BLASTX nr result
ID: Sinomenium21_contig00005281
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00005281
(1177 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 664 0.0
ref|XP_007040301.1| Xeroderma pigmentosum complementation group ... 643 0.0
gb|EXB37318.1| DNA repair helicase [Morus notabilis] 640 0.0
ref|XP_007040303.1| Xeroderma pigmentosum complementation group ... 640 0.0
ref|XP_007040302.1| Xeroderma pigmentosum complementation group ... 640 0.0
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So... 634 e-179
ref|XP_007210350.1| hypothetical protein PRUPE_ppa001762mg [Prun... 633 e-179
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So... 632 e-179
ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Popu... 631 e-178
ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu... 629 e-177
ref|XP_002299520.2| DNA repair protein and transcription factor ... 629 e-177
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri... 625 e-176
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu... 624 e-176
ref|XP_006829110.1| hypothetical protein AMTR_s00001p00265330 [A... 620 e-175
ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci... 619 e-175
ref|XP_007160091.1| hypothetical protein PHAVU_002G291500g [Phas... 618 e-174
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]... 615 e-173
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido... 615 e-173
dbj|BAB08509.1| DNA excision repair cross-complementing protein;... 615 e-173
gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japo... 615 e-173
>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
Length = 771
Score = 664 bits (1712), Expect = 0.0
Identities = 326/392 (83%), Positives = 353/392 (90%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
KSS+K++H+N +EDA++ EE ++D R+ EKEGK+RDFTKLELK DH+NRPLWACADG
Sbjct: 14 KSSSKDEHKNPVVEDEDAYYGEEFEDDYRDGEKEGKKRDFTKLELKVDHSNRPLWACADG 73
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI+ VL+K
Sbjct: 74 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSK 133
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSE 638
LSK KLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFP+VLKTLLRDE ISR+RIS E
Sbjct: 134 LSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRSRISHE 193
Query: 637 GSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNH 458
GS G+D FTISKT+G+I HDEL+N E A AAEEKETHSFE+DP+QVENVK+RCLPN
Sbjct: 194 GSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNA 253
Query: 457 LNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 278
LNYPMLEEYDFRNDTVNPDL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK
Sbjct: 254 LNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 313
Query: 277 SLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGV 98
SLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIR++QICRFTSDSKERFRGNAGV
Sbjct: 314 SLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERFRGNAGV 373
Query: 97 VVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
VVTTYNMVAFGG EWGL
Sbjct: 374 VVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 405
>ref|XP_007040301.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma
cacao] gi|508777546|gb|EOY24802.1| Xeroderma pigmentosum
complementation group B 1 isoform 1 [Theobroma cacao]
Length = 771
Score = 643 bits (1659), Expect = 0.0
Identities = 316/392 (80%), Positives = 347/392 (88%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
K + K+DHR++ +E +F+ +E D+ +R+ E EGK+RDF+KLELKPDHANRPLWACADG
Sbjct: 14 KFAAKDDHRSSTVEDEYSFYPDEGDDASRDGENEGKKRDFSKLELKPDHANRPLWACADG 73
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNK
Sbjct: 74 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 133
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSE 638
LSK KLPKEMIDFIHASTANYGKVKLVLKKNRYF+ESPFP+VLK LL+D+ I+RARI+SE
Sbjct: 134 LSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASE 193
Query: 637 GSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNH 458
+ GSD FTISK G+IG+ HD LLN E A A EEKETH+FEIDP+QVENVK+RCLPN
Sbjct: 194 SAHGSDGFTISKAAGEIGTGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNA 253
Query: 457 LNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 278
LNYPMLEEYDFRNDTVNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK
Sbjct: 254 LNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 313
