BLASTX nr result
ID: Sinomenium21_contig00002698
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00002698 (1576 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 101 1e-18 emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] 101 1e-18 ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 95 8e-17 ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 91 2e-15 ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 91 2e-15 ref|XP_002315647.1| RNA recognition motif-containing family prot... 91 2e-15 ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 89 4e-15 ref|XP_002312652.1| RNA recognition motif-containing family prot... 89 5e-15 ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 87 3e-14 ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 86 5e-14 ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 85 8e-14 ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 85 8e-14 ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 84 2e-13 ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 84 2e-13 ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 84 2e-13 ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 84 2e-13 gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 82 9e-13 ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A... 80 3e-12 gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 79 4e-12 ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 78 1e-11 >ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED: uncharacterized protein LOC100268141 isoform 2 [Vitis vinifera] Length = 647 Score = 101 bits (251), Expect = 1e-18 Identities = 51/84 (60%), Positives = 57/84 (67%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXXXXX 1396 SGNSER+HRDEREQDW+RSDKD RYREEKDGYR+HRQRE + Sbjct: 561 SGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSR 620 Query: 1395 XXSMMQEDDHRSRSRDLDYGKRRR 1324 ++ E DHRSRSRD DYGKRRR Sbjct: 621 SRAVADE-DHRSRSRDGDYGKRRR 643 >emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] Length = 168 Score = 101 bits (251), Expect = 1e-18 Identities = 51/84 (60%), Positives = 57/84 (67%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXXXXX 1396 SGNSER+HRDEREQDW+RSDKD RYREEKDGYR+HRQRE + Sbjct: 82 SGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSR 141 Query: 1395 XXSMMQEDDHRSRSRDLDYGKRRR 1324 ++ E DHRSRSRD DYGKRRR Sbjct: 142 SRAVADE-DHRSRSRDGDYGKRRR 164 >ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica] gi|462422613|gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica] Length = 630 Score = 95.1 bits (235), Expect = 8e-17 Identities = 50/88 (56%), Positives = 58/88 (65%), Gaps = 4/88 (4%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD----KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXX 1408 SGNSER+HRDEREQDWDRS+ ++ RY+EEKD YR+HRQRE Q+ Sbjct: 540 SGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRE-RDVGYEDDWDRGQSSS 598 Query: 1407 XXXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 M EDDHRSRSRD+DYGKRRR Sbjct: 599 RPRSRSKAMPEDDHRSRSRDVDYGKRRR 626 >ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa] gi|550329195|gb|ERP56065.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa] Length = 591 Score = 90.5 bits (223), Expect = 2e-15 Identities = 45/84 (53%), Positives = 55/84 (65%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXXXXX 1396 SGNS+R+HRDEREQDWDRS+++ +YREEKD YR HRQRE + Sbjct: 505 SGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRE-RDSGYEDDRDRGHSSSRARS 563 Query: 1395 XXSMMQEDDHRSRSRDLDYGKRRR 1324 E+D+RSRSRD+DYGKRRR Sbjct: 564 RSRAAPEEDYRSRSRDVDYGKRRR 587 >ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca subsp. vesca] Length = 646 Score = 90.5 bits (223), Expect = 2e-15 Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDR---RYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 +G SER+HRDEREQDWDRS+++ RY+EEKD YR+HR+RE + Sbjct: 557 TGTSERRHRDEREQDWDRSEREHREPRYKEEKDSYRDHRRRE-RDVAYEDDRDRGHSSSR 615 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 M EDDHRSRSRD+DYGKRRR Sbjct: 616 PRSRSKAMPEDDHRSRSRDVDYGKRRR 642 >ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1| RNA recognition motif-containing family protein [Populus trichocarpa] Length = 573 Score = 90.5 bits (223), Expect = 2e-15 Identities = 45/84 (53%), Positives = 55/84 (65%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXXXXX 1396 SGNS+R+HRDEREQDWDRS+++ +YREEKD YR HRQRE + Sbjct: 487 SGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRE-RDSGYEDDRDRGHSSSRARS 545 Query: 1395 XXSMMQEDDHRSRSRDLDYGKRRR 1324 E+D+RSRSRD+DYGKRRR Sbjct: 546 RSRAAPEEDYRSRSRDVDYGKRRR 569 >ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695496|ref|XP_007044905.