BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00003706
         (5333 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1946   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1932   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1779   0.0  
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...  1768   0.0  
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...  1744   0.0  
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...  1724   0.0  
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...  1722   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1687   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...  1684   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1679   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  1667   0.0  
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...  1654   0.0  
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...  1649   0.0  
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...  1639   0.0  
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...  1632   0.0  
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...  1603   0.0  
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...  1598   0.0  
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...  1592   0.0  
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...  1582   0.0  
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...  1580   0.0  

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1946 bits (5041), Expect = 0.0
 Identities = 1027/1717 (59%), Positives = 1241/1717 (72%), Gaps = 67/1717 (3%)
 Frame = +3

Query: 39   TEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDEATPC 218
            T G+TE VEAVKF   TDEEVRK+SF KIT+P + D +  P PGGLYDPALG +DE TPC
Sbjct: 54   TSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPC 113

Query: 219  RSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQCTSQL 398
            +SCGQRSF CPGHCGHIDLV  +Y            QK+CFFCH+FK    LV++  SQL
Sbjct: 114  QSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQL 173

Query: 399  ELIIKGDVVGAKNIAAQLSESLPCGEN---ETINMKDVTCHSETK---------HLERSS 542
            ELI KGDVVGAKN+     +S+   E+   E  +   V+C S            HL++  
Sbjct: 174  ELISKGDVVGAKNL-----DSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQE 228

Query: 543  WTSIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYM-NMSNKNTRANVLHGS 719
            WTS+Q  EAMS++D FL           AKSP  T PTFGW +M  +S+  TRANV+ GS
Sbjct: 229  WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGS 288

Query: 720  KLKQSFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGH 899
            KL++      E+K S+  VE  +D+F  G+ VD+D+  SS A  D + D+ TK  ++KG 
Sbjct: 289  KLERPLSRVAEEK-SSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGA 347

Query: 900  SLPTEFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMF 1079
              P EF+KQ  FFSGPLLP+E    ++ LWENE  LCS ISDI Q+ L  S  +  +SMF
Sbjct: 348  QAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMF 407

Query: 1080 FIEALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWME 1259
            F+E +LVPPIKFRPPSKG  SVMEHPQT LL +VLQ N++LGNAH NNS+RS+++ RWM+
Sbjct: 408  FLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMD 467

Query: 1260 LQQSVNVLFGNKKNIGQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYL 1436
            LQQS+NVLF  K   GQ + + G+GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPYL
Sbjct: 468  LQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYL 527

Query: 1437 AVNEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRK 1616
            AVNEIGIPPYFALRLTYPE+VTPWN  KLR+AIINGPE+HPGATHY+DK + +KLA ++K
Sbjct: 528  AVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKK 587

Query: 1617 SRNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVV 1796
             R SISRKLPSSRGVV QPG+S ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVV
Sbjct: 588  MRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVV 647

Query: 1797 RVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDT 1976
            RVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNANNQYI+P+ GD 
Sbjct: 648  RVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDP 707

Query: 1977 KRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDE 2156
             RGLIQDHIVSAVLLTK+DTFLT ++YN LLYS+G+S    G+ IGK G+KV  ++SEDE
Sbjct: 708  IRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLS-SGSGSFIGKPGKKVSVLDSEDE 766

Query: 2157 MQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQ------- 2315
            MQ +LPAIWKP PLW+GKQVIT++LNH+TR  G +PFT +K   I +EYFGS+       
Sbjct: 767  MQPLLPAIWKPEPLWSGKQVITAVLNHITR--GRKPFTTEKDGKIPREYFGSEIDEKKSG 824

Query: 2316 ------------------SGEGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAG 2441
                               GE KL IHKN  V GVIDK+QF KYGLVH VQELYGS+TAG
Sbjct: 825  KGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAG 884

Query: 2442 VLLSALSRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFDR--RVGEQVHAEFLGYKDG 2615
            +LLS LSRLFTVFLQMHGFTCGVDDLLI  + D+ RK   D+   +GE VH +F+G   G
Sbjct: 885  ILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHG 944

Query: 2616 DIDEMTLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFP 2795
             ID + LQVE+EK++  NGE+A  RLD+MM +   +LT++VN  L        GL+KPFP
Sbjct: 945  KIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLK-----GLVKPFP 999

Query: 2796 RNCFFLMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGF 2975
            +NC  LMT +GAKGS VNF QISS LGQQ+LEGKRVPRM+SGKTLPCFPPWD ++RAGGF
Sbjct: 1000 KNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGF 1059

Query: 2976 ISDRYLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDA 3155
            ISDR+LTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+
Sbjct: 1060 ISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDS 1119

Query: 3156 DGSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPE 3335
            DGS+VQF YG+DGVDVH+TSF+++F+ LAVN++VV E+     + GKF   N YI++LP+
Sbjct: 1120 DGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFG---QDGKF---NGYIQKLPK 1173

Query: 3336 ALEKSTKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPS 3515
             L K TK FI     +       +K K              A+PGEPVGV+AAQS+GEPS
Sbjct: 1174 ELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPS 1233

Query: 3516 TQMTLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAA 3695
            TQMTLNTFH AG+ GEVNVTLGIPRLQEILM A+ +I+TP+MTCPL  G+++DDA+RLAA
Sbjct: 1234 TQMTLNTFHLAGR-GEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAA 1292

Query: 3696 KLMKVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLT 3875
            KL KV+VAD+ ESMEV +VPF+V  +Q C++YKLKMKLY P LYP  + ISLEDCE+TL 
Sbjct: 1293 KLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLE 1352

Query: 3876 ILFVDELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXX 4055
             +FV ELE AI+ HLL+LSKI GIKN +  S S   +ETD D  G               
Sbjct: 1353 AVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGD---GLAGGNGDEDD 1409

Query: 4056 XXXXXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDA 4235
                      LG+DAQKRKQQ                ++GE  EGEPSAG   E+D V+ 
Sbjct: 1410 DGEDDGGAEDLGLDAQKRKQQASDEMDYG-------DSEGEPDEGEPSAGLTEEIDLVED 1462

Query: 4236 EVDNYIDGEVQIFDAEDESRQRSVSNPKSTEKKHKSEVKRKPTRAA--KSGDRSVFVEAK 4409
            EV+   + EV I D +DE  +    +  S  KK K+E KRK    A  K  DR++ V+AK
Sbjct: 1463 EVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAK 1522

Query: 4410 GLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI----------------- 4538
            G  FEVH RFT+EP+ILL++IAQKAA  VYI+ +G I+ C VI                 
Sbjct: 1523 GTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKR 1582

Query: 4539 ------EKDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQ 4700
                  EK K   LQTAGV+F AFWKMQ++LD+ ++ SN++HA+  T+GVEAARAT+IK+
Sbjct: 1583 ENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKE 1642

Query: 4701 VRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSRH-GMAVSTSPFSKMSYETAADFIIE 4877
            V  VF  +G+ VNIRHLSLIADFMT  G YRPM+RH G+A S SPFSKM++ETA+ FI+E
Sbjct: 1643 VFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVE 1702

Query: 4878 AAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            AA HG  D LES SARICLGLPVKMGTG FDLMQK++
Sbjct: 1703 AASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIE 1739


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1932 bits (5006), Expect = 0.0
 Identities = 1023/1721 (59%), Positives = 1232/1721 (71%), Gaps = 67/1721 (3%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            MAH  EG+TE VEAVKF   TDEEVRK+SF KIT+P + D +  P PGGLYDPALG +DE
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             TPC+SCGQRSF CPGHCGHIDLV  +Y            QK+CFFCH+FK    LV++ 
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 387  TSQLELIIKGDVVGAKNIAAQLSESLPCGEN---ETINMKDVTCHSETK---------HL 530
             SQLELI KGDVVGAKN+     +S+   E+   E  +   V+C S            HL
Sbjct: 121  VSQLELISKGDVVGAKNL-----DSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHL 175

Query: 531  ERSSWTSIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYM-NMSNKNTRANV 707
            ++  WTS+Q  EAMS++D FL           AKSP  T PTFGW +M  +S+  TRANV
Sbjct: 176  KQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANV 235

Query: 708  LHGSKLKQSFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHK 887
            + GSKL++   G                       VD+D+  SS A  D + D+ TK  +
Sbjct: 236  IRGSKLERPLNG-----------------------VDTDETHSSIAPTDGIQDTVTKRLE 272

Query: 888  KKGHSLPTEFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGN 1067
            +KG   P EF+KQ  FFSGPLLP+E    ++ LWENE  LCS ISDI Q+ L  S  +  
Sbjct: 273  RKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAG 332

Query: 1068 HSMFFIEALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVP 1247
            +SMFF+E +LVPPIKFRPPSKG  SVMEHPQT LL +VLQ N++LGNAH NNS+RS+++ 
Sbjct: 333  YSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIIS 392

Query: 1248 RWMELQQSVNVLFGNKKNIGQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISP 1424
            RWM+LQQS+NVLF  K   GQ + + G+GICQLLEKKEG+FRQK+MGKRVN+ACRSVISP
Sbjct: 393  RWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISP 452

Query: 1425 DPYLAVNEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLA 1604
            DPYLAVNEIGIPPYFALRLTYPE+VTPWN  KLR+AIINGPE+HPGATHY+DK + +KLA
Sbjct: 453  DPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLA 512

Query: 1605 QSRKSRNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIM 1784
             ++K R SISRKLPSSRGVV QPG+S ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIM
Sbjct: 513  VNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIM 572

Query: 1785 AHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPT 1964
            AHVVRVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNANNQYI+P+
Sbjct: 573  AHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPS 632

Query: 1965 SGDTKRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSIN 2144
             GD  RGLIQDHIVSAVLLTK+DTFLT ++YN LLYS+G+S    G+ IGK G+KV  ++
Sbjct: 633  RGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLS-SGSGSFIGKPGKKVSVLD 691

Query: 2145 SEDEMQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQ--- 2315
            SEDEMQ +LPAIWKP PLW+GKQVIT++LNH+TR  G +PFT +K   I +EYFGS+   
Sbjct: 692  SEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITR--GRKPFTTEKDGKIPREYFGSEIDE 749

Query: 2316 ----------------------SGEGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGS 2429
                                   GE KL IHKN  V GVIDK+QF KYGLVH VQELYGS
Sbjct: 750  KKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGS 809

Query: 2430 HTAGVLLSALSRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFDR--RVGEQVHAEFLG 2603
            +TAG+LLS LSRLFTVFLQMHGFTCGVDDLLI  + D+ RK   D+   +GE VH +F+G
Sbjct: 810  NTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIG 869

Query: 2604 YKDGDIDEMTLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLL 2783
               G ID + LQVE+EK++  NGE+A  RLD+MM +   +LT++VN  L        GL+
Sbjct: 870  SNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLK-----GLV 924

Query: 2784 KPFPRNCFFLMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSR 2963
            KPFP+NC  LMT +GAKGS VNF QISS LGQQ+LEGKRVPRM+SGKTLPCFPPWD ++R
Sbjct: 925  KPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAAR 984

Query: 2964 AGGFISDRYLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHT 3143
            AGGFISDR+LTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+T
Sbjct: 985  AGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYT 1044

Query: 3144 VRDADGSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIK 3323
            VRD+DGS+VQF YG+DGVDVH+TSF+++F+ LAVN++VV E+     + GKF   N YI+
Sbjct: 1045 VRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFG---QDGKF---NGYIQ 1098

Query: 3324 ELPEALEKSTKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSI 3503
            +LP+ L K TK FI     +       +K K              A+PGEPVGV+AAQS+
Sbjct: 1099 KLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSV 1158

Query: 3504 GEPSTQMTLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDAD 3683
            GEPSTQMTLNTFH AG+ GEVNVTLGIPRLQEILM A+ +I+TP+MTCPL  G+++DDA+
Sbjct: 1159 GEPSTQMTLNTFHLAGR-GEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAE 1217

Query: 3684 RLAAKLMKVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCE 3863
            RLAAKL KV+VAD+ ESMEV +VPF+V  +Q C++YKLKMKLY P LYP  + ISLEDCE
Sbjct: 1218 RLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCE 1277

Query: 3864 KTLTILFVDELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXX 4043
            +TL  +FV ELE AI+ HLL+LSKI GIKN +  S S   +ETD D  G           
Sbjct: 1278 ETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGD---GLAGGNG 1334

Query: 4044 XXXXXXXXXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVD 4223
                          LG+DAQKRKQQ                ++GE  EGEPSAG   E+D
Sbjct: 1335 DEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYG-------DSEGEPDEGEPSAGLTEEID 1387

Query: 4224 QVDAEVDNYIDGEVQIFDAEDESRQRSVSNPKSTEKKHKSEVKRKPTRAA--KSGDRSVF 4397
             V+ EV+   + EV I D +DE  +    +  S  KK K+E KRK    A  K  DR++ 
Sbjct: 1388 LVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAIL 1447

Query: 4398 VEAKGLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI------------- 4538
            V+AKG  FEVH RFT+EP+ILL++IAQKAA  VYI+ +G I+ C VI             
Sbjct: 1448 VKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRD 1507

Query: 4539 ----------EKDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARAT 4688
                      EK K   LQTAGV+F AFWKMQ++LD+ ++ SN++HA+  T+GVEAARAT
Sbjct: 1508 PKKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARAT 1567

Query: 4689 LIKQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSRH-GMAVSTSPFSKMSYETAAD 4865
            +IK+V  VF  +G+ VNIRHLSLIADFMT  G YRPM+RH G+A S SPFSKM++ETA+ 
Sbjct: 1568 IIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASK 1627

Query: 4866 FIIEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            FI+EAA HG  D LES SARICLGLPVKMGTG FDLMQK++
Sbjct: 1628 FIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIE 1668


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1779 bits (4607), Expect = 0.0
 Identities = 961/1730 (55%), Positives = 1203/1730 (69%), Gaps = 76/1730 (4%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            ++  ++G+TE ++++ F  LTDEEVRKHSFVKITNP L D ++ P PGGLYDPALGPL E
Sbjct: 4    ISSVSKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSE 63

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             T C++CGQRS  CPGHCGHIDLV P+Y            Q++CF C +F+ +   VE+C
Sbjct: 64   RTICKTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKC 123

Query: 387  TSQLELIIKGDVVGAKNI-AAQLSESLPCGENETINMKDVTCHS-----ETKHLERSSWT 548
              QLELI+KGD+VGAK + +   SE+L   E++  +    T HS     + +H  +  WT
Sbjct: 124  IKQLELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWT 183

Query: 549  SIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKL 725
            S+Q  EAMS+L+ FL           + +P  T PTFGW + + MS+ + RANV+ G +L
Sbjct: 184  SLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQL 243

Query: 726  KQSFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSL 905
                          GG+           I  + DVE +    D+   S TK HKKK    
Sbjct: 244  --------------GGL-------LGSEIEGTTDVEDAAEPGDQ--HSGTKKHKKKERKE 280

Query: 906  PTEFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFI 1085
              EF +Q   FS  LLP+E    +++LW+NE R+CS ISD+QQ      +++   +MFF+
Sbjct: 281  VLEFTRQKSTFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQEF--GKRKAGPAMFFL 338

Query: 1086 EALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQ 1265
            E +LVPPIKFRPP+KGG SVMEHPQT LLS+VLQ N+SLG+AH+N  + S++V RW++LQ
Sbjct: 339  ETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQ 397

Query: 1266 QSVNVLFGNK--KNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLA 1439
            QS+N LF +K  K  GQR+ A  GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPY+ 
Sbjct: 398  QSINTLFDSKTAKGPGQREGA-PGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIG 456

Query: 1440 VNEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKS 1619
            VNEIGIPP FA++LTYPERVTPWN  KLRNA+ING E HPGATHY+DK +  KL  +RK+
Sbjct: 457  VNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKA 516

Query: 1620 RNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVR 1799
            R SISRKLPSSRG V Q GK  E E EGK+VYRHLQDGDVVLVNRQPTLHKPSIMAHVVR
Sbjct: 517  RISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVR 576

Query: 1800 VLKGEKTIRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDT 1976
            VLKGEKT+RMHYANCS TYNADFDGDEMNVHFPQDE+SRAEA NIVNANNQ++ P++G+ 
Sbjct: 577  VLKGEKTLRMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEP 636

Query: 1977 KRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDE 2156
             RGLIQDHIVSAVLLTK+DTFL+ DE+N LLYS+GVS V   +  G+ GQKV    SEDE
Sbjct: 637  LRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDE 696

Query: 2157 MQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQSGEG--- 2327
            +Q + PAIWKP PLWTGKQVIT++LNH+T      PFTV+K + I   +F S++ E    
Sbjct: 697  IQTLPPAIWKPKPLWTGKQVITAILNHIT--SDHPPFTVEKDAKIPSNFFKSRANEDKPC 754

Query: 2328 ------------------KLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLS 2453
                              K+ ++KN  V GVIDK QFG+YGLVHTV EL GSHTAG+LLS
Sbjct: 755  QEEKSDKDAPAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLS 814

Query: 2454 ALSRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYKDG--DI 2621
             LSRLFT +LQMHGFTCGVDDLLI+ + D ERKK  +   + GE VH  F+G KD    I
Sbjct: 815  VLSRLFTAYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKI 874

Query: 2622 DEMTLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFP---SNSSPVGLLKPF 2792
            D + +Q+ +EK +R +G+SA A LD+ MS       NE+N K      SN    GLLKP 
Sbjct: 875  DPVAMQLNIEKTIRSDGDSALAYLDRQMS-------NELNTKTSSGVISNLLSDGLLKPS 927

Query: 2793 PRNCFFLMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGG 2972
             +NC  LMT SGAKGS+VNFQQISS LGQQELEGKRVPRM+SGKTLPCF PWD ++R+GG
Sbjct: 928  GKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGG 987

Query: 2973 FISDRYLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRD 3152
            +I+DR+LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRD
Sbjct: 988  YITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRD 1047

Query: 3153 ADGSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELP 3332
            ADGSVVQF+YGEDGVDVH+TSF++KFK LA+NQ ++ +R   Q   G F   N YI ELP
Sbjct: 1048 ADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQL--GAF---NSYISELP 1102

Query: 3333 EALEKSTKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEP 3512
            EAL++    F++  S+    +    K + +            A+PGEPVGV+AAQS+GEP
Sbjct: 1103 EALKEKADRFLDDFSIMGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEP 1162

Query: 3513 STQMTLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLA 3692
            STQMTLNTFH AG+ GE+NVTLGIPRLQEILM AS +I+TP+MTCPL +G+T +DAD LA
Sbjct: 1163 STQMTLNTFHLAGR-GEMNVTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLA 1221

Query: 3693 AKLMKVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTL 3872
             KL KV+VAD+VESMEV VVPF++     C +YKLKMKLY P  YP++++IS+ED E+TL
Sbjct: 1222 DKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETL 1281

Query: 3873 TILFVDELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGS-KHKQXXXXXXXX 4049
             ++F+ ELE AI+ H+ +LS+I GIK+ +  S S    E D D  G   H++        
Sbjct: 1282 EVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDMSHRE----ERDD 1337

Query: 4050 XXXXXXXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQV 4229
                        LG+DAQKRK Q              ++ +GE+   E  +G ESE+DQ 
Sbjct: 1338 DNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELN-EGESTASEEESGFESEIDQG 1396

