BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00004375
         (1070 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ...   364   3e-98
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   363   5e-98
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   360   4e-97
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   359   9e-97
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   357   5e-96
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   357   6e-96
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   355   2e-95
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   355   2e-95
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   352   1e-94
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   350   4e-94
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun...   346   8e-93
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   342   2e-91
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...   341   3e-91
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   337   5e-90
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   337   7e-90
ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854...   329   1e-87
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   327   4e-87
ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein...   325   2e-86
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein...   322   1e-85
ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like ...   322   2e-85

>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|590624750|ref|XP_007025692.1| PAF1 complex component
            isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
            PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  364 bits (935), Expect = 3e-98
 Identities = 194/285 (68%), Positives = 222/285 (77%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  MPSK +VLEK+EA+QKA T+VYSAATVKQML EKKS S+RPLN+AAEK RLR
Sbjct: 381  ELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQEKKSTSSRPLNIAAEKDRLR 440

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            RDLEIAQS+ D  EVERI+ RLQ+LE  SR ++EKD+KA RL EMN++NRAENFKNASEL
Sbjct: 441  RDLEIAQSKHDEAEVERIKMRLQQLEA-SRQAQEKDAKAVRLAEMNRKNRAENFKNASEL 499

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            KPVNT LKAGEAGYDPFSRRWTRSRNYYV      D A A ANGD   ++      NG +
Sbjct: 500  KPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAA-AVANGDRIGVIASG---NGND 555

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            A   +E G              GKLVDTSAPVD GTESN LH+FE+ ISL  LQ+FGGPQ
Sbjct: 556  ARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHDFEIPISLNALQRFGGPQ 615

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GA  GFMARKQ++EATVGC VPE+DGRRH LTLTVSDYKRRRGLL
Sbjct: 616  GAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  363 bits (933), Expect = 5e-98
 Identities = 197/287 (68%), Positives = 224/287 (78%), Gaps = 2/287 (0%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            +++++G  MPSK +VLEK++AIQKAIT+VYSAATVKQML EKKSASTRPLNVAAEK RLR
Sbjct: 377  EVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLR 436

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LEIAQS+ D  EVERI+ RL ELE  SR +K+KD+KA +L EMN++NR ENFKNASE+
Sbjct: 437  RELEIAQSKYDEAEVERIKTRLLELEA-SRQAKQKDAKALKLAEMNRKNRFENFKNASEM 495

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYV--PNDDSGDGANAPANGDVASLLTGPGGRNG 536
            KPVNT LKAGEAGYDPFSRRWTRSRNYY   P + +  G N+  NG+VA       G NG
Sbjct: 496  KPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNS-VNGNVAG-----AGSNG 549

Query: 537  ANADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGG 716
              A V +E G+             GKLVDTSAPVD GTESN LHNFEL ISLA LQKFGG
Sbjct: 550  TGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKFGG 609

Query: 717  PQGAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
             QGAQ GFMARKQK+EATVG  V E+DGRRH LTLTVSDYKRRRGLL
Sbjct: 610  AQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  360 bits (925), Expect = 4e-97
 Identities = 191/285 (67%), Positives = 219/285 (76%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E+ G  MPSK +VLEK+E+IQK  T+VYSAATVKQML EKKSAS+RPLNVAAEK RLR
Sbjct: 366  EVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLR 425

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LE+AQSR D  ++ERI+ RLQELE  SRDSK KD+KA RL EMN++NR ENFKNASEL
Sbjct: 426  RELEVAQSRHDDVDMERIKKRLQELEA-SRDSKVKDAKAIRLAEMNRKNRVENFKNASEL 484

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            K VNTSLKAGEAGYDPFSRRWTRSRNYY+     G+   A ANGD   +  G  G  GA 
Sbjct: 485  KRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP--GEEVTAEANGDKNGVPGGANGEEGAT 542

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
             +V    G+             GKLVDT+AP+DLGTESN LH+FEL ISL  L+KFGGPQ
Sbjct: 543  GEV----GMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQ 598