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695500|ref|XP_007044906.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708839|gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708841|gb|EOY00738.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 652 Score = 89.4 bits (220), Expect = 4e-15 Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGNS+R+HRDE+EQDWDRS+ ++ RYREEKD YREHR RE Q+ Sbjct: 563 SGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRE-RDLDYDDDWDRGQSSSR 621 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 M E++HRSRSRD+DYGK+RR Sbjct: 622 SRRRSHAMPEEEHRSRSRDVDYGKKRR 648 >ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition motif-containing family protein [Populus trichocarpa] Length = 619 Score = 89.0 bits (219), Expect = 5e-15 Identities = 43/84 (51%), Positives = 54/84 (64%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXXXXX 1396 SGNS+R+HRDEREQDWDR +++ RY+EEKD YR HRQRE + Sbjct: 533 SGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQRE-RDSGYEDDRDRGHSSSRARS 591 Query: 1395 XXSMMQEDDHRSRSRDLDYGKRRR 1324 E+D+RSR+RD+DYGKRRR Sbjct: 592 RSRAAPEEDYRSRTRDVDYGKRRR 615 >ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1 [Solanum tuberosum] gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X2 [Solanum tuberosum] Length = 648 Score = 86.7 bits (213), Expect = 3e-14 Identities = 44/84 (52%), Positives = 55/84 (65%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXXXXX 1396 SGNS+++HRDERE D DR DK+ RYREE+DGYR++RQ+E Q+ Sbjct: 562 SGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQKE-RESEYEEDYDRGQSSSRSRS 620 Query: 1395 XXSMMQEDDHRSRSRDLDYGKRRR 1324 QE+DHRSRSRD +YGKRRR Sbjct: 621 KSRAAQEEDHRSRSRDTNYGKRRR 644 >ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis] gi|223546091|gb|EEF47594.1| RNA binding protein, putative [Ricinus communis] Length = 644 Score = 85.9 bits (211), Expect = 5e-14 Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGNS+R+HRD+RE DWDRS+ K+ RYREEK+ YR+HRQRE Q+ Sbjct: 555 SGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDHRQRE-RDSGYEDDWDRGQSSSR 613 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 + E+D+RSRSRD DYGKRRR Sbjct: 614 SRSRSRAVPEEDYRSRSRDADYGKRRR 640 >ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao] gi|508708842|gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma cacao] Length = 697 Score = 85.1 bits (209), Expect = 8e-14 Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGNS+R+HRDE+E+DWDRS+ ++ RYREEKD YREHR RE Q+ Sbjct: 608 SGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRE-RDLDYDDDLDRGQSSSR 666 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 M E+ RSRSRD+DYGKRRR Sbjct: 667 SRRRSHAMPEEQRRSRSRDVDYGKRRR 693 Score = 70.1 bits (170), Expect = 3e-09 Identities = 39/92 (42%), Positives = 48/92 (52%), Gaps = 13/92 (14%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGNS+R+HRDE+EQDWDRS+ ++ RYREEKD YREHR RE + Sbjct: 563 SGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHREREWSGNSDRRHRDEKERD 622 Query: 1404 XXXXXSMMQED----------DHRSRSRDLDY 1339 +E +HR R RDLDY Sbjct: 623 WDRSEREHREHRYREEKDSYREHRHRERDLDY 654 >ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695488|ref|XP_007044903.