BLASTX nr result
ID: Sinomenium21_contig00004034
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00004034
(464 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-... 102 4e-20
ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-... 102 4e-20
ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-... 102 4e-20
ref|XP_004235904.1| PREDICTED: COBW domain-containing protein 2-... 98 1e-18
ref|XP_007023311.1| Plastid transcriptionally active 17 isoform ... 97 2e-18
ref|XP_007215384.1| hypothetical protein PRUPE_ppa005748mg [Prun... 97 2e-18
ref|XP_007023312.1| Plastid transcriptionally active 17 isoform ... 95 9e-18
ref|XP_006341395.1| PREDICTED: COBW domain-containing protein 1-... 93 4e-17
ref|XP_006389800.1| hypothetical protein EUTSA_v10018560mg [Eutr... 91 1e-16
gb|EXB67238.1| hypothetical protein L484_025717 [Morus notabilis] 91 2e-16
ref|XP_006427459.1| hypothetical protein CICLE_v10025584mg [Citr... 91 2e-16
ref|XP_006492106.1| PREDICTED: COBW domain-containing protein 1-... 89 5e-16
ref|XP_006492104.1| PREDICTED: COBW domain-containing protein 1-... 89 5e-16
gb|EYU26999.1| hypothetical protein MIMGU_mgv1a022575mg [Mimulus... 89 8e-16
gb|EYU21681.1| hypothetical protein MIMGU_mgv1a0059061mg, partia... 89 8e-16
ref|XP_003556540.1| PREDICTED: COBW domain-containing protein 1-... 89 8e-16
ref|XP_004303270.1| PREDICTED: COBW domain-containing protein 1-... 88 1e-15
ref|XP_003536775.1| PREDICTED: COBW domain-containing protein 1 ... 87 2e-15
ref|XP_006302247.1| hypothetical protein CARUB_v10020280mg [Caps... 86 4e-15
ref|NP_178163.1| protein plastid transcriptionally active 17 [Ar... 86 4e-15
>ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-like isoform 3 [Vitis
vinifera]
Length = 426
Score = 102 bits (255), Expect = 4e-20
Identities = 67/122 (54%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Frame = -2
Query: 346 TLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYSNLRTSSIDV---RLVS---- 188
+LDLATTF+ AS PR V+ + PLLWR +A +L S V R+V+
Sbjct: 5 SLDLATTFLTF----ASRPR--VRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVAGV 58
Query: 187 SSLASKGRVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAE 8
SS + R R T SE SDV TKIPPDDRIPATIITGFLGSGKTTLLNHILTA+
Sbjct: 59 SSKPQRDRRRFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTAD 118
Query: 7 HG 2
HG
Sbjct: 119 HG 120
>ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Vitis
vinifera]
Length = 437
Score = 102 bits (255), Expect = 4e-20
Identities = 67/122 (54%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Frame = -2
Query: 346 TLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYSNLRTSSIDV---RLVS---- 188
+LDLATTF+ AS PR V+ + PLLWR +A +L S V R+V+
Sbjct: 5 SLDLATTFLTF----ASRPR--VRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVAGV 58
Query: 187 SSLASKGRVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAE 8
SS + R R T SE SDV TKIPPDDRIPATIITGFLGSGKTTLLNHILTA+
Sbjct: 59 SSKPQRDRRRFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTAD 118
Query: 7 HG 2
HG
Sbjct: 119 HG 120
>ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Vitis
vinifera] gi|297743555|emb|CBI36422.3| unnamed protein
