BLASTX nr result

ID: Sinomenium21_contig00004913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00004913
         (1848 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69966.1| hypothetical protein VITISV_039411 [Vitis vinifera]   106   1e-24
emb|CAN64612.1| hypothetical protein VITISV_030849 [Vitis vinifera]    87   6e-17
emb|CAN76275.1| hypothetical protein VITISV_032227 [Vitis vinifera]    73   2e-13

>emb|CAN69966.1| hypothetical protein VITISV_039411 [Vitis vinifera]
          Length = 825

 Score =  106 bits (265), Expect(2) = 1e-24
 Identities = 48/82 (58%), Positives = 60/82 (73%)
 Frame = +1

Query: 1513 GETLLDCTWI*NDEFQLLNHDLYDRFHVFNSSGSSFPKSRGIEVDKWQQPTKVYHKHGKM 1692
            G  L  CTWI + EFQ LN D Y+RFHVFNSS SSFP+S  ++ DKWQ P KVY +   +
Sbjct: 744  GRLLSYCTWITDGEFQHLNQDFYERFHVFNSSRSSFPRSGRVDRDKWQPPLKVYQRRKGV 803

Query: 1693 NSKAQILIWNSLDDGGTTWNIL 1758
            +SKAQ LIW+SLDD G +WN++
Sbjct: 804  DSKAQALIWHSLDDNGLSWNLI 825



 Score = 35.8 bits (81), Expect(2) = 1e-24
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 1472 TRGGGYKKYLVKWKGR 1519
            TRGGGY+KY VKW+GR
Sbjct: 730  TRGGGYQKYFVKWRGR 745


>emb|CAN64612.1| hypothetical protein VITISV_030849 [Vitis vinifera]
          Length = 569

 Score = 87.4 bits (215), Expect(2) = 6e-17
 Identities = 43/76 (56%), Positives = 54/76 (71%)
 Frame = +1

Query: 1513 GETLLDCTWI*NDEFQLLNHDLYDRFHVFNSSGSSFPKSRGIEVDKWQQPTKVYHKHGKM 1692
            G  L +CTWI N EFQ  N DLY+RFHVFN S SSFPKS G++ DK + P KVY +   +
Sbjct: 492  GRLLSNCTWITNGEFQYSNQDLYERFHVFNLSRSSFPKSGGVDGDKRKPPLKVYQRCKGV 551

Query: 1693 NSKAQILIWNSLDDGG 1740
            +SKA+ LI +SL+D G
Sbjct: 552  DSKARTLIQHSLNDNG 567



 Score = 28.9 bits (63), Expect(2) = 6e-17
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +2

Query: 1484 GYKKYLVKWKGR 1519
            GY+KYLVKW+GR
Sbjct: 482  GYQKYLVKWRGR 493


>emb|CAN76275.1| hypothetical protein VITISV_032227 [Vitis vinifera]
          Length = 268

 Score = 72.8 bits (177), Expect(2) = 2e-13
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +1

Query: 1510 EGETLLDCTWI*NDEFQLLNHDLYDRFHVFNSSGSSFPKSRGIEVDKWQQPTK 1668
            +G  L+DCTWI   EFQ LN DLY+RFH FNSS  SFPKS  ++ DKWQ P K
Sbjct: 65   KGRPLIDCTWITYGEFQDLNQDLYERFHAFNSSRFSFPKSGRVDRDKWQPPLK 117



 Score = 31.6 bits (70), Expect(2) = 2e-13
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +2

Query: 1472 TRGGGYKKYLVKWKGR 1519
            TR  GY+KY+VKWKGR
Sbjct: 52   TRERGYQKYIVKWKGR 67


Top