BLASTX nr result
ID: Sinomenium21_contig00003962
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00003962 (615 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab... 106 6e-21 ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Caps... 104 2e-20 ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi... 104 2e-20 ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutr... 102 1e-19 ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloropl... 97 3e-18 ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citr... 97 4e-18 ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloropl... 96 6e-18 ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec... 91 3e-16 ref|XP_002302374.1| plastid-specific ribosomal family protein [P... 90 6e-16 ref|XP_007137271.1| hypothetical protein PHAVU_009G113500g [Phas... 87 5e-15 sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c... 86 7e-15 ref|XP_007226349.1| hypothetical protein PRUPE_ppa022547mg [Prun... 85 2e-14 ref|XP_003526512.1| PREDICTED: 50S ribosomal protein 6, chloropl... 85 2e-14 gb|EXC01136.1| 50S ribosomal protein 6 [Morus notabilis] 84 3e-14 ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloropl... 83 7e-14 ref|XP_007215115.1| hypothetical protein PRUPE_ppa012953mg [Prun... 82 1e-13 ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea ma... 82 2e-13 ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea ma... 82 2e-13 ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloropl... 81 2e-13 gb|ACU23144.1| unknown [Glycine max] 81 2e-13 >ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata] Length = 108 Score = 106 bits (264), Expect = 6e-21 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 6/98 (6%) Frame = +3 Query: 54 MSVSAIFGTSVV------VAKHNTSPSLGVGRRVVGVIECSSRPQKKATAHHMKTRPKKT 215 MSVSAIFGT +V V + P+LG G + VIECSSRPQKK+TAHH K+RPKKT Sbjct: 1 MSVSAIFGTGIVTVAASPVLRQFQVPTLGNGGGLGMVIECSSRPQKKSTAHHRKSRPKKT 60 Query: 216 APWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGGSALA 329 PWD+KR+PTVYA EWT FT ++ GG +A A Sbjct: 61 QPWDIKRKPTVYAPLPPLPAEWTPFTLASDDGGATAAA 98 >ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Capsella rubella] gi|482557644|gb|EOA21836.1| hypothetical protein CARUB_v10002303mg [Capsella rubella] Length = 109 Score = 104 bits (259), Expect = 2e-20 Identities = 56/104 (53%), Positives = 67/104 (64%), Gaps = 7/104 (6%) Frame = +3 Query: 54 MSVSAIFGTSVV-------VAKHNTSPSLGVGRRVVGVIECSSRPQKKATAHHMKTRPKK 212 MSVSAIFGT +V V + P LG G + VIECSSRPQKK+TAHH K+RPKK Sbjct: 1 MSVSAIFGTGIVTVAASSPVLRQFQVPKLGNGGGLGMVIECSSRPQKKSTAHHRKSRPKK 60 Query: 213 TAPWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGGSALAQPPSD 344 + PWD+KR+PTVYA EWT FT ++ GG +A A P D Sbjct: 61 SQPWDIKRKPTVYAPLPPLPAEWTPFTLASDDGGATA-ASPAGD 103 >ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana] gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S ribosomal protein 6, chloroplastic; AltName: Full=CL25; AltName: Full=Plastid-specific 50S ribosomal protein 6; Short=PSRP-6; Flags: Precursor gi|10177888|dbj|BAB11220.1| unnamed protein product [Arabidopsis thaliana] gi|14517428|gb|AAK62604.1| AT5g17870/MPI7_10 [Arabidopsis thaliana] gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10 [Arabidopsis thaliana] gi|21554906|gb|AAM63726.1| plastid-specific ribosomal protein 6 precursor (Psrp-6)-like [Arabidopsis thaliana] gi|332005097|gb|AED92480.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana] Length = 106 Score = 104 bits (259), Expect = 2e-20 Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 6/98 (6%) Frame = +3 Query: 54 MSVSAIFGTSVV------VAKHNTSPSLGVGRRVVGVIECSSRPQKKATAHHMKTRPKKT 215 MSVSAIFGT +V V + P LG G + VIECSSRPQKK+TAHH KTRPKKT Sbjct: 1 MSVSAIFGTGIVTVAASPVLRQFQVPKLGNGGGLGMVIECSSRPQKKSTAHHRKTRPKKT 60 Query: 216 APWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGGSALA 329 PWD+KR+PTVYA EW+ FT ++ GG + A Sbjct: 61 QPWDIKRKPTVYAPLPPLPAEWSPFTLASDDGGAATAA 98 >ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutrema salsugineum] gi|557101420|gb|ESQ41783.1| hypothetical protein EUTSA_v10015071mg [Eutrema salsugineum] Length = 109 Score = 102 bits (253), Expect = 1e-19 Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 6/103 (5%) Frame = +3 Query: 54 MSVSAIFGTSVVVAKHNTS------PSLGVGRRVVGVIECSSRPQKKATAHHMKTRPKKT 215 MSVSAIFGT +V + S P G G + VIECSSRPQKK+TAHH KTRPKKT Sbjct: 1 MSVSAIFGTGIVTVAASPSLRQFQVPKSGNGGGLGMVIECSSRPQKKSTAHHRKTRPKKT 60 Query: 216 APWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGGSALAQPPSD 344 PWD+KR+PTVYA +W ++ GG + A P D Sbjct: 61 QPWDIKRKPTVYAPLPPLPPDWAPLALSSDDGGAATAASPAGD 103 >ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Vitis vinifera] Length = 108 Score = 97.4 bits (241), Expect = 3e-18 Identities = 51/108 (47%), Positives = 61/108 (56%), Gaps = 8/108 (7%) Frame = +3 Query: 54 MSVSAIFG--------TSVVVAKHNTSPSLGVGRRVVGVIECSSRPQKKATAHHMKTRPK 209 MS+SAIFG T+ +P LG G VIECSSRPQKK T+HHMKTRP+ Sbjct: 1 MSISAIFGAAVPNRCSTAASFGARKAAPRLGGG---AAVIECSSRPQKKGTSHHMKTRPR 57 Query: 210 KTAPWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGGSALAQPPSDDNL 353 KT PWD+KRRPTVYA EWT+ +S + + PP L Sbjct: 58 KTQPWDIKRRPTVYAPLPPLPPEWTVVSSDADASDAAVPPGPPPTPQL 105 >ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citrus clementina] gi|557535820|gb|ESR46938.1| hypothetical protein CICLE_v10002778mg [Citrus clementina] Length = 149 Score = 97.1 bits (240), Expect = 4e-18 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 2/92 (2%) Frame = +3 Query: 54 MSVSAIFGTSVVVAKHNTSPSLGV-GRRVVG-VIECSSRPQKKATAHHMKTRPKKTAPWD 227 MS+S+ FG+ +VV + +S LGV G+ VG VIE SSRPQKKATAHHMKTRP+KT