BLASTX nr result
ID: Sinomenium21_contig00005345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00005345
(1003 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB45022.1| Double-stranded RNA-binding protein 2 [Morus nota... 85 4e-14
ref|XP_006375795.1| hypothetical protein POPTR_0013s03270g [Popu... 84 1e-13
ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding prote... 83 2e-13
ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus c... 81 8e-13
ref|XP_007206761.1| hypothetical protein PRUPE_ppa025249mg [Prun... 80 2e-12
ref|XP_006382716.1| hypothetical protein POPTR_0005s04720g [Popu... 78 7e-12
emb|CBI34243.3| unnamed protein product [Vitis vinifera] 77 1e-11
ref|XP_007030685.1| DsRNA-binding protein 3 [Theobroma cacao] gi... 73 2e-10
ref|XP_006489152.1| PREDICTED: double-stranded RNA-binding prote... 69 2e-09
ref|XP_006433112.1| hypothetical protein CICLE_v10000716mg [Citr... 69 3e-09
ref|XP_006433111.1| hypothetical protein CICLE_v10000716mg [Citr... 69 3e-09
ref|XP_007147120.1| hypothetical protein PHAVU_006G097600g [Phas... 65 6e-08
ref|XP_006419665.1| hypothetical protein CICLE_v10006777mg [Citr... 65 6e-08
ref|XP_003553745.1| PREDICTED: double-stranded RNA-binding prote... 64 1e-07
ref|XP_004289617.1| PREDICTED: double-stranded RNA-binding prote... 64 1e-07
ref|XP_003520829.1| PREDICTED: double-stranded RNA-binding prote... 62 4e-07
gb|ABF69992.1| double-stranded RNA-binding (DsRBD) domain-contai... 62 5e-07
ref|XP_007035485.1| DsRNA-binding protein 5, putative isoform 1 ... 61 8e-07
>gb|EXB45022.1| Double-stranded RNA-binding protein 2 [Morus notabilis]
Length = 677
Score = 85.1 bits (209), Expect = 4e-14
Identities = 48/98 (48%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARPRPHNYR---GMPSFIAPAVQIRSVVPVCSAPPVR 832
RP+N++A P +RT + SARP P F+APAV+IRSVVPVCSAPP R
Sbjct: 582 RPQNLSAQFPGTPRMRTGSPSCSARPMPERMELGGVRHKFMAPAVRIRSVVPVCSAPPPR 641
Query: 831 KMPQSSEQGLVSSDEKRTKEPEPEDISSASTELGKLRI 718
K P SS++G S+ EK K+ + +++S AS+ELGKL+I
Sbjct: 642 KKPGSSQEGTSSNMEK--KDKDQDNMSKASSELGKLQI 677
>ref|XP_006375795.1| hypothetical protein POPTR_0013s03270g [Populus trichocarpa]
gi|550324833|gb|ERP53592.1| hypothetical protein
POPTR_0013s03270g [Populus trichocarpa]
Length = 577
Score = 83.6 bits (205), Expect = 1e-13
Identities = 49/96 (51%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Frame = -2
Query: 996 ENMNAGMPAPVAIRTAVATFSARPRPH--NYRGM-PSFIAPAVQIRSVVPVCSAPPVRKM 826
+++ A +PAP +RT ++ A P P N G+ P F+APAV+IRSVVPVCSAPP RKM
Sbjct: 483 QDLAAQIPAPPRMRTGGHSYPASPLPQRMNLGGVRPRFMAPAVRIRSVVPVCSAPPARKM 542
Query: 825 PQSSEQGLVSSDEKRTKEPEPEDISSASTELGKLRI 718
P SS QG V + PED+++AS+EL KLRI
Sbjct: 543 PTSS-QGAVVPERGSKDTAAPEDMTAASSELSKLRI 577
>ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
Length = 532
Score = 83.2 bits (204), Expect = 2e-13
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARPRPHNY---RGMPSFIAPAVQIRSVVPVCSAPPVR 832
RP+N+ MPAP +RT + +S RPRP RG P +APAVQIR+VVPVCSAPP R
