BLASTX nr result
ID: Sinomenium21_contig00005727
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00005727
(706 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago... 46 2e-10
ref|XP_004234824.1| PREDICTED: DNA polymerase delta small subuni... 46 3e-10
ref|XP_004234825.1| PREDICTED: DNA polymerase delta small subuni... 46 3e-10
gb|EXC04787.1| hypothetical protein L484_007895 [Morus notabilis] 47 7e-10
ref|XP_002323281.2| DNA polymerase delta small subunit-related f... 46 9e-10
ref|XP_007204389.1| hypothetical protein PRUPE_ppa005894mg [Prun... 46 9e-10
ref|XP_004136567.1| PREDICTED: DNA polymerase delta small subuni... 46 2e-09
ref|XP_004493584.1| PREDICTED: DNA polymerase delta small subuni... 45 2e-09
ref|XP_004304364.1| PREDICTED: DNA polymerase delta small subuni... 45 2e-09
ref|XP_002530707.1| DNA polymerase delta small subunit, putative... 45 2e-09
ref|XP_006429877.1| hypothetical protein CICLE_v10012551mg [Citr... 46 2e-09
ref|XP_006492859.1| PREDICTED: DNA polymerase delta small subuni... 46 3e-09
ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni... 46 3e-09
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera] 46 3e-09
ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subuni... 46 7e-09
ref|XP_006294235.1| hypothetical protein CARUB_v10023232mg [Caps... 47 1e-08
gb|EMS55680.1| DNA polymerase delta small subunit [Triticum urartu] 49 1e-08
gb|EMT28193.1| DNA polymerase delta small subunit [Aegilops taus... 49 2e-08
dbj|BAK06710.1| predicted protein [Hordeum vulgare subsp. vulgare] 49 2e-08
ref|XP_002309305.2| DNA polymerase delta small subunit-related f... 44 2e-08
>ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago truncatula]
gi|355500275|gb|AES81478.1| DNA polymerase delta small
subunit [Medicago truncatula]
Length = 454
Score = 46.2 bits (108), Expect(2) = 2e-10
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA+QIVRVVIAGNSVE P G+LNGQ
Sbjct: 210 EQSIAAQIVRVVIAGNSVEMPRGLLNGQ 237
Score = 45.8 bits (107), Expect(2) = 2e-10
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 172 EDKYVVLVSGLSVGSSKSNPLQFQLLVDHITGHLGDE 208
>ref|XP_004234824.1| PREDICTED: DNA polymerase delta small subunit-like isoform 1
[Solanum lycopersicum]
Length = 461
Score = 45.8 bits (107), Expect(2) = 3e-10
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 181 EDKYVVFISGLSVGRSSSNPLQFQLLVDHITGHLGDE 217
Score = 45.4 bits (106), Expect(2) = 3e-10
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA+QIV+VVIAGNSVE P G+LNGQ
Sbjct: 219 EQNIAAQIVQVVIAGNSVEVPHGLLNGQ 246
>ref|XP_004234825.1| PREDICTED: DNA polymerase delta small subunit-like isoform 2
[Solanum lycopersicum]
Length = 442
Score = 45.8 bits (107), Expect(2) = 3e-10
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 181 EDKYVVFISGLSVGRSSSNPLQFQLLVDHITGHLGDE 217
Score = 45.4 bits (106), Expect(2) = 3e-10
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA+QIV+VVIAGNSVE P G+LNGQ
Sbjct: 219 EQNIAAQIVQVVIAGNSVEVPHGLLNGQ 246
>gb|EXC04787.1| hypothetical protein L484_007895 [Morus notabilis]
Length = 235
Score = 46.6 bits (109), Expect(2) = 7e-10
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +2
Query: 2 EEEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
+E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 123 QEDKYVVFVSGLRIGSSISNPLQFQLLVDHITGHLGDE 160
Score = 43.5 bits (101), Expect(2) = 7e-10
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA+QIV+VVIAGNSVE P G LNGQ
Sbjct: 162 EQGIAAQIVQVVIAGNSVEIPRGFLNGQ 189
>ref|XP_002323281.2| DNA polymerase delta small subunit-related family protein [Populus
trichocarpa] gi|550320820|gb|EEF05042.2| DNA polymerase
delta small subunit-related family protein [Populus
trichocarpa]
