BLASTX nr result
ID: Sinomenium21_contig00006424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00006424
(834 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006445192.1| hypothetical protein CICLE_v10020296mg [Citr... 70 1e-09
ref|XP_007051975.1| RNA-binding CRS1 / YhbY domain-containing pr... 65 3e-08
ref|XP_007051974.1| RNA-binding CRS1 / YhbY (CRM) domain-contain... 65 3e-08
ref|XP_006339500.1| PREDICTED: CRS2-associated factor 1, mitocho... 64 7e-08
ref|XP_004229865.1| PREDICTED: CRS2-associated factor 1, mitocho... 64 7e-08
dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas] 64 9e-08
gb|EXC11728.1| CRS2-associated factor 1 [Morus notabilis] 63 2e-07
ref|XP_002511770.1| conserved hypothetical protein [Ricinus comm... 62 3e-07
ref|NP_194830.2| CRS2-associated factor 1 [Arabidopsis thaliana]... 62 3e-07
ref|XP_002320749.2| hypothetical protein POPTR_0014s07040g [Popu... 61 6e-07
ref|XP_007135256.1| hypothetical protein PHAVU_010G114000g [Phas... 60 8e-07
ref|XP_003548405.1| PREDICTED: CRS2-associated factor 1, mitocho... 60 1e-06
ref|XP_004492668.1| PREDICTED: CRS2-associated factor 1, mitocho... 60 1e-06
ref|XP_006283851.1| hypothetical protein CARUB_v10004958mg [Caps... 60 1e-06
ref|XP_004308420.1| PREDICTED: CRS2-associated factor 1, mitocho... 59 3e-06
gb|EYU32033.1| hypothetical protein MIMGU_mgv1a007317mg [Mimulus... 58 4e-06
ref|XP_002869349.1| DNA binding protein [Arabidopsis lyrata subs... 58 5e-06
ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitocho... 58 5e-06
ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitocho... 57 9e-06
>ref|XP_006445192.1| hypothetical protein CICLE_v10020296mg [Citrus clementina]
gi|568875790|ref|XP_006490973.1| PREDICTED:
CRS2-associated factor 1, mitochondrial-like [Citrus
sinensis] gi|557547454|gb|ESR58432.1| hypothetical
protein CICLE_v10020296mg [Citrus clementina]
Length = 423
Score = 70.1 bits (170), Expect = 1e-09
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDY-CPREDGEFLDNNKSFDYLAVESNCSVGGQVSPSKSI 177
D+VPCILVTF+KEQIVVWRG DY P +DG+F + + FD +S C V +V S
Sbjct: 354 DLVPCILVTFEKEQIVVWRGKDYKHPGDDGQFFTHRELFDDPENDSACGVEEEVMGDSSS 413
Query: 178 HQLFSNSDDE 207
Q F + DDE
Sbjct: 414 QQDFCSGDDE 423
>ref|XP_007051975.1| RNA-binding CRS1 / YhbY domain-containing protein isoform 2
[Theobroma cacao] gi|508704236|gb|EOX96132.1|
RNA-binding CRS1 / YhbY domain-containing protein
isoform 2 [Theobroma cacao]
Length = 278
Score = 65.1 bits (157), Expect = 3e-08
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFD 117
D+VPCILVTFDKEQ+VVWRG DY P +DG F N + FD
Sbjct: 222 DLVPCILVTFDKEQVVVWRGRDYKPPDDGHFFSNREFFD 260
>ref|XP_007051974.1| RNA-binding CRS1 / YhbY (CRM) domain-containing protein isoform 1
[Theobroma cacao] gi|508704235|gb|EOX96131.1|
RNA-binding CRS1 / YhbY (CRM) domain-containing protein
isoform 1 [Theobroma cacao]
Length = 400
Score = 65.1 bits (157), Expect = 3e-08
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFD 117
D+VPCILVTFDKEQ+VVWRG DY P +DG F N + FD
Sbjct: 344 DLVPCILVTFDKEQVVVWRGRDYKPPDDGHFFSNREFFD 382