PWD Sbjct: 39 MSISSFFGSQIVVVPNLSSKKLGVEGKCNVGLVIENSSRPQKKATAHHMKTRPRKTQPWD 98 Query: 228 VKRRPTVYAXXXXXXXEWTLFTSQTETGGGSA 323 V R+PTVY +W+L + T+T +A Sbjct: 99 VNRKPTVYPPLPPLPPDWSLVSDDTDTDASAA 130 >ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Citrus sinensis] Length = 111 Score = 96.3 bits (238), Expect = 6e-18 Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%) Frame = +3 Query: 54 MSVSAIFGTSVVVAKHNTSPSLGVGRRV-VG-VIECSSRPQKKATAHHMKTRPKKTAPWD 227 MS+S+ FG+ +VV + +S LG+ + VG VIE SSRPQKKATAHHMKTRP+KT PWD Sbjct: 1 MSISSFFGSQIVVVPNLSSKKLGMEEKCNVGLVIENSSRPQKKATAHHMKTRPRKTQPWD 60 Query: 228 VKRRPTVYAXXXXXXXEWTLFTSQTETGGGSA 323 V R+PTVY +WTL + T+T +A Sbjct: 61 VNRKPTVYPPLPPLPPDWTLVSDDTDTDASAA 92 >ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative [Ricinus communis] gi|223550719|gb|EEF52205.1| 50S ribosomal protein CL25, chloroplast precursor, putative [Ricinus communis] Length = 126 Score = 90.5 bits (223), Expect = 3e-16 Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 13/101 (12%) Frame = +3 Query: 54 MSVSAIFGTSVVVAKHNTSPSLGVG-----RRVVG--------VIECSSRPQKKATAHHM 194 MS+S+IFG+ VV+ + L V + G VIECSSRP+KKATAHHM Sbjct: 1 MSISSIFGSPVVLLSKASLKQLNVEVKSAPKTATGNGWYSGGLVIECSSRPKKKATAHHM 60 Query: 195 KTRPKKTAPWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGG 317 KTRPKK+ PWD++R+PTVY +WTL +S ++ G G Sbjct: 61 KTRPKKSQPWDIRRKPTVYPPLPPLPPDWTLVSSASDNGDG 101 >ref|XP_002302374.1| plastid-specific ribosomal family protein [Populus trichocarpa] gi|118486925|gb|ABK95296.1| unknown [Populus trichocarpa] gi|222844100|gb|EEE81647.1| plastid-specific ribosomal family protein [Populus trichocarpa] Length = 123 Score = 89.7 bits (221), Expect = 6e-16 Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 14/101 (13%) Frame = +3 Query: 54 MSVSAIFGTSVVVA-KHNTSPS------------LGVGRRVVGV-IECSSRPQKKATAHH 191 MSVS+IFG+ ++A K +T+PS +G G G+ IECSSRPQKKATAHH Sbjct: 1 MSVSSIFGSPFLLAPKPSTTPSFKPVNGEFKTVPIGTGFGHGGMSIECSSRPQKKATAHH 60 Query: 192 MKTRPKKTAPWDVKRRPTVYAXXXXXXXEWTLFTSQTETGG 314 KTRP+K+ PWD+KR+PTVYA +WTL +S + G Sbjct: 61 RKTRPRKSQPWDIKRKPTVYAPLPPLPPDWTLVSSSGDGDG 101 >ref|XP_007137271.1| hypothetical protein PHAVU_009G113500g [Phaseolus vulgaris] gi|561010358|gb|ESW09265.1| hypothetical protein PHAVU_009G113500g [Phaseolus vulgaris] Length = 96 Score = 86.7 bits (213), Expect = 5e-15 Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 2/96 (2%) Frame = +3 Query: 57 SVSAIFGTSVVVAKHNTSPSLGVGRRVVG--VIECSSRPQKKATAHHMKTRPKKTAPWDV 230 S+S++FG V+A SLG+G+R G I CSSRP+KKATAHHMKTRP+K+ PWD+ Sbjct: 3 SLSSMFGCGAVMAPPQ---SLGIGKRSDGGLTIVCSSRPKKKATAHHMKTRPRKSQPWDI 59 Query: 231 KRRPTVYAXXXXXXXEWTLFTSQTETGGGSALAQPP 338 R+PTVY +WTL +A+A PP Sbjct: 60 NRKPTVYDPMPPLPPDWTLII--PADASSAAVAPPP 93 >sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName: Full=CL25; AltName: Full=Plastid-specific 50S ribosomal protein 6; Short=PSRP-6; Flags: Precursor gi|7578927|gb|AAF64189.1|AF245292_1 plastid-specific ribosomal protein 6 precursor [Spinacia oleracea] Length = 116 Score = 86.3 bits (212), Expect = 7e-15 Identities = 50/103 (48%), Positives = 55/103 (53%), Gaps = 13/103 (12%) Frame = +3 Query: 54 MSVSAIFGTSVVVAKHNTSPSLGVGRRV-------------VGVIECSSRPQKKATAHHM 194 MSVSAIFG VV S GR V V IECSSRPQKK TAHHM Sbjct: 1 MSVSAIFGARVVTIPSVLRTSSVDGRTVKLQPSTGGSCGGGVITIECSSRPQKKGTAHHM 60 Query: 195 KTRPKKTAPWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGGSA 323 KTRPKKTA WD+KR P VY EWT+ +S + S+ Sbjct: 61 KTRPKKTARWDIKRGPAVYPPLPPLPAEWTIVSSAVDEADSSS 103 >ref|XP_007226349.1| hypothetical protein PRUPE_ppa022547mg [Prunus persica] gi|462423285|gb|EMJ27548.1| hypothetical protein PRUPE_ppa022547mg [Prunus persica] Length = 67 Score = 84.7 bits (208), Expect = 2e-14 Identities = 38/67 (56%), Positives = 45/67 (67%) Frame = +3 Query: 144 VIECSSRPQKKATAHHMKTRPKKTAPWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGGSA 323 +IECSSRPQKKATAHH KTRP+KT PWDVKR+PTVY +WTL +S E S Sbjct: 1 MIECSSRPQKKATAHHRKTRPRKTQPWDVKRKPTVYTPLPPLPADWTLVSSADEASSSSP 60 Query: 324 LAQPPSD 344 P ++ Sbjct: 61 QEPPTTE 67 >ref|XP_003526512.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Glycine max] Length = 98 Score = 84.7 bits (208), Expect = 2e-14 Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 2/78 (2%) Frame = +3 Query: 60 VSAIFGTSVVVAKHNTSPSLGVGRRVVG--VIECSSRPQKKATAHHMKTRPKKTAPWDVK 233 VS++FG VV+A S ++G+GRR G I CSSRPQKKATAHHMKTRP+KT WD Sbjct: 4 VSSMFGCGVVMA---ASQAMGIGRRSDGGLTIVCSSRPQKKATAHHMKTRPRKTQAWDRN 60 Query: 234 RRPTVYAXXXXXXXEWTL 287 R+PTVY +WTL Sbjct: 61 RKPTVYDPLPPLPPDWTL 78 >gb|EXC01136.1| 50S ribosomal protein 6 [Morus notabilis] Length = 115 Score = 84.0 bits (206), Expect = 3e-14 Identities = 46/113 (40%), Positives = 59/113 (52%), Gaps = 17/113 (15%) Frame = +3 Query: 54 MSVSAIFGTSVVVAKHNTSPSLGVGRRVVG-----------VIECSSRPQKKATAHHMKT 200 MS +A FG +V + ++P+ G R VIECSSRP KKATAHHMKT Sbjct: 1 MSTAAFFGAQIVAVRIPSAPASFAGARKSAPWNGGGGGGPAVIECSSRPTKKATAHHMKT 60 Query: 201 RPKKTAPWDVKRRPTVYAXXXXXXXEWTLFTSQTE------TGGGSALAQPPS 341 RPKKT WD++R+PTVYA +W L S + S + PP+ Sbjct: 61 RPKKTQAWDIRRKPTVYAPLPPLPPDWVLAGSDDSSSDSIPSSSSSPVESPPA 113 >ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Setaria italica] Length = 117 Score = 82.8 bits (203), Expect = 7e-14 Identities = 40/73 (54%), Positives = 43/73 (58%) Frame = +3 Query: 111 PSLGVGRRVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRRPTVYAXXXXXXXEWTLF 290 PSL G R +ECSSRPQKK T HHMKTRPKKT PWD+KRRPT Y +WTL Sbjct: 30 PSLLGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRRPTQYPPLPQLPPDWTLV 89 Query: 291 TSQTETGGGSALA 329 S A A Sbjct: 90 ASSATVDAEQAPA 102 >ref|XP_007215115.1| hypothetical protein PRUPE_ppa012953mg [Prunus persica] gi|462411265|gb|EMJ16314.1| hypothetical protein PRUPE_ppa012953mg [Prunus persica] Length = 148 Score = 82.0 bits (201), Expect = 1e-13 Identities = 43/81 (53%), Positives = 50/81 (61%), Gaps = 1/81 (1%) Frame = +3 Query: 105 TSPSLG-VGRRVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRRPTVYAXXXXXXXEW 281 TSP G VG +IE SSRPQKKATAHH KTRP+KT PWDVKR+PTVY +W Sbjct: 19 TSPWRGSVGGGTGLMIEYSSRPQKKATAHHRKTRPRKTQPWDVKRKPTVYTLLPPLPADW 78 Query: 282 TLFTSQTETGGGSALAQPPSD 344 TL +S E S P ++ Sbjct: 79 TLVSSADEASSSSPKEPPTTE 99 >ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea mays] gi|195642604|gb|ACG40770.1| plastid-specific ribosomal protein 6 precursor [Zea mays] Length = 123 Score = 81.6 bits (200), Expect = 2e-13 Identities = 42/78 (53%), Positives = 46/78 (58%) Frame = +3 Query: 108 SPSLGVGRRVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRRPTVYAXXXXXXXEWTL 287 SP G GR + V ECSSRPQKK T HHMKTRPKKT PWD+KRRPT Y +WTL Sbjct: 35 SPLHGGGRAALAV-ECSSRPQKKGTKHHMKTRPKKTQPWDIKRRPTQYPPLPPLPPDWTL 93 Query: 288 FTSQTETGGGSALAQPPS 341 S A A P+ Sbjct: 94 VASGATVDVEEAEAPAPA 111 >ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea mays] gi|195615274|gb|ACG29467.1| plastid-specific ribosomal protein 6 precursor [Zea mays] gi|413925596|gb|AFW65528.1| plastid-specific ribosomal protein 6 [Zea mays] Length = 121 Score = 81.6 bits (200), Expect = 2e-13 Identities = 42/78 (53%), Positives = 46/78 (58%) Frame = +3 Query: 108 SPSLGVGRRVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRRPTVYAXXXXXXXEWTL 287 SP G GR + V ECSSRPQKK T HHMKTRPKKT PWD+KRRPT Y +WTL Sbjct: 33 SPLHGGGRAALAV-ECSSRPQKKGTKHHMKTRPKKTQPWDIKRRPTQYPPLPPLPPDWTL 91 Query: 288 FTSQTETGGGSALAQPPS 341 S A A P+ Sbjct: 92 VASGATVDVEEAEAPAPA 109 >ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum tuberosum] Length = 111 Score = 81.3 bits (199), Expect = 2e-13 Identities = 49/109 (44%), Positives = 60/109 (55%), Gaps = 12/109 (11%) Frame = +3 Query: 54 MSVSAIFGTSVVVAKHNTSPS----------LGVGRRVVG--VIECSSRPQKKATAHHMK 197 MS SAIFG +VV +++ S L VG VIECSSRPQKKATAHH K Sbjct: 1 MSASAIFGLQMVVLPRSSTVSTTGFTGGATRLAAAPTSVGGLVIECSSRPQKKATAHHKK 60 Query: 198 TRPKKTAPWDVKRRPTVYAXXXXXXXEWTLFTSQTETGGGSALAQPPSD 344 TRP+KT WD++R P VYA EW+ + E+G +A SD Sbjct: 61 TRPRKTQAWDIRRGPAVYAPLPPLPSEWSF--ASDESGQPAAAGASESD 107 >gb|ACU23144.1| unknown [Glycine max] Length = 92 Score = 81.3 bits (199), Expect = 2e-13 Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Frame = +3 Query: 69 IFGTSVVVAKHNTSPSLGVGRRVVG--VIECSSRPQKKATAHHMKTRPKKTAPWDVKRRP 242 +FG VV+A S ++G+GRR G I CSSRPQKKATAHHMKTRP+KT WD R+P Sbjct: 1 MFGCGVVMA---ASQAMGIGRRSDGGLTIVCSSRPQKKATAHHMKTRPRKTQAWDRNRKP 57 Query: 243 TVYAXXXXXXXEWTL 287 TVY +WTL Sbjct: 58 TVYDPLPPLPPDWTL 72