Query: 277 SLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGV 98
SLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIR+DQICRFTSDSKERFRGNAGV
Sbjct: 314 SLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGV 373
Query: 97 VVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
VVTTYNMVAFGG EWGL
Sbjct: 374 VVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 405
>gb|EXB37318.1| DNA repair helicase [Morus notabilis]
Length = 787
Score = 640 bits (1651), Expect = 0.0
Identities = 327/412 (79%), Positives = 350/412 (84%), Gaps = 20/412 (4%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
KSS KE+ +N F +EDA+F +EID+D R E GK+RDF+KLELKPDHANRPLWACADG
Sbjct: 15 KSSAKEEQKNPFFEDEDAYFGDEIDDDFRYGE--GKKRDFSKLELKPDHANRPLWACADG 72
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNK
Sbjct: 73 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 132
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPK-----VLKTLLRDEAISRA 653
LSK KLPKEMIDFIH STANYGKVKLVLKKNRYF+ESPFP+ VLK LL+DE ISRA
Sbjct: 133 LSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFPEARFCSVLKRLLKDEVISRA 192
Query: 652 RISSEGSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQ------- 494
RI+SEGS G+D FTISKTMG++G+ D LLN E A AAEEKETHSFEIDPSQ
Sbjct: 193 RITSEGSHGNDGFTISKTMGEMGNGPDSLLNEAELAAAAEEKETHSFEIDPSQALSQKVR 252
Query: 493 --------VENVKERCLPNHLNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSK 338
VENVK+RCLPN LNYPMLEEYDFRNDTVNPDL+MELKPQAQPRPYQEKSLSK
Sbjct: 253 NRTSSCQQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSK 312
Query: 337 MFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRE 158
MFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIR+
Sbjct: 313 MFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRD 372
Query: 157 DQICRFTSDSKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
DQICRFTSDSKERFRGNAGVVVTTYNMVAFGG EWGL
Sbjct: 373 DQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 424
>ref|XP_007040303.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial
[Theobroma cacao] gi|508777548|gb|EOY24804.1| Xeroderma
pigmentosum complementation group B 2 isoform 3, partial
[Theobroma cacao]
Length = 742
Score = 640 bits (1651), Expect = 0.0
Identities = 314/388 (80%), Positives = 345/388 (88%)
Frame = -1
Query: 1165 KEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGRIFL 986
++DHR++ +E +F+ +E D+ +R+ E EGK+RDF+KLELKPDHANRPLWACADGRIFL
Sbjct: 39 QDDHRSSTVEDEYSFYPDEGDDASRDGENEGKKRDFSKLELKPDHANRPLWACADGRIFL 98
Query: 985 ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKLSKM 806
ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNKLSK
Sbjct: 99 ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKT 158
Query: 805 KLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEGSQG 626
KLPKEMIDFIHASTANYGKVKLVLKKNRYF+ESPFP+VLK LL+D+ I+RARI+SE + G
Sbjct: 159 KLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHG 218
Query: 625 SDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHLNYP 446
SD FTISK G+IG+ HD LLN E A A EEKETH+FEIDP+QVENVK+RCLPN LNYP
Sbjct: 219 SDGFTISKAAGEIGTGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNALNYP 278
Query: 445 MLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 266
MLEEYDFRNDTVNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG
Sbjct: 279 MLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 338
Query: 265 VSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVVVTT 86
VSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIR+DQICRFTSDSKERFRGNAGVVVTT
Sbjct: 339 VSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTT 398
Query: 85 YNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
YNMVAFGG EWGL
Sbjct: 399 YNMVAFGGKRSEESEKIIEEIRNREWGL 426
>ref|XP_007040302.1| Xeroderma pigmentosum complementation group B 2 isoform 2, partial
[Theobroma cacao] gi|508777547|gb|EOY24803.1| Xeroderma
pigmentosum complementation group B 2 isoform 2, partial
[Theobroma cacao]
Length = 809
Score = 640 bits (1651), Expect = 0.0
Identities = 314/388 (80%), Positives = 345/388 (88%)
Frame = -1
Query: 1165 KEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGRIFL 986
++DHR++ +E +F+ +E D+ +R+ E EGK+RDF+KLELKPDHANRPLWACADGRIFL
Sbjct: 39 QDDHRSSTVEDEYSFYPDEGDDASRDGENEGKKRDFSKLELKPDHANRPLWACADGRIFL 98
Query: 985 ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKLSKM 806
ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNKLSK
Sbjct: 99 ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKT 158
Query: 805 KLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEGSQG 626
KLPKEMIDFIHASTANYGKVKLVLKKNRYF+ESPFP+VLK LL+D+ I+RARI+SE + G
Sbjct: 159 KLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHG 218
Query: 625 SDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHLNYP 446
SD FTISK G+IG+ HD LLN E A A EEKETH+FEIDP+QVENVK+RCLPN LNYP
Sbjct: 219 SDGFTISKAAGEIGTGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNALNYP 278
Query: 445 MLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 266
MLEEYDFRNDTVNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG
Sbjct: 279 MLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 338
Query: 265 VSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVVVTT 86
VSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIR+DQICRFTSDSKERFRGNAGVVVTT
Sbjct: 339 VSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTT 398
Query: 85 YNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
YNMVAFGG EWGL
Sbjct: 399 YNMVAFGGKRSEESEKIIEEIRNREWGL 426
>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
Length = 768
Score = 634 bits (1636), Expect = e-179
Identities = 312/392 (79%), Positives = 344/392 (87%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
K ++KE++R A + ++D ++ EE +D + E+EGK+ DFTKLELKPDHANRPLWACADG
Sbjct: 17 KFASKEEYR-ASTADDDQYYPEEGGDDFHDGEREGKKMDFTKLELKPDHANRPLWACADG 75
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI+ VL+K
Sbjct: 76 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSK 135
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSE 638
LSK KLPKEMIDFIHASTANYGKVKLVLKKNRYF+ESPFP+VLK LL D+AI +ARISSE
Sbjct: 136 LSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSE 195
Query: 637 GSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNH 458
G G D FT+SK + +I HDEL+N ++ A AAEEKETHSFEIDP+QVENVK+RCLPN
Sbjct: 196 GMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNA 255
Query: 457 LNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 278
LNYPM+EEYDFRNDTVNPDL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK
Sbjct: 256 LNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 315
Query: 277 SLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGV 98
SLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIRE+QICRFTSDSKERFRGN GV
Sbjct: 316 SLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNVGV 375
Query: 97 VVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
VVTTYNMVAFGG EWGL
Sbjct: 376 VVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 407
>ref|XP_007210350.1| hypothetical protein PRUPE_ppa001762mg [Prunus persica]
gi|462406085|gb|EMJ11549.1| hypothetical protein
PRUPE_ppa001762mg [Prunus persica]
Length = 768
Score = 633 bits (1633), Expect = e-179
Identities = 319/381 (83%), Positives = 341/381 (89%), Gaps = 3/381 (0%)
Frame = -1
Query: 1135 EEDAFFV-EEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQ 959
+EDA+F E+IDED R+ E GK+RDFTKLELKPDH NRPLWACADGRIFLETFSPLYKQ
Sbjct: 25 DEDAYFGGEDIDEDVRDGE--GKKRDFTKLELKPDHINRPLWACADGRIFLETFSPLYKQ 82
Query: 958 AYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKLSKMKLPKEMIDF 779
AYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNKLSK KLPKEMIDF
Sbjct: 83 AYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDF 142
Query: 778 IHASTANYGKVKLVLKKNRYFVESPFP--KVLKTLLRDEAISRARISSEGSQGSDAFTIS 605
IH STANYGKVKLVLKKNRY VESPFP +VLKTLL+DE IS++RI SEGS+GSD FTIS
Sbjct: 143 IHGSTANYGKVKLVLKKNRYLVESPFPEARVLKTLLKDEVISKSRIISEGSRGSDGFTIS 202
Query: 604 KTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHLNYPMLEEYDF 425
KTMG+IG+ +LLN E A AAEEKETH+FE+DP+QVENVKERCLPN LNYPMLEEYDF
Sbjct: 203 KTMGEIGAGPSDLLNEAELAAAAEEKETHAFEVDPTQVENVKERCLPNALNYPMLEEYDF 262
Query: 424 RNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 245
RNDTVNPDL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI
Sbjct: 263 RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRI 322
Query: 244 RKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVVVTTYNMVAFG 65
RKSCLCLATNAVSVDQWAFQFKLWSTIR++QICRFTSDSKERFRGNAGVVVTTYNMVAFG
Sbjct: 323 RKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERFRGNAGVVVTTYNMVAFG 382
Query: 64 GXXXXXXXXXXXXXXXXEWGL 2