product [Vitis vinifera]
Length = 455
Score = 102 bits (255), Expect = 4e-20
Identities = 67/122 (54%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Frame = -2
Query: 346 TLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYSNLRTSSIDV---RLVS---- 188
+LDLATTF+ AS PR V+ + PLLWR +A +L S V R+V+
Sbjct: 5 SLDLATTFLTF----ASRPR--VRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVAGV 58
Query: 187 SSLASKGRVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAE 8
SS + R R T SE SDV TKIPPDDRIPATIITGFLGSGKTTLLNHILTA+
Sbjct: 59 SSKPQRDRRRFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTAD 118
Query: 7 HG 2
HG
Sbjct: 119 HG 120
>ref|XP_004235904.1| PREDICTED: COBW domain-containing protein 2-like [Solanum
lycopersicum]
Length = 459
Score = 97.8 bits (242), Expect = 1e-18
Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 8/123 (6%)
Frame = -2
Query: 346 TLDLATTFVGLLKRQASMPRLQ-VQAAAFPLLWRNRARSYSNLRTSSIDVRLVSSSLASK 170
++D+ATTF+GL KRQ P+ ++ A FP LW+ +L TSS +S ++ +
Sbjct: 5 SIDIATTFMGLAKRQT--PQFYGLRTAVFPTLWKTSKCQRFSLSTSSSS--RISVAINTS 60
Query: 169 GRVRRFXXXXXXT-------DSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTA 11
+ RF + SE SD+ TKIP D+RIPATIITGFLGSGKTTLLNHILTA
Sbjct: 61 SKPNRFSRGFTVSATSTSAPQSEDSDILTKIPQDNRIPATIITGFLGSGKTTLLNHILTA 120
Query: 10 EHG 2
+HG
Sbjct: 121 DHG 123
>ref|XP_007023311.1| Plastid transcriptionally active 17 isoform 1 [Theobroma cacao]
gi|508778677|gb|EOY25933.1| Plastid transcriptionally
active 17 isoform 1 [Theobroma cacao]
Length = 466
Score = 97.4 bits (241), Expect = 2e-18
Identities = 63/130 (48%), Positives = 79/130 (60%), Gaps = 13/130 (10%)
Frame = -2
Query: 352 MATL--DLATTFVGLLKR-----QASMPRLQVQAAAFPLLWRN---RARSYSNLRTSSID 203
MATL D+ATTF + R + P ++ PL ++ + + S+ TSS+
Sbjct: 1 MATLSMDIATTFFNITTRCCGHHHRTPPLSGIRTTLLPLFFKPTTIKTQPLSSKTTSSLP 60
Query: 202 VRLVSSSLASKGRVRRFXXXXXXT---DSEASDVSTKIPPDDRIPATIITGFLGSGKTTL 32
+++SS K RRF T SE SDVSTKIPPD+RIPATIITGFLGSGKTTL
Sbjct: 61 RTIITSSNCCKAHRRRFSVSATATTTPQSEDSDVSTKIPPDNRIPATIITGFLGSGKTTL 120
Query: 31 LNHILTAEHG 2
LNHILTA+HG
Sbjct: 121 LNHILTADHG 130
>ref|XP_007215384.1| hypothetical protein PRUPE_ppa005748mg [Prunus persica]
gi|462411534|gb|EMJ16583.1| hypothetical protein
PRUPE_ppa005748mg [Prunus persica]
Length = 445
Score = 97.4 bits (241), Expect = 2e-18
Identities = 68/119 (57%), Positives = 79/119 (66%), Gaps = 6/119 (5%)
Frame = -2
Query: 340 DLATTFVGLLKRQAS-MPRLQVQAAAFPLLWRNRARSYS-NLR--TSSIDVRLVSSSLAS 173
DLATT +GL R ++ +PR+ AA FPL WR R +S +LR TSS LV+
Sbjct: 7 DLATTLLGLTSRHSTRLPRVGA-AALFPLTWRPRTPPHSQSLRYSTSSFCRTLVAKP--- 62
Query: 172 KGRVRRFXXXXXXT--DSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAEHG 2
K RRF T SE+SDV T+I PD+RIPATIITGFLGSGKTTLLNHILTAEHG
Sbjct: 63 KLGCRRFTVAATATTSQSESSDVLTQIVPDNRIPATIITGFLGSGKTTLLNHILTAEHG 121
>ref|XP_007023312.1| Plastid transcriptionally active 17 isoform 2, partial [Theobroma
cacao] gi|508778678|gb|EOY25934.1| Plastid
transcriptionally active 17 isoform 2, partial
[Theobroma cacao]
Length = 348
Score = 95.1 bits (235), Expect = 9e-18
Identities = 62/129 (48%), Positives = 78/129 (60%), Gaps = 13/129 (10%)
Frame = -2