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708837|gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 653 Score = 85.1 bits (209), Expect = 8e-14 Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGNS+R+HRDE+E+DWDRS+ ++ RYREEKD YREHR RE Q+ Sbjct: 564 SGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRE-RDLDYDDDLDRGQSSSR 622 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 M E+ RSRSRD+DYGKRRR Sbjct: 623 SRRRSHAMPEEQRRSRSRDVDYGKRRR 649 >ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1 [Citrus sinensis] Length = 655 Score = 84.0 bits (206), Expect = 2e-13 Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGN++R+HR+EREQDWDRS+ +D R+REEKD YR+ RQR+ Q+ Sbjct: 566 SGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRD-RDSTYDDNWDRGQSSSR 624 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 + ++DHRSRSRD+DYGKRRR Sbjct: 625 SRSRSGAIPDEDHRSRSRDVDYGKRRR 651 >ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1 [Citrus sinensis] Length = 658 Score = 84.0 bits (206), Expect = 2e-13 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGN++R+HR+EREQDWDRS+ +D R+REEKD YR+ RQR+ + Sbjct: 569 SGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRD-RDSTYDDNWDRGPSSSR 627 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 + ++DHRSRSRD+DYGKRRR Sbjct: 628 SRSRSRAIPDEDHRSRSRDVDYGKRRR 654 >ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina] gi|567891321|ref|XP_006438181.1| hypothetical protein CICLE_v10030917mg [Citrus clementina] gi|557540376|gb|ESR51420.1| hypothetical protein CICLE_v10030917mg [Citrus clementina] gi|557540377|gb|ESR51421.1| hypothetical protein CICLE_v10030917mg [Citrus clementina] Length = 655 Score = 84.0 bits (206), Expect = 2e-13 Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGN++R+HR+EREQDWDRS+ +D R+REEKD YR+ RQR+ Q+ Sbjct: 566 SGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRD-RDSTYDDNWDRGQSSSR 624 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 + ++DHRSRSRD+DYGKRRR Sbjct: 625 SRSRSGAIPDEDHRSRSRDVDYGKRRR 651 >ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina] gi|557540375|gb|ESR51419.1| hypothetical protein CICLE_v10030915mg [Citrus clementina] Length = 658 Score = 84.0 bits (206), Expect = 2e-13 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGN++R+HR+EREQDWDRS+ +D R+REEKD YR+ RQR+ + Sbjct: 569 SGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRD-RDSTYDDNWDRGPSSSR 627 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 + ++DHRSRSRD+DYGKRRR Sbjct: 628 SRSRSRAIPDEDHRSRSRDVDYGKRRR 654 >gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus] Length = 639 Score = 81.6 bits (200), Expect = 9e-13 Identities = 41/80 (51%), Positives = 50/80 (62%) Frame = -2 Query: 1563 ERKHRDEREQDWDRSDKDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXXXXXXXSM 1384 ERKHR+ERE D +R+D+D +YREEKD YREHR +E + Sbjct: 558 ERKHREERENDGERNDRDSKYREEKDRYREHRHKERESGYDDDWDRGQSS--RSRSRSGA 615 Query: 1383 MQEDDHRSRSRDLDYGKRRR 1324 +QE+DHRSRSRD DYGKRRR Sbjct: 616 VQEEDHRSRSRDADYGKRRR 635 >ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda] gi|548855834|gb|ERN13697.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda] Length = 659 Score = 80.1 bits (196), Expect = 3e-12 Identities = 41/84 (48%), Positives = 51/84 (60%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXXXXX 1396 S ER+HRD+R+ DWDR D RY++EKDGY +HRQRE + Sbjct: 576 SSGPERRHRDDRDSDWDR---DPRYKDEKDGYSDHRQRERDWDNEDDWDRGRTSSRSRSK 632 Query: 1395 XXSMMQEDDHRSRSRDLDYGKRRR 1324 MMQE+D RSRS+D+DYGKRRR Sbjct: 633 SR-MMQEEDQRSRSKDVDYGKRRR 655 >gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus notabilis] Length = 636 Score = 79.3 bits (194), Expect = 4e-12 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 3/87 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSDKDR---RYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGNSER++ +ER+QDWDRS K++ RYRE KDG R++R +E Q+ Sbjct: 547 SGNSERRNHEERDQDWDRSQKEQKEHRYREGKDGSRDYRPKE-RELDYEDDWDRGQSSSR 605 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRRR 1324 ++QED HRSRSRD+DYGKRRR Sbjct: 606 LRSRSRVVQEDHHRSRSRDVDYGKRRR 632 >ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao] gi|508708843|gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Theobroma cacao] Length = 656 Score = 78.2 bits (191), Expect = 1e-11 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 3/86 (3%) Frame = -2 Query: 1575 SGNSERKHRDEREQDWDRSD---KDRRYREEKDGYREHRQREXXXXXXXXXXXXXQAXXX 1405 SGNS+R+HRDE+EQDWDRS+ ++ RYREEKD YREHR RE Q+ Sbjct: 563 SGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRE-RDLDYDDDWDRGQSSSR 621 Query: 1404 XXXXXSMMQEDDHRSRSRDLDYGKRR 1327 M E++HRSRSRD+ Y + + Sbjct: 622 SRRRSHAMPEEEHRSRSRDVGYREEK 647