Query: 4230 DAEV----DNYIDGEVQIF-----DAEDESRQRSVSNP----KSTEKKHKSEVKRKPTRA 4370
            D E     D  +D E          ++ +S++++  +P    KS +KK K + KRK +R 
Sbjct: 1397 DNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRK-SRI 1455

Query: 4371 AKSGDRSVFVEAKGLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVIE--- 4541
            +K  DR++FVEA+ + FEVH +FT+EP+ILL+EIAQK AK VYI+  G I QC V +   
Sbjct: 1456 SKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKE 1515

Query: 4542 --------------------KDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQT 4661
                                K+K   L   GV+F  FWKMQ+ LD+ +I SN+IHA+ +T
Sbjct: 1516 SQVIYYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKT 1575

Query: 4662 YGVEAARATLIKQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSR-HGMAVSTSPFS 4838
            YGVEAAR T+I+++  VF+ +GI+V+ RHLSLIADFMT  G YRPMSR  G+A S SPFS
Sbjct: 1576 YGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFS 1635

Query: 4839 KMSYETAADFIIEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            KMS+ETA+ FI+EAA HGE+D LE+PSARICLGLPVKMGTGSFDLMQK++
Sbjct: 1636 KMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLE 1685


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 1768 bits (4579), Expect = 0.0
 Identities = 950/1720 (55%), Positives = 1184/1720 (68%), Gaps = 66/1720 (3%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            MA  TEG+T+ VEAV+F  +T EEVRKHSF+K+TN  L D +D P PGGLYD  LGPL++
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             TPC+SCG     CPGHCGHIDLV PIY            Q+ CFFC++F+ E   VE+C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 387  TSQLELIIKGDVVGAKNIAAQLSESLPCGENETINMKDVTCHSETKHLERSSWTSIQHGE 566
             SQL+LI  GD+VGAK + +  +++    +    + +  +    ++ ++   WTS+Q  E
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKPKEWTSLQLME 180

Query: 567  AMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKLKQSFLG 743
            AMS+L+ FL           AK+P  T P FGW++MN M     R NV+ G K+  +F  
Sbjct: 181  AMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSD 240

Query: 744  EGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPTEFLK 923
            E     +  G+E   D+ +SGN VD  ++++S   +     +  K  KKK   +P EF+K
Sbjct: 241  E-----AGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQ-VPLEFMK 294

Query: 924  QMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEALLVP 1103
            Q   FSGPLLP+E     K+LWENE  LCS+ISDIQQ G     K+  +SMFF+E +LVP
Sbjct: 295  QKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVP 351

Query: 1104 PIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPR-WMELQQSVNV 1280
            PIKFR P+KGG SVMEHPQT LLS+VLQ N+SLGNA+ NN Q S+ V R WM+LQQSVN+
Sbjct: 352  PIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNL 411

Query: 1281 LFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEIGIP 1460
            LF +K  + Q  +  +GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIP
Sbjct: 412  LFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIP 471

Query: 1461 PYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSISRK 1640
            PYFALRLTYPERVTPWN  KLR AIING E HPGATHY+DK +  +L  S+K+R SISRK
Sbjct: 472  PYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRK 531

Query: 1641 LPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 1820
            LPSSRG + QPGK+L++E EGK+V RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT
Sbjct: 532  LPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 591

Query: 1821 IRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLIQDH 2000
            IRMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ P++G+  R LIQDH
Sbjct: 592  IRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDH 651

Query: 2001 IVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHVLPAI 2180
            IVSAVLLTKRDTFL+ DE+N LLYS+GVS +AQ +  GK GQKV    SE+ M  ++PAI
Sbjct: 652  IVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAI 711

Query: 2181 WKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQSG------------- 2321
             KP PLWTGKQVI+S+L+H+TR  G  PFTV K + I +++F ++               
Sbjct: 712  LKPKPLWTGKQVISSVLSHITR--GRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQPK 769

Query: 2322 ------------------EGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVL 2447
                              E K+ I++N  V GVIDK+QF  YGLVHTVQELYGS+TAG+L
Sbjct: 770  NDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGIL 829

Query: 2448 LSALSRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFD---RRVGEQVHAEFLGYKDGD 2618
            LS  SRLFTVFLQMHGFTCGVDDLLI++  D+ERKK  +   ++V E  H E  G K   
Sbjct: 830  LSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTE-AHYELFGVKVNS 888

Query: 2619 IDEMTLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPR 2798
              E  LQ+E+E+ +R +GE+A   LD+ M S    + NE + K   +     GL+K    
Sbjct: 889  --ETELQLEIERTIRRDGETALTALDRKMIS----VLNENSSKGVLTELLSEGLVKSMGE 942

Query: 2799 NCFFLMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFI 2978
            NC  LMT SGAKGS+VNFQQISS LGQQELEGKRVPRM+SGKTLPCF PWD ++RAGGFI
Sbjct: 943  NCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFI 1002

Query: 2979 SDRYLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDAD 3158
            SDR+L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDAD
Sbjct: 1003 SDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDAD 1062

Query: 3159 GSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEA 3338
            GS+VQF YGEDG+DVH+TSF++KF+ LA+NQ ++ E+L  Q  +      +D  K LP+ 
Sbjct: 1063 GSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE-----PDDSDKILPDG 1117

Query: 3339 LEKSTKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPST 3518
            L    + FI +   K+   ++  KPK              A+PGEPVGV+AAQS+GEPST
Sbjct: 1118 LRSKAEQFIREEIKKYQHQKI--KPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPST 1175

Query: 3519 QMTLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAK 3698
            QMTLNTFH AG+ GE+NVTLGIPRLQEILM AS +I+TPVMTCPL KGKT++DA  LA K
Sbjct: 1176 QMTLNTFHLAGR-GEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANK 1234

Query: 3699 LMKVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTI 3878
            + K++VAD++ESMEV V PF+V     C++YKLKM L  P+ Y   SDI+++DCE  L +
Sbjct: 1235 MKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKV 1294

Query: 3879 LFVDELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXX 4058
            +F+ ELE AI+ HL++LSKI GIK  +  S+ +   E D D    + ++           
Sbjct: 1295 VFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDD 1354

Query: 4059 XXXXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDAE 4238
                     LG+DAQK+KQQ                ++ E  EG   A  ESE+D  + E
Sbjct: 1355 ADDEERAEDLGLDAQKQKQQTTDEMDYED------DSEVEQNEGASLAALESEIDMSEDE 1408

Query: 4239 VDNYIDGEVQIFDAEDESRQRSV-----SNPKSTEKKHKSEVKRKPTRA---AKSGDRSV 4394
                    +   + +DE  Q S      SNPKS E+K  SE KRK  +A    K  DR++
Sbjct: 1409 TGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1468

Query: 4395 FVEAKGLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI------------ 4538
            F   +GL FEVH +  +EP+ILL++IA+K AK VYI+  G I+QC V             
Sbjct: 1469 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1528

Query: 4539 ---------EKDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATL 4691
                     +K+K   L T GV+F AFWKM++ +D+ ++ SN IHA+  TYGVEAAR T+
Sbjct: 1529 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1588

Query: 4692 IKQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSR-HGMAVSTSPFSKMSYETAADF 4868
            I+++  VF  +GI+VNIRHL+LIADFMT  GRYRPMSR  G+A S SPFSKMS+ETA+ F
Sbjct: 1589 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1648

Query: 4869 IIEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            I+EAA HG VD LE+PS+RICLGLPVKMGTGSFDLMQKV+
Sbjct: 1649 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1688


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score = 1744 bits (4516), Expect = 0.0
 Identities = 938/1720 (54%), Positives = 1174/1720 (68%), Gaps = 66/1720 (3%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            MA  TEG+T+ VEAV+F  +T EEVRKHSF+K+TN  L D +D P PGGLYD  LGPL++
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             TPC+SCG     CPGHCGHIDLV PIY            Q+ CFFC++F+ E   VE+C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 387  TSQLELIIKGDVVGAKNIAAQLSESLPCGENETINMKDVTCHSETKHLERSSWTSIQHGE 566
             SQL+LI  GD+VGAK + +  +++    +    + +  +    ++ ++   WTS+Q  E
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKPKEWTSLQLME 180

Query: 567  AMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKLKQSFLG 743
            AMS+L+ FL           AK+P  T P FGW++MN M     R NV+ G K+  +F  
Sbjct: 181  AMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSD 240

Query: 744  EGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPTEFLK 923
            E     +  G+E   D+ +SGN VD  ++++S   +     +  K  KKK   +P EF+K
Sbjct: 241  E-----AGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQ-VPLEFMK 294

Query: 924  QMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEALLVP 1103
            Q   FSGPLLP+E     K+LWENE  LCS+ISDIQQ G     K+  +SMFF+E +LVP
Sbjct: 295  QKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILVP 351

Query: 1104 PIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPR-WMELQQSVNV 1280
            PIKFR P+KGG SVMEHPQT LLS+VLQ N+SLGNA+ NN Q S+ V R WM+LQQSVN+
Sbjct: 352  PIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVNL 411

Query: 1281 LFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEIGIP 1460
            LF +K  + Q  +  +GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIP
Sbjct: 412  LFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIP 471

Query: 1461 PYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSISRK 1640
            PYFALRLTYPERVTPWN  KLR AIING E HPGATHY+DK +  +L  S+K+R SISRK
Sbjct: 472  PYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISRK 531

Query: 1641 LPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 1820
            LPSSRG + QPGK+L++E EGK+V RHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT
Sbjct: 532  LPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 591

Query: 1821 IRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLIQDH 2000
            IRMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ P++G+  R LIQDH
Sbjct: 592  IRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQDH 651

Query: 2001 IVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHVLPAI 2180
            IVSAVLLTKRDTFL+ DE+N LLYS+GVS +AQ +  GK GQKV    SE+ M  ++PAI
Sbjct: 652  IVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPAI 711

Query: 2181 WKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGS---------------- 2312
             KP PLWTGKQVI+S+L+H+TR  G  PFTV K + I +++F +                
Sbjct: 712  LKPKPLWTGKQVISSVLSHITR--GRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQPK 769

Query: 2313 ---------------QSGEGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVL 2447
                           +  E K+ I++N  V GVIDK+QF  YGLVHTVQELYGS+TAG+L
Sbjct: 770  NDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGIL 829

Query: 2448 LSALSRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYK-DGD 2618
            LS  SRLFTVFLQMHGFTCGVDDLLI++  D+ERKK  +   +   + H E  G K + +
Sbjct: 830  LSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNSE 889

Query: 2619 IDEMTLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPR 2798
                 LQ+E+E+ +R +GE+A   LD+ M S    + NE + K   +     GL+K    
Sbjct: 890  TAPTELQLEIERTIRRDGETALTALDRKMIS----VLNENSSKGVLTELLSEGLVKSMGE 945

Query: 2799 NCFFLMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFI 2978
            NC  LMT SGAKGS+VNFQQISS LGQQELEGKRVPRM+SGKTLPCF PWD ++RAGGFI
Sbjct: 946  NCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFI 1005

Query: 2979 SDRYLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDAD 3158
            SDR+L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDAD
Sbjct: 1006 SDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDAD 1065

Query: 3159 GSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEA 3338
            GS+VQF YGEDG+DVH+TSF++KF+ LA+NQ ++ E+L  Q  +      +D  K LP+ 
Sbjct: 1066 GSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE-----PDDSDKILPDG 1120

Query: 3339 LEKSTKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPST 3518
            L    + FI +   K+   ++  KPK              A+PGEPVGV+AAQS+GEPST
Sbjct: 1121 LRSKAEQFIREEIKKYQHQKI--KPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPST 1178

Query: 3519 QMTLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAK 3698
            QMTLNTFH AG+ GE+NVTLGIPRLQEILM AS +I+TPVMTCPL KGKT++DA  LA K
Sbjct: 1179 QMTLNTFHLAGR-GEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANK 1237

Query: 3699 LMKVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTI 3878
            + K++VAD++ESMEV V PF+V     C++YKLKM L  P+ Y   SDI+++DCE  L +
Sbjct: 1238 MKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKV 1297

Query: 3879 LFVDELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXX 4058
            +F+ ELE AI+ HL++LSKI GIK  +  S+ +   E D D    + ++           
Sbjct: 1298 VFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDD- 1356

Query: 4059 XXXXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDAE 4238
                        D ++R + +                      G   A  ESE+D  + E
Sbjct: 1357 ----------DADDEERAEDL----------------------GASLAALESEIDMSEDE 1384

Query: 4239 VDNYIDGEVQIFDAEDESRQRSV-----SNPKSTEKKHKSEVKRKPTRA---AKSGDRSV 4394
                    +   + +DE  Q S      SNPKS E+K  SE KRK  +A    K  DR++
Sbjct: 1385 TGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1444

Query: 4395 FVEAKGLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI------------ 4538
            F   +GL FEVH +  +EP+ILL++IA+K AK VYI+  G I+QC V             
Sbjct: 1445 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1504

Query: 4539 ---------EKDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATL 4691
                     +K+K   L T GV+F AFWKM++ +D+ ++ SN IHA+  TYGVEAAR T+
Sbjct: 1505 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1564

Query: 4692 IKQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSR-HGMAVSTSPFSKMSYETAADF 4868
            I+++  VF  +GI+VNIRHL+LIADFMT  GRYRPMSR  G+A S SPFSKMS+ETA+ F
Sbjct: 1565 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1624

Query: 4869 IIEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            I+EAA HG VD LE+PS+RICLGLPVKMGTGSFDLMQKV+
Sbjct: 1625 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1664


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score = 1724 bits (4465), Expect = 0.0
 Identities = 949/1760 (53%), Positives = 1185/1760 (67%), Gaps = 106/1760 (6%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            M  TTE +TE V+AV F  LTDEEVRK SF+K+T P L D +  P PGGLYDP LGPLDE
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLTEPLLLDRVSRPLPGGLYDPILGPLDE 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             + C++CGQR F CPGH GHIDLV+ +Y            ++ CFFCH+FK     VE+C
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 387  TSQLELIIKGDVVGAKNIAAQLSESLPCGENETINMKDVTC--------HSETKHLERSS 542
              +LELIIKGD++ AK++   L       E+  ++ K  +C        +   ++L+   
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKS-SCSMVTPRGNYDNVRNLKPQE 179

Query: 543  WTSIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGS 719
            WTS+Q  EA   L  FL           AK+P  + PTFGWI+MN M + + RAN++ G 
Sbjct: 180  WTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGC 239

Query: 720  KLKQSFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGH 899
             L ++F G  E+K          DL  S + VD+ +  S    +    D+A + H+K   
Sbjct: 240  NLGETFSGGEEEK----------DLGTSSD-VDAPETHSFNGAFPGTQDTAARRHQKGSG 288

Query: 900  SLPTEFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMF 1079
            ++P+ F KQ   FSGPLLP++    I+ LWENE  LCS ISD+QQ G     K+  HS+F
Sbjct: 289  AVPSGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIF 345

Query: 1080 FIEALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRV-VPRWM 1256
            F+  +LVPPIKFR PSKGG SVMEHPQT LLS+VLQ N+ L NA++N    ++V V RWM
Sbjct: 346  FLGVVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKVIVARWM 405

Query: 1257 ELQQSVNVLFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYL 1436
             LQQSVNVLF  K   GQRD A +GICQLLEKKEG+FRQKLMGKRVNYACRSVISPDPYL
Sbjct: 406  NLQQSVNVLFDGKNAAGQRDVA-SGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYL 464

Query: 1437 AVNEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRK 1616
            AVNEIGIPPYFALRLTYPERVTPWN  KLR++IING E+HPGATHY+DK + ++L  ++K
Sbjct: 465  AVNEIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKK 524

Query: 1617 SRNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVV 1796
             R SI RKL +SRG ++QPGK  ++E EGK+VYRHLQDGDVVLVNRQPTLHKPSIMAHVV
Sbjct: 525  MRISIGRKLDTSRGAIVQPGKDSDNEFEGKMVYRHLQDGDVVLVNRQPTLHKPSIMAHVV 584

Query: 1797 RVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDT 1976
            RVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA NIVNANNQY+ P++GD 
Sbjct: 585  RVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDP 644

Query: 1977 KRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDE 2156
             R LIQDHIVSA LLTK+DTFL  DE+  LLYS+GVS    G+  GK GQ+V    SE E
Sbjct: 645  LRSLIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQE 704

Query: 2157 MQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGS------QS 2318
            +  +LPAIWKP PLWTGKQVIT++LNH+TR  G  PF V++   + +++F +      QS
Sbjct: 705  VLPLLPAIWKPEPLWTGKQVITAVLNHITR--GRPPFIVERGGKLPQDFFKTRFNADKQS 762

Query: 2319 G------------------------------------------------EGKLFIHKNYF 2354
            G                                                E KL I+KN  
Sbjct: 763  GRKKNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDL 822

Query: 2355 VHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVFLQMHGFTCGVDDLLIVKS 2534
            V GVIDK+QF  YGLVHTVQELYGS+TAG LLSALSRLFTVFLQMHGFTCGVDDLLI+K 
Sbjct: 823  VRGVIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKD 882

Query: 2535 LDLERKKIF--DRRVGEQVHAEFLGYKDG-DIDEMTLQVEMEKVMRVNGESATARLDKMM 2705
             + ERK        +G++VH E L  +DG +ID + L+ E+EK MR  G++A A  D  M
Sbjct: 883  KERERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKM 942

Query: 2706 SSRNAKLTNE--VNDKLFPSNSSPVGLLKPFPRNCFFLMTASGAKGSQVNFQQISSLLGQ 2879
            +S+  K T+   +ND L        GLLKP  +N   LMT SGAKGS+VNFQQISS LGQ
Sbjct: 943  TSQLNKHTSSSVINDLLSE------GLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQ 996

Query: 2880 QELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRPQEYYFHCMAGREGLVDT 3059
            QELEGKRVPRM+SGKTLP F PWD + RAGGFI DR+LTGLRPQEYYFHCMAGREGLVDT
Sbjct: 997  QELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDT 1056

Query: 3060 AVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGEDGVDVHKTSFLSKFKTL 3239
            AVKTSRSGYLQRCL+K+LECLK+ YD++VRDADGS+VQF YGEDGVDVH+TSF+SKF  L
Sbjct: 1057 AVKTSRSGYLQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDAL 1116

Query: 3240 AVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKSTKDFINKLSVKHHSSRLSRKPKG 3419
            A NQ+++ ++ + Q +      SN YI ELP+AL    KD   K + K  S+ +++  + 
Sbjct: 1117 AANQEMIYKKCSGQLDA-----SNAYIMELPDAL----KDNAEKFADKFLSNEMAK--QD 1165

Query: 3420 IXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLNTFHHAGQGGEVNVTLGIPRLQE 3599
                         A+PGEPVG++AAQS+GEPSTQMTLNTFH AG+ GE+NVTLGIPRLQE
Sbjct: 1166 FLKLVKHKFVLSLAQPGEPVGLLAAQSVGEPSTQMTLNTFHLAGR-GEMNVTLGIPRLQE 1224

Query: 3600 ILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVSVADLVESMEVCVVPFSVHKNQA 3779
            IL  AS++I+TPV+TCPL  GKT DDA RLA KL K++VAD+V+ + V V  F+ H  QA
Sbjct: 1225 ILTIASKDIKTPVITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQA 1284

Query: 3780 CTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVDELEKAIRAHLLMLSKIGGIKNIV 3959
            CT+Y L M+LY P+ YP ++DI+LED E+ L ++FV ELE  I+ HLL+LSKI GIKN+ 
Sbjct: 1285 CTVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVA 1344