Query: 352 MATL--DLATTFVGLLKR-----QASMPRLQVQAAAFPLLWRN---RARSYSNLRTSSID 203
MATL D+ATTF + R + P ++ PL ++ + + S+ TSS+
Sbjct: 1 MATLSMDIATTFFNITTRCCGHHHRTPPLSGIRTTLLPLFFKPTTIKTQPLSSKTTSSLP 60
Query: 202 VRLVSSSLASKGRVRRFXXXXXXT---DSEASDVSTKIPPDDRIPATIITGFLGSGKTTL 32
+++SS K RRF T SE SDVSTKIPPD+RIPATIITGFLGSGKTTL
Sbjct: 61 RTIITSSNCCKAHRRRFSVSATATTTPQSEDSDVSTKIPPDNRIPATIITGFLGSGKTTL 120
Query: 31 LNHILTAEH 5
LNHILTA+H
Sbjct: 121 LNHILTADH 129
>ref|XP_006341395.1| PREDICTED: COBW domain-containing protein 1-like [Solanum
tuberosum]
Length = 454
Score = 92.8 bits (229), Expect = 4e-17
Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 7/122 (5%)
Frame = -2
Query: 346 TLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYSNLRTSSIDVRLVSSSLASKG 167
++D+ATTF+GL KRQ R P LW+ +L TSS +S ++ +
Sbjct: 5 SIDIATTFMGLAKRQTPHFR------GLPTLWKTSKCQRFSLSTSSSS--RISFAINNSS 56
Query: 166 RVRRFXXXXXXT-------DSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAE 8
+ RF + SE SD+ TKIP D+RIPATIITGFLGSGKTTLLNHILTA+
Sbjct: 57 KPNRFSRRFTVSATSTSAPQSEDSDILTKIPQDNRIPATIITGFLGSGKTTLLNHILTAD 116
Query: 7 HG 2
HG
Sbjct: 117 HG 118
>ref|XP_006389800.1| hypothetical protein EUTSA_v10018560mg [Eutrema salsugineum]
gi|557086234|gb|ESQ27086.1| hypothetical protein
EUTSA_v10018560mg [Eutrema salsugineum]
Length = 443
Score = 91.3 bits (225), Expect = 1e-16
Identities = 60/123 (48%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Frame = -2
Query: 352 MATL----DLATTFVGLLK-RQASMPRLQVQAAAFPLLWRNRARSYSNLRTSSIDVRLVS 188
MATL ++ATTF+ R A+ + ++A PL R RA + S T S L
Sbjct: 1 MATLSKLEEMATTFLAFTAPRSATALNYRFSSSAVPLFSRRRATTVSVRTTPS----LFY 56
Query: 187 SSLASKGRVRRFXXXXXXTDS-EASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTA 11
S + + R+RRF + E SDV+TKIP D+RIPATIITGFLGSGKTTLLNHILT
Sbjct: 57 SPVLNSNRLRRFSSVSASASAPEDSDVATKIPQDNRIPATIITGFLGSGKTTLLNHILTR 116
Query: 10 EHG 2
+HG
Sbjct: 117 DHG 119
>gb|EXB67238.1| hypothetical protein L484_025717 [Morus notabilis]
Length = 460
Score = 90.5 bits (223), Expect = 2e-16
Identities = 62/122 (50%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Frame = -2
Query: 340 DLATTFVGLLKRQASMPRLQVQAAA-FPLLWRNRARSYSNLR---TSSIDVR-LVSSSLA 176
DLAT L R + P +V+ A FPLLWR R S TSS R +++ A
Sbjct: 7 DLATAIFRLTARSPT-PLSRVRTAVHFPLLWRPRVPHSSQTARYSTSSFRSRTIIAVDFA 65
Query: 175 SKGRVRRFXXXXXXT----DSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAE 8
R R E SDVSTKIPPD+RIPATIITGFLGSGKTTLLNHILTA+
Sbjct: 66 KPKRSSRSLTVASTAAPTSQGETSDVSTKIPPDNRIPATIITGFLGSGKTTLLNHILTAD 125
Query: 7 HG 2
HG
Sbjct: 126 HG 127
>ref|XP_006427459.1| hypothetical protein CICLE_v10025584mg [Citrus clementina]
gi|557529449|gb|ESR40699.1| hypothetical protein
CICLE_v10025584mg [Citrus clementina]
Length = 452
Score = 90.5 bits (223), Expect = 2e-16
Identities = 56/117 (47%), Positives = 73/117 (62%), Gaps = 4/117 (3%)
Frame = -2
Query: 340 DLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYS-NLRTSSIDVRLVSSSLASKGR 164
++ATTF+ R + P +++ P+L++ RAR+ S SS + ++ +A
Sbjct: 8 EMATTFLSFAARPQN-PFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSKFIAVKVARP-- 64
Query: 163 VRRFXXXXXXTD---SEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAEHG 2