G EWGL
Sbjct: 383 GKRSEESEKIIEEIRNREWGL 403
>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
Length = 768
Score = 632 bits (1631), Expect = e-179
Identities = 311/392 (79%), Positives = 343/392 (87%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
K ++KE++R A + ++D ++ EE +D + E+EGK+ DFTKLELKPDH NRPLWACADG
Sbjct: 17 KFASKEEYR-ASTADDDHYYPEEGGDDFHDGEREGKKMDFTKLELKPDHGNRPLWACADG 75
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI+ VL+K
Sbjct: 76 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSK 135
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSE 638
LSK KLPKEMIDFIHASTANYGKVKLVLKKNRYF+ESPFP+VLK LL D+AI +ARISSE
Sbjct: 136 LSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSE 195
Query: 637 GSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNH 458
G G D FT+SK + +I HDEL+N ++ A AAEEKETHSFEIDP+QVENVK+RCLPN
Sbjct: 196 GMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNA 255
Query: 457 LNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 278
LNYPM+EEYDFRNDTVNPDL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK
Sbjct: 256 LNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 315
Query: 277 SLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGV 98
SLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIRE+QICRFTSDSKERFRGN GV
Sbjct: 316 SLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNVGV 375
Query: 97 VVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
VVTTYNMVAFGG EWGL
Sbjct: 376 VVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 407
>ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
gi|550346907|gb|ERP65332.1| hypothetical protein
POPTR_0001s09670g [Populus trichocarpa]
Length = 786
Score = 631 bits (1628), Expect = e-178
Identities = 314/392 (80%), Positives = 343/392 (87%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
K +TK+D+R++ + E+DAF+ EE +D R+ EGK+RDF+KLELKPDHANRPLWACADG
Sbjct: 15 KFTTKDDYRSSVA-EDDAFYPEEAGDDFRD---EGKKRDFSKLELKPDHANRPLWACADG 70
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNK
Sbjct: 71 RIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 130
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSE 638
LSK KLPKEMIDFIH STANYGKVKLVLKKNRYF+ESPF +VLK LL+DE I++ARI E
Sbjct: 131 LSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEVLKKLLKDEVIAKARIQPE 190
Query: 637 GSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNH 458
S G++ FTISK G+IG+SHD LLN E A AAEEKETHSFE+DPSQVENVK+RCLPN
Sbjct: 191 SSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNA 250
Query: 457 LNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 278
LNYPMLEEYDFRNDTVNPDLNMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK
Sbjct: 251 LNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 310
Query: 277 SLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGV 98
SLVGVSAACRI+KSCLCLATNAVSVDQWAFQF LWS I +DQICRFTSDSKERF+GNAGV
Sbjct: 311 SLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSLWSDISQDQICRFTSDSKERFKGNAGV 370
Query: 97 VVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
VVTTYNMVAFGG EWGL
Sbjct: 371 VVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 402
>ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
gi|550346909|gb|ERP65333.1| hypothetical protein
POPTR_0001s09670g [Populus trichocarpa]
Length = 783
Score = 629 bits (1621), Expect = e-177
Identities = 315/406 (77%), Positives = 344/406 (84%), Gaps = 14/406 (3%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
K +TK+D+R++ + E+DAF+ EE +D R+ E EGK+RDF+KLELKPDHANRPLWACADG
Sbjct: 15 KFTTKDDYRSSVA-EDDAFYPEEAGDDFRDGETEGKKRDFSKLELKPDHANRPLWACADG 73
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNK
Sbjct: 74 RIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 133
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPK--------------VLKTL 680
LSK KLPKEMIDFIH STANYGKVKLVLKKNRYF+ESPF + VLK L
Sbjct: 134 LSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEASWFFVSGFPPLSLVLKKL 193
Query: 679 LRDEAISRARISSEGSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDP 500
L+DE I++ARI E S G++ FTISK G+IG+SHD LLN E A AAEEKETHSFE+DP
Sbjct: 194 LKDEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDP 253
Query: 499 SQVENVKERCLPNHLNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGR 320
SQVENVK+RCLPN LNYPMLEEYDFRNDTVNPDLNMELKP AQPRPYQEKSLSKMFGNGR