Query: 3960 QRSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXXXXXXXXXLGVDAQKRKQQVKXXXXX 4139
                     ETD +  G+  +                     LG+DA K+KQ+       
Sbjct: 1345 SGLTQKASNETDQEGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDY 1401

Query: 4140 XXXXXXXISTDGENIEGEPSAGSESEVDQVDAEVDNYIDGEVQIFD----AEDESRQRSV 4307
                     ++GE  +G  +AG  SE+DQ ++E+D+    E +I D     E E+ Q   
Sbjct: 1402 ED------GSEGEMNDGVSAAGFGSEIDQAESEIDD-DQAETEIEDDRATNEIENSQDQA 1454

Query: 4308 S------NPKSTEKKHKSEVKRKPTRA---AKSGDRSVFVEAKGLDFEVHLRFTDEPYIL 4460
            S       PKS++KK KS+ KRK  RA    K  DR+++V A+G+ FE H +F +EP IL
Sbjct: 1455 SENLKPFTPKSSKKKSKSKTKRKKARAKLVKKDTDRAIYVAARGMHFEAHFKFINEPNIL 1514

Query: 4461 LSEIAQKAAKNVYIKRAGNINQCSVI-----------------------EKDKEYQLQTA 4571
            L++IA+  AK VYI+ +G I+QC V                        EK+K   L T 
Sbjct: 1515 LAQIARHVAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKKREDIKPEEKEKVQALHTT 1574

Query: 4572 GVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVFEDHGISVNIRHL 4751
            GV+F AFW++Q+ +D+ +I SN+I A+ +TYGVEAAR T+I++++ VF  +GISVN RHL
Sbjct: 1575 GVDFHAFWQLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHL 1634

Query: 4752 SLIADFMTQQGRYRPMSR-HGMAVSTSPFSKMSYETAADFIIEAAYHGEVDYLESPSARI 4928
            SLIADFMT  G YRPMSR  G+A S SPFSKM++E A+ FI+EAA +G+VD L++PSARI
Sbjct: 1635 SLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFEIASKFIVEAASYGQVDKLDTPSARI 1694

Query: 4929 CLGLPVKMGTGSFDLMQKVQ 4988
            CLGLPVKMGTGSFDLMQK++
Sbjct: 1695 CLGLPVKMGTGSFDLMQKLE 1714


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score = 1722 bits (4460), Expect = 0.0
 Identities = 947/1759 (53%), Positives = 1184/1759 (67%), Gaps = 105/1759 (5%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            M  TTE +TE V+AV F  LTDEEVRK SF+K+  P L D +  P PGGLYDP LGPLDE
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLKEPLLLDRVGRPLPGGLYDPILGPLDE 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             + C++CGQR F CPGH GHIDLV+P+Y            ++ CFFCH+FK     VE+C
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 387  TSQLELIIKGDVVGAKNIAAQLSESLPCGENETINMKDVTC--------HSETKHLERSS 542
              +LELIIKGD++ AK++   L       E+  ++ K  +C        +   ++L+   
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKS-SCSMVTPRGNYDNVRNLKPQE 179

Query: 543  WTSIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGS 719
            WTS+Q  EA   L  FL           AK+P  + PTFGWI+MN M + + RAN++ G 
Sbjct: 180  WTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGC 239

Query: 720  KLKQSFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGH 899
             L ++F G  E+K          DL AS + VD+ +  S    +    D+A + H+K   
Sbjct: 240  NLGETFSGGEEEK----------DLGASSD-VDAPETHSFNGTFPGTQDTAARRHQKGSG 288

Query: 900  SLPTEFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMF 1079
            ++P+ F KQ   FSGPLLP++    I+ LWENE  LCS ISD+QQ G     K+  HS+F
Sbjct: 289  AVPSGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIF 345

Query: 1080 FIEALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRV-VPRWM 1256
            F+ A+LVPPIKFR PSKGG SVMEHPQT LLS+VLQ N+ L NA++N    +++ V RWM
Sbjct: 346  FLGAVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKIIVTRWM 405

Query: 1257 ELQQSVNVLFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYL 1436
             LQQSVNVLF  K   GQRD A +GICQLLEKKEG+FRQKLMGKRVNYACRSVISPDPYL
Sbjct: 406  NLQQSVNVLFDGKNAAGQRDMA-SGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYL 464

Query: 1437 AVNEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRK 1616
            AVNEIGIPPYFALRLTYPERVTPWN  KLR++IING E+HPGATHY+DK + ++L  ++K
Sbjct: 465  AVNEIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKK 524

Query: 1617 SRNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVV 1796
             R SI+RKL +SRG ++QPGK  ++E EGK+VYRHLQDGDVVLVNRQPTLHKPSIMAHVV
Sbjct: 525  MRISIARKLDTSRGAIVQPGKDSDNEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVV 584

Query: 1797 RVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDT 1976
            RVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA NIVNANNQY+ P++GD 
Sbjct: 585  RVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDP 644

Query: 1977 KRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDE 2156
             R LIQDHIVSA LLTK+DTFL  DE+  LLYS+GVS    G+  GK GQ+V    SE E
Sbjct: 645  LRSLIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQE 704

Query: 2157 MQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTI--------------- 2291
            +  +LPAIWKP PLWTGKQVIT++LNH+TR  G  PF V++   +               
Sbjct: 705  VLPLLPAIWKPEPLWTGKQVITAVLNHITR--GRPPFVVERGGKLPQDFFKTRFNADKQS 762

Query: 2292 -----------------------RKEYFGSQSGEGK----------------LFIHKNYF 2354
                                   +KE    + GE K                L I+KN  
Sbjct: 763  DRKKNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDL 822

Query: 2355 VHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVFLQMHGFTCGVDDLLIVKS 2534
            V GVIDK+QF  YGLVHTVQELYGS+TAG LLSALSRLFTVFLQMHGFTCGVDDLLI+K 
Sbjct: 823  VRGVIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKD 882

Query: 2535 LDLERKKIF--DRRVGEQVHAEFLGYKDG-DIDEMTLQVEMEKVMRVNGESATARLD-KM 2702
             + ERK        +G++VH E L  +DG +ID + L+ E+EK MR  G++A A  D KM
Sbjct: 883  KERERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKM 942

Query: 2703 MSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFLMTASGAKGSQVNFQQISSLLGQQ 2882
             S  N   ++ V ++L        GLLKP  +N   LMT SGAKGS+VNFQQISS LGQQ
Sbjct: 943  TSQLNKHTSSSVINELLSE-----GLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQ 997

Query: 2883 ELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRPQEYYFHCMAGREGLVDTA 3062
            ELEGKRVPRM+SGKTLP F PWD + RAGGFI DR+LTGLRPQEYYFHCMAGREGLVDTA
Sbjct: 998  ELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTA 1057

Query: 3063 VKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGEDGVDVHKTSFLSKFKTLA 3242
            VKTSRSGYLQRCL+K+LECLK+ YD++VRDADGS+VQF YGEDGVDVH+TSF+SKF  LA
Sbjct: 1058 VKTSRSGYLQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALA 1117

Query: 3243 VNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKSTKDFINKLSVKHHSSRLSRKPKGI 3422
             NQ+++ ++ + Q +      SN YI ELP+AL    KD   K + K  S+ +++  +  
Sbjct: 1118 ANQEMIYKKCSGQLDA-----SNAYIMELPDAL----KDNAEKFADKFLSNEMAK--QDF 1166

Query: 3423 XXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLNTFHHAGQGGEVNVTLGIPRLQEI 3602
                        A+PGEPVG++A+QS+GEPSTQMTLNTFH AG+ GE+NVTLGIPRLQEI
Sbjct: 1167 LKLVKHKFVLSLAQPGEPVGLLASQSVGEPSTQMTLNTFHLAGR-GEMNVTLGIPRLQEI 1225

Query: 3603 LMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVSVADLVESMEVCVVPFSVHKNQAC 3782
            L  AS++I+TPV+TCPL  GKT DDA RLA KL K++VAD+V+ + V V  F+ H  QAC
Sbjct: 1226 LTIASKDIKTPVITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQAC 1285

Query: 3783 TLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVDELEKAIRAHLLMLSKIGGIKNIVQ 3962
            ++Y L M+LY P+ YP ++DI+LED E+ L ++FV ELE  I+ HLL+LSKI GIKN+  
Sbjct: 1286 SVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVAS 1345

Query: 3963 RSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXXXXXXXXXLGVDAQKRKQQVKXXXXXX 4142
                    ETD D  G+  +                     LG+DA K+KQ+        
Sbjct: 1346 GLTQKASNETDQDGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYE 1402

Query: 4143 XXXXXXISTDGENIEGEPSAGSESEVDQVDAEVDNYIDGEVQIFD----AEDESRQRSVS 4310
                    ++ E  +G  +AG  SE+DQ ++E+D+    E +I D     E E+ Q   S
Sbjct: 1403 D------GSEEEMNDGVSAAGFGSEIDQAESEIDD-DQAETEIEDDRATNEIETSQDQAS 1455

Query: 4311 ------NPKSTEKKHKSEVKRKPTRA---AKSGDRSVFVEAKGLDFEVHLRFTDEPYILL 4463
                   PKS++KK KS+ KRK  RA    K  DR+++V A+G+ FE H +F +EP ILL
Sbjct: 1456 ENLKPFTPKSSKKKSKSKSKRKKARAKLVKKDTDRAIYVAARGMHFEAHFKFINEPNILL 1515

Query: 4464 SEIAQKAAKNVYIKRAGNINQCSVI-----------------------EKDKEYQLQTAG 4574
            ++IA+  AK VYI+ +G I+QC V                        EK+K   L T G
Sbjct: 1516 AQIARHVAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKTREDIKPEEKEKVQALHTTG 1575

Query: 4575 VNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVFEDHGISVNIRHLS 4754
            V+F AFW++Q+ +D+ +I SN+I A+ +TYGVEAAR T+I++++ VF  +GISVN RHLS
Sbjct: 1576 VDFHAFWRLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHLS 1635

Query: 4755 LIADFMTQQGRYRPMSR-HGMAVSTSPFSKMSYETAADFIIEAAYHGEVDYLESPSARIC 4931
            LIADFMT  G YRPMSR  G+A S SPFSKM++ETA+ FI+EAA +G+VD L++PSARIC
Sbjct: 1636 LIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFETASKFIVEAASYGQVDKLDTPSARIC 1695

Query: 4932 LGLPVKMGTGSFDLMQKVQ 4988
            LGLPVKMGTGSFDLMQK++
Sbjct: 1696 LGLPVKMGTGSFDLMQKLE 1714


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 1687 bits (4368), Expect = 0.0
 Identities = 923/1715 (53%), Positives = 1159/1715 (67%), Gaps = 61/1715 (3%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            M  TTEG+T  VEAV F  LTD+E+R+ S VKIT+P L D L  P P GLYD ALGP D+
Sbjct: 1    MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             + C+SCGQ S  CPGH GHI+LV P+Y            Q++CF CH+F+   + V+  
Sbjct: 61   KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 387  TSQLELIIKGDVVGAKNIAAQL----------SESLPCGENETINMKDVTCHSETKHLER 536
            TSQLELI+KGD++ AK + + +           ES+  G+ +     +  C+S  +  E 
Sbjct: 121  TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDGD-----ESQCYSAEQLGE- 174

Query: 537  SSWTSIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLH 713
             +WTS+Q  EAMS+L   L          GAK+P  + PTFGW +MN +S   TRA+ + 
Sbjct: 175  -NWTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIR 233

Query: 714  GSKLKQSFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKK 893
              + + +         S GG +TT          D +D+ S+G           K  K+K
Sbjct: 234  SVESETT-----NDDISLGGGDTT----------DVEDITSAGTA---------KRDKRK 269

Query: 894  GHSLPTEFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHS 1073
               L  +  +Q K  SG LLP++    +++LWENE RLCS I+DIQ  G     K+  HS
Sbjct: 270  KEKLSYKLAEQNKL-SGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHS 325

Query: 1074 MFFIEALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRW 1253
            MFF+E + VPPIKFRPP+KGG +VMEHPQT LL++VLQCN+SLG+AHLN S  S+V+ RW
Sbjct: 326  MFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRW 385

Query: 1254 MELQQSVNVLFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPY 1433
            M+LQQSVN+LF NK   G+RD A TGICQLLEKKEGIFRQK+MGKRVN+ACRSVISPDPY
Sbjct: 386  MDLQQSVNMLFDNKTASGKRDVA-TGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPY 444

Query: 1434 LAVNEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSR 1613
            LAVNEIGIPPYFALRL+YPERVTPWN  KLRNAI+NGPE HPGATHY DK + +KL    
Sbjct: 445  LAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKG 504

Query: 1614 KSRNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHV 1793
            K  +  SRKLP+SRGV++  GK  +HE EGKVVYRHL+DGDVVLVNRQPTLHKPSIMAH+
Sbjct: 505  KLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHI 564

Query: 1794 VRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGD 1973
            VRVLKGEKT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ PTSGD
Sbjct: 565  VRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGD 624

Query: 1974 TKRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSED 2153
              R LIQDHIVSA LLTK+DTFL+++E+N LLYS+GVS+   G+  GK GQKV   NSE 
Sbjct: 625  PIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSES 684

Query: 2154 EMQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQSGEG-- 2327
            EM    PAIWKP PLWTGKQVI++LL ++TR  G  PFT +K + I   +F +Q  +G  
Sbjct: 685  EMFLFPPAIWKPEPLWTGKQVISALLYYITR--GSPPFTAEKNAKIPSNFFKTQIRKGKR 742

Query: 2328 ---------------KLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALS 2462
                           KL I+KN  V GV+DK+QFG YG++HTVQELYGS+ AG LLSALS
Sbjct: 743  YTEDTSKKKDKPDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALS 802

Query: 2463 RLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYKDGD-IDEMT 2633
            RLFT FLQMHGFTCGVDDL++ +  D+ER         +G+ VH EF+G K+ D ID +T
Sbjct: 803  RLFTTFLQMHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVT 862

Query: 2634 LQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFL 2813
            LQ+ +EK +R NGE+A     KM S+ N++ ++ +  KL        G+LKP  +NC  L
Sbjct: 863  LQLNIEKKIRSNGEAALTLDRKMTSNLNSRTSSGILKKLLSE-----GILKPSGKNCISL 917

Query: 2814 MTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYL 2993
            MT SGAKGS VNFQQISS LGQQELEGKRVPRM+SGKTLPCFPPWD S RAGGFI DR+L
Sbjct: 918  MTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFL 977

Query: 2994 TGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQ 3173
            T L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++Q
Sbjct: 978  TALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQ 1037

Query: 3174 FFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKST 3353
            F YGEDGVDVH+TSF+++F  L+ N+++V      Q ++     S+ YI +LPEALE   
Sbjct: 1038 FHYGEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDR-----SSPYINKLPEALEGKA 1092

Query: 3354 KDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLN 3533
            + F  + ++       S +                A+PGEPVGV+A+QS+GEP+TQMTLN
Sbjct: 1093 EKFSKQRNLG------SMEQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLN 1146

Query: 3534 TFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVS 3713
            TFH AG+ GE+NVTLGIPRLQEILM A+ +I+TP MTCPL   K+  DA  LA KL K++
Sbjct: 1147 TFHLAGR-GEMNVTLGIPRLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKIT 1205

Query: 3714 VADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVDE 3893
            VAD+++SM+V VVP +V   Q C++YKL MKLY  + YP ++DI+L+D E+TL + FV E
Sbjct: 1206 VADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRE 1265

Query: 3894 LEKAIRAHLLMLSKIGGIKNI---VQRSESDEGEET-DNDDPGSKHKQXXXXXXXXXXXX 4061
            LE AI+ H+ +LSKI GIK      Q + S+  E+   N     K  Q            
Sbjct: 1266 LEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGV 1325

Query: 4062 XXXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDAEV 4241
                    LG DAQKRK Q                 + E  +GE S   E + D  D + 
Sbjct: 1326 EDTEGYEDLGSDAQKRKLQ------GTDEVDYEDGPEEETHDGELSEEIEGDEDGSDVDA 1379

Query: 4242 -DNYIDGEVQIFDAEDESRQRSVSNPKS-TEKKHKSEVKRKPTRAAKSGDRSVFVEAKGL 4415
             +NY +    + DA +       S  K+  EK++    K+K     K  DR++FVEAKG 
Sbjct: 1380 NENYNN----VTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKYDRAIFVEAKGK 1435

Query: 4416 DFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI------------------- 4538
             FE+H RFT EP+ILL++IAQ+ AK V I+  G + +C  I                   
Sbjct: 1436 HFEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIE 1495

Query: 4539 ----EKDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVR 4706
                EK++   LQT+GV+F+ FW++++DLD+ +I SN++HA+   YGVEAAR T+I++V+
Sbjct: 1496 ISASEKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQ 1555

Query: 4707 AVFEDHGISVNIRHLSLIADFMTQQGRYRPMSRHG-MAVSTSPFSKMSYETAADFIIEAA 4883
             VF+ +GISVNIRHL+LIADFMT  G YRPM+R G +A STSPF KM +ETA +FI+EAA
Sbjct: 1556 NVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAA 1615

Query: 4884 YHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            YHG+VD LE+PSARICLGLPVKMGTG  DL+QK++
Sbjct: 1616 YHGQVDNLETPSARICLGLPVKMGTGCHDLIQKLE 1650


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score = 1684 bits (4361), Expect = 0.0
 Identities = 946/1726 (54%), Positives = 1165/1726 (67%), Gaps = 72/1726 (4%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            MA TTEG++E V+ V F  +T+EEVRK S VK+T P L D +  P  GGLYDPA+G LDE
Sbjct: 1    MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             T C+SCGQR F CPGHCGHIDLV P+Y            + +CF CH+F+    +VE C
Sbjct: 61   TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120

Query: 387  TSQLELIIKGDVVGAKNIAAQLSESLPCGENETINMKDVTCHS------ETKHLERSSWT 548
             + LELI+ G++  AK +           E E +N K  T  S      E K+ +  +WT
Sbjct: 121  KTLLELILDGEIAKAKEL-----------EEEWMNSKSRTKSSHSMYTYERKNGQPETWT 169

Query: 549  SIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKL 725
            S+Q  EA+S++  FL          GAKSP  T PTFGW +M  ++    RAN +  SK 
Sbjct: 170  SLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKP 229

Query: 726  KQSFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSL 905
                +  G +  S+   ETT +      + D +DV                         
Sbjct: 230  VS--VSSGAEGVSSLEEETTTE----ATVEDFEDVSP----------------------- 260

Query: 906  PTEFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFI 1085
              E   Q  F SG LLP+E    +K LW+NE  LCS ISDI Q G      +  HSMFF+
Sbjct: 261  --EVFMQKNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFL 315

Query: 1086 EALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQ 1265
            E++LVPPIKFRPP+KGG SVMEHPQT LL++VLQ N+SLGN H N S+ S++V  WM+LQ
Sbjct: 316  ESVLVPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQ 375

Query: 1266 QSVNVLFGNKKNIGQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAV 1442
            QS+N+LF +K   G  +++A  GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAV
Sbjct: 376  QSINILFDSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAV 435

Query: 1443 NEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKL--AQSRK 1616
            NEIGIPPYFALRLTYPERVT WN  KLRNAIINGPE HPGATHYIDK A +KL    SRK
Sbjct: 436  NEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRK 495