Length = 442
Score = 45.8 bits (107), Expect(2) = 9e-10
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 181 EDKYVVFISGVNAGSSLSNPLQFQLLVDHITGHLGDE 217
Score = 43.9 bits (102), Expect(2) = 9e-10
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA++IV VVIAGNSVE P G+LNGQ
Sbjct: 219 EQGIAAEIVHVVIAGNSVEIPLGLLNGQ 246
>ref|XP_007204389.1| hypothetical protein PRUPE_ppa005894mg [Prunus persica]
gi|462399920|gb|EMJ05588.1| hypothetical protein
PRUPE_ppa005894mg [Prunus persica]
Length = 438
Score = 45.8 bits (107), Expect(2) = 9e-10
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 177 EDKYVVFVSGLRVGSSSSNPLQFQLLVDHITGHLGDE 213
Score = 43.9 bits (102), Expect(2) = 9e-10
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA+QIV VVIAGNS+E P G+LNGQ
Sbjct: 215 EQGIAAQIVHVVIAGNSIEVPRGLLNGQ 242
>ref|XP_004136567.1| PREDICTED: DNA polymerase delta small subunit-like [Cucumis
sativus] gi|449526900|ref|XP_004170451.1| PREDICTED: DNA
polymerase delta small subunit-like [Cucumis sativus]
Length = 438
Score = 45.8 bits (107), Expect(2) = 2e-09
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 178 EDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDE 214
Score = 43.1 bits (100), Expect(2) = 2e-09
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA+QIV VVI GNSVE P GILNGQ
Sbjct: 216 EQGIAAQIVHVVICGNSVEIPRGILNGQ 243
>ref|XP_004493584.1| PREDICTED: DNA polymerase delta small subunit-like isoform X1
[Cicer arietinum] gi|502109181|ref|XP_004493585.1|
PREDICTED: DNA polymerase delta small subunit-like
isoform X2 [Cicer arietinum]
Length = 433
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E++Y NPLQFQLL+DHITGHLGDE
Sbjct: 172 EDRYVVLVSGLSVGSSRSNPLQFQLLVDHITGHLGDE 208
Score = 44.3 bits (103), Expect(2) = 2e-09
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IASQIV VVIAGNSV+ P G+LNGQ
Sbjct: 210 EQSIASQIVHVVIAGNSVDIPRGLLNGQ 237
>ref|XP_004304364.1| PREDICTED: DNA polymerase delta small subunit-like [Fragaria vesca
subsp. vesca]
Length = 437
Score = 45.4 bits (106), Expect(2) = 2e-09
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQLNIRNLECHTLSFSTILEL 363
EQ +ASQIV VVIAGNSVE P G+LNGQ N+ + TLS S I EL
Sbjct: 216 EQNLASQIVHVVIAGNSVELPRGLLNGQ-NLAPKDQATLS-SPIKEL 260
Score = 43.1 bits (100), Expect(2) = 2e-09
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPL FQLL+DHITGHLGDE
Sbjct: 178 EDKYVVFVSGLRVGSDSSNPLLFQLLVDHITGHLGDE 214
>ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
gi|223529721|gb|EEF31661.1| DNA polymerase delta small
subunit, putative [Ricinus communis]
Length = 425
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA++IV VVIAGNSVE P G+LNGQ
Sbjct: 216 EQAIAAEIVHVVIAGNSVEIPHGLLNGQ 243
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLG+E
Sbjct: 178 EDKYVVFVSGLNVGSSTFNPLQFQLLVDHITGHLGNE 214
>ref|XP_006429877.1| hypothetical protein CICLE_v10012551mg [Citrus clementina]
gi|557531934|gb|ESR43117.1| hypothetical protein
CICLE_v10012551mg [Citrus clementina]
Length = 252
Score = 45.8 bits (107), Expect(2) = 2e-09
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 179 EDKYVVLVSGLNVGSGTSNPLQFQLLVDHITGHLGDE 215
Score = 42.7 bits (99), Expect(2) = 2e-09
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQL 309
EQ IA++IV VVIAGNS+E P G+LNGQ+
Sbjct: 217 EQGIAAEIVHVVIAGNSIEIPRGLLNGQV 245
>ref|XP_006492859.1| PREDICTED: DNA polymerase delta small subunit-like [Citrus
sinensis]
Length = 439
Score = 45.8 bits (107), Expect(2) = 3e-09
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 179 EDKYVVLVSGLNVGSGTSNPLQFQLLVDHITGHLGDE 215
Score = 42.4 bits (98), Expect(2) = 3e-09
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA++IV VVIAGNS+E P G+LNGQ
Sbjct: 217 EQGIAAEIVHVVIAGNSIEIPRGLLNGQ 244
