BLASTX nr result
ID: Sinomenium21_contig00005061
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00005061
(1693 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002314126.1| transformer serine/arginine-rich ribonucleop... 160 1e-36
ref|XP_006425006.1| hypothetical protein CICLE_v10028652mg [Citr... 158 8e-36
gb|AFK47423.1| unknown [Medicago truncatula] 157 1e-35
ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding prote... 155 4e-35
ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein... 155 5e-35
ref|XP_007016197.1| RNA-binding family protein isoform 4 [Theobr... 154 9e-35
gb|AFK40884.1| unknown [Lotus japonicus] 154 1e-34
ref|XP_004500218.1| PREDICTED: pre-mRNA-splicing factor cwc22-li... 153 3e-34
ref|XP_003551321.1| PREDICTED: pre-mRNA-splicing factor cwc22-li... 153 3e-34
ref|XP_007146720.1| hypothetical protein PHAVU_006G064000g [Phas... 152 3e-34
ref|XP_004294256.1| PREDICTED: uncharacterized protein LOC101294... 152 6e-34
ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246... 152 6e-34
emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera] 152 6e-34
ref|XP_007016194.1| RNA-binding family protein isoform 1 [Theobr... 148 6e-33
ref|XP_002299830.2| hypothetical protein POPTR_0001s25520g [Popu... 148 8e-33
ref|XP_006586189.1| PREDICTED: uncharacterized RNA-binding prote... 147 1e-32
ref|XP_007016195.1| RNA-binding family protein isoform 2 [Theobr... 147 2e-32
gb|EAY89362.1| hypothetical protein OsI_10866 [Oryza sativa Indi... 144 2e-31
gb|ABF95136.1| RNA recognition motif family protein, expressed [... 144 2e-31
gb|ABF95135.1| RNA recognition motif family protein, expressed [... 144 2e-31
>ref|XP_002314126.1| transformer serine/arginine-rich ribonucleoprotein [Populus
trichocarpa] gi|222850534|gb|EEE88081.1| transformer
serine/arginine-rich ribonucleoprotein [Populus
trichocarpa]
Length = 316
Score = 160 bits (406), Expect = 1e-36
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
DVENPGNNLYVTG SP ITK+ELEKHFS+EG V+DVHLV+DPWTRESRGFGFVTMSTVE
Sbjct: 46 DVENPGNNLYVTGLSPRITKKELEKHFSAEG-TVIDVHLVVDPWTRESRGFGFVTMSTVE 104
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EADHCIKY+DRSVLEGRVITVEKA+R+R
Sbjct: 105 EADHCIKYLDRSVLEGRVITVEKAKRKR 132
>ref|XP_006425006.1| hypothetical protein CICLE_v10028652mg [Citrus clementina]
gi|568870553|ref|XP_006488466.1| PREDICTED:
uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Citrus sinensis] gi|557526940|gb|ESR38246.1|
hypothetical protein CICLE_v10028652mg [Citrus
clementina]
Length = 381
Score = 158 bits (399), Expect = 8e-36
Identities = 75/88 (85%), Positives = 83/88 (94%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
D ENPGNNLYVTG SP ITKRELEKHF++EG KV+DVHLV+DPWTRESRGFGFVTM+TVE
Sbjct: 38 DAENPGNNLYVTGLSPRITKRELEKHFAAEG-KVIDVHLVVDPWTRESRGFGFVTMATVE 96
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD CIKY+DRSVLEGR+ITVE+ARRRR
Sbjct: 97 EADRCIKYLDRSVLEGRIITVERARRRR 124
>gb|AFK47423.1| unknown [Medicago truncatula]
Length = 340
Score = 157 bits (397), Expect = 1e-35
Identities = 76/88 (86%), Positives = 83/88 (94%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