RRF SE SD+ TKIPPD+RIPATIITGFLGSGKTTLLNHILTAEHG
Sbjct: 65 YRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKTTLLNHILTAEHG 121
>ref|XP_006492106.1| PREDICTED: COBW domain-containing protein 1-like [Citrus sinensis]
Length = 450
Score = 89.4 bits (220), Expect = 5e-16
Identities = 54/115 (46%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Frame = -2
Query: 340 DLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRAR--SYSNLRTSSIDVRLVSSSLASKG 167
++ATTF+ R + P +++ P+L++ RAR SY + +S+ +
Sbjct: 8 EMATTFLSFTARPQN-PFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVPRPYR 66
Query: 166 RVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAEHG 2
R T SE SD+ TKIPPD+RIPATIITGFLGSGKTTLLNHILTAEHG
Sbjct: 67 RFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKTTLLNHILTAEHG 121
>ref|XP_006492104.1| PREDICTED: COBW domain-containing protein 1-like [Citrus sinensis]
Length = 452
Score = 89.4 bits (220), Expect = 5e-16
Identities = 54/115 (46%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Frame = -2
Query: 340 DLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRAR--SYSNLRTSSIDVRLVSSSLASKG 167
++ATTF+ R + P +++ P+L++ RAR SY + +S+ +
Sbjct: 8 EMATTFLSFTARPQN-PFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVPRPYR 66
Query: 166 RVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAEHG 2
R T SE SD+ TKIPPD+RIPATIITGFLGSGKTTLLNHILTAEHG
Sbjct: 67 RFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKTTLLNHILTAEHG 121
>gb|EYU26999.1| hypothetical protein MIMGU_mgv1a022575mg [Mimulus guttatus]
Length = 190
Score = 88.6 bits (218), Expect = 8e-16
Identities = 58/123 (47%), Positives = 76/123 (61%), Gaps = 8/123 (6%)
Frame = -2
Query: 346 TLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYSNLR-----TSSIDVRLVSSS 182
++++A +F+G K Q+S P + ++ F L+RNR ++ R T+ R V S
Sbjct: 8 SVEMAASFLGFAKTQSS-PISSIHSSLF--LYRNRPNFFAQSRKFFTSTTYGGSRFVYSE 64
Query: 181 LASKGRVRRFXXXXXXT---DSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTA 11
SK RF T ++E SD TKIPPD+RIPATIITGFLGSGKTTLLNHILTA
Sbjct: 65 RPSKRFPLRFAVSAAATSAPETEGSDSVTKIPPDNRIPATIITGFLGSGKTTLLNHILTA 124
Query: 10 EHG 2
+HG
Sbjct: 125 DHG 127
>gb|EYU21681.1| hypothetical protein MIMGU_mgv1a0059061mg, partial [Mimulus
guttatus]
Length = 309
Score = 88.6 bits (218), Expect = 8e-16
Identities = 58/123 (47%), Positives = 78/123 (63%), Gaps = 8/123 (6%)
Frame = -2
Query: 346 TLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYSNLR-----TSSIDVRLVSSS 182
++++A +F+G K Q+S P + ++ F L+R+R ++ R TS R+ S
Sbjct: 8 SVEMAASFLGFAKIQSS-PISSIHSSLF--LYRSRPNFFAQRRKFFTSTSYGGSRIEYSE 64
Query: 181 LASKGRVRRFXXXXXXT---DSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTA 11
SK RRF T ++E+SD TKIPPD+RIPATIITGFLGSGKTTLLNHILTA
Sbjct: 65 RPSKRFSRRFAVSAAATSAPEAESSDSVTKIPPDNRIPATIITGFLGSGKTTLLNHILTA 124
Query: 10 EHG 2
+HG
Sbjct: 125 DHG 127
>ref|XP_003556540.1| PREDICTED: COBW domain-containing protein 1-like [Glycine max]
Length = 445
Score = 88.6 bits (218), Expect = 8e-16
Identities = 56/115 (48%), Positives = 64/115 (55%)
Frame = -2
Query: 346 TLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYSNLRTSSIDVRLVSSSLASKG 167
