BLASTX nr result
ID: Sinomenium21_contig00006494
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00006494
(730 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248... 71 3e-10
gb|EYU26340.1| hypothetical protein MIMGU_mgv1a024658mg [Mimulus... 70 1e-09
gb|EPS74427.1| hypothetical protein M569_00327 [Genlisea aurea] 70 1e-09
ref|XP_006358946.1| PREDICTED: heterogeneous nuclear ribonucleop... 69 2e-09
ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [A... 69 2e-09
ref|XP_004251889.1| PREDICTED: heterogeneous nuclear ribonucleop... 69 2e-09
gb|AFC89654.1| RBP42 [Elaeis guineensis] 68 3e-09
gb|EXC18502.1| Uncharacterized RNA-binding protein [Morus notabi... 68 4e-09
ref|XP_007021676.1| RNA-binding family protein [Theobroma cacao]... 68 4e-09
tpg|DAA58966.1| TPA: heterogeneous nuclear ribonucleoprotein A3-... 67 6e-09
ref|NP_001150933.1| heterogeneous nuclear ribonucleoprotein A3-l... 67 6e-09
ref|XP_006644366.1| PREDICTED: glycine-rich cell wall structural... 67 8e-09
ref|XP_004969158.1| PREDICTED: heterogeneous nuclear ribonucleop... 67 8e-09
ref|NP_001043567.1| Os01g0614500 [Oryza sativa Japonica Group] g... 67 8e-09
gb|EAY74957.1| hypothetical protein OsI_02853 [Oryza sativa Indi... 67 8e-09
ref|XP_002458152.1| hypothetical protein SORBIDRAFT_03g027820 [S... 66 1e-08
ref|NP_001168409.1| hypothetical protein [Zea mays] gi|223948081... 66 1e-08
ref|XP_003569353.1| PREDICTED: uncharacterized protein LOC100825... 65 2e-08
ref|XP_002300424.2| hypothetical protein POPTR_0001s38640g [Popu... 65 2e-08
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi... 65 3e-08
>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein
VITISV_017556 [Vitis vinifera]
Length = 449
Score = 71.2 bits (173), Expect = 3e-10
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGKSRGFALFVYKTAEAA+AALVD TK IDG Q+ CKLAI+
Sbjct: 201 QTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLAIE 242
>gb|EYU26340.1| hypothetical protein MIMGU_mgv1a024658mg [Mimulus guttatus]
Length = 387
Score = 69.7 bits (169), Expect = 1e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
TGKS+GFALFVYKTAEAARA+LVD K +DGHQ+ CKLA D
Sbjct: 226 TGKSKGFALFVYKTAEAARASLVDPVKNLDGHQLNCKLASD 266
>gb|EPS74427.1| hypothetical protein M569_00327 [Genlisea aurea]
Length = 414
Score = 69.7 bits (169), Expect = 1e-09
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
TGKS+GFALFVYKT EAARA+LVD K +DGHQ+ CKLA+D
Sbjct: 220 TGKSKGFALFVYKTVEAARASLVDPIKKVDGHQLSCKLAVD 260
>ref|XP_006358946.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Solanum tuberosum]
Length = 446
Score = 68.9 bits (167), Expect = 2e-09
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
TGKS+G+ALFVYKTAEAA+++LVD K IDGHQ+ CKLAID
Sbjct: 204 TGKSKGYALFVYKTAEAAQSSLVDPVKNIDGHQLNCKLAID 244
>ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [Amborella trichopoda]
gi|548856064|gb|ERN13920.1| hypothetical protein
AMTR_s00021p00110500 [Amborella trichopoda]
Length = 409
Score = 68.9 bits (167), Expect = 2e-09
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGKSRGFALFVYKT EAA+AAL + K++DGHQ+ CKLA+D
Sbjct: 189 QTGKSRGFALFVYKTVEAAKAALEEPNKSVDGHQLVCKLAVD 230
>ref|XP_004251889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Solanum
lycopersicum]
Length = 440
Score = 68.9 bits (167), Expect = 2e-09
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
TGKS+G+ALFVYKTAEAA+++LVD K IDGHQ+ CKLAID
Sbjct: 204 TGKSKGYALFVYKTAEAAQSSLVDPVKNIDGHQLNCKLAID 244
>gb|AFC89654.1| RBP42 [Elaeis guineensis]
Length = 413
Score = 68.2 bits (165), Expect = 3e-09
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKTAE A A+LVD TK IDGH + CKLAID
Sbjct: 197 QTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAID 238
>gb|EXC18502.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 416
Score = 67.8 bits (164), Expect = 4e-09
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RG+ALFVYKT E ARAALVD KTI+G Q+ CKLAID
Sbjct: 207 QTGKCRGYALFVYKTPEGARAALVDPVKTIEGRQLSCKLAID 248
>ref|XP_007021676.1| RNA-binding family protein [Theobroma cacao]
gi|508721304|gb|EOY13201.1| RNA-binding family protein
[Theobroma cacao]
Length = 429
Score = 67.8 bits (164), Expect = 4e-09
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGKSRGFALFVYKTA+ A+AALV+ K IDG QM CKLAI+
Sbjct: 204 QTGKSRGFALFVYKTADGAQAALVEPVKNIDGRQMNCKLAIE 245