Sbjct: 254 SQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGR 313
Query: 319 ARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRF 140
ARSGIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQF LWS I +DQICRF
Sbjct: 314 ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSLWSDISQDQICRF 373
Query: 139 TSDSKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
TSDSKERF+GNAGVVVTTYNMVAFGG EWGL
Sbjct: 374 TSDSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 419
>ref|XP_002299520.2| DNA repair protein and transcription factor [Populus trichocarpa]
gi|550346908|gb|EEE84325.2| DNA repair protein and
transcription factor [Populus trichocarpa]
Length = 803
Score = 629 bits (1621), Expect = e-177
Identities = 315/406 (77%), Positives = 344/406 (84%), Gaps = 14/406 (3%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
K +TK+D+R++ + E+DAF+ EE +D R+ E EGK+RDF+KLELKPDHANRPLWACADG
Sbjct: 15 KFTTKDDYRSSVA-EDDAFYPEEAGDDFRDGETEGKKRDFSKLELKPDHANRPLWACADG 73
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNK
Sbjct: 74 RIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 133
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPK--------------VLKTL 680
LSK KLPKEMIDFIH STANYGKVKLVLKKNRYF+ESPF + VLK L
Sbjct: 134 LSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEASWFFVSGFPPLSLVLKKL 193
Query: 679 LRDEAISRARISSEGSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDP 500
L+DE I++ARI E S G++ FTISK G+IG+SHD LLN E A AAEEKETHSFE+DP
Sbjct: 194 LKDEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDP 253
Query: 499 SQVENVKERCLPNHLNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGR 320
SQVENVK+RCLPN LNYPMLEEYDFRNDTVNPDLNMELKP AQPRPYQEKSLSKMFGNGR
Sbjct: 254 SQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGR 313
Query: 319 ARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRF 140
ARSGIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQF LWS I +DQICRF
Sbjct: 314 ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSLWSDISQDQICRF 373
Query: 139 TSDSKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
TSDSKERF+GNAGVVVTTYNMVAFGG EWGL
Sbjct: 374 TSDSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 419
>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
helicase, putative [Ricinus communis]
Length = 768
Score = 625 bits (1612), Expect = e-176
Identities = 312/392 (79%), Positives = 344/392 (87%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
+ S+ +DHR+ +ED + E++++D R + EGK++DF+KLELK DHANRPLWACADG
Sbjct: 13 QKSSNDDHRSTIMEDEDVYCGEDMEDD-RPDDGEGKKKDFSKLELKLDHANRPLWACADG 71
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNK
Sbjct: 72 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 131
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSE 638
LSK KLPKEMIDFIH STANYGKVKLVLKKNRY VESPFP+VLK LL+DE ISRAR+ SE
Sbjct: 132 LSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKDEVISRARLVSE 191
Query: 637 GSQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNH 458
+ + +FTISKT G+IG+SHD LLN E A AAEEKETHSFE+DPSQVENVK+RCLPN
Sbjct: 192 -AHVNGSFTISKTAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNA 250
Query: 457 LNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 278
LNYPMLEEYDFRNDTVNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK
Sbjct: 251 LNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGK 310
Query: 277 SLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGV 98
SLVGVSAACRI+KSCLCLATNAVSVDQWAFQF+LWSTIRE+QICRFTSDSKERF+GNAGV
Sbjct: 311 SLVGVSAACRIKKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSDSKERFQGNAGV 370
Query: 97 VVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
VVTTYNMVAFGG EWGL
Sbjct: 371 VVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 402
>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
Length = 768
Score = 624 bits (1610), Expect = e-176
Identities = 309/388 (79%), Positives = 340/388 (87%)
Frame = -1
Query: 1165 KEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGRIFL 986
KED++ A ++D + +++ D+D R +KEG +RDF+KLELKPDHANRPLWACADGRIFL
Sbjct: 17 KEDYKKANFEDDDVYHLDDPDDDDRYGDKEGGKRDFSKLELKPDHANRPLWACADGRIFL 76
Query: 985 ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKLSKM 806
ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI+ VL+KLSK
Sbjct: 77 ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKA 136
