BLASTX nr result

ID: Sinomenium21_contig00003409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00003409
         (2421 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282872.1| PREDICTED: uncharacterized protein LOC100252...   126   5e-26
ref|XP_002308699.2| hypothetical protein POPTR_0006s27850g [Popu...    87   4e-14
ref|XP_002324321.1| hypothetical protein POPTR_0018s02380g [Popu...    78   2e-11

>ref|XP_002282872.1| PREDICTED: uncharacterized protein LOC100252509 [Vitis vinifera]
           gi|296082075|emb|CBI21080.3| unnamed protein product
           [Vitis vinifera]
          Length = 614

 Score =  126 bits (316), Expect = 5e-26
 Identities = 89/248 (35%), Positives = 125/248 (50%), Gaps = 14/248 (5%)
 Frame = +1

Query: 13  QVQTLHCLYNIQKSAMQEIRQEIYSQAQVLAFDSHTISDRSCKLHTFIVEGKPLRPGYV- 189
           QVQ LH LY+IQKSAMQE +++IYSQAQ LAF S  ++    ++   ++EGKPLR  YV 
Sbjct: 18  QVQALHKLYSIQKSAMQERQKQIYSQAQFLAFSSEKLAFADGQISGSVLEGKPLRSAYVP 77

Query: 190 APQNHVESNVLSQDASCAVKGLTSSSLKTSIWMNDVDAKILPSVQSKPRREIDLERPPED 369
              +  ES  LS     A+ G        S+W +    K   + QSKP R  DLER PED
Sbjct: 78  VAADKEESLALSLQPFSAMNGFKGCG---SLWTDSRGLKTSHTAQSKPIRNFDLERLPED 134

Query: 370 YMDDIEIQAVANCHQALDANTCLTEEALKKYTD------------DCPNLMQTDQITLMS 513
           YMD+ EIQ V+ C     AN+ L++    K  +            D P+  Q    + + 
Sbjct: 135 YMDESEIQVVSKCSDMPGANSILSKRTPYKDENSFLGAKISFSQVDSPSSKQMQGESDLR 194

Query: 514 AHPEPSQGIYQNCERSTESKILEALACNSTTGNQNLHKAT-KNHSKEFNCNHLPAVGHPP 690
               P + I Q+C+ S+E K+         T  QNL+  T    S++F   + P VG+  
Sbjct: 195 ILLVPRKEINQDCDGSSEGKVDSTNIKKYATVLQNLNNTTHSTTSQDFPLKYTPGVGNFH 254

Query: 691 IYEESKPS 714
             ++S PS
Sbjct: 255 ACQDSSPS 262


>ref|XP_002308699.2| hypothetical protein POPTR_0006s27850g [Populus trichocarpa]
           gi|550337226|gb|EEE92222.2| hypothetical protein
           POPTR_0006s27850g [Populus trichocarpa]
          Length = 450

 Score = 87.0 bits (214), Expect = 4e-14
 Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
 Frame = +1

Query: 13  QVQTLHCLYNIQKSAMQEIRQEIYSQAQVLAFDSHTISDRSCKLHTFIVEGKPLRPG-YV 189
           QVQ LH LYNIQK+AMQE R+  YSQAQV AF   ++     +    ++EGKPLRP  Y+
Sbjct: 18  QVQALHRLYNIQKAAMQETRRRNYSQAQVFAFSPESLVLVDGQFCGSVLEGKPLRPPVYI 77

Query: 190 APQNHVESNV-LSQDASCAVKGLTSSSLKTSIWMNDVDAKILPSVQSKPRREIDLERPPE 366
           A + H +  + LS    C +K +  S    S+W++ + A+      SKP R  DLE+ PE
Sbjct: 78  AGRAHKQDALGLSLSPFCTLKEIKGSG---SLWIDGMGAETFLPAHSKPLRNFDLEKLPE 134

Query: 367 DYMDD 381
           D  D+
Sbjct: 135 DDADE 139


>ref|XP_002324321.1| hypothetical protein POPTR_0018s02380g [Populus trichocarpa]
           gi|222865755|gb|EEF02886.1| hypothetical protein
           POPTR_0018s02380g [Populus trichocarpa]
          Length = 446

 Score = 78.2 bits (191), Expect = 2e-11
 Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
 Frame = +1

Query: 10  LQVQTLHCLYNIQKSAMQEIRQEIYSQAQVLAFDSHTISDRSCKLHTFIVEGKPLRPGYV 189
           + VQ LH LYNIQK+AMQEIR   YSQA+VLAF+  ++     +    ++E KP RP + 
Sbjct: 32  VHVQALHKLYNIQKAAMQEIRGRNYSQARVLAFNPESLVLVESQHCGSVLERKPSRPVFT 91

Query: 190 APQN-HVESNVLSQDASCAVKGLTSSSLKTSIWMNDVDAKILPSVQSKPRREIDLERPPE 366
           A +    +   LS    C  K    S     +W++ +     P    KP R+ DLE+ PE
Sbjct: 92  AGRGLKKDPLALSLRPFCTFKENKGSGF---LWIDGIGDGTSPPAHRKPVRDFDLEKVPE 148

Query: 367 DYMDD-IEIQAVANCHQALDANTCLTEEALKKYTDDCPNLMQTDQITLMSAHPEPSQGIY 543
           D  D+  +++ +    Q   +N   + E  + +       + + +  L ++H +      
Sbjct: 149 DEADESADLEGIPK--QWKGSNLPESTELFQDFGSSGEVALTSPKSELHNSHDDDVDSFP 206

Query: 544 QN-CERSTESKILEALACNSTTGNQNLHKATKNHSKEFNCNHLPAV 678
           ++  + S +S ILE    +     +++H  T ++  + N N LPAV
Sbjct: 207 KDPVKCSQDSSILEPKQLDEFNIQRSIHLETNSNLAQKNLN-LPAV 251


Top