Query: 1617 SRNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVV 1796
            SR SISRKLPSSRGVV+  G   ++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVV
Sbjct: 496  SRISISRKLPSSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVV 554

Query: 1797 RVLKGEKTIRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGD 1973
            RVLKGEKTIRMHYANCS TYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY+ PTSG+
Sbjct: 555  RVLKGEKTIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGE 614

Query: 1974 TKRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSED 2153
              R LIQDHI+SAVLLTK+DTFL +DE++ LLYS+G+S     A   K GQK+ +++ + 
Sbjct: 615  PIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDA 674

Query: 2154 EMQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYF-----GSQS 2318
            EM  VLPA+WKP PLWTGKQV+T+LL+H+T+  G  PF V+K   I + +F     G+ S
Sbjct: 675  EMLPVLPAVWKPEPLWTGKQVVTALLDHITQ--GSPPFFVEKDVKIPRGFFKCRDMGNNS 732

Query: 2319 GEGK-----------------LFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVL 2447
             + K                 L I KN  V GVIDK+QFG YGLVHTVQELYGS+TAG+L
Sbjct: 733  SKKKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLL 792

Query: 2448 LSALSRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYKDGD- 2618
            LS +SRLFTVFLQ HGFTCGVDDLL+++ +D ER+K      ++GEQVH  FL  KDG+ 
Sbjct: 793  LSVMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEK 852

Query: 2619 IDEMTLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPR 2798
            +D MTLQ+ +EK +  NGE+A   LD+ M+S+  + T   N K+     S  GLLKP  +
Sbjct: 853  LDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNERTG--NSKVLKDLLSE-GLLKPSVK 909

Query: 2799 NCFFLMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFI 2978
            NC  LMT SGAKG   NFQQISS LGQQ+LEGKRVPRM+SGKTLPCFPPWD +SRAGGFI
Sbjct: 910  NCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFI 969

Query: 2979 SDRYLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDAD 3158
             DR+LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDAD
Sbjct: 970  VDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDAD 1029

Query: 3159 GSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEA 3338
            GSV+QF YGEDGVDVHKT+F++KF+ LA NQ ++ E    Q   GK+   N +I ELP A
Sbjct: 1030 GSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQL--GKY---NVFINELPSA 1084

Query: 3339 LEKSTKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPST 3518
            L +  +   N LS K     L  K +              A+PGEPVGV+AAQSIGEPST
Sbjct: 1085 LREKGEFIYNSLS-KDKVPGLVLK-EDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPST 1142

Query: 3519 QMTLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAK 3698
            QMTLNTFHH G+ GE+NVTLGI RLQEILM AS++I+TP+MTCPL +G + D A  LA K
Sbjct: 1143 QMTLNTFHHVGR-GEMNVTLGILRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANK 1201

Query: 3699 LMKVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTI 3878
            L K++VAD++ESM V VVPFS  K + C++YKL++  Y  E   +   IS ED E TL  
Sbjct: 1202 LKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLET 1261

Query: 3879 LFVDELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXX 4058
            +F++ELE  I   +++LSKI GIKN V  S+S +G    ++   S+ K+           
Sbjct: 1262 VFLEELEGLIEREMVLLSKINGIKNFVPDSQS-KGSSEGDEVSSSRQKE----NDDDDDE 1316

Query: 4059 XXXXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVD-A 4235
                     LG D +K+K Q               S D  N + E S G ESEVDQ D A
Sbjct: 1317 GNDLDVAEDLGSDMKKQKLQANDEMDYEDD-----SEDDLNAK-ESSTGFESEVDQGDEA 1370

Query: 4236 EVDNYIDGEVQIFDAEDESR------QRSVSNPKSTE-----KKHKSEVKRKPTRAAKSG 4382
            E+ N    E+ + D+  E++       +S+S  K+TE     KK KSE+ RK T      
Sbjct: 1371 EITNNDMIEI-VKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKET------ 1423

Query: 4383 DRSVFVEAKGLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI-------- 4538
            DRS+FVEAK   FEVH +FT+EP+ LLS+I Q+AA+ V I+R+G I QC  I        
Sbjct: 1424 DRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVI 1483

Query: 4539 ---------------EKDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVE 4673
                           EK+K   LQT+GV+F+  W+MQ++LD+ +I SNDIHA+ QTYGVE
Sbjct: 1484 YHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVE 1543

Query: 4674 AARATLIKQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSR-HGMAVSTSPFSKMSY 4850
            AARAT+I++++ +F  +GISVNIRHLSL+AD+MT  G YRPMSR  G++ S SPFS+M++
Sbjct: 1544 AARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTF 1603

Query: 4851 ETAADFIIEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            ETA  FI++AA HGEVD LE+PS+RICLGLPVKMGTGSFDLMQK++
Sbjct: 1604 ETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIE 1649


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 1679 bits (4347), Expect = 0.0
 Identities = 947/1740 (54%), Positives = 1163/1740 (66%), Gaps = 80/1740 (4%)
 Frame = +3

Query: 9    LQTLPRMAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPA 188
            ++ L R      G++E V+ V F  +T+EEVRK S VK+T P L D +  P  GGLYDPA
Sbjct: 1    MRALSRTLLFPMGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPA 60

Query: 189  LGPLDEATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEV 368
            +G LDE T C+SCGQR F CPGHCGHIDLV P+Y            + +CF CH+F+   
Sbjct: 61   MGSLDETTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGE 120

Query: 369  ELVEQCTSQLELIIKGDVVGAKNIAAQLSESLPCGENETINMKDVTCHS------ETKHL 530
             +VE C + LELI+ G++  AK +           E E +N K  T  S      E K+ 
Sbjct: 121  SMVENCKTLLELILDGEIAKAKEL-----------EEEWMNSKSRTKSSHSMYTYERKNG 169

Query: 531  ERSSWTSIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANV 707
            +  +WTS+Q  EA+S++  FL          GAKSP  T PTFGW +M  ++    RAN 
Sbjct: 170  QPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANA 229

Query: 708  LHGSKLKQSFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHK 887
            +  SK     +  G +  S+   ETT +      + D +DV                   
Sbjct: 230  IRRSKPVS--VSSGAEGVSSLEEETTTE----ATVEDFEDVSP----------------- 266

Query: 888  KKGHSLPTEFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGN 1067
                    E   Q  F SG LLP+E    +K LW+NE  LCS ISDI Q G      +  
Sbjct: 267  --------EVFMQKNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAG 315

Query: 1068 HSMFFIEALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVP 1247
            HSMFF+E++LVPPIKFRPP+KGG SVMEHPQT LL++VLQ N+SLGN H N S+ S++V 
Sbjct: 316  HSMFFLESVLVPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVR 375

Query: 1248 RWMELQQSVNVLFGNKKNIGQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISP 1424
             WM+LQQS+N+LF +K   G  +++A  GICQLLEKKEG+FRQK+MGKRVN+ACRSVISP
Sbjct: 376  LWMDLQQSINILFDSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISP 435

Query: 1425 DPYLAVNEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKL- 1601
            DPYLAVNEIGIPPYFALRLTYPERVT WN  KLRNAIINGPE HPGATHYIDK A +KL 
Sbjct: 436  DPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLN 495

Query: 1602 -AQSRKSRNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPS 1778
               SRKSR SISRKLPSSRGVV+  G   ++E EGK+V RHLQDGD+VLVNRQPTLHKPS
Sbjct: 496  LKPSRKSRISISRKLPSSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPS 554

Query: 1779 IMAHVVRVLKGEKTIRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYI 1955
            IMAHVVRVLKGEKTIRMHYANCS TYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY+
Sbjct: 555  IMAHVVRVLKGEKTIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYV 614

Query: 1956 IPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVC 2135
             PTSG+  R LIQDHI+SAVLLTK+DTFL +DE++ LLYS+G+S     A   K GQK+ 
Sbjct: 615  KPTSGEPIRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIF 674

Query: 2136 SINSEDEMQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQ 2315
            +++ + EM  VLPA+WKP PLWTGKQV+T+LL+H+T+  G  PF V+K   I + +    
Sbjct: 675  TLDFDAEMLPVLPAVWKPEPLWTGKQVVTALLDHITQ--GSPPFFVEKDVKIPRGFLILD 732

Query: 2316 SGEGK-------------------LFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTA 2438
             G  K                   L I KN  V GVIDK+QFG YGLVHTVQELYGS+TA
Sbjct: 733  EGNSKKKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTA 792

Query: 2439 GVLLSALSRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYKD 2612
            G+LLS +SRLFTVFLQ HGFTCGVDDLL+++ +D ER+K      ++GEQVH  FL  KD
Sbjct: 793  GLLLSVMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKD 852

Query: 2613 GD-IDEMTLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKP 2789
            G+ +D MTLQ+ +EK +  NGE+A   LD+ M+S+  + T   N K+     S  GLLKP
Sbjct: 853  GEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNERTG--NSKVLKDLLSE-GLLKP 909

Query: 2790 FPRNCFFLMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAG 2969
              +NC  LMT SGAKG   NFQQISS LGQQ+LEGKRVPRM+SGKTLPCFPPWD +SRAG
Sbjct: 910  SVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAG 969

Query: 2970 GFISDRYLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVR 3149
            GFI DR+LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVR
Sbjct: 970  GFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVR 1029

Query: 3150 DADGSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKEL 3329
            DADGSV+QF YGEDGVDVHKT+F++KF+ LA NQ ++ E    Q   GK+   N +I EL
Sbjct: 1030 DADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQL--GKY---NVFINEL 1084

Query: 3330 PEALEKSTKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGE 3509
            P AL +  +   N LS K     L  K +              A+PGEPVGV+AAQSIGE
Sbjct: 1085 PSALREKGEFIYNSLS-KDKVPGLVLK-EDFIRLLENKYLSSLAQPGEPVGVLAAQSIGE 1142

Query: 3510 PSTQMTLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRL 3689
            PSTQMTLNTFHHAG+ GE+NVTLGIPRLQEILM AS++I+TP+MTCPL +G + D A  L
Sbjct: 1143 PSTQMTLNTFHHAGR-GEMNVTLGIPRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGL 1201

Query: 3690 AAKLMKVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKT 3869
            A KL K++VAD++ESM V VVPFS  K + C++YKL++  Y  E   +   IS ED E T
Sbjct: 1202 ANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENT 1261

Query: 3870 LTILFVDELEKAIRAHLLMLSKIGGIKNIVQRSE---SDEG--------EETDNDDPGSK 4016
            L  +F++ELE  I   +++LSKI GIK  V  S+   S EG        EE D+DD G+ 
Sbjct: 1262 LETVFLEELEGLIEREMVLLSKINGIKXFVPDSQSKGSSEGDEVSSSRQEEMDDDDEGN- 1320

Query: 4017 HKQXXXXXXXXXXXXXXXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEP 4196
                                   LG D +K+K Q               S D  N + E 
Sbjct: 1321 ----------------DLDVAEDLGSDXEKQKLQANDEMDYEDD-----SEDDLNAK-ES 1358

Query: 4197 SAGSESEVDQVD-AEVDNYIDGEVQIFDAEDESR------QRSVSNPKSTE-----KKHK 4340
            S G ESEVDQ D AE+ N    E+ + D+  E++       +S+S  K+TE     KK K
Sbjct: 1359 STGFESEVDQGDEAEITNNDMIEI-VKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVK 1417

Query: 4341 SEVKRKPTRAAKSGDRSVFVEAKGLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNI 4520
            SE+ RK T      DRS+FVEAK   FEVH +FT+EP+ LLS+I Q+AA+ V I+R+G I
Sbjct: 1418 SELVRKET------DRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKI 1471

Query: 4521 NQCSVI-----------------------EKDKEYQLQTAGVNFQAFWKMQEDLDINHIS 4631
             QC  I                       EK+K   LQT+GV+F+  W+MQ++LD+ +I 
Sbjct: 1472 IQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIY 1531

Query: 4632 SNDIHAVFQTYGVEAARATLIKQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSR-H 4808
            SNDIHA+ QTYGVEAARAT+I++++ +F  +GISVNIRHLSL+AD+MT  G YRPMSR  
Sbjct: 1532 SNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLG 1591

Query: 4809 GMAVSTSPFSKMSYETAADFIIEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            G++ S SPFS+M++ETA  FI++AA HGEVD LE+PS+RICLGLPVKMGTGSFDLMQK++
Sbjct: 1592 GISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIE 1651


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 1667 bits (4317), Expect = 0.0
 Identities = 900/1720 (52%), Positives = 1150/1720 (66%), Gaps = 72/1720 (4%)
 Frame = +3

Query: 42   EGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDEATPCR 221
            +G++E VEAV F  +TDEEVR+HS VK+T+P L D L  P P GLYDPA+GPLD  + C+
Sbjct: 3    QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 222  SCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQCTSQLE 401
             C Q +  C GHCGHI+LV P+Y            Q++CF+C +F+     VE+C S+LE
Sbjct: 63   FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 402  LIIKGDVVGAKNIAAQLSESLPC-----GENETINMKDVTCHSETKHLERSSWTSIQHGE 566
            LI KGDVVGAK I A   ++        G + +  M D+      ++ +R SW + Q  E
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNFQFTE 180

Query: 567  AMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMNMSNKNTRANVLH-GSKLKQSFLG 743
            AM+++D  L           AK+P    P+FG  +M++SNK  R N ++ G +      G
Sbjct: 181  AMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTG 240

Query: 744  EGEQKFSAGGVETTHDLFASGN---IVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPTE 914
              E+  S   V  T  L  +     +  +D VE+S            K  K++G      
Sbjct: 241  GSEENPSPEVVNATEPLGEAETSLCVTSTDGVENS------------KARKRQGGDQSDV 288

Query: 915  FLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEAL 1094
              +Q   FS   LP++    I+ LWENE  LC+   DIQ      S K    SMFF++++
Sbjct: 289  VEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSI 348

Query: 1095 LVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQSV 1274
            LVPPIKFRPP+KGG S+MEHP T LL +V+Q N++LGNAH+N + RS+++ R M+LQQSV
Sbjct: 349  LVPPIKFRPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSV 408

Query: 1275 NVLFGNK--KNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNE 1448
            NVLF +K     GQ+D  G+GICQ+LEKKEGIFRQK+MGKRVN+ACRSVISPDPYL+VNE
Sbjct: 409  NVLFDSKTASGPGQKD-VGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNE 467

Query: 1449 IGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNS 1628
            IGIPPYFALRLTYPER+TPWNA K+R+A+INGPE HPGA  + D+ A +KL  ++K R +
Sbjct: 468  IGIPPYFALRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVA 527

Query: 1629 ISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLK 1808
            ISRKLPSSRG V Q G++ E+E EGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLK
Sbjct: 528  ISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLK 587

Query: 1809 GEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGL 1988
            GEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNAN QYI+PT GDT RGL
Sbjct: 588  GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGL 647

Query: 1989 IQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHV 2168
            IQDHIV AV+LT ++TFLT  E+N LLY +GV         G    KV  ++ E  +Q V
Sbjct: 648  IQDHIVGAVILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTV 707

Query: 2169 LPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQS---------- 2318
            LPA+WKP PLWTGKQVIT+LLNH+T  KG  P TVK    I   YF S+S          
Sbjct: 708  LPAVWKPKPLWTGKQVITALLNHLT--KGCAPCTVKNKGKIPYPYFLSESRLVEYQSREE 765

Query: 2319 -----GEGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVFL 2483
                  E +  I KN  V GVIDK+QFGK+GLVHT+QELYGS+ AG+LLSALSRLFT+FL
Sbjct: 766  QEDRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFL 825

Query: 2484 QMHGFTCGVDDLLIVKSLDLERKKIFD-RRVGEQVHAEFLGYKDGDIDEMTLQVEMEKVM 2660
            Q+HGFTCGVDDL+I+   D+ RK+  +   VGE+ H +F+ +K G+I  + LQ+E+EK M
Sbjct: 826  QLHGFTCGVDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAM 885

Query: 2661 RVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFLMTASGAKGS 2840
              N E+ATA LD  M ++ A   ++ N +L        GLLKPFPRNC  LMT +GAKGS
Sbjct: 886  SSNKEAATAALDMKMKNKLANKGSQFNKELLLK-----GLLKPFPRNCIALMTITGAKGS 940

Query: 2841 QVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRPQEYY 3020
             VNFQQISS LGQQELEGKRVPRM+SGKTLPCFPPWD +SRAGG++SDR+L+GLRPQEYY
Sbjct: 941  TVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYY 1000

Query: 3021 FHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGEDGVD 3200
            FHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF+YGEDGVD
Sbjct: 1001 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVD 1060

Query: 3201 VHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKSTKDFINKLSV 3380
            VH+TSFL  FK L  NQ+ + ++L      G+ +NS  YI++LP+ LE+  K F  K + 
Sbjct: 1061 VHRTSFLKNFKALKNNQETICQKL----RHGRKLNS--YIEKLPDGLEEKVKHFWEKRTK 1114

Query: 3381 KHHS------------SRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQM 3524
            K                +L  +                A+ GEPVGV+A QS+GEPSTQM
Sbjct: 1115 KLEKKLGKLVKKEEMVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQM 1174

Query: 3525 TLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLM 3704
            TLNTFH AG+ GE+NVTLGIPRLQEILM ASE I+TP++TCP    ++++DA  L AK+ 
Sbjct: 1175 TLNTFHLAGR-GEMNVTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVK 1233

Query: 3705 KVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILF 3884
            K++VAD++ESMEV ++P S++ +Q   LYKL +KL   +       +S EDCE TL  +F
Sbjct: 1234 KITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVF 1287

Query: 3885 VDELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXX 4064
            + ELE AI +HL +LSKI GI+N    SES + +ET+ +   ++H++             
Sbjct: 1288 LRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRHEE------EMLDDED 1341

Query: 4065 XXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDAEVD 4244
                   L  DAQKRKQQ                 D    E E +A  E E  +   E+D
Sbjct: 1342 EDERTEDLSSDAQKRKQQT--------TDEMDYDDDENEDEAETTAEIEDEKSEQTDEID 1393

Query: 4245 NYIDGEVQIFDAED-----ESRQRSVSNPKSTEKKHKSEV-----KRKPTRAAKSGDRSV 4394
            N  + E+     E+     +S +  +SN KS++ K K++      K+K  R+ K  DR V
Sbjct: 1394 NGDEEEIGNRGNEEQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDRCV 1453

Query: 4395 FVEAKGLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVIEKD--------K 4550
            FV+ +GL FEVH RF +EP+ILL+++AQK AK VYIK +G I+QC +++ +         
Sbjct: 1454 FVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWD 1513

Query: 4551 EYQ--------------LQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARAT 4688
            EYQ              L+ AGV+F  FW+MQ+DLD+  I +N+I A+  TYGVEAARA+
Sbjct: 1514 EYQTKQQSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARAS 1573

Query: 4689 LIKQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSRHG-MAVSTSPFSKMSYETAAD 4865
            ++++V+ VF  +G+ ++ RHLSLIADFMT  G Y+PMSRHG ++ S SPF KMS+ETA+ 
Sbjct: 1574 ILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASK 1633

Query: 4866 FIIEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKV 4985
            FI+EAA HG  D LE+PS+RICLGLPVKMGTG FD+MQK+
Sbjct: 1634 FIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKL 1673


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score = 1654 bits (4283), Expect = 0.0
 Identities = 911/1705 (53%), Positives = 1150/1705 (67%), Gaps = 55/1705 (3%)
 Frame = +3