Query: 805 KLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEGSQG 626
KLPKEMIDFI+AST NYGKVKLVLKKNRY VESPFP+VL+ LL+DE I RAR+ E S G
Sbjct: 137 KLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLKDEVIGRARVVHEDS-G 195
Query: 625 SDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHLNYP 446
+ FT+SKT G++GS H+ LLN E+A AAEE+ETHSFEIDPSQVENVK+RCLPN LNYP
Sbjct: 196 NGEFTVSKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQVENVKQRCLPNALNYP 255
Query: 445 MLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 266
MLEEYDFRNDT+NPDL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG
Sbjct: 256 MLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 315
Query: 265 VSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVVVTT 86
VSAA RIRKSCLCLATNAVSVDQWAFQFKLWSTIR+DQICRFTSDSKERFRGNAGVVVTT
Sbjct: 316 VSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTT 375
Query: 85 YNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
YNMVAFGG EWGL
Sbjct: 376 YNMVAFGGKRSEESEKIIEEIRNREWGL 403
>ref|XP_006829110.1| hypothetical protein AMTR_s00001p00265330 [Amborella trichopoda]
gi|548834089|gb|ERM96526.1| hypothetical protein
AMTR_s00001p00265330 [Amborella trichopoda]
Length = 778
Score = 620 bits (1599), Expect = e-175
Identities = 311/394 (78%), Positives = 343/394 (87%), Gaps = 2/394 (0%)
Frame = -1
Query: 1177 KSSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADG 998
K S+K+D ++ F ++ED F + ++ +R+ +EGK+RDFTKLELK DH+NRPLWACADG
Sbjct: 15 KVSSKDDFKD-FGIDEDTDFADA-EDSSRDGLQEGKKRDFTKLELKLDHSNRPLWACADG 72
Query: 997 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNK 818
RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNK
Sbjct: 73 RIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 132
Query: 817 LSKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSE 638
LSK KLP+EMIDFIH STANYGKVKLVLKKNRYFVESPFP+VLKTLLRD I+ ARISS+
Sbjct: 133 LSKTKLPREMIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDGTIAGARISSD 192
Query: 637 GSQG--SDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLP 464
+ DAFT+SKTMG+I H ELL+ ++ A AAEEKETHSFEIDP+QVE VK+RCLP
Sbjct: 193 QASTLHGDAFTVSKTMGEIEGGHQELLDEVDVAAAAEEKETHSFEIDPAQVEQVKQRCLP 252
Query: 463 NHLNYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGA 284
N LN+PMLEEYDFRNDTVNPDLNMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGA
Sbjct: 253 NALNFPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGA 312
Query: 283 GKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNA 104
GKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQFKLWSTIR+DQICRFTSDSKE FRGNA
Sbjct: 313 GKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKETFRGNA 372
Query: 103 GVVVTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
GVVVTTYNMVAFGG EWGL
Sbjct: 373 GVVVTTYNMVAFGGKRSEESEKIIEEIRKREWGL 406
>ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum]
Length = 765
Score = 619 bits (1597), Expect = e-175
Identities = 313/391 (80%), Positives = 337/391 (86%)
Frame = -1
Query: 1174 SSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGR 995
SS ED R F+ ++DA+ ++ +D +GK +DF+KLELKPDH NRPLWAC +GR
Sbjct: 16 SSKFEDPRKGFADDDDAYGGDDPYDD-----DDGKTKDFSKLELKPDHPNRPLWACDNGR 70
Query: 994 IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKL 815
IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNKL
Sbjct: 71 IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKL 130
Query: 814 SKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEG 635
SK KLPKEMI FIH STANYGKVKLVLKKNRYFVESPFP+VLKTLLRD+ ISRARI+SEG
Sbjct: 131 SKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDGISRARITSEG 190
Query: 634 SQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHL 455
G D FTI+K G+I +HDELLN E A AAEEKE H+FEIDPSQVENVK+RCLPN L
Sbjct: 191 MHG-DGFTITKAAGEIEGTHDELLNEAEVAAAAEEKEAHAFEIDPSQVENVKQRCLPNAL 249
Query: 454 NYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKS 275
NYPMLEEYDFRNDTVNPDL MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKS
Sbjct: 250 NYPMLEEYDFRNDTVNPDLEMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKS 309
Query: 274 LVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVV 95
LVGVSAACRI+KSCLCLATNAVSVDQWAFQFKLWSTIRE+QICRFTSDSKERFRGNAGVV
Sbjct: 310 LVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVV 369
