BLASTX nr result
ID: Sinomenium21_contig00002105
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00002105
(1336 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284465.1| PREDICTED: general transcription factor IIH ... 387 e-105
ref|XP_002307429.2| basal transcription factor complex subunit-r... 383 e-103
ref|XP_007019036.1| Basal transcription factor complex subunit-r... 377 e-102
ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prun... 365 2e-98
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ... 362 3e-97
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ... 362 3e-97
ref|XP_004152842.1| PREDICTED: general transcription factor IIH ... 360 8e-97
ref|XP_006472762.1| PREDICTED: general transcription factor IIH ... 360 1e-96
ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutr... 354 4e-95
ref|NP_564050.1| basal transcription factor complex subunit-rela... 350 1e-93
ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arab... 349 2e-93
ref|XP_006472763.1| PREDICTED: general transcription factor IIH ... 343 7e-92
ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Caps... 342 2e-91
gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Mimulus... 342 3e-91
ref|XP_004500559.1| PREDICTED: general transcription factor IIH ... 337 7e-90
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ... 336 1e-89
ref|XP_004241513.1| PREDICTED: general transcription factor IIH ... 336 1e-89
ref|XP_007137405.1| hypothetical protein PHAVU_009G124300g [Phas... 329 1e-87
ref|XP_003523449.1| PREDICTED: general transcription factor IIH ... 325 3e-86
ref|NP_001045748.1| Os02g0125800 [Oryza sativa Japonica Group] g... 318 3e-84
>ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis
vinifera] gi|302141830|emb|CBI19033.3| unnamed protein
product [Vitis vinifera]
Length = 297
Score = 387 bits (994), Expect = e-105
Identities = 200/304 (65%), Positives = 217/304 (71%), Gaps = 2/304 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MA VPSKLY+ NPFFW +T S+ F++FL+H
Sbjct: 1 MAPVPSKLYSDDVSLLVVLLDTNPFFW-------STASLPFSKFLSHVLAFLNSILLINQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEKXX 367
ATG NSC++I+DSS+ A ENGRMPA S +LQKLEEFV DE+L K
Sbjct: 54 LNQVVVIATGCNSCNFIFDSSSVPAN-PNLENGRMPALCSNLLQKLEEFVTGDEKLSKEV 112
Query: 368 XXXXXXXXXXXXXXXX--CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFR+G LHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ
Sbjct: 113 LAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 172
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQ LDGLFQYLST+FATDLHSR FLQLP
Sbjct: 173 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQLP 232
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
KP GVDFRASCFCHK TIDMGYICSVCLSIFCKHHKKCSTCGSVFGQA + + TDRK
Sbjct: 233 KPAGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRKR 292
Query: 902 KSPE 913
K+PE
Sbjct: 293 KTPE 296
>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
[Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
transcription factor complex subunit-related family
protein [Populus trichocarpa]
Length = 298
Score = 383 bits (983), Expect = e-103
Identities = 192/304 (63%), Positives = 224/304 (73%), Gaps = 2/304 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M SVPSKLY+ NPFFW +S+SF++FL+H
Sbjct: 1 MTSVPSKLYSDDVSLVVVLLDTNPFFW------TPPSSLSFSQFLSHVLAFVNSILLLNQ 54
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL--EK 361
A+G N+CDYIYDSS+ ++++ GSE+GRMP+ YS +LQKLEEF+I DE+L E+
Sbjct: 55 LNQVVVIASGYNTCDYIYDSSSDASQL-GSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQ 113
Query: 362 XXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ
Sbjct: 114 SQRAIKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 173
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSC +GA +SAFLQQASYITGGVY+KPQ LDGLFQYL+T+FATDLHSR+F+QLP
Sbjct: 174 RSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLP 233
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
+P GVDFRASCFCHK TIDMGYICSVCLSIFC HHKKCSTCGSVFGQA + ++T+D K
Sbjct: 234 RPAGVDFRASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTSDLKR 293
Query: 902 KSPE 913
K+PE
Sbjct: 294 KAPE 297
>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
[Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
transcription factor complex subunit-related isoform 1
[Theobroma cacao]
Length = 296
Score = 377 bits (969), Expect = e-102
Identities = 196/304 (64%), Positives = 216/304 (71%), Gaps = 2/304 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MAS PSKLYA NPFFW S S+SF++FL+H
Sbjct: 1 MASAPSKLYADDVSLVVVLVDTNPFFWSAS-------SLSFSQFLSHVLAFLNAILTLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEKXX 367
ATG NSC+YI+DSS S + ENGRMP S +LQKLEEF+I DE+L K
Sbjct: 54 LNQVVVIATGYNSCNYIFDSS--SDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEV 111
Query: 368 XXXXXXXXXXXXXXXX--CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFRSG+LHP PRILCLQGSPDGPEQYVA+MNAIFSAQ
Sbjct: 112 PEGRIKSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSAQ 171
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSC +GAQ+SAFLQQASYITGGV+ KPQ LDGLFQYL TIFATDLHSR+FL LP
Sbjct: 172 RSMVPIDSCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDLHSRSFLHLP 231
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
KPVGVDFRASCFCHK TIDMGYICSVCLSIFCKHHKKCSTCGSVFGQA E +T+D+K
Sbjct: 232 KPVGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASTSDKKR 291
Query: 902 KSPE 913
K+PE
Sbjct: 292 KTPE 295
>ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica]
gi|462420187|gb|EMJ24450.1| hypothetical protein
PRUPE_ppa009386mg [Prunus persica]
Length = 295
Score = 365 bits (938), Expect = 2e-98
Identities = 193/304 (63%), Positives = 215/304 (70%), Gaps = 2/304 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MAS PSKLYA NPFFW S S+ F+ FL+H
Sbjct: 1 MASAPSKLYADDVSLLMVLLDTNPFFWSSS-------SLPFSVFLSHVLTFLNSILLLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL--EK 361
ATG NSC YIYDSS ++ +GS+NGRMPA +LQKLEEFVI DE+L E
Sbjct: 54 LNQVVVIATGYNSCSYIYDSSTSTN--QGSDNGRMPARCVNLLQKLEEFVIEDEQLIKEG 111
Query: 362 XXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFRSG LHPQPRILCLQGS DGPEQYVA+MNAIFSAQ
Sbjct: 112 LREGIASSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQ 171
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RS VPIDSC +G+ +SAFLQQASYITGGVYLKPQ +GLFQYLST+FATDLHSR FLQLP
Sbjct: 172 RS-VPIDSCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQLP 230
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
K +GVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQA +V +T+++K
Sbjct: 231 KSLGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDVNSTSNKKR 290
Query: 902 KSPE 913
K+PE
Sbjct: 291 KTPE 294
>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
2 [Fragaria vesca subsp. vesca]
Length = 298
Score = 362 bits (928), Expect = 3e-97
Identities = 193/309 (62%), Positives = 214/309 (69%), Gaps = 2/309 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MASVPSKLYA NPFFW S S+ F+++L+H
Sbjct: 1 MASVPSKLYADDVSLLMVLLDTNPFFWSSS-------SLPFSKYLSHVLTFLNSILLLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL--EK 361
ATG +SC YIYDS ASA +GS+ GRMPA S +L+KLEEFV DE+L E
Sbjct: 54 LNQVVVIATGYSSCSYIYDS--ASAPGQGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEG 111
