BLASTX nr result
ID: Sinomenium21_contig00002477
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00002477
(244 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containi... 145 6e-33
ref|XP_007227203.1| hypothetical protein PRUPE_ppa019251mg [Prun... 145 7e-33
gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis] 140 2e-31
ref|XP_007152607.1| hypothetical protein PHAVU_004G144300g [Phas... 139 5e-31
ref|XP_002301973.2| pentatricopeptide repeat-containing family p... 137 1e-30
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi... 135 8e-30
ref|XP_007017888.1| Pentatricopeptide repeat (PPR) superfamily p... 134 1e-29
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera] 133 2e-29
ref|XP_006587447.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28
ref|XP_006416418.1| hypothetical protein EUTSA_v10009574mg [Eutr... 124 1e-26
ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containi... 124 2e-26
ref|XP_002890375.1| pentatricopeptide repeat-containing protein ... 123 3e-26
ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containi... 122 4e-26
gb|AAF79892.1|AC022472_1 Contains similarity to an unknown prote... 122 5e-26
ref|NP_173449.1| pentatricopeptide repeat-containing protein [Ar... 122 5e-26
ref|XP_006306841.1| hypothetical protein CARUB_v10008385mg [Caps... 120 1e-25
gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea] 120 2e-25
gb|EYU34907.1| hypothetical protein MIMGU_mgv1a0030962mg, partia... 120 3e-25
gb|EYU24286.1| hypothetical protein MIMGU_mgv1a025107mg [Mimulus... 120 3e-25
>ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Fragaria vesca subsp. vesca]
Length = 755
Score = 145 bits (366), Expect = 6e-33
Identities = 65/81 (80%), Positives = 75/81 (92%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD ISFTCVLSACSQ+GL ++GW YFNSM++EH IEAR+EHYACM+TLL RAG+LDEAY+
Sbjct: 482 PDIISFTCVLSACSQNGLTEEGWYYFNSMSKEHGIEARIEHYACMVTLLGRAGKLDEAYS 541
Query: 182 MIKEMPSEPDACVWGALLSSC 244
MIK+MP EPDACVWGALLSSC
Sbjct: 542 MIKKMPFEPDACVWGALLSSC 562
>ref|XP_007227203.1| hypothetical protein PRUPE_ppa019251mg [Prunus persica]
gi|462424139|gb|EMJ28402.1| hypothetical protein
PRUPE_ppa019251mg [Prunus persica]
Length = 654
Score = 145 bits (365), Expect = 7e-33
Identities = 64/81 (79%), Positives = 75/81 (92%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISFTCVLSACSQ GL +GW YFNSM++EH +EAR+EHYACM+TLLSR+G+L+EAY+
Sbjct: 381 PDFISFTCVLSACSQKGLTDEGWYYFNSMSKEHGLEARVEHYACMVTLLSRSGKLEEAYS 440
Query: 182 MIKEMPSEPDACVWGALLSSC 244
MIK+MP EPDACVWGALLSSC
Sbjct: 441 MIKQMPFEPDACVWGALLSSC 461
>gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis]
Length = 728
Score = 140 bits (352), Expect = 2e-31
Identities = 60/81 (74%), Positives = 75/81 (92%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISFTCVLSACSQ+GL +GW+YF+SM++EH IEAR+EHYACM+TLL R+G+L+EAY+
Sbjct: 455 PDFISFTCVLSACSQNGLTDEGWHYFSSMSKEHGIEARLEHYACMVTLLGRSGKLEEAYS 514
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+I +MP EPDACVWG+LLSSC
Sbjct: 515 LINKMPMEPDACVWGSLLSSC 535
>ref|XP_007152607.1| hypothetical protein PHAVU_004G144300g [Phaseolus vulgaris]
gi|561025916|gb|ESW24601.1| hypothetical protein
PHAVU_004G144300g [Phaseolus vulgaris]
Length = 601
Score = 139 bits (349), Expect = 5e-31
Identities = 59/81 (72%), Positives = 75/81 (92%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD I+FTC+LSAC+Q+GL ++GW+Y+NSM++EH IE +MEHYACM+TLLSR G+L+EAY+
Sbjct: 328 PDSITFTCILSACAQNGLTEEGWHYYNSMSKEHGIEPKMEHYACMVTLLSRVGKLEEAYS 387
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+IKEMP EPDACVWGALLSSC
Sbjct: 388 IIKEMPFEPDACVWGALLSSC 408