Query: 94 VTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
VTTYNMVAFGG EWGL
Sbjct: 370 VTTYNMVAFGGKRSEESEKIIEEIRNREWGL 400
>ref|XP_007160091.1| hypothetical protein PHAVU_002G291500g [Phaseolus vulgaris]
gi|561033506|gb|ESW32085.1| hypothetical protein
PHAVU_002G291500g [Phaseolus vulgaris]
Length = 768
Score = 618 bits (1594), Expect = e-174
Identities = 311/391 (79%), Positives = 335/391 (85%)
Frame = -1
Query: 1174 SSTKEDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGR 995
S +ED R F+ ++D + ++ +D EGK +DF+KLELK DH NRPLWAC +GR
Sbjct: 19 SKYQEDPRKGFAEDDDVYGSDDAYDD-----DEGKTKDFSKLELKQDHTNRPLWACGNGR 73
Query: 994 IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKL 815
IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TET+++VLNKL
Sbjct: 74 IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKL 133
Query: 814 SKMKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEG 635
SK KLPKEMI FIH STANYGKVKLVLKKNRYFVESPFP+VLKTLLRD+AISRARI SE
Sbjct: 134 SKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDAISRARIISEN 193
Query: 634 SQGSDAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHL 455
G D FTISK G+I +HDELLN E A AEEKETHSFE+DPSQVENVK+RCLPN L
Sbjct: 194 VNG-DGFTISKAAGEIEGTHDELLNEAEVAAVAEEKETHSFEVDPSQVENVKQRCLPNAL 252
Query: 454 NYPMLEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKS 275
NYPMLEEYDFRNDTVNPDL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKS
Sbjct: 253 NYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKS 312
Query: 274 LVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVV 95
LVGVSAACRI+KSCLCLATNAVSVDQWAFQFKLWSTIRE+QICRFTSDSKERFRGNAGVV
Sbjct: 313 LVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVV 372
Query: 94 VTTYNMVAFGGXXXXXXXXXXXXXXXXEWGL 2
VTTYNMVAFGG EWGL
Sbjct: 373 VTTYNMVAFGGKRSEESEKIIEEIRNREWGL 403
>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog
1; Short=AtXPB1; AltName: Full=XPB homolog 1
gi|11771735|gb|AAC49987.2| putative DNA repair protein
and transcription factor [Arabidopsis thaliana]
gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
[Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
repair helicase XPB1 [Arabidopsis thaliana]
Length = 767
Score = 615 bits (1586), Expect = e-173
Identities = 303/387 (78%), Positives = 333/387 (86%)
Frame = -1
Query: 1162 EDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGRIFLE 983
+D + +++ + ++ DED+R+ E E K+RDFTKLELKPDH NRPLWACADGRIFLE
Sbjct: 18 KDDQKMKNIQNAEDYYDDADEDSRDGEGEEKKRDFTKLELKPDHGNRPLWACADGRIFLE 77
Query: 982 TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKLSKMK 803
TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNKLSK K
Sbjct: 78 TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTK 137
Query: 802 LPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEGSQGS 623
LPKEMI+FIHASTANYGKVKLVLKKNRYF+ESPFP+VLK LL D+ I+RAR SSE G
Sbjct: 138 LPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGG 197
Query: 622 DAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHLNYPM 443
D F++ +T G++ + ELLN E A AAEEKETHSFEIDP+QVENVK+RCLPN LNYPM
Sbjct: 198 DGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPM 257
Query: 442 LEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV 263
LEEYDFRND VNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV
Sbjct: 258 LEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV 317
Query: 262 SAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVVVTTY 83
SAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIR+DQICRFTSDSKERFRGNAGVVVTTY
Sbjct: 318 SAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTY 377
Query: 82 NMVAFGGXXXXXXXXXXXXXXXXEWGL 2
NMVAFGG EWGL
Sbjct: 378 NMVAFGGKRSEESEKIIEEMRNREWGL 404
>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
Length = 767
Score = 615 bits (1586), Expect = e-173
Identities = 303/387 (78%), Positives = 333/387 (86%)
Frame = -1
Query: 1162 EDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGRIFLE 983
+D + +++ + ++ DED+R+ E E K+RDFTKLELKPDH NRPLWACADGRIFLE
Sbjct: 18 KDDQKMKNIQNAEDYYDDADEDSRDGEGEEKKRDFTKLELKPDHGNRPLWACADGRIFLE 77
Query: 982 TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKLSKMK 803
TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNKLSK K
Sbjct: 78 TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTK 137
Query: 802 LPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEGSQGS 623