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            G   GFMARKQ++EATVGC VPE+DGRRH LTLTV DYKRRRGLL
Sbjct: 599  GVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  359 bits (922), Expect = 9e-97
 Identities = 194/285 (68%), Positives = 225/285 (78%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            +++++G  MP+K +VLEK++AIQKAIT+VYSAATVKQML EKKSASTRPLNVAAEK RLR
Sbjct: 378  EVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLR 437

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LEIAQS+ D  EV+RI+ARLQELE  SR +K+KD+KA +L EMN++NR ENFKNASEL
Sbjct: 438  RELEIAQSKHDEAEVDRIKARLQELEA-SRHAKQKDAKALKLAEMNRKNRFENFKNASEL 496

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            KPVNT LKAGEAGYDPFSRRWTRSRNYY     +G+ A A  N  V  ++ GPG  N   
Sbjct: 497  KPVNTGLKAGEAGYDPFSRRWTRSRNYY-----TGEKA-AAGNNSVNGIVAGPG-TNSTG 549

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            A V +E GL             GKLVDTSAPVD GTESN LHNFEL ISLA LQK+GG Q
Sbjct: 550  APVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKYGGAQ 609

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GAQ GFMARKQ++E+TVG  V E+DGRRH LTL+VSDYKRRRGLL
Sbjct: 610  GAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  357 bits (916), Expect = 5e-96
 Identities = 188/285 (65%), Positives = 223/285 (78%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  MP+K ++LEK+EAI+K+ T+VYSAATVKQML EKKSAS+RPLNVAAEK RLR
Sbjct: 379  EVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLR 438

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LE+AQS++D  EVERI+AR+QELE  SR ++ KD+KA RL EMN++NRAENF+NASEL
Sbjct: 439  RELEVAQSKQDDAEVERIRARIQELEA-SRQTQGKDAKAIRLAEMNRKNRAENFRNASEL 497

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            KPVNTSLKAGEAGYDPFSRRWTRSRNYYV     GD A A  N   AS       +  + 
Sbjct: 498  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATNNE--ASGTVAVANKTESA 555

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            A V +E G+             GKLVDT+APVD GTESN+LHNFEL ISL  LQKFGG Q
Sbjct: 556  AGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNFELPISLTALQKFGGAQ 615

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GAQ GFMARKQ++EAT+GC V E+D +RH LTLTVSDYKRRRGLL
Sbjct: 616  GAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGLL 660


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  357 bits (915), Expect = 6e-96
 Identities = 189/285 (66%), Positives = 218/285 (76%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E+    MPSK +VLEK+++IQK  T+VYSAATVKQML EKKSAS+RPLNVAAEK RLR
Sbjct: 366  EVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLR 425

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LE+AQSR D  ++ERI+ RLQELE  SRDSK KD+KA RL EMN++NR ENFKNASEL
Sbjct: 426  RELEVAQSRHDEVDMERIKKRLQELEA-SRDSKVKDAKAIRLAEMNRKNRVENFKNASEL 484

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            K VNTSLKAGEAGYDPFSRRWTRSRNYY+     G+   A ANGD   +  G  G  GA 
Sbjct: 485  KRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP--GEEVTAEANGDKNGVPGGANGEEGAT 542

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
             +V    G+             GKLVDT+AP+DLGTESN LH+FEL ISL  L+KFGGPQ
Sbjct: 543  GEV----GMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQ 598

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            G   GFMARKQ++EATVGC VPE+DGRRH LTLTV DYKRRRGLL
Sbjct: 599  GVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  355 bits (911), Expect = 2e-95
 Identities = 188/285 (65%), Positives = 217/285 (76%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            + E+ G  +PSK ++LEK+EAI+K+ T+VYSAATVKQML EKKSAS+RPLNVAAEK RLR
Sbjct: 382  EAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLR 441

