BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00005963
         (438 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   169   5e-40
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   165   7e-39
ref|XP_006853781.1| hypothetical protein AMTR_s00056p00208470 [A...   162   3e-38
gb|EXB74612.1| Putative mediator of RNA polymerase II transcript...   154   2e-35
emb|CBI36012.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_007024366.1| RNA polymerase transcriptional regulation me...   152   5e-35
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   152   5e-35
ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II tra...   152   6e-35
ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II tra...   150   2e-34
ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prun...   150   2e-34
ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II tra...   150   2e-34
ref|XP_004165668.1| PREDICTED: mediator of RNA polymerase II tra...   150   2e-34
ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phas...   149   3e-34
ref|XP_004252363.1| PREDICTED: mediator of RNA polymerase II tra...   148   7e-34
ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II tra...   148   7e-34
ref|XP_004297626.1| PREDICTED: mediator of RNA polymerase II tra...   148   9e-34
gb|AGZ15418.1| mediator of RNA polymerase II transcription subun...   147   2e-33
ref|XP_004235631.1| PREDICTED: mediator of RNA polymerase II tra...   147   2e-33
ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II tra...   147   2e-33
ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II tra...   147   2e-33

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  169 bits (427), Expect = 5e-40
 Identities = 83/113 (73%), Positives = 89/113 (78%)
 Frame = +2

Query: 98  MATTPTMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFA 277
           MA+TP M PPN AAGNP                MTGICF DQLWL+S+PLDRN VFDYFA
Sbjct: 1   MASTP-MAPPNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFA 59

Query: 278 MSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           +SPFYDWTCNNEQLRLRSIHPLD SHLSKMTG EY+LNEV+EP LFVIRKQKR
Sbjct: 60  LSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKR 112


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  165 bits (417), Expect = 7e-39
 Identities = 79/107 (73%), Positives = 84/107 (78%)
 Frame = +2

Query: 116 MMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYD 295
           M PPN AAGNP                MTGICF DQLWL+S+PLDRN VFDYFA+SPFYD
Sbjct: 1   MAPPNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD 60

Query: 296 WTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           WTCNNEQLRLRSIHPLD SHLSKMTG EY+LNEV+EP LFVIRKQKR
Sbjct: 61  WTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKR 107


>ref|XP_006853781.1| hypothetical protein AMTR_s00056p00208470 [Amborella trichopoda]
           gi|548857442|gb|ERN15248.1| hypothetical protein
           AMTR_s00056p00208470 [Amborella trichopoda]
          Length = 174

 Score =  162 bits (411), Expect = 3e-38
 Identities = 78/113 (69%), Positives = 88/113 (77%)
 Frame = +2

Query: 98  MATTPTMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFA 277
           MA TP  +PP + A  PTN+             MTGICF DQLWL+++PLDRN VFDYFA
Sbjct: 1   MAATP--LPPPNLAAPPTNMEANQSLPPPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFA 58

Query: 278 MSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           +SPFYDWTCNNEQLR+RSIHPLDIS LSKMTGIEY+LNEV+EP LFV RKQKR
Sbjct: 59  LSPFYDWTCNNEQLRMRSIHPLDISQLSKMTGIEYMLNEVMEPHLFVFRKQKR 111


>gb|EXB74612.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Morus notabilis]
          Length = 251

 Score =  154 bits (388), Expect = 2e-35
 Identities = 69/80 (86%), Positives = 76/80 (95%)
 Frame = +2

Query: 197 MTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGI 376
           MTGICF DQLWL+SFPLDRN VFDYFA+SPFYDWTCNNEQLR+RSIHPLD++HLSKMTG 
Sbjct: 26  MTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLTHLSKMTGT 85

Query: 377 EYVLNEVVEPCLFVIRKQKR 436
           EY+LNEV+EP LFVIRKQKR
Sbjct: 86  EYMLNEVLEPNLFVIRKQKR 105


>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  153 bits (387), Expect = 2e-35
 Identities = 70/80 (87%), Positives = 75/80 (93%)
 Frame = +2