Sbjct: 453 RPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGRGPPRAMAPAVQIRTVVPVCSAPPAR 512
Query: 831 KMPQSSEQGLVSSDEKRTKE 772
K+P SS++GL E + E
Sbjct: 513 KIPSSSQEGLPPYRENKNAE 532
>ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus communis]
gi|223548237|gb|EEF49728.1| hypothetical protein
RCOM_1429110 [Ricinus communis]
Length = 568
Score = 80.9 bits (198), Expect = 8e-13
Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARPRPH--NYRGM-PSFIAPAVQIRSVVPVCSA-PPV 835
RP ++ A +P P +RT ++SARP+P ++ G+ P F+APAV+IRSVVPVCSA PP
Sbjct: 473 RPHDLAAQIPGPPRMRTGAPSYSARPQPQRMDFVGVHPRFMAPAVRIRSVVPVCSAPPPA 532
Query: 834 RKMPQSSEQGLVSSDEKRTKEPEPEDISSASTELGKLRI 718
RKMP + ++G + + +K PEDIS+ S E KLRI
Sbjct: 533 RKMPTAGQEGALLNKQKNGS--VPEDISTTS-EFSKLRI 568
>ref|XP_007206761.1| hypothetical protein PRUPE_ppa025249mg [Prunus persica]
gi|462402403|gb|EMJ07960.1| hypothetical protein
PRUPE_ppa025249mg [Prunus persica]
Length = 532
Score = 79.7 bits (195), Expect = 2e-12
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARPRPHNYR--GM-PSFIAPAVQIRSVVPVCSAPPVR 832
RP+N +PAP +RT + + SA P P G+ PSF+APAV+IRSVVPVCSAPP R
Sbjct: 445 RPQNFPNRIPAPPRMRTGIPSSSAAPMPERIELGGLRPSFMAPAVRIRSVVPVCSAPPAR 504
Query: 831 KMPQSSEQGLVSSDEKRTKEPEPEDISSAS 742
KMP SS++ + + EK K+ ED S AS
Sbjct: 505 KMPSSSQRRELPNMEK--KDTNQEDTSKAS 532
>ref|XP_006382716.1| hypothetical protein POPTR_0005s04720g [Populus trichocarpa]
gi|550338083|gb|ERP60513.1| hypothetical protein
POPTR_0005s04720g [Populus trichocarpa]
Length = 576
Score = 77.8 bits (190), Expect = 7e-12
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Frame = -2
Query: 996 ENMNAGMPAPVAIRTAVA-TFSARPRPH--NYRGM-PSFIAPAVQIRSVVPVCSAPPVRK 829
+++ A PAP +RT + ++ ARP P N G+ P F+APAV+IRSVVPVCSAPP R+
Sbjct: 483 QDLAAQNPAPPRMRTGGSHSYQARPLPQRMNLGGVHPRFMAPAVRIRSVVPVCSAPPARR 542
Query: 828 MPQSSEQGLVSSDEKRTKEPEPEDISSASTELGKLR 721
MP S G V D + PED+ +AS+ELGKL+
Sbjct: 543 MPTS---GQVVPDRESKATAVPEDVKTASSELGKLQ 575
>emb|CBI34243.3| unnamed protein product [Vitis vinifera]
Length = 551
Score = 76.6 bits (187), Expect = 1e-11
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARPRPHNY---RGMPSFIAPAVQIRSVVPVCSAPPVR 832
RP+N+ MPAP +RT + +S RPRP RG P +APAVQIR+VVPVCSAPP R
Sbjct: 464 RPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGRGPPRAMAPAVQIRTVVPVCSAPPAR 523
Query: 831 KMPQSSEQGLVS 796
K+P+ S + + S
Sbjct: 524 KIPRPSSKEMTS 535
>ref|XP_007030685.1| DsRNA-binding protein 3 [Theobroma cacao]
gi|508719290|gb|EOY11187.1| DsRNA-binding protein 3
[Theobroma cacao]
Length = 546
Score = 73.2 bits (178), Expect = 2e-10
Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Frame = -2
Query: 978 MPAPVAIRTAVATFSARPRPH--NYRGM-PSFIAPAVQIRSVVPVCSAPPVRKMPQSSEQ 808
+P P +RT FS RPR N M PS +AP V+IRSVVPVCSAPP R+ P ++
Sbjct: 459 VPVPPRMRTGAPPFSTRPRFERMNLGDMHPSSMAPPVRIRSVVPVCSAPPPREKPSFDQE 518
Query: 807 GLVSSDEKRTKEPEPEDISSASTELGKLRI 718
G++ + EK K+ ED+S+A++EL KL +
Sbjct: 519 GMLPNKEK--KDTVSEDVSTATSELSKLNM 546
>ref|XP_006489152.1| PREDICTED: double-stranded RNA-binding protein 2-like isoform X1