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LEIAQSR D  EVERI+AR+ ELE  SR +K KD+KA RL EMN++NR ENF+NASEL
Sbjct: 442  RELEIAQSRHDEAEVERIEARILELEA-SRQAKVKDAKALRLAEMNRKNRVENFRNASEL 500

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            KP+NT LKAGEAGYDPFSRRWTRSRNYYV N   GD A A +N + A+        +   
Sbjct: 501  KPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGDDAVAASNSE-ANDTAAVADSDHVV 559

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            A  MSE G+             GKLVDTSAPVD GTESN++HNFEL ISL  LQKF GPQ
Sbjct: 560  AGAMSESGVAATAAALDAAADAGKLVDTSAPVDQGTESNTMHNFELEISLIALQKFRGPQ 619

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GA  GFMARKQ++EA VGC V E+DGRRH LTLTV DYKRRRGLL
Sbjct: 620  GAHAGFMARKQRIEANVGCQVRENDGRRHALTLTVGDYKRRRGLL 664


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  355 bits (910), Expect = 2e-95
 Identities = 193/287 (67%), Positives = 220/287 (76%), Gaps = 2/287 (0%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            +++ +G  MPSK +VLEK++AIQKAIT+VYSAATVKQML EKKSASTRPLNVAAEK RLR
Sbjct: 377  EVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLR 436

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LEIAQS+ D  EVERI+ RLQELE  SR +K+KD+KA +L EMN++NR ENFKNASEL
Sbjct: 437  RELEIAQSKHDEAEVERIKTRLQELEA-SRQAKQKDAKALKLAEMNRKNRFENFKNASEL 495

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYV--PNDDSGDGANAPANGDVASLLTGPGGRNG 536
            KPVN  LKAGEAGYDPFSRRWTRSRNYY   P + +  G N   NG+VA       G N 
Sbjct: 496  KPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNI-VNGNVAG-----AGSNA 549

Query: 537  ANADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGG 716
              A V +E G+             GKLVDTSAPVD GTESN LHNFEL ISLA LQK+GG
Sbjct: 550  TGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKYGG 609

Query: 717  PQGAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
              GAQ GFMARKQ++E+TVG  V E+DGRRH LTLTVSDYKRRRGLL
Sbjct: 610  APGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  352 bits (904), Expect = 1e-94
 Identities = 187/285 (65%), Positives = 217/285 (76%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E  G  +PSK ++LEK+EAI+K+ T+VYSAATVKQML EKKSAS+RPLNVAAEK RLR
Sbjct: 380  EVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLR 439

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LEIAQS+ D  EVERI AR++ELE  SR +K KD+KA RL EMN++NR ENF+NASE+
Sbjct: 440  RELEIAQSKHDEAEVERINARIEELEA-SRHAKVKDAKAIRLAEMNRKNRVENFRNASEM 498

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            KPVNT LKAGEAGYDPFSRRWTRSRNYYV      D   A    + A+        N   
Sbjct: 499  KPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVATKISE-ANETVAVAASNQVV 557

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            A VMSE G+             GKLVDTSAPVD GTESN++H+FEL ISL  LQ+FGGPQ
Sbjct: 558  AGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTMHSFELEISLIALQEFGGPQ 617

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GAQ GFMARKQ++EATVGC VPE+DGRRH LTLTV DYKRRRGLL
Sbjct: 618  GAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 662


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  350 bits (899), Expect = 4e-94
 Identities = 189/288 (65%), Positives = 223/288 (77%), Gaps = 3/288 (1%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  MP+K+++L+K+E+I+K  T+VYSAATVKQML EKKSAS RPLN+A EK RLR
Sbjct: 377  EVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQEKKSASARPLNIALEKDRLR 436

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LE+AQS+ D  EV+RI+ RLQELE  SR +K+ D+KA RL EMN++NR ENFKNASEL
Sbjct: 437  RELEVAQSKNDEVEVDRIKTRLQELEA-SRKAKQTDAKAIRLAEMNRKNRVENFKNASEL 495