Query: 197 MTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGI 376
           MTGICF DQLWL+S+PLDRN VFDYFA+SPFYDWTCNNEQLRLRSIHPLD SHLSKMTG 
Sbjct: 1   MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60

Query: 377 EYVLNEVVEPCLFVIRKQKR 436
           EY+LNEV+EP LFVIRKQKR
Sbjct: 61  EYMLNEVMEPHLFVIRKQKR 80


>ref|XP_007024366.1| RNA polymerase transcriptional regulation mediator-related isoform
           1 [Theobroma cacao] gi|508779732|gb|EOY26988.1| RNA
           polymerase transcriptional regulation mediator-related
           isoform 1 [Theobroma cacao]
          Length = 257

 Score =  152 bits (384), Expect = 5e-35
 Identities = 76/116 (65%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
 Frame = +2

Query: 98  MATTPTMMPPNSAAGN---PTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFD 268
           MAT P   P  +AAGN   P  L             MTGICF DQLWL+++PLDRN +FD
Sbjct: 1   MATPPVAPPQAAAAGNFEAPPPLPMQPPGTD-----MTGICFRDQLWLNTYPLDRNLIFD 55

Query: 269 YFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           YFA+SPFYDWTCNNEQLR+ SIHPLDIS LSKMTG+EY+L+EV+EP LFVIRKQKR
Sbjct: 56  YFALSPFYDWTCNNEQLRMHSIHPLDISQLSKMTGVEYMLSEVMEPNLFVIRKQKR 111


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  152 bits (384), Expect = 5e-35
 Identities = 67/80 (83%), Positives = 76/80 (95%)
 Frame = +2

Query: 197 MTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGI 376
           MTGICF DQLWL+++PLDRN +FDYFA+SPFYDWTCNNEQLRL+SIHPLD+SHLSKMTG 
Sbjct: 27  MTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQSIHPLDLSHLSKMTGT 86

Query: 377 EYVLNEVVEPCLFVIRKQKR 436
           EY+LNEV+EP LFVIRKQKR
Sbjct: 87  EYMLNEVIEPNLFVIRKQKR 106


>ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Solanum tuberosum]
          Length = 247

 Score =  152 bits (383), Expect = 6e-35
 Identities = 74/113 (65%), Positives = 85/113 (75%)
 Frame = +2

Query: 98  MATTPTMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFA 277
           MA+TP MMPPN+    P                MT ICF DQLWL+++PLDRN VFDYFA
Sbjct: 1   MASTP-MMPPNADGSAPA-------APPLPGTDMTSICFRDQLWLNTYPLDRNLVFDYFA 52

Query: 278 MSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           +SPFYDWTCNNEQLR R+IHPLD SH+SKMTG+EY L+EV+EP LFVIRKQKR
Sbjct: 53  LSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKR 105


>ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X2 [Glycine max]
          Length = 249

 Score =  150 bits (379), Expect = 2e-34
 Identities = 68/80 (85%), Positives = 75/80 (93%)
 Frame = +2

Query: 197 MTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGI 376
           MTGICF DQLWL+SFPLDRN VFDYFA+SPFYDWTCNNEQLR+RS+HPLDIS LSKMTG 
Sbjct: 24  MTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDISQLSKMTGT 83

Query: 377 EYVLNEVVEPCLFVIRKQKR 436
           EY+L+EV+EP LFVIRKQKR
Sbjct: 84  EYMLSEVMEPHLFVIRKQKR 103


>ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
           gi|462413902|gb|EMJ18951.1| hypothetical protein
           PRUPE_ppa010369mg [Prunus persica]
          Length = 252

 Score =  150 bits (379), Expect = 2e-34
 Identities = 76/110 (69%), Positives = 81/110 (73%)
 Frame = +2