[Citrus sinensis] gi|568871978|ref|XP_006489153.1|
PREDICTED: double-stranded RNA-binding protein 2-like
isoform X2 [Citrus sinensis]
gi|568871980|ref|XP_006489154.1| PREDICTED:
double-stranded RNA-binding protein 2-like isoform X3
[Citrus sinensis] gi|568871982|ref|XP_006489155.1|
PREDICTED: double-stranded RNA-binding protein 2-like
isoform X4 [Citrus sinensis]
Length = 585
Score = 69.3 bits (168), Expect = 2e-09
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARPRPHNYR---GMPS--FIAPAVQIRSVVPVCSAPP 838
RP++ N + AP RTA + S+RP P R G+PS ++APAV IRSVVPVCSAPP
Sbjct: 494 RPQSSNPLVRAPPPRRTAASFCSSRPWPEGMRNQGGLPSRHYMAPAVHIRSVVPVCSAPP 553
Query: 837 VRKMPQSSEQGLVSSDEKRTKEPEPEDISSASTELGKLRI 718
+K P S EKRT+E + DIS+ + KL++
Sbjct: 554 SKKYPDPSR-------EKRTEE-QRGDISATCSNFSKLQL 585
>ref|XP_006433112.1| hypothetical protein CICLE_v10000716mg [Citrus clementina]
gi|557535234|gb|ESR46352.1| hypothetical protein
CICLE_v10000716mg [Citrus clementina]
Length = 432
Score = 68.9 bits (167), Expect = 3e-09
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Frame = -2
Query: 999 PENMNA--GMPAPVAIRTAVATFSARPRPHNY--RGM-PSFIAPAVQIRSVVPVCSAPPV 835
P+N+ + MPAP +RT V ++S RP + R M P F+APAV+IR+VVPVCSAPP
Sbjct: 340 PQNLTSFSQMPAPPRVRTGVTSYSTRPSTGSMYIRQMNPRFLAPAVRIRTVVPVCSAPPP 399
Query: 834 RKMPQSSEQGLVSSDEKRTKEPEPEDISSASTEL 733
R+MP S +G + E K ED S+ ++EL
Sbjct: 400 RQMPSSIPKGRFPNRE--VKNTIREDESTTTSEL 431
>ref|XP_006433111.1| hypothetical protein CICLE_v10000716mg [Citrus clementina]
gi|568835480|ref|XP_006471797.1| PREDICTED:
double-stranded RNA-binding protein 2-like [Citrus
sinensis] gi|557535233|gb|ESR46351.1| hypothetical
protein CICLE_v10000716mg [Citrus clementina]
Length = 571
Score = 68.9 bits (167), Expect = 3e-09
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Frame = -2
Query: 999 PENMNA--GMPAPVAIRTAVATFSARPRPHNY--RGM-PSFIAPAVQIRSVVPVCSAPPV 835
P+N+ + MPAP +RT V ++S RP + R M P F+APAV+IR+VVPVCSAPP
Sbjct: 479 PQNLTSFSQMPAPPRVRTGVTSYSTRPSTGSMYIRQMNPRFLAPAVRIRTVVPVCSAPPP 538
Query: 834 RKMPQSSEQGLVSSDEKRTKEPEPEDISSASTEL 733
R+MP S +G + E K ED S+ ++EL
Sbjct: 539 RQMPSSIPKGRFPNRE--VKNTIREDESTTTSEL 570
>ref|XP_007147120.1| hypothetical protein PHAVU_006G097600g [Phaseolus vulgaris]
gi|561020343|gb|ESW19114.1| hypothetical protein
PHAVU_006G097600g [Phaseolus vulgaris]
Length = 530
Score = 64.7 bits (156), Expect = 6e-08
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = -2
Query: 960 IRTAVATFSARPRPHNYRGM----PSFIAPAVQIRSVVPVCSAPPVRKMPQSSEQGLVSS 793
+RT + P + M P F+APAV+IRSVVPVCSAPP R M + + S
Sbjct: 450 LRTGIPQSPGTSAPERFGMMRSPTPLFMAPAVRIRSVVPVCSAPPRRSMAEE----VSKS 505
Query: 792 DEKRTKEPEPEDISSASTELGKLRI 718
EK +PE +D+S S+ELG LRI
Sbjct: 506 KEKEDLKPEDKDVSRTSSELGHLRI 530
>ref|XP_006419665.1| hypothetical protein CICLE_v10006777mg [Citrus clementina]
gi|557521538|gb|ESR32905.1| hypothetical protein
CICLE_v10006777mg [Citrus clementina]
Length = 873
Score = 64.7 bits (156), Expect = 6e-08
