRGSLSGQDSH 709
Query: 178 GV 183
G+
Sbjct: 710 GM 711
>ref|XP_004307249.1| PREDICTED: uncharacterized protein LOC101302396 [Fragaria vesca
subsp. vesca]
Length = 801
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
L+DVPPRYA+A +RQSRARLDY G+ SSQY D YSDR+GRS LGYG SR+S Q+SHG
Sbjct: 677 LDDVPPRYADAGIRQSRARLDYEYGSGSSQYGDGYSDRVGRSSLGYGSSRTS---QDSHG 733
Query: 181 V 183
+
Sbjct: 734 L 734
>ref|XP_006338909.1| PREDICTED: nucleolin-like isoform X3 [Solanum tuberosum]
gi|565343584|ref|XP_006338910.1| PREDICTED:
nucleolin-like isoform X4 [Solanum tuberosum]
Length = 785
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASS-SQYADTYSDRLGRSDLGYGGSRSSLSAQESH 177
++DV P YAEA +R SRARLDY +G+ S S Y D Y DRLGRS+LGYGG+RSS+S Q+SH
Sbjct: 661 VDDVHPHYAEAGMRHSRARLDYELGSGSGSHYGDAYGDRLGRSNLGYGGNRSSISRQDSH 720
Query: 178 GV 183
G+
Sbjct: 721 GI 722
>ref|XP_004248987.1| PREDICTED: uncharacterized protein LOC101258799 isoform 2 [Solanum
lycopersicum]
Length = 767
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 4 EDVPPRYAEASLRQSRARLDYGVGASS-SQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
+DV PRYAEA ++ SRARLDY +G+ S S Y D+Y DRLGRS+LGYGGSR SLS Q+SHG
Sbjct: 645 DDVHPRYAEAGVQHSRARLDYELGSGSGSHYGDSYGDRLGRSNLGYGGSRGSLSGQDSHG 704
Query: 181 V 183
+
Sbjct: 705 M 705
>ref|XP_004248986.1| PREDICTED: uncharacterized protein LOC101258799 isoform 1 [Solanum
lycopersicum]
Length = 793
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +1
Query: 4 EDVPPRYAEASLRQSRARLDYGVGASS-SQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
+DV PRYAEA ++ SRARLDY +G+ S S Y D+Y DRLGRS+LGYGGSR SLS Q+SHG
Sbjct: 671 DDVHPRYAEAGVQHSRARLDYELGSGSGSHYGDSYGDRLGRSNLGYGGSRGSLSGQDSHG 730
Query: 181 V 183
+
Sbjct: 731 M 731
>gb|EXB38373.1| Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis]
Length = 791
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +1
Query: 1 LEDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESHG 180
++DVPPRYA+AS+RQSRARLDY G+ S Y D Y DRLGRS+LGYG SR+S Q+SHG
Sbjct: 667 MDDVPPRYADASVRQSRARLDYEYGSGGSHYGDAYGDRLGRSNLGYGSSRTS---QDSHG 723
Query: 181 V 183
+
Sbjct: 724 L 724
>ref|XP_004492906.1| PREDICTED: nucleolin-like [Cicer arietinum]
Length = 791
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/58 (65%), Positives = 46/58 (79%)
Frame = +1
Query: 4 EDVPPRYAEASLRQSRARLDYGVGASSSQYADTYSDRLGRSDLGYGGSRSSLSAQESH 177
+D+ PRYA+AS RQSR+RLDY G S+S+Y + Y DRLGRS LGY GSRSS+S Q SH
Sbjct: 663 DDISPRYADASARQSRSRLDYDYGGSASKYKEAYGDRLGRSSLGYSGSRSSISIQNSH 720