BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00005747
         (328 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,...    63   5e-08
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...    61   1e-07
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...    57   2e-06

>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 554

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
 Frame = +3

Query: 81  MESGRYLLHSSSLFPQKIQLRN----STPLSSVLMLYEQXXXXXXXXXXXXXXWNFPAAA 248
           ME+GR+ L SSS FP   QLR+    S+P +SVLML+EQ               +FP + 
Sbjct: 1   MEAGRHFLSSSSAFPSTTQLRHPLPPSSPSTSVLMLHEQAAPAVTSVPTSFITRHFPTSV 60

Query: 249 LLQEQHVEFRPLL---SDDKTLQKTLD 320
           LLQEQ  EF+PLL    ++K  Q TLD
Sbjct: 61  LLQEQRDEFKPLLHIFKEEKASQATLD 87


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
           gi|462400636|gb|EMJ06193.1| hypothetical protein
           PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
 Frame = +3

Query: 81  MESGRYLLHSSSLFPQKIQLR----NSTPLSSVLMLYEQXXXXXXXXXXXXXXWNFPAAA 248
           ME+GR+ L SSS FP    LR    +S+P +SVLML+EQ               +FP + 
Sbjct: 1   MEAGRHFLSSSSAFPSTTHLRHPLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPTSV 60

Query: 249 LLQEQHVEFRPL---LSDDKTLQKTLD 320
           LLQEQ  EF+PL   L +DKT +  LD
Sbjct: 61  LLQEQRDEFKPLLHVLKEDKTSEAALD 87


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
           gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
           FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
 Frame = +3

Query: 81  MESGRYLLHSSSLFPQKIQLRNSTPLSSVLMLYEQXXXXXXXXXXXXXXWNFPAAALLQE 260
           ME+GR LL SS  FP +  L+NS   SSVL+L EQ               +FP + LLQE
Sbjct: 1   MEAGRTLLSSSPSFPTRTHLKNSL-TSSVLILREQATPAVSSIPTTSTAQHFPTSVLLQE 59

Query: 261 QHVEFRPL---LSDDKTLQKTLDWR 326
           Q  EFRPL     +D+  Q TLD R
Sbjct: 60  QRDEFRPLQNIFKEDRASQATLDRR 84