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARPRPHNYR---GMPS--FIAPAVQIRSVVPVCSAPP 838
RP++ N + AP RTA + S+RP P R G+PS ++APAV IRSVVPVCSAPP
Sbjct: 494 RPQSSNPLVRAPPPRRTAASFCSSRPWPEGMRNQGGLPSRHYMAPAVHIRSVVPVCSAPP 553
Query: 837 VRKMPQSSEQGLVSSDEKRTKEPEPEDISS 748
+K P S EKRT+E + DIS+
Sbjct: 554 SKKYPDPSR-------EKRTEE-QRGDISA 575
>ref|XP_003553745.1| PREDICTED: double-stranded RNA-binding protein 2-like isoform X1
[Glycine max] gi|571560285|ref|XP_006604833.1|
PREDICTED: double-stranded RNA-binding protein 2-like
isoform X2 [Glycine max]
Length = 538
Score = 63.9 bits (154), Expect = 1e-07
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = -2
Query: 900 PSFIAPAVQIRSVVPVCSAPPVRKMPQSSEQGLVSSDEKRTKEPEPEDISSASTELGKLR 721
P F+APAV+IRSVVPVCSAPP R M + S+ S EK +PE +++S S+ELG LR
Sbjct: 483 PLFMAPAVRIRSVVPVCSAPPRRSMAEVSQ-----SKEKEDLKPEDKEVSRTSSELGHLR 537
Query: 720 I 718
I
Sbjct: 538 I 538
>ref|XP_004289617.1| PREDICTED: double-stranded RNA-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 536
Score = 63.5 bits (153), Expect = 1e-07
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARP---RPHNYRGMPSFIAPAVQIRSVVPVCSAPPVR 832
RP N+ PAP +R ++ A P R R PSF+APAV+IR+VVPVCSAPP R
Sbjct: 450 RPHNLPTRFPAPPRMRAGNPSYLATPTLERTEFGRPRPSFMAPAVRIRTVVPVCSAPPAR 509
Query: 831 KMPQSSE 811
MP +S+
Sbjct: 510 SMPSTSQ 516
>ref|XP_003520829.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
Length = 539
Score = 62.0 bits (149), Expect = 4e-07
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = -2
Query: 900 PSFIAPAVQIRSVVPVCSAPPVRKMPQSSEQGLVSSDEKRTKEPEPEDISSASTELGKLR 721
P F+APAV+IRSVVPVCSAPP R M + S+ S EK +PE +++ S+ELG LR
Sbjct: 484 PLFMAPAVRIRSVVPVCSAPPRRSMAEVSQ-----SKEKEDLKPEDKEVPRTSSELGHLR 538
Query: 720 I 718
I
Sbjct: 539 I 539
>gb|ABF69992.1| double-stranded RNA-binding (DsRBD) domain-containing protein [Musa
acuminata]
Length = 610
Score = 61.6 bits (148), Expect = 5e-07
Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = -2
Query: 972 APVAIRTAVATFSARP---RPHNYRGMPSFIAPAVQIRSVVPVCSAPPVRKMPQSSEQGL 802
APV IRT + SAR P SF+AP V +RSVVPVCSAPPVRK EQ
Sbjct: 534 APVTIRTTIPVCSARAGAVNPGTLVSSTSFVAPPVNVRSVVPVCSAPPVRK----PEQNQ 589
Query: 801 VSSDEKRTKEPEPEDISSASTELGKLRI 718
S +EK T +S +E GK++I
Sbjct: 590 KSIEEKET-------MSKIDSEFGKIQI 610
>ref|XP_007035485.1| DsRNA-binding protein 5, putative isoform 1 [Theobroma cacao]
gi|590660765|ref|XP_007035486.1| DsRNA-binding protein 5,
putative isoform 1 [Theobroma cacao]
gi|508714514|gb|EOY06411.1| DsRNA-binding protein 5,
putative isoform 1 [Theobroma cacao]
gi|508714515|gb|EOY06412.1| DsRNA-binding protein 5,
putative isoform 1 [Theobroma cacao]
Length = 566
Score = 60.8 bits (146), Expect = 8e-07
Identities = 36/72 (50%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = -2
Query: 1002 RPENMNAGMPAPVAIRTAVATFSARPRPHNYRG---MPS--FIAPAVQIRSVVPVCSAPP 838
RPEN+N MP P R +T S RP + MPS FIAPAV IRSVVPVCSAP
Sbjct: 491 RPENLNPRMPTPPPRRITASTCSRRPWLEGMKNAGVMPSASFIAPAVHIRSVVPVCSAPS 550
Query: 837 VRKMPQSSEQGL 802
+K P ++ L
Sbjct: 551 AKKTPGPIQERL 562