DVENPGNNLYVTG SP ITKRELEKHFS++G KVVDVHLV+DPWTRESRGFGFVTM T+E
Sbjct: 39 DVENPGNNLYVTGLSPRITKRELEKHFSAKG-KVVDVHLVVDPWTRESRGFGFVTMDTLE 97
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD C+KY++RSVLEGRVITVEKARRRR
Sbjct: 98 EADRCVKYLNRSVLEGRVITVEKARRRR 125
>ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Glycine max]
Length = 362
Score = 155 bits (393), Expect = 4e-35
Identities = 74/88 (84%), Positives = 82/88 (93%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
D ENPGNNLYVTG SP ITKRELEKHFS+EG KV+DVHLV+DPWTRESRGFGFVTM T+E
Sbjct: 42 DAENPGNNLYVTGLSPRITKRELEKHFSAEG-KVIDVHLVVDPWTRESRGFGFVTMETLE 100
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD C+KY++RSVLEGRVITVEKA+RRR
Sbjct: 101 EADRCVKYLNRSVLEGRVITVEKAKRRR 128
>ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
communis] gi|223540279|gb|EEF41850.1| FUS-interacting
serine-arginine-rich protein 1, putative [Ricinus
communis]
Length = 399
Score = 155 bits (392), Expect = 5e-35
Identities = 75/88 (85%), Positives = 83/88 (94%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
DVENPGNNLYVTG SP ITKR+LEKHF+SEG KV+DVHLV+DPWTRESRGFGFVTMST+
Sbjct: 41 DVENPGNNLYVTGLSPRITKRDLEKHFASEG-KVIDVHLVVDPWTRESRGFGFVTMSTLV 99
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD CIKY++RSVLEGRVITVEKA+RRR
Sbjct: 100 EADRCIKYLNRSVLEGRVITVEKAKRRR 127
>ref|XP_007016197.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508786560|gb|EOY33816.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 385
Score = 154 bits (390), Expect = 9e-35
Identities = 75/89 (84%), Positives = 83/89 (93%)
Frame = -3
Query: 269 IDVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTV 90
IDVENPGNNLYVTG SP ITKRELEKHF+SEG V+DVHLV+DPWTRESRGFGFVTM+T
Sbjct: 39 IDVENPGNNLYVTGLSPRITKRELEKHFASEGN-VIDVHLVVDPWTRESRGFGFVTMATN 97
Query: 89 EEADHCIKYMDRSVLEGRVITVEKARRRR 3
EEA+ CIKY++RSVLEGRVITVEKA+RRR
Sbjct: 98 EEAERCIKYLNRSVLEGRVITVEKAKRRR 126
>gb|AFK40884.1| unknown [Lotus japonicus]
Length = 344
Score = 154 bits (389), Expect = 1e-34
Identities = 73/88 (82%), Positives = 83/88 (94%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
DVENPGNNLYVTG SP ITKRELEKHF++EG KV+DVHLV+DPWTRESRGFGFVTM T+E
Sbjct: 42 DVENPGNNLYVTGLSPRITKRELEKHFATEG-KVIDVHLVVDPWTRESRGFGFVTMDTLE 100
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
+A+ C+KY++RSVLEGRVITVEKARRRR
Sbjct: 101 DANRCVKYLNRSVLEGRVITVEKARRRR 128
>ref|XP_004500218.1| PREDICTED: pre-mRNA-splicing factor cwc22-like [Cicer arietinum]
Length = 359
Score = 153 bits (386), Expect = 3e-34
Identities = 73/88 (82%), Positives = 80/88 (90%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
D ENPGNNLYVTG SP ITKRELEKHF++EG KV+DVHLV+DPWTR SRGFGFVTM T+E
Sbjct: 44 DAENPGNNLYVTGLSPRITKRELEKHFAAEG-KVIDVHLVVDPWTRASRGFGFVTMETLE 102
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD C+KY+DRSVLEGRVI VEKARRRR
Sbjct: 103 EADRCVKYLDRSVLEGRVIMVEKARRRR 130
>ref|XP_003551321.1| PREDICTED: pre-mRNA-splicing factor cwc22-like [Glycine max]
Length = 364
Score = 153 bits (386), Expect = 3e-34
Identities = 72/88 (81%), Positives = 82/88 (93%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
D ENPGNNLYVTG SP ITKRELEKHF++EG KV+DVHLV+DPWTRESRGFGFVTM T+E