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYV--PNDDSGD-GANAPANGDVASLLTGPGGRN 533
            KPVNT LKAGEAGYDPFSRRWTRSRNYYV  P +   D GANA  NG  AS      GR+
Sbjct: 496  KPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGANAGNNG--ASTDAENNGRH 553

Query: 534  GANADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFG 713
            G    V +E G+             GKLVDT+APVD GT SN LHNFEL ISL+ LQKFG
Sbjct: 554  GI---VAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHNFELPISLSVLQKFG 610

Query: 714  GPQGAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GPQGAQ GFMARKQ++EATVGC VPE+DGRRH LTL+V DYKRRRGLL
Sbjct: 611  GPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
            gi|462413781|gb|EMJ18830.1| hypothetical protein
            PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  346 bits (888), Expect = 8e-93
 Identities = 185/288 (64%), Positives = 218/288 (75%), Gaps = 3/288 (1%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  +PSK +VLEK+EAI+K  T+VYSAATVKQM+ EKKSAS+RPLN+A EK RLR
Sbjct: 365  EVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRPLNIALEKDRLR 424

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LE+AQS+ D  EVERI+ RLQ+LE   R S+ KDSKA RL EMN++NR ENFKNASEL
Sbjct: 425  RELEVAQSKHDDAEVERIKTRLQQLEA-RRQSQGKDSKAVRLAEMNRKNRVENFKNASEL 483

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYV--PNDDSGDG-ANAPANGDVASLLTGPGGRN 533
            KPV T LKAGEAGYDPFSRRWTRSRNYYV  P +  G+  A   A+G +A + +     N
Sbjct: 484  KPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALADIES-----N 538

Query: 534  GANADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFG 713
            G         G+             GKL+DTSAPVD GTESN +HNFEL ISLA LQKFG
Sbjct: 539  GTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLATLQKFG 598

Query: 714  GPQGAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GPQGAQ GF+ARKQ++EATVGC VPE+DGRRH LTLTVSDYKRR GLL
Sbjct: 599  GPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 658

 Score =  342 bits (876), Expect = 2e-91
 Identities = 182/285 (63%), Positives = 214/285 (75%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  MP+K +VLEK++AIQK IT+VYSA TVKQML EKKS+S+RPLNVAAEK RLR
Sbjct: 379  EVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQMLQEKKSSSSRPLNVAAEKDRLR 438

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R++EIAQS+ D  EVERI+ R+QELE  SR +K KD+KA +L EMN++NR ENFKNASEL
Sbjct: 439  REMEIAQSKNDEAEVERIKTRVQELEA-SRHAKVKDAKALKLAEMNRKNRFENFKNASEL 497

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            +PVN  LKAGEAGYDPFSRRWTRSRNYYV       G  A A  +  ++L    G N   
Sbjct: 498  RPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKP----GEKAAARKNTTNVLVADAGSNITG 553

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
              V +E G+             GKLVDTSAPVD GTESN LHNFEL ISLA L K+GG Q
Sbjct: 554  VPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESNFLHNFELPISLALLHKYGGAQ 613

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GAQ GFMARKQ++EATVG  V E+DGRRH LTL+V DYKRRRGLL
Sbjct: 614  GAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYKRRRGLL 658


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 657

 Score =  341 bits (874), Expect = 3e-91
 Identities = 186/288 (64%), Positives = 214/288 (74%), Gaps = 3/288 (1%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++EK G  +PSK +VLEK+EAI+K  T+VYSA TVKQM+ EKKSAS+RPLN+A EK RLR
Sbjct: 376  EVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAKTVKQMIQEKKSASSRPLNIALEKDRLR 435

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LEIAQS+ D  EVERI+ARL++LE   + S+ KDSKA RL EMN++NR +NFKNAS L
Sbjct: 436  RELEIAQSKHDDAEVERIKARLEQLEA-RQQSQGKDSKAVRLAEMNRKNRVDNFKNASGL 494