Query: 107 TPTMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFAMSP 286
           TP M PP S  G P  +             MTGICF DQLWL+S+PLDRN VFDYFA+SP
Sbjct: 3   TPPMAPP-SMEGTPPPMAVQPPGTD-----MTGICFKDQLWLNSYPLDRNLVFDYFAISP 56

Query: 287 FYDWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           FYDWTCNNEQLR RSIHPLD SHLSKMTG EY LNEV+EP LFV RKQKR
Sbjct: 57  FYDWTCNNEQLRQRSIHPLDPSHLSKMTGTEYSLNEVMEPHLFVFRKQKR 106


>ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X1 [Glycine max]
          Length = 252

 Score =  150 bits (379), Expect = 2e-34
 Identities = 68/80 (85%), Positives = 75/80 (93%)
 Frame = +2

Query: 197 MTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGI 376
           MTGICF DQLWL+SFPLDRN VFDYFA+SPFYDWTCNNEQLR+RS+HPLDIS LSKMTG 
Sbjct: 24  MTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDISQLSKMTGT 83

Query: 377 EYVLNEVVEPCLFVIRKQKR 436
           EY+L+EV+EP LFVIRKQKR
Sbjct: 84  EYMLSEVMEPHLFVIRKQKR 103


>ref|XP_004165668.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Cucumis sativus]
          Length = 226

 Score =  150 bits (378), Expect = 2e-34
 Identities = 67/80 (83%), Positives = 75/80 (93%)
 Frame = +2

Query: 197 MTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGI 376
           MTGICF DQLWL+++PLDRN VFDYFA+SPFYDWTCNNEQLR+RSIHPLD+S LSKMTGI
Sbjct: 1   MTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGI 60

Query: 377 EYVLNEVVEPCLFVIRKQKR 436
           EY+LNEV+EP LFV RKQKR
Sbjct: 61  EYMLNEVMEPHLFVFRKQKR 80


>ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
           gi|561008656|gb|ESW07605.1| hypothetical protein
           PHAVU_010G143300g [Phaseolus vulgaris]
          Length = 247

 Score =  149 bits (377), Expect = 3e-34
 Identities = 67/80 (83%), Positives = 75/80 (93%)
 Frame = +2

Query: 197 MTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGI 376
           MTGICF DQLWL+SFPLDRN VFDYFA+SPFYDWTCNNEQLR+RS+HPLD+S LSKMTG 
Sbjct: 22  MTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLSKMTGT 81

Query: 377 EYVLNEVVEPCLFVIRKQKR 436
           EY+L+EV+EP LFVIRKQKR
Sbjct: 82  EYMLSEVMEPHLFVIRKQKR 101


>ref|XP_004252363.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform 2 [Solanum lycopersicum]
          Length = 225

 Score =  148 bits (374), Expect = 7e-34
 Identities = 72/108 (66%), Positives = 80/108 (74%)
 Frame = +2

Query: 113 TMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFAMSPFY 292
           TM P  +  GN                 MTGICF DQLWL+++PLDRN VFDYFA+SPFY
Sbjct: 2   TMTPVMAPMGNANFDGGAPALPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFY 61

Query: 293 DWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           DWTCNNEQLR RSIHPLD SHLSKMTG EY+L+EV+EP LFVIRKQKR
Sbjct: 62  DWTCNNEQLRSRSIHPLDTSHLSKMTGSEYMLSEVMEPNLFVIRKQKR 109


>ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform 1 [Solanum lycopersicum]
          Length = 251

 Score =  148 bits (374), Expect = 7e-34
 Identities = 72/108 (66%), Positives = 80/108 (74%)
 Frame = +2

Query: 113 TMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFAMSPFY 292
           TM P  +  GN                 MTGICF DQLWL+++PLDRN VFDYFA+SPFY
Sbjct: 2   TMTPVMAPMGNANFDGGAPALPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFY 61

Query: 293 DWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           DWTCNNEQLR RSIHPLD SHLSKMTG EY+L+EV+EP LFVIRKQKR
Sbjct: 62  DWTCNNEQLRSRSIHPLDTSHLSKMTGSEYMLSEVMEPNLFVIRKQKR 109