Query: 39   TEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDEATPC 218
            TEG T  V+AV F  LT +E+ + S VKITNP L + L  P  GGLYDPALGPLD+ + C
Sbjct: 5    TEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDDKSLC 64

Query: 219  RSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQCTSQL 398
            +SCGQ S  CPGH GHI+LV P+Y            Q++CF CH+F    + VE  TSQ 
Sbjct: 65   KSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMRTSQF 124

Query: 399  ELIIKGDVVGAKNIAAQLS-ESLPCGENETINMKDVTCHSETKHLER--SSWTSIQHGEA 569
            ELI+KGD++ AK++ + +S ES   G+ +           E++ +E+   +W+S+Q  EA
Sbjct: 125  ELIMKGDIIRAKSLDSIISDESNHSGDGD-----------ESQGVEQLGENWSSLQFSEA 173

Query: 570  MSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKLKQSFLGE 746
            MS+L  FL          G  +P  + PTFGW +MN +S+   RAN +    L+   + +
Sbjct: 174  MSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRA--LESETIND 231

Query: 747  GEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPTEFLKQ 926
                 S GG ETT +          +D+ S+G           K  K+K   L ++   Q
Sbjct: 232  D---MSLGGGETTEE----------EDITSTGTA---------KRDKRKKGKLSSKLAAQ 269

Query: 927  MKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEALLVPP 1106
             K  SG LLP++    +++LWENE RLCS ISDIQ  G     K+  HSMFF+E + VPP
Sbjct: 270  NKL-SGSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFVPP 325

Query: 1107 IKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQSVNVLF 1286
            IKFRPP+KGG  VMEHPQT LL++VLQ N+SLG+AH+N    S+V+ RWM+LQQSVN+LF
Sbjct: 326  IKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQQSVNLLF 385

Query: 1287 GNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPY 1466
             NK + GQ + A  GICQLLEKKEGIFRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPY
Sbjct: 386  DNKTS-GQGEVAA-GICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPY 443

Query: 1467 FALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSISRKLP 1646
            FALRL+YPERVTPWN T LRNAI+NGP+ HPGATHY D+ A +KL  + K  + ISRKLP
Sbjct: 444  FALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRKLP 503

Query: 1647 SSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIR 1826
            SSRGV++  GK  + E EGK+VYRHL+DGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT+R
Sbjct: 504  SSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVR 563

Query: 1827 MHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLIQDHIV 2006
            MHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ PTSGD  R LIQDHIV
Sbjct: 564  MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 623

Query: 2007 SAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHVLPAIWK 2186
            SA LLTK+DTF+T++ +  LLYS+GVS+   G+  GK GQKV   NSE EM    PAIWK
Sbjct: 624  SAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAIWK 683

Query: 2187 PVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQSGEG------------- 2327
            P PLWTGKQVI++LL ++TR     PFTV+K + I   +F +Q  +G             
Sbjct: 684  PEPLWTGKQVISALLYYITR--DSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNKVE 741

Query: 2328 -----KLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVFLQMH 2492
                 KL I+KN  V GV+DK+QFG YG++HTVQELYGS  AG LLSALSRLFT FLQMH
Sbjct: 742  PDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQMH 801

Query: 2493 GFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYKDGD-IDEMTLQVEMEKVMR 2663
            GFTCGVDDL+I +  D+ER         +G+ VH EF+G  + D ID +TLQ+ +EK +R
Sbjct: 802  GFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKKIR 861

Query: 2664 VNGESATARLD-KMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFLMTASGAKGS 2840
             NGE+A   LD KM S+ N++ ++ +   L        G+LKP  +NC  LMT SGAKGS
Sbjct: 862  SNGEAALTYLDRKMTSNLNSRTSSGILKDLLSD-----GILKPSGKNCISLMTTSGAKGS 916

Query: 2841 QVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRPQEYY 3020
             VNFQQISS LGQQELEGKRVPRM+SGKTLPCF PWD S RAGGFI DR+LTGL PQEYY
Sbjct: 917  MVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYY 976

Query: 3021 FHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGEDGVD 3200
            FHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVD
Sbjct: 977  FHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVD 1036

Query: 3201 VHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKSTKDFINKLSV 3380
            VH TSF++KF+ L+ N+++V      Q ++     S+ YI +LP+AL++  ++F      
Sbjct: 1037 VHHTSFINKFEALSTNKELVYGNCCRQLDR-----SSPYINKLPDALKEKAENFFRDSLK 1091

Query: 3381 KHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLNTFHHAGQGG 3560
            + +   L R                 A+PGE VGV+A+QS+GEP+TQMTLNTFH AG+ G
Sbjct: 1092 QRNLGSLKRAE--FLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGR-G 1148

Query: 3561 EVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVSVADLVESME 3740
            E+NVTLGIPRLQEI+M A+ +I+TP MTCPL   K+ ++A  LA KL K++VAD+++SM+
Sbjct: 1149 EMNVTLGIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMK 1208

Query: 3741 VCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVDELEKAIRAHL 3920
            V VVP SV   Q C++YKL MKLY P+ YP++SDI+LED E TL I FV ELE AI  H+
Sbjct: 1209 VSVVPVSVLGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHM 1268

Query: 3921 LMLSKIGGIKNIV--QRSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXXXXXXXXXLGV 4094
             +LSKI GIK      +S S+  E+   +   S+ K                     LG 
Sbjct: 1269 ALLSKISGIKKFKTDPQSHSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDTEGYEDLGS 1328

Query: 4095 DAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEV--DQVDAEVDNYIDGEVQ 4268
            DAQKRK+Q                TD  + E  P   +   V  ++++ + DN  D    
Sbjct: 1329 DAQKRKRQ---------------GTDEVDYEDGPEEETHDGVLSEEIENDEDNVDDN--M 1371

Query: 4269 IFDAEDESRQRSVSNPKST-EKKHKSEVKRKPTRAAKSGDRSVFVEAKGLDFEVHLRFTD 4445
              DA D      +S  KS  EK      K+K     +  DR+VFV+AKG+ F++H +FT 
Sbjct: 1372 TLDASDSEGLDELSESKSIFEKDSLKREKKKSRPTTRKYDRAVFVKAKGMHFQIHFKFTG 1431

Query: 4446 EPYILLSEIAQKAAKNVYIKRAGNINQCSVIE-----------------------KDKEY 4556
            EP ILL+EIA ++AK V I+ +G + +C  +                        K+K  
Sbjct: 1432 EPDILLAEIALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDIPASVKEKIP 1491

Query: 4557 QLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVFEDHGISV 4736
             LQT+GV+F+ FW++Q+DLD+ +I SN++HA+   YGVEAAR T+I++V+ VF+ +GISV
Sbjct: 1492 ALQTSGVHFKTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISV 1551

Query: 4737 NIRHLSLIADFMTQQGRYRPMSRHG-MAVSTSPFSKMSYETAADFIIEAAYHGEVDYLES 4913
            NIRHL+LIADFMT  G YRPM+R+G +A  TSPF KM +ETA+ FI+EAAYHG+VD LE+
Sbjct: 1552 NIRHLTLIADFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLET 1611

Query: 4914 PSARICLGLPVKMGTGSFDLMQKVQ 4988
            PS+RICLGLPVKMGTG  DL+QK++
Sbjct: 1612 PSSRICLGLPVKMGTGCHDLIQKLE 1636


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score = 1649 bits (4270), Expect = 0.0
 Identities = 890/1718 (51%), Positives = 1140/1718 (66%), Gaps = 70/1718 (4%)
 Frame = +3

Query: 42   EGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDEATPCR 221
            +G++E VEAV F  +TDEEVR+HS VK+T+P L D L  P P GLYDPA+GPLD  + C+
Sbjct: 3    QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 222  SCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQCTSQLE 401
             C Q +  C GHCGHI+LV P+Y            Q++CF+C +F+     VE+C S+LE
Sbjct: 63   FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 402  LIIKGDVVGAKNIAAQLSESLPC-----GENETINMKDVTCHSETKHLERSSWTSIQHGE 566
            LI KGDVVGAK I A   ++        G + +  M D+      ++ +R SW + Q  E
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCTMDDLNVRDHCEYNKRPSWDNFQFTE 180

Query: 567  AMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMNMSNKNTRANVLH-GSKLKQSFLG 743
            AM+++D  L           AK+P    P+FG  +M++SNK  R N ++ G +      G
Sbjct: 181  AMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTG 240

Query: 744  EGEQKFSAGGVETTHDLFASGN---IVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPTE 914
              E+  S   V  T  L  +     +  +D VE+S            K  K++G      
Sbjct: 241  GSEENPSPEVVNATEPLGEAETSLCVTSTDGVENS------------KGRKRQGGDQSDV 288

Query: 915  FLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEAL 1094
              +Q   FS   LP++    I+ LWENE  LC+   DIQ      S K    SMFF++++
Sbjct: 289  VEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSI 348

Query: 1095 LVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQSV 1274
            LVPP+KFRPP+KGG S+MEHP T LL +V+Q N++LGNAH+N + RS+++ R M+LQQSV
Sbjct: 349  LVPPVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISRLMDLQQSV 408

Query: 1275 NVLFGNK--KNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNE 1448
            NVLF +K     GQ+D  G+GICQ+LEKKEGIFRQK+MGKRVN+ACRSVISPDPYL+VNE
Sbjct: 409  NVLFDSKTASGPGQKD-VGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNE 467

Query: 1449 IGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNS 1628
            IGIPPYFA RLTYPER+TPWNA K+R+A+INGPE HPGA  + D+ A +KL  ++K R +
Sbjct: 468  IGIPPYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNKKMRVA 527

Query: 1629 ISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLK 1808
            ISRKLPSSRG V Q G++ E+E EGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLK
Sbjct: 528  ISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLK 587

Query: 1809 GEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGL 1988
            GEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNAN QYI+PT GDT RGL
Sbjct: 588  GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGL 647

Query: 1989 IQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHV 2168
            IQDHIV AV+LT ++TFL+  E+N LLY +GV         G    KV  ++ E  +Q V
Sbjct: 648  IQDHIVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEGVVQTV 707

Query: 2169 LPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQS---------- 2318
            LPA+WKP PLWTGKQVIT+LLNH+T   G  P TVK    I   YF S+S          
Sbjct: 708  LPAVWKPKPLWTGKQVITALLNHLT--NGCPPCTVKNKGKIPYAYFLSESRLVEYQSREE 765

Query: 2319 -----GEGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVFL 2483
                  E +  I KN  V GVIDK+QFGK+GLVHT+QELYGS+ AG+LLSALSRLFT+FL
Sbjct: 766  QEDRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFL 825

Query: 2484 QMHGFTCGVDDLLIVKSLDLERKKIFD-RRVGEQVHAEFLGYKDGDIDEMTLQVEMEKVM 2660
            Q+HGFTCG+DDL+I+   D+ RK+  +   VGE+ H +F+ +K G+I  + LQ+E+EK +
Sbjct: 826  QLHGFTCGIDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAI 885

Query: 2661 RVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFLMTASGAKGS 2840
              N E ATA LD  M ++ A   ++ N +L        GLLKPFPRNC  LMT +GAKGS
Sbjct: 886  SSNKEVATAALDMKMKNKLANKGSQFNKELLLK-----GLLKPFPRNCIALMTITGAKGS 940

Query: 2841 QVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRPQEYY 3020
             VNFQQISS LGQQELEGKRVPRM+SGKTLPCFP WD +SRAGG++SDR+L+GLRPQEYY
Sbjct: 941  TVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQEYY 1000

Query: 3021 FHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGEDGVD 3200
            FHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF+YGEDGVD
Sbjct: 1001 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVD 1060

Query: 3201 VHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEAL--------EKSTK 3356
            VH+TSFL  FK L  NQ+ + ++L   C+       N YI++LP+ L        E  TK
Sbjct: 1061 VHRTSFLKNFKALKNNQETICQKLRHGCK------LNSYIEKLPDGLGEKVKHFWESKTK 1114

Query: 3357 DFINKLSV----KHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQM 3524
                KL +    +    +L  +                A+ GEPVGV+A QS+GEPSTQM
Sbjct: 1115 KLEKKLGMLVKKEEMVKQLKEEEADFLELVGQKYFSSLADSGEPVGVLAGQSVGEPSTQM 1174

Query: 3525 TLNTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLM 3704
            TLNTFH AG+ GE+NVTLGIPRLQEILM ASE I+TP+MTCP    K+++DA  L AK+ 
Sbjct: 1175 TLNTFHLAGR-GEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKNDAQSLLAKVK 1233

Query: 3705 KVSVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILF 3884
            K++VAD++ESMEV ++P S++ +Q   LYKL +KL   +       +S EDCE TL  +F
Sbjct: 1234 KITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVF 1287

Query: 3885 VDELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXX 4064
            + ELE AI +HL +LSKI GI+N    SES + +ET+ +   ++ ++             
Sbjct: 1288 LRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRREE----EMLDDDDDD 1343

Query: 4065 XXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDAEVD 4244
                   L  DAQKRKQQ                 D    E E +A  E E  +   E+D
Sbjct: 1344 EDERTEDLSSDAQKRKQQTTDEMDYDD------DEDEAEAEAEATAEIEDEKSEQTDEID 1397

Query: 4245 NYIDGEVQIFDAED-----ESRQRSVSNPKSTEKKHKSEV---KRKPTRAAKSGDRSVFV 4400
            N  + E      E+     +S +  +SN K+++ K K+ V   K+K  R+ K  DR VFV
Sbjct: 1398 NGDEEENGDRGNEEHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFV 1457

Query: 4401 EAKGLDFEVHLRFTDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI-------------- 4538
            + +GL FEVH RF +EP+ILL+++AQK AK VY+K +G I+QC ++              
Sbjct: 1458 DVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDEN 1517

Query: 4539 -------EKDKEY-QLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLI 4694
                   + D  Y  L+ AGV+F  FW+MQ+DLD+  I +N+I A+  TYGVEAARA+++
Sbjct: 1518 QTKQQRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASIL 1577

Query: 4695 KQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSRHG-MAVSTSPFSKMSYETAADFI 4871
            ++V+ VF  +G+ ++ RHLSLIADFMT  G Y+PMSRHG ++ S SPF KMS+ETA+ FI
Sbjct: 1578 REVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFI 1637

Query: 4872 IEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKV 4985
            +EAA HG  D LE+PS+RICLGLPVKMGTG FD+MQ++
Sbjct: 1638 VEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQEL 1675


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score = 1639 bits (4243), Expect = 0.0
 Identities = 905/1707 (53%), Positives = 1145/1707 (67%), Gaps = 53/1707 (3%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            MA  TEG+T  V+AV F  LTDEE+ K S VKITNP L D L +P  GGLYDPALGP  E
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             +PC+SCGQ S+ CPGH GHI+LV P+Y            +++CF CH+F+     VE  
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELR 120

Query: 387  TSQLELIIKGDVVGAKNI-AAQLSESLPCGENETINMKDVTCHSETKHLERSSWTSIQHG 563
             +QLELI+KG++  AKN+ A  L ES    +       D  C S+ +  E  +WTS+Q  
Sbjct: 121  ANQLELIMKGNIAKAKNLDAINLDESADLSDGN-----DSQCSSDEQLGE--NWTSLQFS 173

Query: 564  EAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKLKQSFL 740
            EAMS+L  FL          G  +P  T PTFGW ++  +S    RANV+ G     +  
Sbjct: 174  EAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGIDASLAS- 232

Query: 741  GEGEQKFSAGGVETTHDLFASGNIVDSDDVE--SSGAVYDEMSDSATKTHKKKGHSLPTE 914
                        E  HD  + GN  D+ DVE  +SG   D  + +A + +K   H+    
Sbjct: 233  ------------EIIHDDISLGN-GDTTDVEDITSG---DTANSNAKRQNKLARHNK--- 273

Query: 915  FLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEAL 1094
                    SG LLP++    +++LWENE RLC  ISDIQ  G     K+  HSMFF++ +
Sbjct: 274  -------LSGSLLPSQVQGILELLWENEARLCLYISDIQGQGF---GKKAGHSMFFLDNI 323

Query: 1095 LVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQSV 1274
             VPPIKFRPP+KG   V EH QT LL++VL+ N+SLG AHLN S  S V+ RWM+LQ+SV
Sbjct: 324  YVPPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSV 383

Query: 1275 NVLFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEIG 1454
            N+LF NK   GQ+D   TGICQLLEKKEGIFRQK+MGKRVNYACRSVISPDPYLAVNEIG
Sbjct: 384  NLLFDNKTASGQKDLV-TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIG 442

Query: 1455 IPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSIS 1634
            IPPYFALRLTYPERVTPWN  +LRNAI+NGPE HPGAT Y DK + +KL   R+SR+  S
Sbjct: 443  IPPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTS 502

Query: 1635 RKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGE 1814
            RKL SSRGV++  GK  ++E EGKVVYRHL+DGDVVLVNRQPTLHKPSIMAHVVRVLKGE
Sbjct: 503  RKLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGE 562

Query: 1815 KTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLIQ 1994
            KT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ PTSGD  R LIQ
Sbjct: 563  KTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQ 622

Query: 1995 DHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHVLP 2174
            DHIVSA LLTK+DTFL+ +E+N LLYS+GVS+   G   GK GQK+   NS+ EM    P
Sbjct: 623  DHIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPP 682

Query: 2175 AIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQSGEG--------- 2327
            AI+KP PLWTGKQVI++LL ++T  KG  PFTV+K + I   +F ++  EG         
Sbjct: 683  AIFKPEPLWTGKQVISALLYYIT--KGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSI 740

Query: 2328 --------KLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVFL 2483
                    KL I++N  V GV+DK+QFG YG+VHTVQE YGS+TAG+LLSALSRLFT FL
Sbjct: 741  KKDEPDEDKLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGILLSALSRLFTNFL 800

Query: 2484 QMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYKDGD-IDEMTLQVEMEK 2654
            QMHGFTCGVDDLL+ +  D ER    +    +G+ VH EF+G  +GD ID +T+Q+ +EK
Sbjct: 801  QMHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEK 860

Query: 2655 VMRVNGESATARLD-KMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFLMTASGA 2831
             +R NGE+A   LD KM+S+ N++ +  V   L        G+LKP  +N   LMT SGA
Sbjct: 861  KIRSNGEAAITYLDRKMISNLNSRTSTGVLKVLLSE-----GILKPSGKNWISLMTTSGA 915

Query: 2832 KGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRPQ 3011
            KGS VNFQQISS LGQQELEGKRVPRM+SGKTLPCF  WD S RAGGFI DR+LT LRPQ
Sbjct: 916  KGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQ 975

Query: 3012 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGED 3191
            EYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGED
Sbjct: 976  EYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGED 1035

Query: 3192 GVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKSTKDFINK 3371
            GVDVH+TSF++KF+ L+ N+++V      + +K     S+ YI +LP+AL+   + FI  
Sbjct: 1036 GVDVHQTSFINKFEALSTNKELVYSNCCRELDK-----SSPYINKLPDALKGKAEKFILD 1090

Query: 3372 LSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLNTFHHAG 3551
             S K  +S  S                  A+PGEPVGV+A+QS+GEP+TQMTLNTFH AG
Sbjct: 1091 SSSKQRNSG-SMTHTNFLHLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAG 1149