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYV--PNDDSGDG-ANAPANGDVASLLTGPGGRN 533
            KPV T LKAGEAGYDPFSRRWTRSRNYYV  P++   D  ANA A   +A + T     N
Sbjct: 495  KPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDEQKDDAEANAVAAESLAEVET-----N 549

Query: 534  GANADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFG 713
            G    V    GL             GKL+DT APVD GT SN LHNFEL ISLA LQKFG
Sbjct: 550  GTGGVVAVRAGLEATAAALEAAAGAGKLIDTMAPVDQGTSSNPLHNFELPISLATLQKFG 609

Query: 714  GPQGAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GPQGAQ GFMARKQ++EATVG  VPE DGRRH LTL+VSDYKRRRGLL
Sbjct: 610  GPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 657


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
            [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  337 bits (864), Expect = 5e-90
 Identities = 181/285 (63%), Positives = 213/285 (74%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  MPSK +VLEK+EAIQK+ T+VYSA TVKQML +KKSA+ RPLNVAAEK RLR
Sbjct: 372  EVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDRLR 431

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            RD+E+A+ + D  EVERI+ARLQELE  SR  +EKD KA RL EMN++NR ENFKNASEL
Sbjct: 432  RDMEVAKMKNDEAEVERIKARLQELED-SRKVQEKDDKARRLAEMNRKNRVENFKNASEL 490

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            +PVN  LKAGEAGYDPFSRRWTRS NY+     +G+ A A      A+L        G  
Sbjct: 491  RPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAAAA------AALAAEDNNGAGGT 544

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            AD     G+             GKLVDT+APVD GTESN+LH+F+L ISLA LQKFGG Q
Sbjct: 545  AD----GGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQ 600

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            G Q GFMARKQ++EATVGC VPE+DGRRH LTL+VSDYKRRRGLL
Sbjct: 601  GGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  337 bits (863), Expect = 7e-90
 Identities = 179/286 (62%), Positives = 218/286 (76%), Gaps = 1/286 (0%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  MPSK +VLEK+EAIQK+ T+VYSA TVKQML +KKSA+ RPLNVAAEK RLR
Sbjct: 372  EVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDRLR 431

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            RD+E+A+ + D  EVERI+ARLQEL+  SR  +EKD KA RL EMN++NR ENFKNASEL
Sbjct: 432  RDMEVAKMKNDEAEVERIKARLQELDD-SRKVQEKDDKARRLAEMNRKNRVENFKNASEL 490

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLT-GPGGRNGA 539
            +PVN  LKAG+AGYDPFSRRWTRS NY+     + + A   +NG+VA+         NGA
Sbjct: 491  RPVNQLLKAGQAGYDPFSRRWTRSTNYFAKG--ANEEAEGASNGEVAAAAALAAEDNNGA 548

Query: 540  NADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGP 719
            +    ++ G+             GKLVDT+APVD GTESN+LH+F+L ISLA LQKFGG 
Sbjct: 549  SGT--ADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGS 606

Query: 720  QGAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            QG Q GFMARKQ++EATVGC VPE+DGRRH LTL+VSDYKRRRGLL
Sbjct: 607  QGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
          Length = 493

 Score =  329 bits (843), Expect = 1e-87
 Identities = 177/260 (68%), Positives = 197/260 (75%), Gaps = 2/260 (0%)
 Frame = +3

Query: 84   YVYSAATVKQMLHEKKSASTRPLNVAAEKARLRRDLEIAQSRRDGPEVERIQARLQELET 263
            +VYSAAT KQML EKKS S+RPLN+ AEK RLRR++E+A S+ D  EVERI  RLQ+LE 
Sbjct: 239  FVYSAATGKQMLQEKKSVSSRPLNIVAEKDRLRREMEVALSKHDQAEVERINTRLQQLEA 298

Query: 264  ISRDSKEKDSKAFRLEEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNY 443
             SR SKEKD+KA RL EMN++NRAENFKNASE K VNTSLKAGEAGYDPFSRRWTRSRNY
Sbjct: 299  -SRRSKEKDAKAIRLAEMNRKNRAENFKNASESKRVNTSLKAGEAGYDPFSRRWTRSRNY 357