Query: 362 XXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQ+VFRSG HP PRILCLQGS DGPEQYVA+MNAIFSAQ
Sbjct: 112 SAEGIPSSLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQ 171
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSC +G+ +SAFLQQASYITGGVYLKPQ DGL QYL+T+FATDLHSR FLQLP
Sbjct: 172 RSMVPIDSCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLP 231
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
K GVDFRASCFCHKKTID GYICSVCLSIFCKHHKKCSTCGSVFGQA EV +TT++K
Sbjct: 232 KSAGVDFRASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKR 291
Query: 902 KSPEV*PLL 928
KS E PLL
Sbjct: 292 KSSE--PLL 298
>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
1 [Fragaria vesca subsp. vesca]
Length = 300
Score = 362 bits (928), Expect = 3e-97
Identities = 193/309 (62%), Positives = 214/309 (69%), Gaps = 2/309 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MASVPSKLYA NPFFW S S+ F+++L+H
Sbjct: 1 MASVPSKLYADDVSLLMVLLDTNPFFWSSS-------SLPFSKYLSHVLTFLNSILLLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL--EK 361
ATG +SC YIYDS ASA +GS+ GRMPA S +L+KLEEFV DE+L E
Sbjct: 54 LNQVVVIATGYSSCSYIYDS--ASAPGQGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEG 111
Query: 362 XXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQ+VFRSG HP PRILCLQGS DGPEQYVA+MNAIFSAQ
Sbjct: 112 SAEGIPSSLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQ 171
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSC +G+ +SAFLQQASYITGGVYLKPQ DGL QYL+T+FATDLHSR FLQLP
Sbjct: 172 RSMVPIDSCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLP 231
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
K GVDFRASCFCHKKTID GYICSVCLSIFCKHHKKCSTCGSVFGQA EV +TT++K
Sbjct: 232 KSAGVDFRASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKR 291
Query: 902 KSPEV*PLL 928
KS E PLL
Sbjct: 292 KSSE--PLL 298
>ref|XP_004152842.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
sativus]
Length = 295
Score = 360 bits (924), Expect = 8e-97
Identities = 185/304 (60%), Positives = 213/304 (70%), Gaps = 2/304 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MAS PSKLYA NPFFW +T+++ F++FL+H
Sbjct: 1 MASAPSKLYADDVSLLVVLLDTNPFFW-------STSALPFSKFLSHVLAFLNSILVLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL--EK 361
TG SC Y+Y+SS+ S G E+GRMPA +++L+ LEEFVI DE+ E
Sbjct: 54 LNEVVVIGTGYASCKYLYNSSSYSNH--GLEDGRMPALCTRLLKNLEEFVIGDEQSIKED 111
Query: 362 XXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQ+VFRSGSLHPQPRILCLQGSPDGPEQYVA+MNAIFSAQ
Sbjct: 112 PKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQ 171
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSC IG+ +SAFLQQASYITGGVYLKPQ +DGLFQYLST+F TDLHSR FLQLP
Sbjct: 172 RSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLP 231
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
K VGVDFRASCFCHKKTIDMGY+CSVCLSIFCKHHKKCSTCGSVFG+ E+ + + K
Sbjct: 232 KSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVFGETPVELDSVSKLKR 291
Query: 902 KSPE 913
K+PE
Sbjct: 292 KTPE 295
>ref|XP_006472762.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
X1 [Citrus sinensis]
Length = 298
Score = 360 bits (923), Expect = 1e-96
Identities = 190/306 (62%), Positives = 212/306 (69%), Gaps = 4/306 (1%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MAS PSKLY+ NPFFW S S+SF++FLTH
Sbjct: 1 MASAPSKLYSDDVSLVVVLLDTNPFFWSSS-------SLSFSQFLTHVLAFFNAILTLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEKXX 367
ATG NSCDY+YDSS+ + G NGRMP+ + +LQ LEEF+ DE+L K
Sbjct: 54 LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGKQE 111
Query: 368 XXXXXXXXXXXXXXXX--CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVA+MNAIFSAQ