>ref|XP_002301973.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344115|gb|EEE81246.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 724
Score = 137 bits (346), Expect = 1e-30
Identities = 59/81 (72%), Positives = 73/81 (90%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD +SFTCVLSAC+Q GL ++GW YF+SM++ H +EARMEHY+CM+TLL R+GRL+EAYA
Sbjct: 451 PDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYA 510
Query: 182 MIKEMPSEPDACVWGALLSSC 244
MIK+MP EPD+CVWGALLSSC
Sbjct: 511 MIKQMPFEPDSCVWGALLSSC 531
>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like isoform X1 [Glycine max]
Length = 748
Score = 135 bits (339), Expect = 8e-30
Identities = 57/81 (70%), Positives = 73/81 (90%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD ++FTCVLSAC+Q+GL ++GW +NSM++EH IE +MEHYAC++TLLSR G+L+EAY+
Sbjct: 475 PDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYS 534
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+IKEMP EPDACVWGALLSSC
Sbjct: 535 IIKEMPFEPDACVWGALLSSC 555
>ref|XP_007017888.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508723216|gb|EOY15113.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 758
Score = 134 bits (338), Expect = 1e-29
Identities = 55/81 (67%), Positives = 75/81 (92%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISF+CVLSACSQ GL ++GW++FNSM+++H ++A+MEHY+CM+ LL R+G+L++AYA
Sbjct: 485 PDFISFSCVLSACSQGGLTEEGWHFFNSMSRDHGVKAKMEHYSCMVNLLGRSGKLEQAYA 544
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+I++MP EPDACVWGALLSSC
Sbjct: 545 LIQQMPFEPDACVWGALLSSC 565
>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 133 bits (335), Expect = 2e-29
Identities = 61/81 (75%), Positives = 72/81 (88%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD ISFTCVLSACSQSGL ++G YFNSM+ ++ IEAR+EHYACM+TLLSRAG+L++AYA
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 182 MIKEMPSEPDACVWGALLSSC 244
MI+ MP PDACVWGALLSSC
Sbjct: 545 MIRRMPVNPDACVWGALLSSC 565
>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 133 bits (335), Expect = 2e-29
Identities = 61/81 (75%), Positives = 72/81 (88%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD ISFTCVLSACSQSGL ++G YFNSM+ ++ IEAR+EHYACM+TLLSRAG+L++AYA
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 182 MIKEMPSEPDACVWGALLSSC 244
MI+ MP PDACVWGALLSSC
Sbjct: 545 MIRRMPVNPDACVWGALLSSC 565
>ref|XP_006587447.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 601
Score = 130 bits (328), Expect = 1e-28
Identities = 56/81 (69%), Positives = 72/81 (88%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
P+ ++FTCVLSAC+Q+GL ++GW Y+NSM++EH E +MEHYACM+TLLSR G+L+EAY+
Sbjct: 328 PNLVTFTCVLSACAQNGLTEEGWRYYNSMSEEHGFEPKMEHYACMVTLLSRVGKLEEAYS 387
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+IKEMP EPDACV GALLSSC
Sbjct: 388 IIKEMPFEPDACVRGALLSSC 408
>ref|XP_006416418.1| hypothetical protein EUTSA_v10009574mg [Eutrema salsugineum]
gi|557094189|gb|ESQ34771.1| hypothetical protein
EUTSA_v10009574mg [Eutrema salsugineum]
Length = 760
Score = 124 bits (311), Expect = 1e-26
Identities = 54/81 (66%), Positives = 68/81 (83%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISFT +LSACSQ GL +GW YF MT+E+ I+ R+EHY+CM++LL RAG+L EAY
Sbjct: 487 PDFISFTSLLSACSQVGLTDEGWKYFGMMTEEYGIKPRLEHYSCMVSLLGRAGKLQEAYD 546
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+IKE+P EPD+CVWGALL+SC
Sbjct: 547 LIKEIPFEPDSCVWGALLNSC 567
>ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 124 bits (310), Expect = 2e-26
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD ++FTCVL ACSQ+GL ++G YFN M Q H I RMEHYACM+TLL R+G+LDEAY
Sbjct: 388 PDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYD 447