T ++A +F GL R L +Q PLL R S+S T + S A+
Sbjct: 4 TAEVACSFFGLAYRNRKPFTLSLQTTLLPLLRRTTTHSHSQSLTFPLRPSRRFSVPATT- 62
Query: 166 RVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAEHG 2
SE SDVST IPPD+RIPATIITGFLGSGKTTLLNHILTAEHG
Sbjct: 63 --------TAPPQSEDSDVSTLIPPDNRIPATIITGFLGSGKTTLLNHILTAEHG 109
>ref|XP_004303270.1| PREDICTED: COBW domain-containing protein 1-like [Fragaria vesca
subsp. vesca]
Length = 448
Score = 88.2 bits (217), Expect = 1e-15
Identities = 60/115 (52%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = -2
Query: 340 DLATTFVGLLKRQASMPRLQVQAAAFPLLWRNR--ARSYSNLRTSSIDVRLVSSSLASKG 167
DLA T +GL R ++ V A A WR R A YS TSS RLVS
Sbjct: 7 DLAATLLGLTSRHSAW----VGAPAL-FSWRPRTSALRYST-STSSFRHRLVSKPKRVSR 60
Query: 166 RVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAEHG 2
R S+ SDV T+IPPD+RIPATIITGFLGSGKTTLLNHILTA+HG
Sbjct: 61 RFSVAATTASPPQSDGSDVLTQIPPDNRIPATIITGFLGSGKTTLLNHILTADHG 115
>ref|XP_003536775.1| PREDICTED: COBW domain-containing protein 1 isoform 1 [Glycine max]
Length = 446
Score = 87.0 bits (214), Expect = 2e-15
Identities = 55/118 (46%), Positives = 64/118 (54%)
Frame = -2
Query: 355 LMATLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSYSNLRTSSIDVRLVSSSLA 176
L T ++A++F+GL L +Q PLL R S R ++ L
Sbjct: 4 LTFTTEVASSFLGLAYHNPKPFTLSLQTTLLPLLRRTTTHS-----------RSLTFPLR 52
Query: 175 SKGRVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAEHG 2
R SE SDVST IPPD+RIPATIITGFLGSGKTTLLNHILTAEHG
Sbjct: 53 PSRRFFVTSATTAPPQSEDSDVSTVIPPDNRIPATIITGFLGSGKTTLLNHILTAEHG 110
>ref|XP_006302247.1| hypothetical protein CARUB_v10020280mg [Capsella rubella]
gi|482570957|gb|EOA35145.1| hypothetical protein
CARUB_v10020280mg [Capsella rubella]
Length = 454
Score = 86.3 bits (212), Expect = 4e-15
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Frame = -2
Query: 352 MATLDLATTFVGLLKRQASMP-RLQVQAAAFPLLWRNRARSYSNLRTSSIDVRLVSSSLA 176
++ L++ATTF+ + S +AA + R RA + S T S L S +
Sbjct: 4 LSKLEIATTFLAYTAPRCSTTLNPHFSSAAISVFSRRRATTASVTATQS----LFFSPVV 59
Query: 175 SKGRVRRFXXXXXXTDS----EASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAE 8
+ R R+F + E SDV+TKIPPD+RIPATIITGFLGSGKTTLLNHILT +
Sbjct: 60 NSNRRRKFSSVSASASAPPQTEDSDVTTKIPPDNRIPATIITGFLGSGKTTLLNHILTRD 119
Query: 7 HG 2
HG
Sbjct: 120 HG 121
>ref|NP_178163.1| protein plastid transcriptionally active 17 [Arabidopsis thaliana]
gi|6730739|gb|AAF27129.1|AC018849_17 hypothetical
protein; 58060-60358 [Arabidopsis thaliana]
gi|48958493|gb|AAT47799.1| At1g80480 [Arabidopsis
thaliana] gi|51536562|gb|AAU05519.1| At1g80480
[Arabidopsis thaliana] gi|332198289|gb|AEE36410.1|
plastid transcriptionally active 17 protein [Arabidopsis
thaliana]
Length = 444
Score = 86.3 bits (212), Expect = 4e-15
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Frame = -2
Query: 352 MATLDLATTFVGLLKRQASMPRLQVQAAAFPLLWRNRARSY-SNLRTSSIDVRLVSSSLA 176
++TL++ATTF+ ++S AAF + + A S S R +++ VR S
Sbjct: 4 LSTLEIATTFLSFTAPRSS--------AAFNYRFSSAAVSVLSRPRATTVSVRTTPSFFY 55
Query: 175 SK--GRVRRFXXXXXXTDSEASDVSTKIPPDDRIPATIITGFLGSGKTTLLNHILTAEHG 2
S R R T +E SDV+TKIPPD+RIPATIITGFLGSGKTTLLNHILT +HG
Sbjct: 56 SPVVRRQRFSSVSASATQTEDSDVTTKIPPDNRIPATIITGFLGSGKTTLLNHILTRDHG 115