>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
gi|297739835|emb|CBI30017.3| unnamed protein product
[Vitis vinifera]
Length = 439
Score = 45.8 bits (107), Expect(2) = 3e-09
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 178 EDKYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDE 214
Score = 42.0 bits (97), Expect(2) = 3e-09
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA+QIV VVIAGNSV P G+LNGQ
Sbjct: 216 EQGIAAQIVHVVIAGNSVAVPRGLLNGQ 243
>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
Length = 439
Score = 45.8 bits (107), Expect(2) = 3e-09
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 178 EDKYVVFVSGLSVGSSXSNPLQFQLLVDHITGHLGDE 214
Score = 42.0 bits (97), Expect(2) = 3e-09
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA+QIV VVIAGNSV P G+LNGQ
Sbjct: 216 EQGIAAQIVHVVIAGNSVAVPRGLLNGQ 243
>ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
Length = 433
Score = 46.2 bits (108), Expect(2) = 7e-09
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQFQLLIDHITGHLGDE
Sbjct: 172 EDKYVVLVSGLSVGSSSSNPLQFQLLIDHITGHLGDE 208
Score = 40.4 bits (93), Expect(2) = 7e-09
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IASQIVRVV AGN VE P +LNGQ
Sbjct: 210 EQSIASQIVRVVFAGNLVEIPRRLLNGQ 237
>ref|XP_006294235.1| hypothetical protein CARUB_v10023232mg [Capsella rubella]
gi|482562943|gb|EOA27133.1| hypothetical protein
CARUB_v10023232mg [Capsella rubella]
Length = 439
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +2
Query: 2 EEEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
+E+KY NPLQFQLL+DHITGHLGDE
Sbjct: 177 QEDKYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDE 214
Score = 39.7 bits (91), Expect(2) = 1e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQLNIRNLECHTLSFSTILEL 363
EQ +A+QIV VVIAGNSVE P ++NGQ N+ + + TL + I EL
Sbjct: 216 EQGLAAQIVHVVIAGNSVEFPRKLINGQ-NLASKDQSTL-YEPIKEL 260
>gb|EMS55680.1| DNA polymerase delta small subunit [Triticum urartu]
Length = 384
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = +2
Query: 2 EEEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDEN 118
+E+KY NPLQFQLLIDHITGHLGDEN
Sbjct: 95 DEDKYVVFVSGLSVGSSTFNPLQFQLLIDHITGHLGDEN 133
Score = 37.0 bits (84), Expect(2) = 1e-08
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IAS+IVRVV+AGNSV LNGQ
Sbjct: 134 EQAIASKIVRVVVAGNSVHIAPRFLNGQ 161
>gb|EMT28193.1| DNA polymerase delta small subunit [Aegilops tauschii]
Length = 429
Score = 48.5 bits (114), Expect(2) = 2e-08
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDEN 118
E+KY NPLQFQLLIDHITGHLGDEN
Sbjct: 168 EDKYVVFVSGLSVGSSTFNPLQFQLLIDHITGHLGDEN 205
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IAS+IVRVV+AGNSV LNGQ
Sbjct: 206 EQAIASKIVRVVVAGNSVHIAPRFLNGQ 233
>dbj|BAK06710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 48.5 bits (114), Expect(2) = 2e-08
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDEN 118
E+KY NPLQFQLLIDHITGHLGDEN
Sbjct: 164 EDKYVVFVSGLSVGSSTFNPLQFQLLIDHITGHLGDEN 201
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IAS+IVRVV+AGNSV LNGQ
Sbjct: 202 EQTIASKIVRVVVAGNSVHIAPRFLNGQ 229
>ref|XP_002309305.2| DNA polymerase delta small subunit-related family protein [Populus
trichocarpa] gi|550336741|gb|EEE92828.2| DNA polymerase
delta small subunit-related family protein [Populus
trichocarpa]
Length = 454
Score = 43.5 bits (101), Expect(2) = 2e-08
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 5 EEKYXXXXXXXXXXXXXXNPLQFQLLIDHITGHLGDE 115
E+KY NPLQ+QLL+DHITGHLGD+
Sbjct: 193 EDKYVVFVSGVSVGSSTSNPLQYQLLVDHITGHLGDD 229
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 223 EQVIASQIVRVVIAGNSVETPFGILNGQ 306
EQ IA++IV VV AGNSVE P G+LNGQ
Sbjct: 231 EQGIAAEIVHVVFAGNSVEIPSGLLNGQ 258