Query: 444  YVPNDDSGDGANAPANGDVASLLTGPG--GRNGANADVMSEDGLXXXXXXXXXXXXXGKL 617
            YV     GD A A ANG+  +   G G  G  G  A+V    G+             GKL
Sbjct: 358  YVSKPGGGDEAAAVANGEAPAAFVGAGSNGTGGKGAEV----GVAATAAALEAAADAGKL 413

Query: 618  VDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQGAQLGFMARKQKVEATVGCCVPESD 797
            VDTSAPVD GTESN+LH+FEL ISLA LQKFGGPQGA  GFMARKQ++EATVGC VPE+D
Sbjct: 414  VDTSAPVDQGTESNTLHDFELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPEND 473

Query: 798  GRRHPLTLTVSDYKRRRGLL 857
            GRRH LTLTV DYKRRRGLL
Sbjct: 474  GRRHALTLTVGDYKRRRGLL 493


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  327 bits (839), Expect = 4e-87
 Identities = 181/287 (63%), Positives = 211/287 (73%), Gaps = 2/287 (0%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E+TG  M SK ++LEK+EAIQK   +VYSAATVKQML +KKSAS RPLN+AAEK RLR
Sbjct: 380  EVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQDKKSASARPLNIAAEKDRLR 439

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R++++A S+ D  EVERI+ RLQ+LE  SR  + KD+KA RL EMN++NR ENFKNASEL
Sbjct: 440  REMDVAVSKNDEAEVERIKTRLQQLEA-SRRLQMKDAKAIRLAEMNRKNRVENFKNASEL 498

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGA-NAPANGD-VASLLTGPGGRNG 536
            +P+   LKAGEAGYDPFSRRWTRSRNYYV N    +GA  A  N D V   L       G
Sbjct: 499  RPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAGNSDNVTPALENTRTEAG 557

Query: 537  ANADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGG 716
              +D     G+             GKLVDT+APVD GTESNSLHNFEL ISLA LQKFGG
Sbjct: 558  GTSDA----GMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAMLQKFGG 613

Query: 717  PQGAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
              GAQ GF+ARKQ++EATVG  VPE+DGRRH LTLTVSDYKRRRGLL
Sbjct: 614  ALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 679

 Score =  325 bits (834), Expect = 2e-86
 Identities = 174/285 (61%), Positives = 209/285 (73%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            +++++  +MPSK++VLEK+E +QK+ T+VYSA TVKQML EK+ AS RP+N+A EK RLR
Sbjct: 398  EVKRSAGYMPSKHDVLEKRETLQKSNTFVYSATTVKQMLQEKR-ASARPVNIAVEKDRLR 456

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R LE+A+S+ D  EV RI+ RLQELE  SR S+EKDSKA RL EMN++NR ENFKNAS L
Sbjct: 457  RQLEVAESKHDMEEVGRIKTRLQELEA-SRQSQEKDSKAIRLAEMNRKNRFENFKNASGL 515

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            KP+NT+LKAGEAGYDPFSRRWTRSRNYYV     GD A      + A+   G    + A 
Sbjct: 516  KPINTNLKAGEAGYDPFSRRWTRSRNYYVGKPGGGDEAAEDETAEAANGFLG-ASNDKAE 574

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            A VM E G+             GKLVDT APVD  TE+ +LHNFEL ISLA LQKFGGP 
Sbjct: 575  AKVMGEFGVKATAAALEAAAGAGKLVDTRAPVDQATEAYTLHNFELPISLAGLQKFGGPH 634

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            GA   + ARKQK+EAT+G  VPE DG+RH LTL+VSDYKRRRGLL
Sbjct: 635  GAPAAYSARKQKIEATLGYKVPEDDGKRHALTLSVSDYKRRRGLL 679


