BLASTX nr result

ID: Sinomenium21_contig00001496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00001496
         (1259 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai...    74   2e-10
gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum...    56   4e-06
gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]             58   8e-06

>gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops
           tauschii]
          Length = 950

 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 38/54 (70%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = -1

Query: 770 ELSPCDLEVTGSSRGNSLLL-CKVRLRTIDPK*SDPSPGPCIC*SFVHQAAL*P 612
           +L PCD EVTGSS GNSLLL C+ RLRTIDPK SDPSP PC   S++H+AAL P
Sbjct: 11  KLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRAALFP 64


>gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu]
          Length = 1047

 Score = 55.8 bits (133), Expect(2) = 4e-06
 Identities = 30/40 (75%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
 Frame = -1

Query: 770 ELSPCDLEVTGSSRGNSLL-LCKVRLRTIDPK*SDPSPGP 654
           EL PCD EVTGSS GNSLL  C+ RLRTID K SDPSP P
Sbjct: 634 ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDP 673



 Score = 23.1 bits (48), Expect(2) = 4e-06
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 658 DPAYARASCTRLPF 617
           DP  A A+CT LPF
Sbjct: 672 DPGQAGATCTGLPF 685


>gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]
          Length = 1424

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +1

Query: 655 GPGEGSDYFGSIVRSLTLH-SKRLFPRLEPVTSRSHGDNSYRCAKRTTF 798
           G GEGSD+FGSIVRSL LH  KRLFP LEPVTS S G N++  A R  F
Sbjct: 63  GSGEGSDHFGSIVRSLPLHFCKRLFPGLEPVTSWSQG-NNFTAAPRLPF 110


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