BLASTX nr result

ID: Sinomenium21_contig00001310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00001310
         (306 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005107982.1| PREDICTED: la-related protein CG11505-like [...    55   8e-06

>ref|XP_005107982.1| PREDICTED: la-related protein CG11505-like [Aplysia californica]
          Length = 1243

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
 Frame = -3

Query: 235 PHHHHQVWSLRQEAH---------HHHQDQLQPVDGQHTYHADHLRRRDSQPCPPPHCRS 83
           PHHHHQ    +Q+ H         HHHQ Q QP      +H         QP PPPH + 
Sbjct: 728 PHHHHQQQQQQQQHHSHHHHPPPPHHHQQQQQPSQPGAPHHPHPHHHHHHQP-PPPHHQH 786

Query: 82  VNHNWHH-RRPPPQ 44
           V+ N HH ++PPPQ
Sbjct: 787 VSVNQHHTQQPPPQ 800


Top