Sbjct: 112 PEGRIACSLLSGSLSMALCYIQRVFRSGLLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQ 171
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSC +GAQ+SAFLQQASYITGGV+ KPQ LDGLFQYL TIF TDLHSRNFLQLP
Sbjct: 172 RSMVPIDSCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNFLQLP 231
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQA--NPEVTTTTDR 895
KPVGVDFRASCFCHK TIDMGYICSVCLSI+CKH KKCSTCGSVFGQA + + T+R
Sbjct: 232 KPVGVDFRASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPSATNR 291
Query: 896 KGKSPE 913
K K+ +
Sbjct: 292 KRKTTD 297
>ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutrema salsugineum]
gi|557094384|gb|ESQ34966.1| hypothetical protein
EUTSA_v10008316mg [Eutrema salsugineum]
Length = 300
Score = 354 bits (909), Expect = 4e-95
Identities = 186/307 (60%), Positives = 215/307 (70%), Gaps = 5/307 (1%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MASV SKLY+ NPFFW +TTSI F++FL+H
Sbjct: 1 MASVASKLYSDDVSLLVLLLDTNPFFW-------STTSIKFSQFLSHVLAFLNAVLGLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAA-SARVEGSENGRMPAFYSKVLQKLEEFVISDERL--- 355
ATG +SCDYIYDSS + E S +G MPA + +L+KLE+F DE L
Sbjct: 54 LNQVVVIATGYSSCDYIYDSSLTPNGNFESSGSG-MPALFGSLLEKLEDFAAKDEELSKE 112
Query: 356 EKXXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFS 535
E+ CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFS
Sbjct: 113 EEHEDRIASSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFS 172
Query: 536 AQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQ 715
AQR MVPIDSC IG Q+SAFLQQASYITGGV+ P+ LDGLFQYL+TIFATDLHSR F+Q
Sbjct: 173 AQRLMVPIDSCYIGTQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQ 232
Query: 716 LPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAN-PEVTTTTD 892
LPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFC+HHKKCSTCGSVFGQ+ +V++ ++
Sbjct: 233 LPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDVSSVSN 292
Query: 893 RKGKSPE 913
+K K+P+
Sbjct: 293 KKRKAPD 299
>ref|NP_564050.1| basal transcription factor complex subunit-related protein
[Arabidopsis thaliana] gi|21537277|gb|AAM61618.1|
unknown [Arabidopsis thaliana]
gi|92856638|gb|ABE77412.1| At1g18340 [Arabidopsis
thaliana] gi|332191584|gb|AEE29705.1| basal
transcription factor complex subunit-related protein
[Arabidopsis thaliana]
Length = 301
Score = 350 bits (897), Expect = 1e-93
Identities = 182/306 (59%), Positives = 209/306 (68%), Gaps = 5/306 (1%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M ++ SK Y+ NP FW +TTSI+F++FL+H
Sbjct: 1 MPAIASKQYSDDVSLLVLLLDTNPLFW-------STTSITFSQFLSHVLAFLNAVLGLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGR-MPAFYSKVLQKLEEFVISDERLEKX 364
ATG +SCDYIYDSS S NG MPA + +L+KLEEFV DE L K
Sbjct: 54 LNQVVVIATGYSSCDYIYDSSLTSNHGNFESNGTGMPAIFGSLLKKLEEFVTKDEELSKE 113
Query: 365 XXXXXXXXXXXXXXXXX---CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFS 535
CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFS
Sbjct: 114 EVSEDRIPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFS 173
Query: 536 AQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQ 715
AQR MVPIDSC IG Q+SAFLQQASYITGGV+ P+ LDGLFQYL+TIFATDLHSR F+Q
Sbjct: 174 AQRLMVPIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQ 233
Query: 716 LPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAN-PEVTTTTD 892
LPKP+GVDFRASCFCHKKTIDMGYICSVCLSIFC+HHKKCSTCGSVFGQ+ + ++ +D
Sbjct: 234 LPKPIGVDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDASSASD 293
Query: 893 RKGKSP 910
+K K+P
Sbjct: 294 KKRKAP 299
>ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arabidopsis lyrata subsp.