>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 653

 Score =  322 bits (826), Expect = 1e-85
 Identities = 173/285 (60%), Positives = 205/285 (71%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  M  K +V+EK +AIQK  ++VYSAATVKQM+ EKKS S RPLNVAAEK RL+
Sbjct: 374  EVERSGGRMLMKLDVMEKNQAIQKINSFVYSAATVKQMIEEKKSNSRRPLNVAAEKDRLK 433

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R LEIA+S++D  EVE+I+ RLQELE  SR ++ KD+KA RL EMN++NR ENFKNASEL
Sbjct: 434  RQLEIAESKKDAAEVEKIKTRLQELEA-SRKTQAKDAKALRLSEMNRKNRFENFKNASEL 492

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            KPVN  LKAGEAGYDPFSRRWTRSRNYY    ++     A A  + +    G  G NG  
Sbjct: 493  KPVNKGLKAGEAGYDPFSRRWTRSRNYY----NAKQAEEAAAGNNSSGGAVGDRGSNGVG 548

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            A V  E G+             GKLVDT APVD GTESN LHNFEL ISL  LQKFGG Q
Sbjct: 549  ATVAGEAGVVATAEALEAAADAGKLVDTRAPVDQGTESNFLHNFELPISLTILQKFGGAQ 608

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            G   GF+A+KQ++E  VG  VPE+DG+ H LTLTVSDYKRRRGLL
Sbjct: 609  GVHAGFIAKKQRIEEIVGFRVPENDGKSHMLTLTVSDYKRRRGLL 653


>ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like protein [Medicago
            truncatula] gi|355500443|gb|AES81646.1| RNA
            polymerase-associated protein RTF1-like protein [Medicago
            truncatula]
          Length = 624

 Score =  322 bits (824), Expect = 2e-85
 Identities = 174/285 (61%), Positives = 207/285 (72%)
 Frame = +3

Query: 3    QMEKTGAHMPSKNEVLEKQEAIQKAITYVYSAATVKQMLHEKKSASTRPLNVAAEKARLR 182
            ++E++G  M  + +V+EK++A+ K   +VYSAATVKQML EKKS S RPLNVAAEK RL+
Sbjct: 351  EVERSGGRMLKRLDVVEKKQAMLKINNFVYSAATVKQMLEEKKSISRRPLNVAAEKDRLK 410

Query: 183  RDLEIAQSRRDGPEVERIQARLQELETISRDSKEKDSKAFRLEEMNKRNRAENFKNASEL 362
            R+LEIA+S+ D   VE+IQ +LQELE  SR S+EKD+KA RL EMN++NR ENFKNAS+L
Sbjct: 411  RELEIAESKNDAAGVEKIQTKLQELEE-SRKSREKDAKALRLSEMNRKNRVENFKNASDL 469

Query: 363  KPVNTSLKAGEAGYDPFSRRWTRSRNYYVPNDDSGDGANAPANGDVASLLTGPGGRNGAN 542
            KPVN +LKAGEAGYDPFSRRWTRSRNYY    +S     A A  + +    G GG NG  
Sbjct: 470  KPVNKALKAGEAGYDPFSRRWTRSRNYY----NSKPAEEATAGNNTSGGAVGDGGSNGIG 525

Query: 543  ADVMSEDGLXXXXXXXXXXXXXGKLVDTSAPVDLGTESNSLHNFELSISLAELQKFGGPQ 722
            A      G+             GKLVDT APVD GTESN LH+FEL ISLA LQKFGG +
Sbjct: 526  A------GMAATTEALEAAAGAGKLVDTRAPVDEGTESNVLHDFELPISLAMLQKFGGAK 579

Query: 723  GAQLGFMARKQKVEATVGCCVPESDGRRHPLTLTVSDYKRRRGLL 857
            G Q GFMA+KQ++E  VG  VPE+DGRRH LTLTVSDYKRRRGLL
Sbjct: 580  GVQAGFMAKKQRIEEVVGFRVPENDGRRHQLTLTVSDYKRRRGLL 624