Query: 3552 QGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVSVADLVE 3731
            + GE+NVTLGIPRLQEIL  AS +I+TP MTCPL   K+ +DA RLA K+ K++VAD++E
Sbjct: 1150 R-GEMNVTLGIPRLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIE 1208

Query: 3732 SMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVDELEKAIR 3911
            SM+V VVP +V   + C++YKL MKL+ P+ YP+++D++L+D E+TL + FV  LE AI 
Sbjct: 1209 SMKVSVVPVTVQDGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIE 1268

Query: 3912 AHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXXXXXXXXXLG 4091
             ++ +L+KI GI N    ++ +     ++D    K                       LG
Sbjct: 1269 NNIALLAKISGITNFKTDAQPNSSNGAEDDPSNGKTND----DDDDDGDADDTEGAEDLG 1324

Query: 4092 VDAQKRKQQVKXXXXXXXXXXXXISTDG---ENIEG-EPSAGSESEVDQVDAEVDNYIDG 4259
            +DAQK K+QV                DG   E++EG E +  +E   D  D + D    G
Sbjct: 1325 LDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDLEGVEDAKDNEYVKDDGDGKDDEDGKG 1384

Query: 4260 EVQIFDAEDESRQRSVSNPKSTEKKHKSEVKRKPTRAAKSGDRSVFVEAKGLDFEVHLRF 4439
            +    D E     + V+   +  +  +   K +P   +K  DR V+V+ +   FE+H +F
Sbjct: 1385 DEDGSDIEVNENDKKVTLGANYSQGPEENSKSQP--VSKKFDRRVYVKFEKRHFEIHFKF 1442

Query: 4440 TDEPYILLSEIAQKAAKNVYIKRAGNINQCSVIE-----------------------KDK 4550
            T EP+ILL++IAQK A+ V I+  G + QC  I                        K+K
Sbjct: 1443 TGEPHILLAQIAQKTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKREEIPSSVKEK 1502

Query: 4551 EYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVFEDHGI 4730
               LQT+G++F++FW+MQ+DL++ ++ SN++HA+  TYGVEAA+ T+I++V+ VF+ +GI
Sbjct: 1503 IPALQTSGIHFKSFWEMQDDLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGI 1562

Query: 4731 SVNIRHLSLIADFMTQQGRYRPMSRHG-MAVSTSPFSKMSYETAADFIIEAAYHGEVDYL 4907
            SVNIRHL LIADFMT  G YRPMSR G +A STSPF K+ +ETA++FI+EAA HG+VD L
Sbjct: 1563 SVNIRHLMLIADFMTHSGCYRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNL 1622

Query: 4908 ESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            +SPSARICLGLPVKMGTG  +L+QK++
Sbjct: 1623 DSPSARICLGLPVKMGTGCHELIQKLE 1649


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score = 1632 bits (4227), Expect = 0.0
 Identities = 904/1712 (52%), Positives = 1150/1712 (67%), Gaps = 58/1712 (3%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDE 206
            MA  TEG+T  V+AV F  LTDEE+ K S VKITNP L D L +P  GGLYDPALGP  E
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 207  ATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQC 386
             +PC+SCGQ S+ CPGH GHI+LV P Y            +++CF CH+F+   + VE  
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELR 120

Query: 387  TSQLELIIKGDVVGAKNI-AAQLSESLPCGENETINMKDVTCHSETKHLERSSWTSIQHG 563
             +QLELI+KG++  AKN+    L ES    + +     D  C S  +  E  +WTS+Q  
Sbjct: 121  ANQLELIMKGNIAKAKNLDEINLDESADLCDGD-----DSQCSSAEQLGE--NWTSLQFS 173

Query: 564  EAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKLKQSFL 740
            EAMS+L  FL          G  +P  T PTFGW ++  +S    RANV+ G+ +  +  
Sbjct: 174  EAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVSLAS- 232

Query: 741  GEGEQKFSAGGVETTHDLFASGNIVDSDDVE--SSGAVYDEMSDSATKTHKKKGHSLPTE 914
                        E  HD  + GN  D+ DVE  +SG + +  +    K  +   H+L   
Sbjct: 233  ------------EIIHDDISLGN-GDTTDVEDITSGDIANSNAKRHNKEKQISSHTL--- 276

Query: 915  FLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEAL 1094
                    +G LLP++    +++LWEN+ RLC  ISDIQ  GL + +K G HSMFF+E +
Sbjct: 277  --------AGSLLPSQVQRILELLWENDARLCLYISDIQ--GLGIGKKAG-HSMFFLENI 325

Query: 1095 LVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQSV 1274
             VPPIKFRPP+KG   V EH QT LL++VL+ N+SLG AHLN S  S V+ RWM+LQ+SV
Sbjct: 326  YVPPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSV 385

Query: 1275 NVLFGNKKNIGQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEI 1451
            N+LF NK   G+ + +  TGICQLLEKKEGIFRQK+MGKRVNYACRSVISPDPYLAVNEI
Sbjct: 386  NLLFDNKTASGESQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEI 445

Query: 1452 GIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSI 1631
            GIPPYFALRLTYPERVTPWN  +LRNAI+NGPE HPGAT Y DK + +KL   R+SR+  
Sbjct: 446  GIPPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLT 505

Query: 1632 SRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKG 1811
            SR+L SSRGV++  GK  ++E EGKVVYRHL+DGDVVLVNRQPTLHKPSIMAHVVRVLKG
Sbjct: 506  SRRLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKG 565

Query: 1812 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLI 1991
            EKT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ PTSGD  R LI
Sbjct: 566  EKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALI 625

Query: 1992 QDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHVL 2171
            QDHIVSA LLTK+DTFL+ +E+N LLYS+GVS+   G   GK GQK+   NS+ EM    
Sbjct: 626  QDHIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFP 685

Query: 2172 PAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQSGEG-------- 2327
            PAI+KP PLWTGKQVI++LL ++T  KG  PFTV+K + I   +F ++  EG        
Sbjct: 686  PAIFKPEPLWTGKQVISALLYYIT--KGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTS 743

Query: 2328 ---------KLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVF 2480
                     KL I+KN  V GV+DK+QFG YG+VHTVQE YGS+TAG LLSALSRLFT F
Sbjct: 744  IKKDEPDEDKLLIYKNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGFLLSALSRLFTNF 803

Query: 2481 LQMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYKDGD-IDEMTLQVEME 2651
            LQMHGFTCGVDDLL+ +  D ER    +    +G+ VH EF+G  +GD ID +T+Q+ +E
Sbjct: 804  LQMHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVE 863

Query: 2652 KVMRVNGESATARLD-KMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFLMTASG 2828
            K +R NGE+A   LD KM+S+ N++ ++ V  +L        G+LKP  +N   LMT SG
Sbjct: 864  KKIRSNGEAAITYLDRKMISNLNSRTSSGVLKELLSE-----GILKPSGKNWISLMTTSG 918

Query: 2829 AKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRP 3008
            AKGS VNFQQISS LGQQELEGKRVPRM+SGKTLPCF  WD S RAGGFI DR+LT LRP
Sbjct: 919  AKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRP 978

Query: 3009 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGE 3188
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGE
Sbjct: 979  QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGE 1038

Query: 3189 DGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKSTKDFIN 3368
            DGVDVH+TSF++KF+ L+ N+++V      + ++     S+ YI +LP+AL+   + FI 
Sbjct: 1039 DGVDVHQTSFINKFEALSTNKELVYSNCCRELDE-----SSPYINKLPDALKGKAEKFIR 1093

Query: 3369 KLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLNTFHHA 3548
              S K  +S  S                  A+PGEPVGV+A+QS+GEP+TQMTLNTFH A
Sbjct: 1094 DSSSKQRNSG-SMTHTNFLQLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLA 1152

Query: 3549 GQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVSVADLV 3728
            G+ GE+NVTLGIPRLQEIL  AS +I+TP MTCPL   K+ +DA RLA K+ K++VAD++
Sbjct: 1153 GR-GEMNVTLGIPRLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADII 1211

Query: 3729 ESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVDELEKAI 3908
            ESM+V VVP +V   + C++YKL MKL+ P+ YP+++D++L+D E+TL + FV  LE AI
Sbjct: 1212 ESMKVSVVPVTVQDGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAI 1271

Query: 3909 RAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXXXXXXXXXL 4088
              ++ +L+KI GI N   ++++        +D  S  K                     L
Sbjct: 1272 ENNIALLAKISGITNF--KTDAQPNSSNGAEDDPSNGKTNDDDDDDDDGDADDTEGAEDL 1329

Query: 4089 GVDAQKRKQQVKXXXXXXXXXXXXISTDG---ENIEG-EPSAGSESEVDQVDAEVDNYID 4256
            G+DAQK K+QV                DG   E++EG E +  +E   D  D + D    
Sbjct: 1330 GLDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDLEGVEDAKDNEHVKDDGDGKDDEDGK 1389

Query: 4257 GEVQIFDAEDESRQRSVSNPKSTEKKHKSEVKRKPTRAAKSGDRSVFVEAKGLDFEVHLR 4436
            G+    D E     + V+   +  +  +   K +P   +K  DR V+V+ +   FE+H +
Sbjct: 1390 GDEDGSDIEVNENDKKVTLGVNYSQGPEENSKSQP--VSKKFDRRVYVKFEKRHFEIHFK 1447

Query: 4437 FTDEPYI----LLSEIAQKAAKNVYIKRAGNINQCSVIE--------------------- 4541
            FTDEP+I    LLS IAQK A+ V I+  G + QC  I                      
Sbjct: 1448 FTDEPHILLAQLLSTIAQKTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKREEIPS 1507

Query: 4542 --KDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVF 4715
              K+K   LQT+G++F++FW+MQ+DL++ ++ SN++HA+  TYGVEAA+ T+I++V+ VF
Sbjct: 1508 SVKEKIPALQTSGIHFKSFWEMQDDLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVF 1567

Query: 4716 EDHGISVNIRHLSLIADFMTQQGRYRPMSRHG-MAVSTSPFSKMSYETAADFIIEAAYHG 4892
            + +GISVNIRHL LIADFMT  G YRPMSR G +A STSPF K+ +ETA++FI+EAA HG
Sbjct: 1568 KSYGISVNIRHLMLIADFMTHSGCYRPMSRKGSIADSTSPFLKICFETASNFIVEAACHG 1627

Query: 4893 EVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
            +VD L+SPSARICLGLPVKMGTG  +L+QK++
Sbjct: 1628 QVDNLDSPSARICLGLPVKMGTGCHELIQKLE 1659


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score = 1603 bits (4152), Expect = 0.0
 Identities = 874/1700 (51%), Positives = 1137/1700 (66%), Gaps = 46/1700 (2%)
 Frame = +3

Query: 27   MAHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPL-D 203
            MA   EG+T  +E+V F  LT+EE+ K S VK+T+  L +++  P  GGLYDPA GPL D
Sbjct: 1    MALANEGATNAIESVAFSFLTNEELLKSSRVKVTDTNLCNNIGHPVRGGLYDPAFGPLLD 60

Query: 204  EATPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQ 383
              + C SCG     C GH GHI+LV P+Y             ++CF CHYF+   + V++
Sbjct: 61   NRSNCESCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASRDEVKR 120

Query: 384  CTSQLELIIKGDVVGAKNIA-AQLSESLPCGENETINMKDVTCHSETKHLERSSWTSIQH 560
              SQLELI+KG++  AK++   +L+E++   +++     D +  S  + L   SWTS+Q 
Sbjct: 121  RASQLELILKGNISKAKSLGEIKLNETIDSVDDD----DDDSQWSGAEQL-GESWTSLQF 175

Query: 561  GEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKLKQSF 737
             EAMS++  FL          G  SP  T PTFG   +  +S+   RANV+  +K     
Sbjct: 176  SEAMSVIYEFLAKDYKKCLNCGCISPKITKPTFGRFNVKALSSVQARANVISSAK----- 230

Query: 738  LGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPTEF 917
                                A+    D +D+ S GA            +    + + +  
Sbjct: 231  --------------------AADVQADEEDITSGGA-----------GNSNGNNQILSIK 259

Query: 918  LKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEALL 1097
            L +    SG LLP++    IK+LW+NE+RLCS ISDIQ  G     K+  HSMFF+E + 
Sbjct: 260  LVEQSSLSGSLLPSQVQEMIKLLWKNESRLCSHISDIQDQGF---GKKAGHSMFFLENIF 316

Query: 1098 VPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQSVN 1277
            VPPIKFRPP K G +V EHPQT LLS+VL+ N+SL +AH   S    ++ RW +LQ SVN
Sbjct: 317  VPPIKFRPPLKAGDNVAEHPQTVLLSKVLESNISLADAHRTKSDAYYILRRWQDLQGSVN 376

Query: 1278 VLFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEIGI 1457
            +LF NK ++  + +A +GICQLL+KKEGIFRQK+MGKRVNYACRSVISPDPYLAVNEIGI
Sbjct: 377  LLFDNKTSLRSQKDA-SGICQLLDKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 435

Query: 1458 PPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSISR 1637
            PPYFALRLTYPERVTPWN+ KL +AI+NGP+ HPGA  Y DK + ++L + +  R+S SR
Sbjct: 436  PPYFALRLTYPERVTPWNSAKLMDAILNGPDTHPGAILYTDKTSTLRLQKDKSLRSSTSR 495

Query: 1638 KLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 1817
            +L SSRGV++  GK  EHE EGKVVYRHL+DGDVVLVNRQPTLHKPSIMAHVVRVLKGEK
Sbjct: 496  RLQSSRGVIMHHGKIHEHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 555

Query: 1818 TIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLIQD 1997
            T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ PTSGD  R LIQD
Sbjct: 556  TVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQD 615

Query: 1998 HIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHVLPA 2177
            HIVSA LLTK+DTFL+  E+N LLYS+GVS+   G+   K GQKV   NSE EM    PA
Sbjct: 616  HIVSAALLTKKDTFLSCQEFNQLLYSSGVSMTGMGSFSCKPGQKVLMSNSESEMFLFPPA 675

Query: 2178 IWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQSG------------ 2321
            I+KP PLWTGKQVI++LL ++T  KG  PFTV+K + I   +F +Q+G            
Sbjct: 676  IFKPEPLWTGKQVISALLCYIT--KGRPPFTVEKNAKIPSSFFKTQTGEIKKHTKDTSRK 733

Query: 2322 ----EGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVFLQM 2489
                E KL I++N  V GV+DK+QFG YG+VHTVQE YGS+TAG+LLSALSRLFT FLQM
Sbjct: 734  KDELEDKLLIYRNDLVRGVVDKAQFGDYGMVHTVQEFYGSNTAGILLSALSRLFTNFLQM 793

Query: 2490 HGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYKDGD-IDEMTLQVEMEKVM 2660
            HGFTCGVDDLLI    D ER    +    +G+ VH EF+G  + + ID +T+Q+ +EK +
Sbjct: 794  HGFTCGVDDLLIKVGKDSERLNQLESCEEIGDIVHREFIGVMESENIDPITMQLNVEKKI 853

Query: 2661 RVNGESATARLD-KMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFLMTASGAKG 2837
            R NGE+A   LD KM+S+ N++ ++ V  +L        G LKP  +N   LMT SGAKG
Sbjct: 854  RSNGEAAITYLDRKMISNLNSRTSSGVLKELLSK-----GSLKPSGKNWISLMTTSGAKG 908

Query: 2838 SQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRPQEY 3017
            S VNFQQISS LGQQELEGKRVPRM+SGKTLPCFP WD S RAGGFI DR+LT LRPQEY
Sbjct: 909  SMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPSWDCSPRAGGFIIDRFLTALRPQEY 968

Query: 3018 YFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGEDGV 3197
            YFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LKVCYDHTVRD+DGS++QF YGEDGV
Sbjct: 969  YFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVCYDHTVRDSDGSIIQFHYGEDGV 1028

Query: 3198 DVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKSTKDFINKLS 3377
            DVH+TSF++KF+ L++N++++      Q ++     S+ YI +LP+AL+   ++FI   S
Sbjct: 1029 DVHQTSFINKFEALSINKELIYSNCCRQLDR-----SSPYINKLPDALKGKAENFIRDFS 1083

Query: 3378 VKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLNTFHHAGQG 3557
             K  +S  S K                A+PGEPVGV+A+QS+GEP+TQMTLNTFH AG+ 
Sbjct: 1084 SKQRNSS-SMKEADFLQVMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGR- 1141

Query: 3558 GEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVSVADLVESM 3737
            GE+NVTLGIPRL EI++ AS+NI+TP MTCPL   K+ +DA RLA K+ K++VAD++ESM
Sbjct: 1142 GEMNVTLGIPRLHEIVVAASKNIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESM 1201

Query: 3738 EVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVDELEKAIRAH 3917
            +V VVP +V + + C++YKL MKL+ P+ YP+++D++LED E+TL + FV ELE AI  H
Sbjct: 1202 KVSVVPVAVKEGRICSIYKLTMKLHKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIENH 1261

Query: 3918 LLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXXXXXXXXXLGVD 4097
            + +L++I GIK+   +S S  G + D+ +  + ++                      G D
Sbjct: 1262 ISLLARISGIKDFQGKSNSSNGLDNDHSNESASNQNGQTDDDDEVGDTEDAEED---GFD 1318

Query: 4098 AQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDAEVDNYIDGEVQIFD 4277
            AQK KQ+                 + E  +GE S   E   D  D E DN ++      D
Sbjct: 1319 AQKSKQRATDEVDYDD------GPEEETHDGEKSEDVEVSEDGKDDEDDNGVEVNGDDSD 1372

Query: 4278 AEDESRQRSVSNPKSTEKKHKSEVKRKPTRAAKSGDRSVFVEAKGLDFEVHLRFTDEPYI 4457
             E     ++V+  ++++ K     KRK   A+K  DR V+V+A G+ FE+H +F  EP+I
Sbjct: 1373 IEVNDSDKNVTLEETSKSK-----KRKFEPASKKYDRRVYVKAGGMRFEIHFKFIGEPHI 1427

Query: 4458 LLSEIAQKAAKNVYIKRAGNINQCSVIE-----------------------KDKEYQLQT 4568
            LL++IAQ+ A+ V I+  G + QC  I                        K+K   LQT
Sbjct: 1428 LLAQIAQRTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKRDDIPSSVKEKIPALQT 1487

Query: 4569 AGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVFEDHGISVNIRH 4748
            +G++F+ FW+M++DL + ++ SND+HA+ + YGVEAA+  +I++V+ VF+ +GISVNIRH
Sbjct: 1488 SGIHFKTFWEMEDDLKVRYVYSNDVHAILKAYGVEAAKEVIIREVQNVFKSYGISVNIRH 1547

Query: 4749 LSLIADFMTQQGRYRPMSRHGMAVSTSPFSKMSYETAADFIIEAAYHGEVDYLESPSARI 4928
            L LIADFMT  G YRP++R G+A STSPF K+SYETA++FI+EAA HG+VD LE+PS+RI
Sbjct: 1548 LMLIADFMTHSGSYRPLTRSGIADSTSPFVKISYETASNFIVEAARHGQVDTLETPSSRI 1607

Query: 4929 CLGLPVKMGTGSFDLMQKVQ 4988
            CLGLPVKMGTG  DL+QK++
Sbjct: 1608 CLGLPVKMGTGCIDLIQKLE 1627


>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score = 1598 bits (4138), Expect = 0.0
 Identities = 897/1759 (50%), Positives = 1139/1759 (64%), Gaps = 109/1759 (6%)
 Frame = +3