Sbjct: 44 DAENPGNNLYVTGLSPRITKRELEKHFAAEG-KVIDVHLVVDPWTRESRGFGFVTMETLE 102
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EA+ C+KY++RSVLEGRVITVEKA+RRR
Sbjct: 103 EAERCVKYLNRSVLEGRVITVEKAKRRR 130
>ref|XP_007146720.1| hypothetical protein PHAVU_006G064000g [Phaseolus vulgaris]
gi|561019943|gb|ESW18714.1| hypothetical protein
PHAVU_006G064000g [Phaseolus vulgaris]
Length = 369
Score = 152 bits (385), Expect = 3e-34
Identities = 74/89 (83%), Positives = 81/89 (91%)
Frame = -3
Query: 269 IDVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTV 90
+D ENPGNNLYVTG SP ITKRELEKHF++EG KV DVHLV+DPWTRESRGFGFVTM TV
Sbjct: 45 LDAENPGNNLYVTGLSPRITKRELEKHFAAEG-KVRDVHLVVDPWTRESRGFGFVTMETV 103
Query: 89 EEADHCIKYMDRSVLEGRVITVEKARRRR 3
E AD C+KY++RSVLEGRVITVEKARRRR
Sbjct: 104 EVADRCVKYLNRSVLEGRVITVEKARRRR 132
>ref|XP_004294256.1| PREDICTED: uncharacterized protein LOC101294250 [Fragaria vesca
subsp. vesca]
Length = 363
Score = 152 bits (383), Expect = 6e-34
Identities = 74/87 (85%), Positives = 79/87 (90%)
Frame = -3
Query: 263 VENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVEE 84
VENPGNNLYVTG SP IT+RELEKHF+SEG KV+DVHLV+DPWTRESRGFGFVTM V
Sbjct: 47 VENPGNNLYVTGLSPRITRRELEKHFASEG-KVIDVHLVVDPWTRESRGFGFVTMENVNV 105
Query: 83 ADHCIKYMDRSVLEGRVITVEKARRRR 3
AD CIKY+DRSVLEGRVITVEKARRRR
Sbjct: 106 ADRCIKYLDRSVLEGRVITVEKARRRR 132
>ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246735 [Vitis vinifera]
Length = 330
Score = 152 bits (383), Expect = 6e-34
Identities = 75/88 (85%), Positives = 80/88 (90%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
+VENPGNNLYVTG S +TKRELEKHF+SEG V DVHLV DPWTRESRGFGFVTMSTVE
Sbjct: 43 EVENPGNNLYVTGLSTRVTKRELEKHFASEGS-VADVHLVTDPWTRESRGFGFVTMSTVE 101
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EA+ CIKY+DRSVLEGRVITVEKARRRR
Sbjct: 102 EANRCIKYLDRSVLEGRVITVEKARRRR 129
>emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera]
Length = 241
Score = 152 bits (383), Expect = 6e-34
Identities = 75/88 (85%), Positives = 80/88 (90%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
+VENPGNNLYVTG S +TKRELEKHF+SEG V DVHLV DPWTRESRGFGFVTMSTVE
Sbjct: 43 EVENPGNNLYVTGLSTRVTKRELEKHFASEGS-VADVHLVTDPWTRESRGFGFVTMSTVE 101
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EA+ CIKY+DRSVLEGRVITVEKARRRR
Sbjct: 102 EANRCIKYLDRSVLEGRVITVEKARRRR 129
>ref|XP_007016194.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508786557|gb|EOY33813.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 390
Score = 148 bits (374), Expect = 6e-33
Identities = 75/94 (79%), Positives = 83/94 (88%), Gaps = 5/94 (5%)
Frame = -3
Query: 269 IDVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTV 90
IDVENPGNNLYVTG SP ITKRELEKHF+SEG V+DVHLV+DPWTRESRGFGFVTM+T
Sbjct: 39 IDVENPGNNLYVTGLSPRITKRELEKHFASEGN-VIDVHLVVDPWTRESRGFGFVTMATN 97
Query: 89 EEADHCIKYMDRSVLEGRVITVEK-----ARRRR 3
EEA+ CIKY++RSVLEGRVITVEK A+RRR
Sbjct: 98 EEAERCIKYLNRSVLEGRVITVEKFLWQQAKRRR 131
>ref|XP_002299830.2| hypothetical protein POPTR_0001s25520g [Populus trichocarpa]
gi|550348160|gb|EEE84635.2| hypothetical protein
POPTR_0001s25520g [Populus trichocarpa]
Length = 344