lyrata] gi|297338839|gb|EFH69256.1| hypothetical protein
ARALYDRAFT_472054 [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 349 bits (895), Expect = 2e-93
Identities = 183/306 (59%), Positives = 210/306 (68%), Gaps = 5/306 (1%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M SV SK Y+ NP FW +TTSI+F++FL+H
Sbjct: 1 MPSVVSKQYSDDVSLLVLLLDTNPLFW-------STTSITFSQFLSHVLAFLNAVLGLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGR-MPAFYSKVLQKLEEFVISDERL--- 355
ATG +SCDYIYDSS S NG MPA + +L+KLE+FV DE L
Sbjct: 54 LNQVVVIATGYSSCDYIYDSSLTSNHGNLESNGTGMPALFGSLLKKLEDFVTKDEELSRE 113
Query: 356 EKXXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFS 535
E CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFS
Sbjct: 114 EVSEDRIPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFS 173
Query: 536 AQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQ 715
AQR MVPIDSC IG Q+SAFLQQASYITGGV+ P+ LDGLFQYL+TIFATDLHSR+F+Q
Sbjct: 174 AQRLMVPIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRSFVQ 233
Query: 716 LPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAN-PEVTTTTD 892
LPKP+GVDFRASCFCHKKTIDMGYICSVCLSIFC+HHKKCSTCGSVFGQ+ + ++ +D
Sbjct: 234 LPKPIGVDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDASSVSD 293
Query: 893 RKGKSP 910
+K K+P
Sbjct: 294 KKRKAP 299
>ref|XP_006472763.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
X2 [Citrus sinensis]
Length = 293
Score = 343 bits (881), Expect = 7e-92
Identities = 185/306 (60%), Positives = 207/306 (67%), Gaps = 4/306 (1%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
MAS PSKLY+ NPFFW S S+SF++FLTH
Sbjct: 1 MASAPSKLYSDDVSLVVVLLDTNPFFWSSS-------SLSFSQFLTHVLAFFNAILTLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEKXX 367
ATG NSCDY+YDSS+ + G NGRMP+ + +LQ LEEF+ DE+L K
Sbjct: 54 LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGKQE 111
Query: 368 XXXXXXXXXXXXXXXX--CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFRSG LHPQPR GSPDGPEQYVA+MNAIFSAQ
Sbjct: 112 PEGRIACSLLSGSLSMALCYIQRVFRSGLLHPQPR-----GSPDGPEQYVAIMNAIFSAQ 166
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSC +GAQ+SAFLQQASYITGGV+ KPQ LDGLFQYL TIF TDLHSRNFLQLP
Sbjct: 167 RSMVPIDSCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNFLQLP 226
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQA--NPEVTTTTDR 895
KPVGVDFRASCFCHK TIDMGYICSVCLSI+CKH KKCSTCGSVFGQA + + T+R
Sbjct: 227 KPVGVDFRASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPSATNR 286
Query: 896 KGKSPE 913
K K+ +
Sbjct: 287 KRKTTD 292
>ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Capsella rubella]
gi|482574167|gb|EOA38354.1| hypothetical protein
CARUB_v10009867mg [Capsella rubella]
Length = 301
Score = 342 bits (877), Expect = 2e-91
Identities = 182/308 (59%), Positives = 208/308 (67%), Gaps = 6/308 (1%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M SV SK Y NPFFW +TTSI+F++FL+H
Sbjct: 1 MPSVASKQYPDDVSLLVLLLDTNPFFW-------STTSITFSQFLSHVLAFLNAVLGLNQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAAS--ARVEGSENGRMPAFYSKVLQKLEEFVISDERL-- 355
ATG +SC+YIYDSS S E G MP ++ +L KLE+FV DE L
Sbjct: 54 LNQVVVIATGYSSCEYIYDSSLTSNHGSFERDRTG-MPPLFASLLNKLEDFVTKDEELSR 112