Query: 36   TTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDEATP 215
            +TE +TE VEAV+FG  TDEE RKHS VKITNP L D L  P PGGLYDPA+G LDE + 
Sbjct: 3    STECTTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI 62

Query: 216  CRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQCTSQ 395
            C SCGQR++ C GHCGHI+LV   Y             K+C +C  F    E  E   SQ
Sbjct: 63   CESCGQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQ 122

Query: 396  LELIIKGDVVGAKNIAAQLSES------LPCGENETINMKDV----TCHSET-------- 521
            LELI KGD+ GAK +A   S            +++T   +D       HS          
Sbjct: 123  LELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHF 182

Query: 522  KHLERSSWTSIQHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN--MSNKNT 695
            K  E++SW+S Q  EA+S+++ +L            + P  + PTFGW  +    S K  
Sbjct: 183  KDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAI 242

Query: 696  RANVLHGSKLKQSFLGEGEQKFSA----GGVETTHDLFASGNIVDSDDVESSGAVYDEMS 863
            R NV+   KL +S    GE  FS+     G  + +D        DS+ VES+  +    +
Sbjct: 243  RENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMND--------DSETVESNSFI---AT 291

Query: 864  DSATKTHKKKGHSLPTEFLKQMK----FFSGPLLPTEASHHIKMLWENENRLCSLISDIQ 1031
             ++TK  KKKG +   +          + SGPLLP++    +K+LWE E   CS ISDIQ
Sbjct: 292  SNSTKKSKKKGVNRAKKLNPGSGDPNFYLSGPLLPSQVRDILKLLWEKEASFCSYISDIQ 351

Query: 1032 QDGLCVSEKRGNHSMFFIEALLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNA 1211
            +        +  +SMFF+E +LVPPI+FRPP+KGG SVMEHPQT LL +VLQ N++LGNA
Sbjct: 352  RQKCKPFGNKTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNA 411

Query: 1212 HLNNSQRSRVVPRWMELQQSVNVLFGNK--KNIGQRDNAGTGICQLLEKKEGIFRQKLMG 1385
            H+ N+++S+++ RWMELQQS+NV F +K   ++ Q+D+   GICQ LEKKEGIFRQK+MG
Sbjct: 412  HV-NAEKSKIISRWMELQQSINVYFDSKTATSLAQKDSI-AGICQFLEKKEGIFRQKMMG 469

Query: 1386 KRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGA 1565
            KRVN+ACRSVISPDPYLAVNEIGIPPYFAL+LTYPERVTPWNA KLR A++NGP++HPGA
Sbjct: 470  KRVNFACRSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWNAAKLRGAVVNGPDIHPGA 529

Query: 1566 THYIDKFAKIKLAQSRKSRNSISRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVL 1745
            T Y+D    +KL  S+K R +ISRKLPSSRGVV Q GK  + E EGK V+RHLQDGD+VL
Sbjct: 530  TTYVDSVTIVKLPPSQKMRVAISRKLPSSRGVVTQSGKFDDLEFEGKTVHRHLQDGDIVL 589

Query: 1746 VNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAL 1925
            VNRQPTLHKPSIMAHVVRVL GE+T+RMHYANCS+YNADFDGDE+NVHFPQDEISRAEA 
Sbjct: 590  VNRQPTLHKPSIMAHVVRVLHGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAY 649

Query: 1926 NIVNANNQYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGA 2105
            NIVNAN QYI+PT GDT RGLIQDHIV AVLLT ++TF+   E+N LLY +GV     G+
Sbjct: 650  NIVNANEQYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGS 709

Query: 2106 PIGKSGQKVCSINSEDEMQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPS 2285
                + +KV  I++E  ++ VLPAIWKP PLWTGKQVIT+LLNH+TR  G  PFTV+   
Sbjct: 710  LPKNNSRKVTLIDTEGVVESVLPAIWKPEPLWTGKQVITALLNHITR--GCAPFTVENQG 767

Query: 2286 TIRKEYF-----------GSQSGEGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSH 2432
             I K YF             Q+ E  L + KN  V GVIDK+QFGK+GLVHTVQELYG+ 
Sbjct: 768  KIPKNYFFGNSYTRGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGAS 827

Query: 2433 TAGVLLSALSRLFTVFLQMHGFTCGVDDLLIVKSLDLERK-KIFDRRVGEQVHAEFLGYK 2609
            +AG+ LSALSR+FT+FLQ+HGFTCGVDDL+I+   D +RK K+    VGE VH +F+ +K
Sbjct: 828  SAGIFLSALSRVFTLFLQIHGFTCGVDDLIILPDYDDQRKEKLEGEDVGEVVHCDFVKFK 887

Query: 2610 DGDIDEMTLQVEMEKVMRVNGESATARLD-KMMSSRNAKLTNEVNDKLFPSNSSPVGLLK 2786
             G I    LQ+E+EKV+  + ESATA LD KM +  N+KLT E +  L   +    GLLK
Sbjct: 888  PGQIGPDELQLEIEKVICTDRESATASLDMKMKNKLNSKLTREGSQIL--KHLLTAGLLK 945

Query: 2787 PFPRNCFFLMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRA 2966
            PFP+NC  +MT +GAKGS VNFQQIS+ LGQQELEGKRVPRM+SGKTLP FPPWD +SRA
Sbjct: 946  PFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRA 1005

Query: 2967 GGFISDRYLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTV 3146
            GGFI+DR+LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVK+LE LKVCYD+TV
Sbjct: 1006 GGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTV 1065

Query: 3147 RDADGSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKE 3326
            RDADGS+VQF+YGEDG+DVH+TSFL+ FK L  N++ + ++   + E       N YIK+
Sbjct: 1066 RDADGSIVQFYYGEDGIDVHRTSFLNNFKALQDNRETICQKFQHKRE------FNSYIKK 1119

Query: 3327 LPEALEKSTKDFINKLSVKH------------HSSRLSRKPK---------------GIX 3425
            LPE LE+  K FI +   K             HSSR +RK +                  
Sbjct: 1120 LPEGLEEEAKRFIQETQNKSLAKQSTSAGEGPHSSRKARKKEKLLKKEKAAAAYEQDAFL 1179

Query: 3426 XXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLNTFHHAGQGGEVNVTLGIPRLQEIL 3605
                       A+ GEPVGVIAAQS+GEPSTQMTLNTFH AG+ GE+NVTLGIPRLQEIL
Sbjct: 1180 ELVKQKYLSSLAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGR-GEMNVTLGIPRLQEIL 1238

Query: 3606 MRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVSVADLVESMEVCVVPFSVHKNQACT 3785
            M ASE I+TP++TCP  + +++ +   L + + KVSVADL+E+ME   V  SV+   A  
Sbjct: 1239 MSASEVIKTPLLTCPFSQWRSKREVVSLVSHVKKVSVADLIENME---VQLSVNHKTAAR 1295

Query: 3786 LYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVDELEKAIRAHLLMLSKIGGIKNIVQR 3965
            +YKLKM L   E       +SLE+  +TL   F+ ELE AI  H+L LS++ GIKN    
Sbjct: 1296 VYKLKMTLKDTEF------VSLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNFASN 1349

Query: 3966 SESDEGEETDNDDPGSKHKQXXXXXXXXXXXXXXXXXXXXLGVDAQKRKQQVKXXXXXXX 4145
             +     E D D+ G   +                     LG D QKRKQQ         
Sbjct: 1350 PKPKSSNEADEDESGLGTEN---AGVNDDDDDDDDDKGDDLGSDVQKRKQQATDDMDYED 1406

Query: 4146 XXXXXIS-----------TDGENIEGEPSAGSESEVDQVDAEVDNYIDGEVQIFD-AEDE 4289
                  +           +D EN+E E   G + E +  D   D      VQ  D A  E
Sbjct: 1407 GSDGGAAEDDDSDLEKGKSDVENLE-EDETGKDEESEHTD---DKDEASNVQNEDEAISE 1462

Query: 4290 SRQRSVSNPKSTEKKHKSEVKRKPTRAAKSGDRSVFVEAKGLDFEVHLRFTDEPYILLSE 4469
              + SV + K      KS V+ K     K   R+ ++  KG  FEVH  F +EP++L+++
Sbjct: 1463 GTKSSVGSSKGKTSFDKSSVELK----GKKIRRAFYMVVKGTKFEVHFEFHEEPHMLIAQ 1518

Query: 4470 IAQKAAKNVYIKRAGNINQCSVIEKDKE--------------------------YQLQTA 4571
            +AQK +K VYI+++G ++QC ++  D +                          + ++ +
Sbjct: 1519 LAQKTSKKVYIRKSGKVSQCKMVSYDPDEKTVIWDNSKKPKRGESKSEEEDTSYWAVKAS 1578

Query: 4572 GVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVFEDHGISVNIRHL 4751
            GV+F++FW+M +DLD++ + SN+IHA+  TYGVEAARAT+I++V+ VF+ +G+ ++ RHL
Sbjct: 1579 GVDFKSFWEMHDDLDLSRLYSNNIHAMLTTYGVEAARATIIREVKHVFDIYGVKIDYRHL 1638

Query: 4752 SLIADFMTQQGRYRPMSRHG-MAVSTSPFSKMSYETAADFIIEAAYHGEVDYLESPSARI 4928
            SLIAD MT  G Y PMSRHG ++ S SPF KMS+ETA+ FI+EAA HG  D L++PS+RI
Sbjct: 1639 SLIADHMTHTGSYLPMSRHGSISESLSPFLKMSFETASKFIVEAASHGLTDKLDTPSSRI 1698

Query: 4929 CLGLPVKMGTGSFDLMQKV 4985
            CLGLPVKMGTGSFD+MQ++
Sbjct: 1699 CLGLPVKMGTGSFDVMQQL 1717


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score = 1592 bits (4123), Expect = 0.0
 Identities = 864/1711 (50%), Positives = 1137/1711 (66%), Gaps = 58/1711 (3%)
 Frame = +3

Query: 30   AHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDEA 209
            A TTEG+++ VE+V+F  +T+++VRKHSF+K+T+P L D+++ P PGGLYDP +GPL++ 
Sbjct: 4    AQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPLNDK 63

Query: 210  TPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQCT 389
              C+SCGQ    CPGHCGHI+LV PIY            Q++CFFCH+F  +   V++C 
Sbjct: 64   EACKSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVKKCV 123

Query: 390  SQLELIIKGDVVGAKNIAAQLSESLPCGENETINMK-----DVTCHSETKHLERSSWTSI 554
            SQL+LI+KGD+V AK +  +   +    E+  ++ +     D +   E   +E   WTS+
Sbjct: 124  SQLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWTSL 183

Query: 555  QHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMNMSNKNT-RANVLHGSKLKQ 731
            Q  E  +++  F+           AK+P    P FGW+ M   N +   AN++ G K+K+
Sbjct: 184  QFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKK 243

Query: 732  SFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPT 911
            S                      + ++ + DD   SG      ++ + K  ++K   +  
Sbjct: 244  S----------------------TSSVENPDD---SGIDALSEAEDSDKEKREKSTEIAK 278

Query: 912  EFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEA 1091
            EF KQ K     LLP+E    +K LWENE+  CS I D+ Q G   SEK  ++SMFF+E+
Sbjct: 279  EFEKQ-KDTKRDLLPSEVRAILKNLWENEHEYCSFIGDLWQSG---SEKI-DYSMFFLES 333

Query: 1092 LLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQS 1271
            +LVPPIKFRPP+KGG SVMEHPQT  L++VL  N++LGNA  N   +S+V+ RWM LQ+S
Sbjct: 334  VLVPPIKFRPPTKGGDSVMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVISRWMNLQES 393

Query: 1272 VNVLFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEI 1451
            VNVLF +K    Q    G+GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPY+AVNEI
Sbjct: 394  VNVLFDSKAASVQSQKDGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNEI 453

Query: 1452 GIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSI 1631
            GIPP FAL+L YPERVTPWN  KLR AIINGP+VHPGATHY DK + +KL  S K R +I
Sbjct: 454  GIPPCFALKLIYPERVTPWNVEKLREAIINGPDVHPGATHYSDKLSTVKLPSSVKERTAI 513

Query: 1632 SRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKG 1811
            + KL SSRG   + GK+ +   EGKVVYR ++DGDVVLVNRQPTLHKPS+MAH+VRVLKG
Sbjct: 514  ANKLLSSRGATTELGKTCDINFEGKVVYRQMRDGDVVLVNRQPTLHKPSLMAHIVRVLKG 573

Query: 1812 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLI 1991
            EKT+R+HYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY  P++GD  R LI
Sbjct: 574  EKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALI 633

Query: 1992 QDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHVL 2171
            QDHIVS+VLLTKRDTFL  D +N LL+S+GV+ +   +  GKSG+KV    S+ E+  V+
Sbjct: 634  QDHIVSSVLLTKRDTFLDKDLFNQLLFSSGVTDMVLSSFSGKSGKKVTISASDAELLTVM 693

Query: 2172 PAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQS----------- 2318
            PAI KPVPLWTGKQVIT++LN +T  KG  PFTV+K + +  ++F  +S           
Sbjct: 694  PAILKPVPLWTGKQVITTVLNLIT--KGHPPFTVEKATKLPVDFFKCRSREVKPNTGDLT 751

Query: 2319 -------------GEGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSAL 2459
                          E KL I KN FV GVIDK+QF  +G+VHTV ELYGS+ AG LLS  
Sbjct: 752  KKKDIDESWKQDLNEDKLLIRKNEFVCGVIDKAQFADFGMVHTVHELYGSNAAGNLLSVF 811

Query: 2460 SRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYK-DGDIDEM 2630
            SRLFT FLQ+HGFTCGVDDL+I+K +D ER K      +VGE+V  +  G   D  ID  
Sbjct: 812  SRLFTAFLQIHGFTCGVDDLIILKDMDEERTKQLQECEKVGERVLRKTFGIDVDRQIDPQ 871

Query: 2631 TLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFF 2810
             ++  +E+++  +GESA A LD+ + +      N+ + K   ++    GLLK   +NC  
Sbjct: 872  DMRSRIERILYEDGESALASLDRSIVND----LNQCSSKGVMNDLLSDGLLKTPGKNCIS 927

Query: 2811 LMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRY 2990
            LMT SGAKGS+VNFQQISS LGQQ+LEGKRVPRM+SGKTLPCF PWD S RAGGFISDR+
Sbjct: 928  LMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRF 987

Query: 2991 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 3170
            L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LKV YD TVRDADGS++
Sbjct: 988  LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSII 1047

Query: 3171 QFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKS 3350
            QF YGEDGVDVH++SF+ KFK L VNQ +V +R    C +     S+ YI +LP +L+K 
Sbjct: 1048 QFQYGEDGVDVHRSSFIGKFKELTVNQDMVLQR----CSEDMLSGSSSYISDLPISLKKD 1103

Query: 3351 TKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTL 3530
             + F+  + +    +    + + +            A+PGEPVGV+AAQS+GEPSTQMTL
Sbjct: 1104 AEKFVEAMPMNERIASKFVRQEELLKLVKSKYFESLAQPGEPVGVLAAQSVGEPSTQMTL 1163

Query: 3531 NTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKV 3710
            NTFH AG+ GE+NVTLGIPRLQEILM A+ +I+TP+MTCPL KGKT++DA+ +  KL K+
Sbjct: 1164 NTFHLAGR-GEMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITDKLRKI 1222

Query: 3711 SVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVD 3890
            +VAD+++ ME+ VVP+++HKN  C+++KLK+ LY PE YP+ +DI+ ED E+T+ ++F+ 
Sbjct: 1223 TVADIIKDMELSVVPYTIHKNDICSIHKLKINLYKPEHYPKNTDITEEDWEETMKVVFLR 1282

Query: 3891 ELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDDPGSKHKQXXXXXXXXXXXXXXX 4070
            +LE AI  H+ ML ++ GI+N VQ +    G ETDND+  S  +                
Sbjct: 1283 KLEDAIEIHMKMLHRMRGIRNFVQDTSPTAGNETDNDNSISGKQ-------TEDDDDGEG 1335

Query: 4071 XXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDAEVDNY 4250
                 LG DAQKRK+Q                 + E+   EPS+ S  E    D E+DN 
Sbjct: 1336 TEVDDLGSDAQKRKKQA--------TDEMDYEENSEDETNEPSSISGVE----DPEIDNE 1383

Query: 4251 IDGEVQIFDAEDESRQRSVSNPKSTEKKHKSEVKRKPTRAAKSGDRSVFVEAKGLDFEVH 4430
             + +V++       +Q+ V   K+ +++ K   K++        DR +FV+ +G  FEVH
Sbjct: 1384 -NEDVEVSKEGTPEQQKEVKKVKNVKQQSK---KKRRKYVGADEDRHIFVKGEGEKFEVH 1439

Query: 4431 LRF-TDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI----------------------- 4538
             +F T EP+ILL++IAQK A+ VYI+ +G I +C+V                        
Sbjct: 1440 FKFPTSEPHILLAQIAQKTAQKVYIQNSGKIERCTVANCGDPQVIYHGDDPKERREISND 1499

Query: 4539 EKDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVFE 4718
            EK     L  +GV+F A W+ Q+ LD+ ++ SN IH +   +GVEAAR T+I+++  VF+
Sbjct: 1500 EKKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARETIIREINHVFK 1559

Query: 4719 DHGISVNIRHLSLIADFMTQQGRYRPMSR-HGMAVSTSPFSKMSYETAADFIIEAAYHGE 4895
             +GISV+IRHL+LIAD+MT  G YRPMSR  G+A STSPF +M++ETA  FI++AA +GE
Sbjct: 1560 SYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGE 1619

Query: 4896 VDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
             D LE+PSARICLGLP   GTG FDLMQ+V+
Sbjct: 1620 KDTLETPSARICLGLPALSGTGCFDLMQRVE 1650


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score = 1582 bits (4096), Expect = 0.0
 Identities = 876/1751 (50%), Positives = 1135/1751 (64%), Gaps = 98/1751 (5%)
 Frame = +3

Query: 30   AHTTEGSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDEA 209
            A T EG+++ VE+V+F  +T+E+VRKHS +K+TNP L D+++ P PGGLYDP +GPLD+ 
Sbjct: 4    AQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPLDDR 63

Query: 210  TPCRSCGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQCT 389
            T C+SCGQ S  CPGHCGHI+LV PIY            Q++CFFCH+F      VE+C 
Sbjct: 64   TSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVERCV 123

Query: 390  SQLELIIKGDVVGAKNIAAQLSESLPCGENETINMKDVTCHSETKHLERSSWTSIQHGEA 569
            SQL+LI+KG++V AK + ++ ++S    E E   M+   C  E   + +  WTS+Q  E 
Sbjct: 124  SQLKLIMKGNLVAAKQLDSRATDSSE--ECEDSEMEKERC--EDSDMGKQRWTSLQFAEV 179

Query: 570  MSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWI-YMNMSNKNTRANVLHGSKLKQSFLGE 746
              L++ FL           AK P    P FGW+  + MS     ANV+ G K+K+S    
Sbjct: 180  TDLMNTFLRLKSKSCGSCKAKPPKLEKPMFGWVRIVGMSASAIGANVIRGIKVKKS---- 235

Query: 747  GEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPTEFLKQ 926
                  A  VE  +D         SDD  S      E+ D + K  K+K   +  EF K 
Sbjct: 236  ------ASSVENPND---------SDD--SGIDALSEVEDGSEKK-KRKSSEVAEEFAKH 277