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+I EMP EPD+C+WG+LL SC
Sbjct: 448 LINEMPFEPDSCIWGSLLGSC 468
>ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336217|gb|EFH66634.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 760
Score = 123 bits (308), Expect = 3e-26
Identities = 53/81 (65%), Positives = 67/81 (82%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISFT +LSAC Q GL +GW YFN M++E+ I+ R+EHY+CM+ LL RAG+L EAY
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+IKE+P EPD+CVWGALL+SC
Sbjct: 547 LIKEIPFEPDSCVWGALLNSC 567
>ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Solanum lycopersicum]
Length = 828
Score = 122 bits (307), Expect = 4e-26
Identities = 56/81 (69%), Positives = 68/81 (83%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISFT VLSACSQ+GL ++G +YF+ M++ H +EAR+EHYACM++LL R G+L EAY
Sbjct: 555 PDFISFTSVLSACSQAGLTEQGQHYFDCMSRIHGLEARVEHYACMVSLLGRTGKLKEAYD 614
Query: 182 MIKEMPSEPDACVWGALLSSC 244
MI MP EPDACVWGALLSSC
Sbjct: 615 MISTMPIEPDACVWGALLSSC 635
>gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 122 bits (306), Expect = 5e-26
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISFT +LSAC Q GL +GW YF M++E+ I+ R+EHY+CM+ LL RAG+L EAY
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+IKEMP EPD+CVWGALL+SC
Sbjct: 547 LIKEMPFEPDSCVWGALLNSC 567
>ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g20230 gi|332191832|gb|AEE29953.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 122 bits (306), Expect = 5e-26
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISFT +LSAC Q GL +GW YF M++E+ I+ R+EHY+CM+ LL RAG+L EAY
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+IKEMP EPD+CVWGALL+SC
Sbjct: 547 LIKEMPFEPDSCVWGALLNSC 567
>ref|XP_006306841.1| hypothetical protein CARUB_v10008385mg [Capsella rubella]
gi|482575552|gb|EOA39739.1| hypothetical protein
CARUB_v10008385mg [Capsella rubella]
Length = 760
Score = 120 bits (302), Expect = 1e-25
Identities = 51/81 (62%), Positives = 67/81 (82%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PDFISFT +L++C Q GL +GW YF+ M++E+ I+ R+EHY+CM+ LL RAG+L EAY
Sbjct: 487 PDFISFTSLLASCGQVGLTDEGWKYFSMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYE 546
Query: 182 MIKEMPSEPDACVWGALLSSC 244
+IKEMP EPD+CVWGALL+SC
Sbjct: 547 LIKEMPFEPDSCVWGALLNSC 567
>gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]
Length = 1063
Score = 120 bits (301), Expect = 2e-25
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD +SFT +LSACSQSGL ++G YF SM ++H +E R+EHYAC++ LL RAG+LDEAYA
Sbjct: 788 PDSVSFTSLLSACSQSGLAEEGRRYFESMFEDHGLEPRLEHYACIVGLLGRAGKLDEAYA 847
Query: 182 MIKEMPSEPDACVWGALLSSC 244
IK MP E DACVWGALLSSC
Sbjct: 848 KIKRMPFEADACVWGALLSSC 868
>gb|EYU34907.1| hypothetical protein MIMGU_mgv1a0030962mg, partial [Mimulus
guttatus]
Length = 476
Score = 120 bits (300), Expect = 3e-25
Identities = 53/81 (65%), Positives = 69/81 (85%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD +S T +LSACSQSGL ++G YF+ MT +H I+ R+EHYAC+++LL RAG+L+EAY+
Sbjct: 381 PDSVSLTSLLSACSQSGLTEEGHRYFDRMTTDHGIKPRVEHYACVVSLLGRAGKLEEAYS 440
Query: 182 MIKEMPSEPDACVWGALLSSC 244
MI++MP EPDACVWGALLSSC
Sbjct: 441 MIEKMPFEPDACVWGALLSSC 461
>gb|EYU24286.1| hypothetical protein MIMGU_mgv1a025107mg [Mimulus guttatus]
Length = 654
Score = 120 bits (300), Expect = 3e-25
Identities = 53/81 (65%), Positives = 69/81 (85%)
Frame = +2
Query: 2 PDFISFTCVLSACSQSGLMKKGWNYFNSMTQEHQIEARMEHYACMITLLSRAGRLDEAYA 181
PD +S T +LSACSQSGL ++G YF+ MT +H I+ R+EHYAC+++LL RAG+L+EAY+
Sbjct: 381 PDSVSLTSLLSACSQSGLTEEGHRYFDRMTTDHGIKPRVEHYACVVSLLGRAGKLEEAYS 440
Query: 182 MIKEMPSEPDACVWGALLSSC 244
MI++MP EPDACVWGALLSSC
Sbjct: 441 MIEKMPFEPDACVWGALLSSC 461