Score = 148 bits (373), Expect = 8e-33
Identities = 73/88 (82%), Positives = 80/88 (90%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
DVENPGNNLYVTG SP ITK+ELEKHF++EG V+DVHLV+DP TRESRGFGFVTMS VE
Sbjct: 38 DVENPGNNLYVTGLSPRITKKELEKHFAAEG-TVIDVHLVVDPLTRESRGFGFVTMSAVE 96
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD CIKY+DRSVL GRVITVEKA+RRR
Sbjct: 97 EADRCIKYLDRSVLGGRVITVEKAKRRR 124
>ref|XP_006586189.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X2 [Glycine max]
gi|571474306|ref|XP_006586190.1| PREDICTED:
uncharacterized RNA-binding protein C25G10.01-like
isoform X3 [Glycine max]
Length = 143
Score = 147 bits (372), Expect = 1e-32
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
D ENPGNNLYVTG SP ITKRELEKHFS+EG KV+DVHLV+DPWTRESRGFGFVTM T+E
Sbjct: 42 DAENPGNNLYVTGLSPRITKRELEKHFSAEG-KVIDVHLVVDPWTRESRGFGFVTMETLE 100
Query: 86 EADHCIKYMDRSVLEGRVITVEK 18
EAD C+KY++RSVLEGRVITVEK
Sbjct: 101 EADRCVKYLNRSVLEGRVITVEK 123
>ref|XP_007016195.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|590588427|ref|XP_007016196.1| RNA-binding family
protein isoform 2 [Theobroma cacao]
gi|508786558|gb|EOY33814.1| RNA-binding family protein
isoform 2 [Theobroma cacao] gi|508786559|gb|EOY33815.1|
RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 131
Score = 147 bits (370), Expect = 2e-32
Identities = 72/89 (80%), Positives = 79/89 (88%)
Frame = -3
Query: 269 IDVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTV 90
IDVENPGNNLYVTG SP ITKRELEKHF+SEG V+DVHLV+DPWTRESRGFGFVTM+T
Sbjct: 39 IDVENPGNNLYVTGLSPRITKRELEKHFASEGN-VIDVHLVVDPWTRESRGFGFVTMATN 97
Query: 89 EEADHCIKYMDRSVLEGRVITVEKARRRR 3
EEA+ CIKY++RSVLEGRVITVEK R
Sbjct: 98 EEAERCIKYLNRSVLEGRVITVEKVNDLR 126
>gb|EAY89362.1| hypothetical protein OsI_10866 [Oryza sativa Indica Group]
Length = 324
Score = 144 bits (362), Expect = 2e-31
Identities = 69/88 (78%), Positives = 80/88 (90%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
DVENPGNNLYVTG S +T R+LEKHFS+EG +V+D +V+DPWTRESRGFGFVTM+TV+
Sbjct: 14 DVENPGNNLYVTGLSARVTDRDLEKHFSAEG-EVIDASIVLDPWTRESRGFGFVTMATVK 72
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD CIKY+DRSVLEGRVITVEKA+RRR
Sbjct: 73 EADLCIKYLDRSVLEGRVITVEKAKRRR 100
>gb|ABF95136.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 347
Score = 144 bits (362), Expect = 2e-31
Identities = 69/88 (78%), Positives = 80/88 (90%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
DVENPGNNLYVTG S +T R+LEKHFS+EG +V+D +V+DPWTRESRGFGFVTM+TV+
Sbjct: 37 DVENPGNNLYVTGLSARVTDRDLEKHFSAEG-EVIDASIVLDPWTRESRGFGFVTMATVK 95
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD CIKY+DRSVLEGRVITVEKA+RRR
Sbjct: 96 EADLCIKYLDRSVLEGRVITVEKAKRRR 123
>gb|ABF95135.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 346
Score = 144 bits (362), Expect = 2e-31
Identities = 69/88 (78%), Positives = 80/88 (90%)
Frame = -3
Query: 266 DVENPGNNLYVTGFSPWITKRELEKHFSSEGGKVVDVHLVIDPWTRESRGFGFVTMSTVE 87
DVENPGNNLYVTG S +T R+LEKHFS+EG +V+D +V+DPWTRESRGFGFVTM+TV+
Sbjct: 36 DVENPGNNLYVTGLSARVTDRDLEKHFSAEG-EVIDASIVLDPWTRESRGFGFVTMATVK 94
Query: 86 EADHCIKYMDRSVLEGRVITVEKARRRR 3
EAD CIKY+DRSVLEGRVITVEKA+RRR
Sbjct: 95 EADLCIKYLDRSVLEGRVITVEKAKRRR 122