Query: 356 -EKXXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIF 532
E CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IF
Sbjct: 113 EEGNEDRTPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIF 172
Query: 533 SAQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFL 712
SAQR MVPIDSC IG Q+SAFLQQASYITGGV+ P+ LDGLFQYL+TIFATDLHSR F+
Sbjct: 173 SAQRLMVPIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFV 232
Query: 713 QLPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAN-PEVTTTT 889
QLPKP+GVDFRASCFCHKKTIDMGYICSVCLSIFC+HHKKCSTCGSVFGQ+ E ++ +
Sbjct: 233 QLPKPIGVDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDESSSVS 292
Query: 890 DRKGKSPE 913
D+K K+ +
Sbjct: 293 DKKKKASQ 300
>gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Mimulus guttatus]
Length = 295
Score = 342 bits (876), Expect = 3e-91
Identities = 177/295 (60%), Positives = 201/295 (68%), Gaps = 2/295 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M V SKLY NPFFW + +++ F++F++H
Sbjct: 1 MTPVSSKLYTDDVSLLVVLIDTNPFFWN-----SVKSNLPFSKFISHVLAFLNSILLVNQ 55
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL--EK 361
ATG NSCDY++DSS A ++ + +E+ +LQKLEEFV DE L E+
Sbjct: 56 QNQVVVLATGHNSCDYVFDSSVAQSQNQRAEH---------LLQKLEEFVDKDESLCREE 106
Query: 362 XXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFRSG LHP PRILCL GSPDGP QYVA+MN+IFSAQ
Sbjct: 107 SVDGQGFSLLSGSLSMALCYIQRVFRSGPLHPHPRILCLHGSPDGPGQYVAIMNSIFSAQ 166
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPID+CVIG QHSAFLQQASYITGGVYLKPQLLDGLFQYLST+FATDLHSR FLQLP
Sbjct: 167 RSMVPIDACVIGTQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTVFATDLHSRAFLQLP 226
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTT 886
KP GVDFRASCFCHK TIDMGYICSVCLSIFCKH KKCSTCGSVFGQA + ++T
Sbjct: 227 KPAGVDFRASCFCHKNTIDMGYICSVCLSIFCKHQKKCSTCGSVFGQAQAQDSST 281
>ref|XP_004500559.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
X2 [Cicer arietinum]
Length = 294
Score = 337 bits (864), Expect = 7e-90
Identities = 174/302 (57%), Positives = 198/302 (65%), Gaps = 2/302 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M S PSKLYA NPFFW TT F+EFL+
Sbjct: 1 MTSAPSKLYADDVSLLVVTLDTNPFFW-------TTFPFHFSEFLSQVLAFLNSILLLGQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEKXX 367
ATG NSC YIYDS+ S R S NG MPA YS +L LEEF+ D++L
Sbjct: 54 LNQLVVIATGCNSCGYIYDST--SNRNHASTNGTMPALYSNLLHNLEEFLARDQKLTMPH 111
Query: 368 XXXXXXXXXXXXXXXX--CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQR FRSG +HPQPRILCLQGS DGPEQYVA+MNAIFSAQ
Sbjct: 112 APVTVPSSLLSGSLSMALCYIQRAFRSGPMHPQPRILCLQGSTDGPEQYVAIMNAIFSAQ 171
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RS VP+DSC IG+ +SAFLQQASYITGG+Y +P +DGLFQYLST+FATDLHSR FL+LP
Sbjct: 172 RSSVPVDSCYIGSNNSAFLQQASYITGGIYYRPPQMDGLFQYLSTVFATDLHSRAFLRLP 231
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
K +GVDFRASCFCHK+TIDMGY+CSVCLSIFC+HH KCSTC SVFGQA V + +RK
Sbjct: 232 KSLGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCSSVFGQAQSNVASADNRKR 291
Query: 902 KS 907
K+
Sbjct: 292 KA 293
>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
tuberosum]
Length = 290
Score = 336 bits (862), Expect = 1e-89
Identities = 175/302 (57%), Positives = 203/302 (67%), Gaps = 2/302 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M V SKLYA NP+FW ++ T+ +F +F++H