>tpg|DAA58966.1| TPA: heterogeneous nuclear ribonucleoprotein A3-like protein 2
isoform 1 [Zea mays] gi|414881836|tpg|DAA58967.1| TPA:
heterogeneous nuclear ribonucleoprotein A3-like protein
2 isoform 2 [Zea mays]
Length = 447
Score = 67.0 bits (162), Expect = 6e-09
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD K IDGHQ+ CKLA+D
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLALD 253
>ref|NP_001150933.1| heterogeneous nuclear ribonucleoprotein A3-like protein 2 [Zea
mays] gi|195643046|gb|ACG40991.1| heterogeneous nuclear
ribonucleoprotein A3-like protein 2 [Zea mays]
Length = 447
Score = 67.0 bits (162), Expect = 6e-09
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD K IDGHQ+ CKLA+D
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLALD 253
>ref|XP_006644366.1| PREDICTED: glycine-rich cell wall structural protein-like, partial
[Oryza brachyantha]
Length = 279
Score = 66.6 bits (161), Expect = 8e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD+ K IDGHQ+ CKLAI+
Sbjct: 47 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIE 88
>ref|XP_004969158.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
X1 [Setaria italica] gi|514778678|ref|XP_004969159.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
A1-like isoform X2 [Setaria italica]
Length = 450
Score = 66.6 bits (161), Expect = 8e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD+ K IDGHQ+ CKLAI+
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIE 253
>ref|NP_001043567.1| Os01g0614500 [Oryza sativa Japonica Group]
gi|54290288|dbj|BAD61233.1| heterogeneous nuclear
ribonucleoprotein A2/B1-like [Oryza sativa Japonica
Group] gi|113533098|dbj|BAF05481.1| Os01g0614500 [Oryza
sativa Japonica Group]
Length = 447
Score = 66.6 bits (161), Expect = 8e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD+ K IDGHQ+ CKLAI+
Sbjct: 213 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIE 254
>gb|EAY74957.1| hypothetical protein OsI_02853 [Oryza sativa Indica Group]
Length = 260
Score = 66.6 bits (161), Expect = 8e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD+ K IDGHQ+ CKLAI+
Sbjct: 26 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDGHQLVCKLAIE 67
>ref|XP_002458152.1| hypothetical protein SORBIDRAFT_03g027820 [Sorghum bicolor]
gi|241930127|gb|EES03272.1| hypothetical protein
SORBIDRAFT_03g027820 [Sorghum bicolor]
Length = 445
Score = 66.2 bits (160), Expect = 1e-08
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD K IDGHQ+ CKLAI+
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLAIE 253
>ref|NP_001168409.1| hypothetical protein [Zea mays] gi|223948081|gb|ACN28124.1| unknown
[Zea mays] gi|413950595|gb|AFW83244.1| hypothetical
protein ZEAMMB73_012333 [Zea mays]
Length = 448
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT E A+A+LVD+ K ID HQ+ CKLAID
Sbjct: 212 QTGKFRGFALFVYKTPEGAQASLVDSVKVIDSHQLVCKLAID 253
>ref|XP_003569353.1| PREDICTED: uncharacterized protein LOC100825606 [Brachypodium
distachyon]
Length = 448
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGK RGFALFVYKT + A+A+LVD+ KTI+GHQ+ CKLAI+
Sbjct: 212 QTGKFRGFALFVYKTPDGAQASLVDSIKTIEGHQLVCKLAIE 253
>ref|XP_002300424.2| hypothetical protein POPTR_0001s38640g [Populus trichocarpa]
gi|550349194|gb|EEE85229.2| hypothetical protein
POPTR_0001s38640g [Populus trichocarpa]
Length = 376
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +3
Query: 3 QTGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
QTGKS+GFALFVYKTAE A+AAL++ K I+G Q+ CKLAID
Sbjct: 211 QTGKSKGFALFVYKTAEGAQAALLEPVKMIEGRQLNCKLAID 252
>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42572443|ref|NP_974317.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|75335116|sp|Q9LKA4.1|UBA2C_ARATH RecName:
Full=UBP1-associated protein 2C
gi|8777484|dbj|BAA97064.1| unnamed protein product
[Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|20259621|gb|AAM14167.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
AT3G15010 [Arabidopsis thaliana]
gi|332642081|gb|AEE75602.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|332642082|gb|AEE75603.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +3
Query: 6 TGKSRGFALFVYKTAEAARAALVDATKTIDGHQMGCKLAID 128
TGKSRGFALFVYKTAE A+AAL D K IDG + CKLA+D
Sbjct: 204 TGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVD 244