LPKEMI+FIHASTANYGKVKLVLKKNRYF+ESPFP+VLK LL D+ I+RAR SSE G
Sbjct: 138 LPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGG 197
Query: 622 DAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHLNYPM 443
D F++ +T G++ + ELLN E A AAEEKETHSFEIDP+QVENVK+RCLPN LNYPM
Sbjct: 198 DGFSVGRTSGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPM 257
Query: 442 LEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV 263
LEEYDFRND VNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV
Sbjct: 258 LEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV 317
Query: 262 SAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVVVTTY 83
SAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIR+DQICRFTSDSKERFRGNAGVVVTTY
Sbjct: 318 SAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTY 377
Query: 82 NMVAFGGXXXXXXXXXXXXXXXXEWGL 2
NMVAFGG EWGL
Sbjct: 378 NMVAFGGKRSEESEKIIEEMRNREWGL 404
>dbj|BAB08509.1| DNA excision repair cross-complementing protein; similar to human
Xeroderma pigmentosum group B DNA repair protein
[Arabidopsis thaliana]
Length = 755
Score = 615 bits (1586), Expect = e-173
Identities = 303/387 (78%), Positives = 333/387 (86%)
Frame = -1
Query: 1162 EDHRNAFSVEEDAFFVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGRIFLE 983
+D + +++ + ++ DED+R+ E E K+RDFTKLELKPDH NRPLWACADGRIFLE
Sbjct: 6 KDDQKMKNIQNAEDYYDDADEDSRDGEGEEKKRDFTKLELKPDHGNRPLWACADGRIFLE 65
Query: 982 TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKLSKMK 803
TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+TETI++VLNKLSK K
Sbjct: 66 TFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTK 125
Query: 802 LPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEGSQGS 623
LPKEMI+FIHASTANYGKVKLVLKKNRYF+ESPFP+VLK LL D+ I+RAR SSE G
Sbjct: 126 LPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGG 185
Query: 622 DAFTISKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHLNYPM 443
D F++ +T G++ + ELLN E A AAEEKETHSFEIDP+QVENVK+RCLPN LNYPM
Sbjct: 186 DGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPM 245
Query: 442 LEEYDFRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV 263
LEEYDFRND VNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV
Sbjct: 246 LEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV 305
Query: 262 SAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVVVTTY 83
SAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIR+DQICRFTSDSKERFRGNAGVVVTTY
Sbjct: 306 SAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTY 365
Query: 82 NMVAFGGXXXXXXXXXXXXXXXXEWGL 2
NMVAFGG EWGL
Sbjct: 366 NMVAFGGKRSEESEKIIEEMRNREWGL 392
>gb|EEE55219.1| hypothetical protein OsJ_03086 [Oryza sativa Japonica Group]
Length = 766
Score = 615 bits (1586), Expect = e-173
Identities = 301/382 (78%), Positives = 340/382 (89%), Gaps = 2/382 (0%)
Frame = -1
Query: 1141 SVEEDAF--FVEEIDEDAREAEKEGKQRDFTKLELKPDHANRPLWACADGRIFLETFSPL 968
S++E A + +++D+D R+A++E K+RDFTKLELKPDHANRPLWACADGRIFLETFSPL
Sbjct: 23 SIDETAELDYTDDVDDDVRDADREVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPL 82
Query: 967 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLDTETIVTVLNKLSKMKLPKEM 788
YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL+T TI++V++KLSK KLP+E+
Sbjct: 83 YKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREI 142
Query: 787 IDFIHASTANYGKVKLVLKKNRYFVESPFPKVLKTLLRDEAISRARISSEGSQGSDAFTI 608
IDFIHASTANYGKVKLVLKKNRYFVESPFP+VLKTLL+D+ I RARIS E S G+ +FTI
Sbjct: 143 IDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLKDDIICRARISPEDSVGAPSFTI 202
Query: 607 SKTMGDIGSSHDELLNGIESAVAAEEKETHSFEIDPSQVENVKERCLPNHLNYPMLEEYD 428
SKT G++ S H++LL+G+E A A E+KETHSFEIDPSQVENVK+RCLPN LN+PMLEEYD
Sbjct: 203 SKTAGEMASGHEDLLDGMELAAATEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYD 262
Query: 427 FRNDTVNPDLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 248
FRNDTVNPDL MELKPQA+PRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR
Sbjct: 263 FRNDTVNPDLEMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 322
Query: 247 IRKSCLCLATNAVSVDQWAFQFKLWSTIREDQICRFTSDSKERFRGNAGVVVTTYNMVAF 68
I+KSCLCLATNAVSVDQWAFQFKLWSTI+++ I RFTSD+KE+FRG AGVVVTTYNMVAF
Sbjct: 323 IKKSCLCLATNAVSVDQWAFQFKLWSTIKDEHISRFTSDNKEKFRGMAGVVVTTYNMVAF 382
Query: 67 GGXXXXXXXXXXXXXXXXEWGL 2
GG EWGL
Sbjct: 383 GGKRSEDSEKIIEEIRNREWGL 404