Sbjct: 1 MTPVSSKLYADDVSLLMVLVDTNPYFW----SSMKNTAFTFPKFISHVLAFLNSILLLNQ 56
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL--EK 361
ATG NSCDY++DSS +S + +L+KLE+FV DE L E
Sbjct: 57 MNQVVVIATGYNSCDYVFDSSTSSMQRAEC-----------LLEKLEDFVDKDESLSQED 105
Query: 362 XXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFRSG LHPQPRILCL GSPDGP QYVAVMN+IFSAQ
Sbjct: 106 SVDGVGFSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQ 165
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSCVIG+QHSAFLQQASYITGGVYLKPQ+ DGLFQYLST+FATDLHSR+FLQLP
Sbjct: 166 RSMVPIDSCVIGSQHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRSFLQLP 225
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
+PVGVDFRASCFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGS FG+A + + +D++
Sbjct: 226 RPVGVDFRASCFCHKNTIDMGFICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQRR 285
Query: 902 KS 907
S
Sbjct: 286 TS 287
>ref|XP_004241513.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
lycopersicum]
Length = 290
Score = 336 bits (862), Expect = 1e-89
Identities = 175/302 (57%), Positives = 203/302 (67%), Gaps = 2/302 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M V SKLYA NP+FW ++ T+ +F +F++H
Sbjct: 1 MTPVSSKLYADDVSLLMVLVDTNPYFW----SSMKNTAFTFPKFISHVLAFLNSILLLNQ 56
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERL--EK 361
ATG NSCDY++DSS +S + +L+KLE+FV DE L E
Sbjct: 57 MNQVVVIATGYNSCDYVFDSSTSSMQRAEC-----------LLEKLEDFVDKDESLSQED 105
Query: 362 XXXXXXXXXXXXXXXXXXCYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQRVFRSG LHPQPRILCL GSPDGP QYVAVMN+IFSAQ
Sbjct: 106 SVDGVGFSLLSGALSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQ 165
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RSMVPIDSCVIG+QHSAFLQQASYITGGVYLKPQ+ DGLFQYLST+FATDLHSR+FLQLP
Sbjct: 166 RSMVPIDSCVIGSQHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRSFLQLP 225
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
+PVGVDFRASCFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGS FG+A + + +D++
Sbjct: 226 RPVGVDFRASCFCHKNTIDMGFICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQRR 285
Query: 902 KS 907
S
Sbjct: 286 TS 287
>ref|XP_007137405.1| hypothetical protein PHAVU_009G124300g [Phaseolus vulgaris]
gi|561010492|gb|ESW09399.1| hypothetical protein
PHAVU_009G124300g [Phaseolus vulgaris]
Length = 292
Score = 329 bits (844), Expect = 1e-87
Identities = 174/302 (57%), Positives = 198/302 (65%), Gaps = 2/302 (0%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M S PSKLYA NPFFW TT FAEFL+
Sbjct: 1 MPSAPSKLYADDVSLLVVTLDTNPFFW-------TTFPFPFAEFLSQVLAFLNSILLLGQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEKXX 367
ATG NSC Y+YDS+ S R GS G MPA YS +L L EF+ D++LE
Sbjct: 54 LNQLIVIATGCNSCAYVYDST--SERNHGSTTGTMPALYSNLLHNLHEFLARDKQLEASH 111
Query: 368 XXXXXXXXXXXXXXXX--CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQ 541
CYIQR FRSG + PQPRILCLQG+ DGPEQYVA+MNAIFSAQ
Sbjct: 112 KPGTVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGTADGPEQYVAIMNAIFSAQ 171
Query: 542 RSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLP 721
RS VPIDSC IG+ +SAFLQQASYITGG+Y KP LDGL+QYLST+FATDLHSR FL+LP