>ref|XP_006339500.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like isoform X1
[Solanum tuberosum]
Length = 410
Score = 63.9 bits (154), Expect = 7e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFDY 120
D+VPCILVTFDKEQIVVWRG +Y P EDG FL + FD+
Sbjct: 341 DLVPCILVTFDKEQIVVWRGQNYKPSEDGFFLTEREPFDH 380
>ref|XP_004229865.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Solanum
lycopersicum]
Length = 411
Score = 63.9 bits (154), Expect = 7e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFDY 120
D+VPCILVTFDKEQIVVWRG +Y P EDG FL + FD+
Sbjct: 342 DLVPCILVTFDKEQIVVWRGQNYKPSEDGFFLTEREPFDH 381
>dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]
Length = 415
Score = 63.5 bits (153), Expect = 9e-08
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDG------EFLDNNKSFDYLAVESNCSVGGQVS 162
D+VPCILVTF+KEQIVVWRG DY P EDG EF D+ + E +CS S
Sbjct: 347 DLVPCILVTFEKEQIVVWRGKDYKPPEDGELFADREFFDDPEGSSMGLSEDSCSSDDNSS 406
Query: 163 PSKSIHQLFSNSDDE 207
P F + DDE
Sbjct: 407 PG------FYSGDDE 415
>gb|EXC11728.1| CRS2-associated factor 1 [Morus notabilis]
Length = 175
Score = 62.8 bits (151), Expect = 2e-07
Identities = 29/52 (55%), Positives = 34/52 (65%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFDYLAVESNCSVGGQ 156
D+VPC LVTF+KEQIVVWRG DY PREDG + + FD + GGQ
Sbjct: 124 DLVPCFLVTFEKEQIVVWRGRDYKPREDGYLYTDKELFDANTISCADENGGQ 175
>ref|XP_002511770.1| conserved hypothetical protein [Ricinus communis]
gi|223548950|gb|EEF50439.1| conserved hypothetical
protein [Ricinus communis]
Length = 411
Score = 62.0 bits (149), Expect = 3e-07
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFDYLAVESNCSVGGQVSPSKSIH 180
D+VPCILVTF+KEQIVVWRG DY P E G+ + + FD S S + H
Sbjct: 342 DLVPCILVTFEKEQIVVWRGKDYKPPEYGQSFVDRECFDDPESNEEYSKESCSSDESNDH 401
Query: 181 QLFSNSDDE 207
Q F +S DE
Sbjct: 402 QDFYSSSDE 410
>ref|NP_194830.2| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75161464|sp|Q8VYD9.1|CAF1M_ARATH RecName:
Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor gi|18176015|gb|AAL59968.1| unknown protein
[Arabidopsis thaliana] gi|20465409|gb|AAM20129.1|
unknown protein [Arabidopsis thaliana]
gi|332660446|gb|AEE85846.1| CRS2-associated factor
1-like protein [Arabidopsis thaliana]
Length = 405
Score = 62.0 bits (149), Expect = 3e-07
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDY-CPREDGE---FLDNNKSFDYLAVESNCSVGGQVSPS 168
D+VPCILVTFDKEQ+V+WRG DY P+ED E F+ S D V+ +CS G Q SP
Sbjct: 344 DLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSID-SDVDLSCSRGAQDSPD 402
Query: 169 KS 174
++
Sbjct: 403 ET 404
>ref|XP_002320749.2| hypothetical protein POPTR_0014s07040g [Populus trichocarpa]
gi|550323679|gb|EEE99064.2| hypothetical protein
POPTR_0014s07040g [Populus trichocarpa]
Length = 405
Score = 60.8 bits (146), Expect = 6e-07
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCP--REDGEFLDNNKSFDYLAVESNC 141
D+VPCILVTFDKEQIVVWRG DY P EDG+F + + FD + +C
Sbjct: 342 DLVPCILVTFDKEQIVVWRGKDYKPPEDEDGQFFADRQPFDDPQSDMDC 390
>ref|XP_007135256.1| hypothetical protein PHAVU_010G114000g [Phaseolus vulgaris]
gi|561008301|gb|ESW07250.1| hypothetical protein
PHAVU_010G114000g [Phaseolus vulgaris]
Length = 397
Score = 60.5 bits (145), Expect = 8e-07
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFD 117
DMVPCI VTF+ EQ+VVWRG DY P +DG FL + +SFD
Sbjct: 344 DMVPCIPVTFENEQVVVWRGKDYKPPKDGYFLKDRESFD 382
>ref|XP_003548405.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Glycine
max]
Length = 396
Score = 60.1 bits (144), Expect = 1e-06
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFD 117
DMVPCILVTF+ EQIVVWRG DY +DG FL + +SFD
Sbjct: 344 DMVPCILVTFENEQIVVWRGKDYKHPKDGYFLKDRESFD 382
>ref|XP_004492668.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cicer
arietinum]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFD 117
D+VPCILVTFDKEQIVVWRG DY + G FL + +SFD
Sbjct: 347 DLVPCILVTFDKEQIVVWRGKDYKHLKGGYFLKDRESFD 385
>ref|XP_006283851.1| hypothetical protein CARUB_v10004958mg [Capsella rubella]
gi|482552556|gb|EOA16749.1| hypothetical protein
CARUB_v10004958mg [Capsella rubella]
Length = 404
Score = 59.7 bits (143), Expect = 1e-06
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGE----FLDNNKSFDYLAVESNCSVGGQVSPS 168
D+VPCILVTFDKEQ+V+WRG DY P +D + F+ S D + +C G Q SP
Sbjct: 343 DLVPCILVTFDKEQVVIWRGKDYKPPKDDDEYSSFIHRESSID---TDLSCGRGAQDSPD 399
Query: 169 KS 174
++
Sbjct: 400 ET 401
>ref|XP_004308420.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 411
Score = 58.5 bits (140), Expect = 3e-06
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFD 117
++VPCILVTFDKEQIVVW+G DY P +D FL + FD
Sbjct: 342 ELVPCILVTFDKEQIVVWKGKDYKPVQDAYFLPERECFD 380
>gb|EYU32033.1| hypothetical protein MIMGU_mgv1a007317mg [Mimulus guttatus]
Length = 411
Score = 58.2 bits (139), Expect = 4e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFD 117
D+VPC+LVTF+KEQIV+WRG +Y P E G FL+ + +D
Sbjct: 351 DLVPCVLVTFEKEQIVIWRGENYKPAEGGYFLEERELYD 389
>ref|XP_002869349.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315185|gb|EFH45608.1| DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 57.8 bits (138), Expect = 5e-06
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGE----FLDNNKSFDYLAVESNCSVGGQVSPS 168
D+VPCILVTFDKEQ+V+WRG +Y P +D + F+ S D + +CS G Q SP
Sbjct: 345 DLVPCILVTFDKEQVVIWRGKNYKPPKDDDEYSSFIHRESSIDSDG-DLSCSRGAQDSPG 403
Query: 169 KS 174
++
Sbjct: 404 ET 405
>ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera]
gi|296089125|emb|CBI38828.3| unnamed protein product
[Vitis vinifera]
Length = 418
Score = 57.8 bits (138), Expect = 5e-06
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFD 117
D VPCILVTF+KEQIVVWRG DY P E G+F +S D
Sbjct: 349 DFVPCILVTFEKEQIVVWRGKDYKPTEAGQFPIERESLD 387
>ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cucumis
sativus] gi|449480099|ref|XP_004155799.1| PREDICTED: LOW
QUALITY PROTEIN: CRS2-associated factor 1,
mitochondrial-like [Cucumis sativus]
Length = 392
Score = 57.0 bits (136), Expect = 9e-06
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +1
Query: 1 DMVPCILVTFDKEQIVVWRGNDYCPREDGEFLDNNKSFDYLAVESNC 141
D+VPCILVTFDKEQIVVWRG DY P + G +L ++FD + + C
Sbjct: 338 DLVPCILVTFDKEQIVVWRGKDYQPLDTG-YLTVRETFDDVDGNTGC 383