Query: 927  MKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEALLVPP 1106
                   L P+E    +K LWENE+  CS I D+ Q       +  ++SMFF+E +LVPP
Sbjct: 278  QNNTRRDLFPSEVKKILKGLWENEHEFCSFIGDLWQS----ESENVDYSMFFLENILVPP 333

Query: 1107 IKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQSVNVLF 1286
             KFR P+KGG SVMEHPQT  L++VL+ N+SLGNA  N   + +++ RWM LQ+SVNVLF
Sbjct: 334  TKFRAPTKGGDSVMEHPQTVGLNKVLESNISLGNACTNKLDQPKIISRWMNLQESVNVLF 393

Query: 1287 GNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPY 1466
             +K    +    GTGICQ LEKKEG+FRQK+MGKRVN+ACRSVISPDP++AVN+IGIPP 
Sbjct: 394  DSKTATVKSQKEGTGICQTLEKKEGLFRQKMMGKRVNHACRSVISPDPFIAVNDIGIPPC 453

Query: 1467 FALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSISRKLP 1646
            FAL+LTYPERVTPWN  KLR AIINGP++HPGATHY DK + +KL  +RK+R +I+RKL 
Sbjct: 454  FALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKVSTMKLPPTRKARIAIARKLF 513

Query: 1647 SSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIR 1826
            SSRGV  + GK+ +   EGKVVYRH+QDGDVVLVNRQPTLHKPSIMAH+VRVLKGEKT+R
Sbjct: 514  SSRGVTTELGKTCDVNFEGKVVYRHMQDGDVVLVNRQPTLHKPSIMAHMVRVLKGEKTLR 573

Query: 1827 MHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLIQ---- 1994
            +HYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY  P++GD  R LIQ    
Sbjct: 574  LHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYSRPSNGDPLRALIQVVHP 633

Query: 1995 ----------------------------DHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSV 2090
                                        DHIVS+VLLTKRDTFL  DE+N LL+S+GV+ 
Sbjct: 634  SYFFKSLYSFHELGCLPVIFMDLACTQQDHIVSSVLLTKRDTFLDKDEFNQLLFSSGVTD 693

Query: 2091 VAQGAPIGKSGQKVCSINSEDEMQHVLPAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFT 2270
            +   +  G+SG+KV    S  E+  V PAI KPVPLWTGKQVIT++LN +T  KG  PF+
Sbjct: 694  MVLSSFSGRSGKKVIQSASNAELLTVTPAILKPVPLWTGKQVITAVLNEIT--KGHPPFS 751

Query: 2271 VKKPSTIRKEYFGSQS------------------------------GEGKLFIHKNYFVH 2360
            V+K + +  ++F  +S                               E KL + KN FV 
Sbjct: 752  VEKATKLPVDFFKCRSKEVKCKSGESNEKNHLTTKQDFDESWKKDLNEDKLLVRKNEFVR 811

Query: 2361 GVIDKSQFGKYGLVHTVQELYGSHTAGVLLSALSRLFTVFLQMHGFTCGVDDLLIVKSLD 2540
            GVIDK+QF  YGLVHTV ELYGS+ AG LLS  SRLFTVFLQ+ GFTCGVDDL+I+K +D
Sbjct: 812  GVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQLQGFTCGVDDLIILKDMD 871

Query: 2541 LERKKIFDR--RVGEQVHAEFLGYK-DGDIDEMTLQVEMEKVMRVNGESATARLDKMMSS 2711
             ER K      +VGE+V  +  G   D  ID   ++  +E+++  +GESA A LD+ + +
Sbjct: 872  GERTKQLQECEQVGERVLRKTFGIAVDVQIDPQDMKSRIERILYEDGESALASLDRSVVN 931

Query: 2712 RNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFFLMTASGAKGSQVNFQQISSLLGQQELE 2891
                  N+ + K   ++    GLLKP  +NC  LMT SGAKGS+VNFQQISS LGQQ+LE
Sbjct: 932  E----LNQCSSKGVMNDLLSDGLLKPPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLE 987

Query: 2892 GKRVPRMISGKTLPCFPPWDPSSRAGGFISDRYLTGLRPQEYYFHCMAGREGLVDTAVKT 3071
            GKRVPRM+SGKTLPCF PWD S RAGGFISDR+L+GLRPQEYYFHCMAGREGLVDTAVKT
Sbjct: 988  GKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKT 1047

Query: 3072 SRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFFYGEDGVDVHKTSFLSKFKTLAVNQ 3251
            SRSGYLQRCL+K+LE LKV YD TVRDADGS++QF YGEDGVDVH++SF+ KF+ L VNQ
Sbjct: 1048 SRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIGKFRELTVNQ 1107

Query: 3252 KVVQERLTDQCEKGKFINSNDYIKELPEALEKSTKDFINKLSVKHHSSRLSRKPKGIXXX 3431
             ++ +R    C +     S+ YI +LP  L+   + F+  + +    +    + + +   
Sbjct: 1108 DMILQR----CSEDMLSGSSSYITDLPITLKNGAEKFVEAMPMNERIASKLVRQEDLLKL 1163

Query: 3432 XXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTLNTFHHAGQGGEVNVTLGIPRLQEILMR 3611
                     A+PGEPVGV+AAQS+GEPSTQMTLNTFH AG+ GE+NVTLGIPRLQEILM 
Sbjct: 1164 VKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGR-GEMNVTLGIPRLQEILMT 1222

Query: 3612 ASENIQTPVMTCPLWKGKTRDDADRLAAKLMKVSVADLVESMEVCVVPFSVHKNQACTLY 3791
            A+ NI+TP+MTCPL KGKT DDA ++  KL K++VAD+++SMEV V+P++VH+ + C+++
Sbjct: 1223 AAANIKTPIMTCPLLKGKTTDDAKKITDKLRKIAVADIIKSMEVSVIPYAVHEGEVCSIH 1282

Query: 3792 KLKMKLYSPELYPRFSDISLEDCEKTLTILFVDELEKAIRAHLLMLSKIGGIKNIVQRSE 3971
            KLK+KLY PE YP+ +DI+ ED ++T+T++F+ +LE AI  H+ ML +I GIK+  + + 
Sbjct: 1283 KLKIKLYKPEHYPKHTDITDEDWKETMTVMFLRKLEDAIEIHVKMLVRIRGIKS-EKDTR 1341

Query: 3972 SDEGEETDNDDPGS-KHKQXXXXXXXXXXXXXXXXXXXXLGVDAQKRKQQVKXXXXXXXX 4148
               G ETDNDD  S KH +                    LG DAQK+K+Q          
Sbjct: 1342 PTSGNETDNDDSVSGKHTE-----DDDDDDEGEGTEVDDLGADAQKQKKQA--------V 1388

Query: 4149 XXXXISTDGENIEGEPSAGSESEVDQVDAEVDNYIDGEVQIFDAEDESRQRSVSNPKSTE 4328
                   + E+ + EPS+ S  E  + D E +N    EV   +  +      VS  ++ E
Sbjct: 1389 DVVDYEENSEDEKDEPSSISGVEDPETDNEDEN---AEVSREETPEPQEDADVSKEETLE 1445

Query: 4329 K----KHKSEVKRKPTRAAKSG--DRSVFVEAKGLDFEVHLRF-TDEPYILLSEIAQKAA 4487
                 K+  E  RK  R    G  DR +F + KG  FEVH +F ++EP+ILLS+IAQK A
Sbjct: 1446 PQKEVKNVEEGSRKKRRKFVPGKNDRHIFAKFKGKTFEVHFKFLSEEPHILLSQIAQKTA 1505

Query: 4488 KNVYIKRAGNINQCSVI-----------------------EKDKEYQLQTAGVNFQAFWK 4598
            + VYI+ +G I + +V                        EK     L  +GV+F A W+
Sbjct: 1506 QKVYIQNSGKIERSTVANCGDPQVIYYGDNPKEREEISNDEKKASPALHASGVDFLALWE 1565

Query: 4599 MQEDLDINHISSNDIHAVFQTYGVEAARATLIKQVRAVFEDHGISVNIRHLSLIADFMTQ 4778
             Q+ LD+ ++ SN IH +  T+GVEAAR T+I+++  VF+ +GISV+IRHL+LIAD+MT 
Sbjct: 1566 YQDKLDVRYLYSNSIHDMLNTFGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTF 1625

Query: 4779 QGRYRPMSR-HGMAVSTSPFSKMSYETAADFIIEAAYHGEVDYLESPSARICLGLPVKMG 4955
             G YRPMSR  G+A STSPF +M++ETA  FI++AA +GEVD LE+PSARICLGLP   G
Sbjct: 1626 SGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEVDRLETPSARICLGLPALSG 1685

Query: 4956 TGSFDLMQKVQ 4988
            TG FDL+Q+++
Sbjct: 1686 TGCFDLLQRME 1696


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score = 1580 bits (4092), Expect = 0.0
 Identities = 864/1723 (50%), Positives = 1132/1723 (65%), Gaps = 75/1723 (4%)
 Frame = +3

Query: 45   GSTECVEAVKFGILTDEEVRKHSFVKITNPTLFDHLDTPKPGGLYDPALGPLDEATPCRS 224
            G+++ VE+V+F  +T+++VRKHSF+K+T+P L D++  P PGGLYDP LGP+++   C +
Sbjct: 22   GASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVGEPYPGGLYDPKLGPIEDKKACDT 81

Query: 225  CGQRSFQCPGHCGHIDLVLPIYXXXXXXXXXXXXQKSCFFCHYFKDEVELVEQCTSQLEL 404
            CGQ +  CPGHCGHI+LV PIY            Q++CF CH+F  +   VE+  SQL+L
Sbjct: 82   CGQLNLACPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFICHHFMAKPYDVERAVSQLKL 141

Query: 405  IIKGDVVGAKNIAAQLSESLPCGENETINMKDVTCHS----------ETKHLERSSWTSI 554
            IIKGD+V AK    QL  + P   + +    DV+C S          E   +E   WTS+
Sbjct: 142  IIKGDIVSAK----QLESNTPTKSDSS----DVSCESGVTTDSSEGCEDSDMEDQRWTSL 193

Query: 555  QHGEAMSLLDGFLXXXXXXXXXXGAKSPIFTCPTFGWIYMN-MSNKNTRANVLHGSKLKQ 731
            Q  E  +++  F+           A +P    P FGW+ M  M   +  ANV+ G KLK+
Sbjct: 194  QFAEVTAVMKNFMRLSSKSCNRCKAVNPQLEKPMFGWVRMKAMKGSDIVANVIRGLKLKK 253

Query: 732  SFLGEGEQKFSAGGVETTHDLFASGNIVDSDDVESSGAVYDEMSDSATKTHKKKGHSLPT 911
            S                      + ++ + DD + SG       +   K  ++K   +  
Sbjct: 254  S----------------------TSSVENPDDFDDSGIDALSEVEDGDKETREKSTEVVK 291

Query: 912  EFLKQMKFFSGPLLPTEASHHIKMLWENENRLCSLISDIQQDGLCVSEKRGNHSMFFIEA 1091
            EF +        LLPTE    +K LWENE+  CS I D+ Q G   SEK  ++SMFF+E+
Sbjct: 292  EFEEHNNSSKRDLLPTEVREILKDLWENEHDFCSFIGDLWQSG---SEKI-DYSMFFLES 347

Query: 1092 LLVPPIKFRPPSKGGSSVMEHPQTTLLSQVLQCNLSLGNAHLNNSQRSRVVPRWMELQQS 1271
            +LVPPIKFRP +KGG SVMEHPQT  L++VL  N+ LGNA  N   +S+++ RWM LQ+S
Sbjct: 348  VLVPPIKFRPSTKGGDSVMEHPQTVGLNKVLGSNIQLGNACTNKLDQSKIISRWMNLQES 407

Query: 1272 VNVLFGNKKNIGQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEI 1451
            VNVLF +K    Q    G+GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPY+AVN+I
Sbjct: 408  VNVLFDSKTATVQSQREGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDI 467

Query: 1452 GIPPYFALRLTYPERVTPWNATKLRNAIINGPEVHPGATHYIDKFAKIKLAQSRKSRNSI 1631
            GIPP FAL+LTYPERVTPWN  KLR AIINGP++HPGATHY DK + +KL  + K+R +I
Sbjct: 468  GIPPCFALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKLSTVKLPSTEKARRAI 527

Query: 1632 SRKLPSSRGVVIQPGKSLEHEIEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKG 1811
            +RKL SSRG   + GK+ +   EGK V+RH++DGDVVLVNRQPTLHKPS+MAH+VRVL+G
Sbjct: 528  ARKLLSSRGATTELGKTCDINFEGKTVHRHMRDGDVVLVNRQPTLHKPSLMAHIVRVLRG 587

Query: 1812 EKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLI 1991
            EKT+R+HYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY  P++GD  R LI
Sbjct: 588  EKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALI 647

Query: 1992 QDHIVSAVLLTKRDTFLTWDEYNYLLYSTGVSVVAQGAPIGKSGQKVCSINSEDEMQHVL 2171
            QDHIVS+VLLTKRDTFL  D +N LL+S+GV+ +   +  G+SG+KV    S+ E+  V 
Sbjct: 648  QDHIVSSVLLTKRDTFLDKDHFNQLLFSSGVTDMVLSSFSGRSGKKVMVSASDAELLTVT 707

Query: 2172 PAIWKPVPLWTGKQVITSLLNHMTRIKGLRPFTVKKPSTIRKEYFGSQS----------- 2318
            PAI KPVPLWTGKQVIT++LN +T  KG  PFTV+K + +  ++F  +S           
Sbjct: 708  PAILKPVPLWTGKQVITAVLNQIT--KGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLT 765

Query: 2319 -------------GEGKLFIHKNYFVHGVIDKSQFGKYGLVHTVQELYGSHTAGVLLSAL 2459
                          E KL I KN FV GVIDK+QF  YGLVHTV ELYGS+ AG LLS  
Sbjct: 766  KKKKIDESWKQNLNEDKLLIRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVF 825

Query: 2460 SRLFTVFLQMHGFTCGVDDLLIVKSLDLERKKIFD--RRVGEQVHAEFLGYK-DGDIDEM 2630
            SRLFTVFLQ+HGFTCGVDDL+I+K +D ER K       VGE+V  +  G   D  ID  
Sbjct: 826  SRLFTVFLQIHGFTCGVDDLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQ 885

Query: 2631 TLQVEMEKVMRVNGESATARLDKMMSSRNAKLTNEVNDKLFPSNSSPVGLLKPFPRNCFF 2810
             ++  +E+++  +GESA A LD+ + +      N+ + K   ++    GLLK    NC  
Sbjct: 886  DMRSRIERILYEDGESALASLDRSIVND----LNQCSSKGVMNDLLSDGLLKTPGMNCIS 941

Query: 2811 LMTASGAKGSQVNFQQISSLLGQQELEGKRVPRMISGKTLPCFPPWDPSSRAGGFISDRY 2990
            LMT SGAKGS+VNFQQISS LGQQ+LEGKRVPRM+SGKTLPCF PWD S RAGGFISDR+
Sbjct: 942  LMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRF 1001

Query: 2991 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 3170
            L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LK+ YD TVRDADGS++
Sbjct: 1002 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKINYDCTVRDADGSII 1061

Query: 3171 QFFYGEDGVDVHKTSFLSKFKTLAVNQKVVQERLTDQCEKGKFINSNDYIKELPEALEKS 3350
            QF YGEDGVDVH++SF+ KFK LA+NQ +V +R    C +     +N YI +LP +L+  
Sbjct: 1062 QFQYGEDGVDVHRSSFIEKFKELAINQDMVLQR----CSEDMLSGANSYISDLPISLKNG 1117

Query: 3351 TKDFINKLSVKHHSSRLSRKPKGIXXXXXXXXXXXXAEPGEPVGVIAAQSIGEPSTQMTL 3530
             + F+  + +    +    + + +            A+PGEPVGV+AAQS+GEPSTQMTL
Sbjct: 1118 AEKFVEAMPMNERIASKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTL 1177

Query: 3531 NTFHHAGQGGEVNVTLGIPRLQEILMRASENIQTPVMTCPLWKGKTRDDADRLAAKLMKV 3710
            NTFH AG+ GE+NVTLGIPRLQEILM A+ +I+TP+MTCPL KGKT++DA+ +  KL K+
Sbjct: 1178 NTFHLAGR-GEMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITGKLRKI 1236

Query: 3711 SVADLVESMEVCVVPFSVHKNQACTLYKLKMKLYSPELYPRFSDISLEDCEKTLTILFVD 3890
            +VAD+++SM++ VVP++V+KN+ C+++KLK+ LY PE YP+ +DI+ +D E+T+T++F+ 
Sbjct: 1237 TVADIIKSMDLSVVPYTVYKNEVCSIHKLKINLYKPEHYPKHTDITEKDWEETMTVVFLR 1296

Query: 3891 ELEKAIRAHLLMLSKIGGIKNIVQRSESDEGEETDNDD--PGSKHKQXXXXXXXXXXXXX 4064
            +LE AI  H+ ML +I GI N       + G ETDNDD   G ++K              
Sbjct: 1297 KLEDAIEIHMKMLHRIRGICN---DKGPEAGNETDNDDSVSGKQNKD-------DGDDDG 1346

Query: 4065 XXXXXXXLGVDAQKRKQQVKXXXXXXXXXXXXISTDGENIEGEPSAGSESEVDQVDAEVD 4244
                   LG DAQK+K+QV                + E+   EPS+ S  E  ++D+E +
Sbjct: 1347 EGTEVDDLGSDAQKQKKQV--------TDEMDYEENSEDETNEPSSISGVEDPEMDSENE 1398

Query: 4245 NYIDGEVQIFDAEDESRQRSVSNPKSTEK----------KHKSEVKRKPTRAAKSGDRSV 4394
               D EV   D  +   +  VS  ++ E           K +S+ KR+    A S DR +
Sbjct: 1399 ---DAEVSKEDTPEPQEEADVSKEETMEPQKEVKAVKNVKEQSKKKRRKFVGATS-DRHI 1454

Query: 4395 FVEAKGLDFEVHLRF-TDEPYILLSEIAQKAAKNVYIKRAGNINQCSVI----------- 4538
            FV  +G  FEVH +F TD+P+ILL++IAQK A+ VYI+ +G I +C+V            
Sbjct: 1455 FVRGEGEKFEVHFQFATDDPHILLAQIAQKTAQKVYIQDSGKIERCTVANCGDPQVIYHG 1514

Query: 4539 ------------EKDKEYQLQTAGVNFQAFWKMQEDLDINHISSNDIHAVFQTYGVEAAR 4682
                        EK     L  +GV+F A W+ Q+ LD+ ++ SN IH +   +GVEAAR
Sbjct: 1515 DNPKERREISNDEKKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNVFGVEAAR 1574

Query: 4683 ATLIKQVRAVFEDHGISVNIRHLSLIADFMTQQGRYRPMSR-HGMAVSTSPFSKMSYETA 4859
             T+I+++  VF+ +GISV+IRHL+LIAD+MT  G YRPMSR  G+A STSPF +M++ETA
Sbjct: 1575 ETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETA 1634

Query: 4860 ADFIIEAAYHGEVDYLESPSARICLGLPVKMGTGSFDLMQKVQ 4988
              FI++AA +GE D LE+PSARICLGLP   GTG FDLMQ+V+
Sbjct: 1635 TKFIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRVE 1677