>ref|XP_004297626.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Fragaria vesca subsp. vesca]
          Length = 249

 Score =  148 bits (373), Expect = 9e-34
 Identities = 73/105 (69%), Positives = 79/105 (75%)
 Frame = +2

Query: 122 PPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWT 301
           PPN   G P  +             MTGICF DQLWL S+PLDRN VFDYFA+SPFYDWT
Sbjct: 5   PPNMEGGPPQVVAQPPGTD------MTGICFKDQLWLSSYPLDRNLVFDYFAISPFYDWT 58

Query: 302 CNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           CNNEQLR R+IHPLDISHLSKMTGIEY+L +V EP LFVIRKQKR
Sbjct: 59  CNNEQLRQRAIHPLDISHLSKMTGIEYMLVDVKEPHLFVIRKQKR 103


>gb|AGZ15418.1| mediator of RNA polymerase II transcription subunit 6 [Phaseolus
           vulgaris]
          Length = 250

 Score =  147 bits (371), Expect = 2e-33
 Identities = 66/80 (82%), Positives = 74/80 (92%)
 Frame = +2

Query: 197 MTGICFSDQLWLHSFPLDRNFVFDYFAMSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGI 376
           MTGICF DQLWL+S PLDRN VFDYFA+SPFYDWTCNNEQLR+RS+HPLD+S LSKMTG 
Sbjct: 22  MTGICFRDQLWLNSLPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLSKMTGT 81

Query: 377 EYVLNEVVEPCLFVIRKQKR 436
           EY+L+EV+EP LFVIRKQKR
Sbjct: 82  EYMLSEVMEPHLFVIRKQKR 101


>ref|XP_004235631.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform 3 [Solanum lycopersicum]
          Length = 221

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/113 (63%), Positives = 84/113 (74%)
 Frame = +2

Query: 98  MATTPTMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFA 277
           MA+TP MMP N+    P                MT ICF DQLWL+++PLD+N VFDYFA
Sbjct: 1   MASTP-MMPLNADGSAPV-------APPLPGTDMTSICFRDQLWLNTYPLDKNLVFDYFA 52

Query: 278 MSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           +SPFYDWTCNNEQLR R+IHPLD SH+SKMTG+EY L+EV+EP LFVIRKQKR
Sbjct: 53  LSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKR 105


>ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform 2 [Solanum lycopersicum]
          Length = 247

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/113 (63%), Positives = 84/113 (74%)
 Frame = +2

Query: 98  MATTPTMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFA 277
           MA+TP MMP N+    P                MT ICF DQLWL+++PLD+N VFDYFA
Sbjct: 1   MASTP-MMPLNADGSAPV-------APPLPGTDMTSICFRDQLWLNTYPLDKNLVFDYFA 52

Query: 278 MSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           +SPFYDWTCNNEQLR R+IHPLD SH+SKMTG+EY L+EV+EP LFVIRKQKR
Sbjct: 53  LSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKR 105


>ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform 1 [Solanum lycopersicum]
          Length = 248

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/113 (63%), Positives = 84/113 (74%)
 Frame = +2

Query: 98  MATTPTMMPPNSAAGNPTNLXXXXXXXXXXXXXMTGICFSDQLWLHSFPLDRNFVFDYFA 277
           MA+TP MMP N+    P                MT ICF DQLWL+++PLD+N VFDYFA
Sbjct: 1   MASTP-MMPLNADGSAPV-------APPLPGTDMTSICFRDQLWLNTYPLDKNLVFDYFA 52

Query: 278 MSPFYDWTCNNEQLRLRSIHPLDISHLSKMTGIEYVLNEVVEPCLFVIRKQKR 436
           +SPFYDWTCNNEQLR R+IHPLD SH+SKMTG+EY L+EV+EP LFVIRKQKR
Sbjct: 53  LSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKR 105