Sbjct: 172 RSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLP 231
Query: 722 KPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRKG 901
K VGVDFRASCFCHK+TIDMG++CSVCLSIFC+HH KCSTCGSVFGQA + + +RK
Sbjct: 232 KSVGVDFRASCFCHKQTIDMGFVCSVCLSIFCEHHDKCSTCGSVFGQAKVD-ASEANRKR 290
Query: 902 KS 907
K+
Sbjct: 291 KA 292
>ref|XP_003523449.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
X1 [Glycine max]
Length = 294
Score = 325 bits (833), Expect = 3e-86
Identities = 171/304 (56%), Positives = 197/304 (64%), Gaps = 4/304 (1%)
Frame = +2
Query: 8 MASVPSKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXX 187
M S PSKLYA NPFFW +T FAEFL+
Sbjct: 1 MPSAPSKLYADDVSLLVVTLDTNPFFW-------STFPFPFAEFLSQVLAFLNTILLLGQ 53
Query: 188 XXXXXXXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEKXX 367
ATG NSC Y+YDS+ S + GS G MPA YS +L L+EF+ D +L+
Sbjct: 54 LNQVIVIATGCNSCGYVYDST--SDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADA 111
Query: 368 XXXXXXXXXXXXXXXX----CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFS 535
CYIQR FRSG + PQPRILCLQG+ DGPEQYVA+MNAIFS
Sbjct: 112 SHAPGIVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFS 171
Query: 536 AQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQ 715
AQ S VPIDSC IG+ +SAFLQQASYITGG+Y KP LDGL+QYLST+FATDLHSR FL+
Sbjct: 172 AQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLR 231
Query: 716 LPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDR 895
LPK VGVDFRASCFCHK+TIDMGY+CSVCLSIFC+HH KCSTCGSVFGQA + + DR
Sbjct: 232 LPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLD-ASAADR 290
Query: 896 KGKS 907
+ K+
Sbjct: 291 QRKA 294
>ref|NP_001045748.1| Os02g0125800 [Oryza sativa Japonica Group]
gi|41053068|dbj|BAD08012.1| putative TFIIH basal
transcription factor complex p34 subunit [Oryza sativa
Japonica Group] gi|113535279|dbj|BAF07662.1|
Os02g0125800 [Oryza sativa Japonica Group]
gi|215768495|dbj|BAH00724.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 289
Score = 318 bits (815), Expect = 3e-84
Identities = 163/296 (55%), Positives = 194/296 (65%), Gaps = 4/296 (1%)
Frame = +2
Query: 23 SKLYAXXXXXXXXXXXINPFFWGGSTTANTTTSISFAEFLTHXXXXXXXXXXXXXXXXXX 202
SKLY+ NP FW T ++ FA+F H
Sbjct: 4 SKLYSDDVSLAVVVVDTNPLFWA-------TAALPFADFFAHLIHYVNSLLLLNHLNHVV 56
Query: 203 XXATGVNSCDYIYDSSAASARVEGSENGRMPAFYSKVLQKLEEFVISDERLEKXXXXXXX 382
A G++SC YI+DSS ASA S + A ++K +K++EF+ D R
Sbjct: 57 VIAAGLSSCTYIFDSSDASA----SGAADVAATFAKASRKMDEFIAEDARATSSNGSVAD 112
Query: 383 XXXXXXXXXXX----CYIQRVFRSGSLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSM 550
CYIQRVFRSG+ HPQPRILCLQGSPDGPEQYVAVMN+IFSAQRSM
Sbjct: 113 GNAASLLSGALSLALCYIQRVFRSGTRHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRSM 172
Query: 551 VPIDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTIFATDLHSRNFLQLPKPV 730
VPIDSC++G Q SAFLQQASYITGGVYLKPQ L+GLFQYL+ +FATDLHSR FL+LPK +
Sbjct: 173 VPIDSCIVGTQDSAFLQQASYITGGVYLKPQELNGLFQYLAAVFATDLHSRTFLRLPKTL 232
Query: 731 GVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQANPEVTTTTDRK 898
GVDFRASCFCHKKTIDMGY+CSVCLSIFCK+HKKCSTCGS F + P++ + D++
Sbjct: 233 GVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSEFNRVMPDLNSVPDQR 288