BLASTX nr result
ID: Sinomenium21_contig00001265
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00001265
(1631 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140... 583 e-163
ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Popu... 578 e-162
ref|XP_002302114.1| mRNA-binding family protein [Populus trichoc... 577 e-162
ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 ... 575 e-161
ref|XP_007199894.1| hypothetical protein PRUPE_ppa006606mg [Prun... 572 e-160
gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis] 565 e-158
ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding pro... 564 e-158
ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding pro... 559 e-156
ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding pro... 559 e-156
ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citr... 559 e-156
ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding pro... 559 e-156
ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arab... 557 e-156
ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding pro... 556 e-156
ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 ... 555 e-155
ref|XP_007144635.1| hypothetical protein PHAVU_007G172100g [Phas... 555 e-155
gb|ACU24035.1| unknown [Glycine max] 553 e-155
ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Caps... 550 e-154
ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding pro... 549 e-153
gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotian... 549 e-153
ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabi... 549 e-153
>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
vinifera] gi|147789789|emb|CAN73874.1| hypothetical
protein VITISV_039540 [Vitis vinifera]
Length = 397
Score = 583 bits (1502), Expect = e-163
Identities = 284/344 (82%), Positives = 309/344 (89%)
Frame = +3
Query: 285 TRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESSDK 464
T+RLS T+N A+KKK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVT+MTVG+E+SDK
Sbjct: 56 TKRLSFSTLNVKAQKKK--VLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEENSDK 113
Query: 465 MKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAKNA 644
MKKPPF+RFSEI S G+T FDVVLDNNGKD+DTVRPVV+WAK++
Sbjct: 114 MKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDWAKSS 173
Query: 645 GVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIGSG 824
GV+QFL+ISSAGIYKPTDEPPHVEGD+VKADAGHV VE YI+E+FGSWA+FRPQYMIGSG
Sbjct: 174 GVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYMIGSG 233
Query: 825 NNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNCVS 1004
NNKDCEEWFFDRIVRDRPVPIP SGMQLTNIAHVRDLSSMLTLAVENP+++SG IFNCVS
Sbjct: 234 NNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPAAASGNIFNCVS 293
Query: 1005 DRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILGWK 1184
DRAVTLDGMA+LCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAK+ILGW
Sbjct: 294 DRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDILGWH 353
Query: 1185 NTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
TNLPEDLKERF+EYV IGRDKKPMKFEIDDKILESLKV V V
Sbjct: 354 GITNLPEDLKERFDEYVKIGRDKKPMKFEIDDKILESLKVSVAV 397
>ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Populus trichocarpa]
gi|550339578|gb|EEE93769.2| hypothetical protein
POPTR_0005s23110g [Populus trichocarpa]
Length = 437
Score = 578 bits (1489), Expect = e-162
Identities = 287/344 (83%), Positives = 308/344 (89%), Gaps = 2/344 (0%)
Frame = +3
Query: 285 TRRL--SSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESS 458
+RRL SSF V ASA +KKK +LIVNTNSGGHAVIGFYFAKELLGSGHEV+++TVG+ESS
Sbjct: 93 SRRLFASSFPVKASAAEKKK-ILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVGEESS 151
Query: 459 DKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAK 638
DKMKKPPF+RFSEIV G+T FDVVLDNNGKDLDTVRPVV+WAK
Sbjct: 152 DKMKKPPFSRFSEIVGAGGKTVWGNPAEVGKAVEGATFDVVLDNNGKDLDTVRPVVDWAK 211
Query: 639 NAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIG 818
+AGVKQFL+ISSAGIYKPTDEPPHVEGDVVKADAGHV VEKYIAEIF SWA+FRPQYMIG
Sbjct: 212 SAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIG 271
Query: 819 SGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNC 998
SGNNKDCEEWFFDRIVR RPVPIP SGMQLTNIAHVRDLSSMLTLAVENP ++SG IFNC
Sbjct: 272 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGNIFNC 331
Query: 999 VSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILG 1178
VSDRAVTLDGMA+LCAQAAG PV I+HYDPKAVGIDAKKAFPFRNMHFYAEPRAAK+ILG
Sbjct: 332 VSDRAVTLDGMAKLCAQAAGLPVEIMHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDILG 391
Query: 1179 WKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
W+ TTNLPEDLKERF+EYV IGRDKKPM+FEIDDKILESLKV V
Sbjct: 392 WQGTTNLPEDLKERFDEYVKIGRDKKPMQFEIDDKILESLKVPV 435
>ref|XP_002302114.1| mRNA-binding family protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| mRNA-binding family protein
[Populus trichocarpa]
Length = 404
Score = 577 bits (1488), Expect = e-162
Identities = 288/344 (83%), Positives = 307/344 (89%), Gaps = 2/344 (0%)
Frame = +3
Query: 285 TRRL--SSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESS 458
+RRL SSFTV ASA +KKK VLIVNTNSGGHAVIGFYFAKELLGSGHEVT++TVG+ESS
Sbjct: 60 SRRLFTSSFTVKASAAEKKK-VLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESS 118
Query: 459 DKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAK 638
DKMKKPPF+RFSEIVS G+T FDVVLDNNGKDLD VRPVV+WAK
Sbjct: 119 DKMKKPPFSRFSEIVSAGGKTVWGNPAEVGKVVEGAAFDVVLDNNGKDLDAVRPVVDWAK 178
Query: 639 NAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIG 818
+AGVKQFL+ISSAGIYK TDEPPHVEGDVVKADAGHV VEKYIAEIF SWA+FRPQYMIG
Sbjct: 179 SAGVKQFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIG 238
Query: 819 SGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNC 998
SGNNKDCEEWFFDRIVR RPVPIP SGMQLTNIAH RDLSSMLTLAVENP ++SG+IFNC
Sbjct: 239 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHARDLSSMLTLAVENPEAASGRIFNC 298
Query: 999 VSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILG 1178
VSDRAVTLDGMA+LCAQAAG PV IVHYDPK VGIDAKKAFPFRNMHFYAEPRAAKEILG
Sbjct: 299 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKVVGIDAKKAFPFRNMHFYAEPRAAKEILG 358
Query: 1179 WKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
W+ TTNLPEDLKERF++YV IGRDKKPM+FEIDDKILESLKV V
Sbjct: 359 WQGTTNLPEDLKERFDDYVKIGRDKKPMQFEIDDKILESLKVPV 402
>ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 kDa isoform 1 [Theobroma
cacao] gi|508702881|gb|EOX94777.1| Chloroplast stem-loop
binding protein of 41 kDa isoform 1 [Theobroma cacao]
Length = 400
Score = 575 bits (1481), Expect = e-161
Identities = 283/340 (83%), Positives = 300/340 (88%)
Frame = +3
Query: 297 SSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESSDKMKKP 476
SSFTV AS +KKK VLIVNTNSGGHAVIGFYFAKELLGSGHEVT++TVGDE SDKMKKP
Sbjct: 62 SSFTVKASGGEKKK-VLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMKKP 120
Query: 477 PFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAKNAGVKQ 656
PFNRFSEIVS G+T FDVVLDNNGKDLDTVRPV++WAK++GV Q
Sbjct: 121 PFNRFSEIVSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVIDWAKSSGVDQ 180
Query: 657 FLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIGSGNNKD 836
FLYISSAGIYKPTDEPPHVEGDVVKADAGHV VEKYIAEIF SWA+FRPQYMIGSGNNKD
Sbjct: 181 FLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGNNKD 240
Query: 837 CEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNCVSDRAV 1016
CEEWFFDRIVR RPVPIP SGMQLTNIAHVRDLSSMLTLAVE P ++S IFNCVSDRAV
Sbjct: 241 CEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASSNIFNCVSDRAV 300
Query: 1017 TLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILGWKNTTN 1196
TLDGMARLCA+AAG PV I HYDPKAVGIDAKKAFPFRNMHFY+EPRAAK+ILGW TTN
Sbjct: 301 TLDGMARLCAEAAGLPVEIAHYDPKAVGIDAKKAFPFRNMHFYSEPRAAKDILGWNGTTN 360
Query: 1197 LPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
LPEDLKERFEEYV IGRDK+PM+FE+DDKILESLKV V V
Sbjct: 361 LPEDLKERFEEYVKIGRDKEPMQFELDDKILESLKVAVAV 400
>ref|XP_007199894.1| hypothetical protein PRUPE_ppa006606mg [Prunus persica]
gi|462395294|gb|EMJ01093.1| hypothetical protein
PRUPE_ppa006606mg [Prunus persica]
Length = 403
Score = 572 bits (1475), Expect = e-160
Identities = 281/353 (79%), Positives = 311/353 (88%)
Frame = +3
Query: 258 VSYPLRLRHTRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVM 437
V+YP R R S F++ ASA +KKK VLIVNTN GGHAVIGFYFAKELLGSGH+VTV+
Sbjct: 53 VAYPAISRRFNRCS-FSIKASAGEKKK-VLIVNTNGGGHAVIGFYFAKELLGSGHQVTVL 110
Query: 438 TVGDESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVR 617
TVG+ESSDKMKKPPF+RFSEIVS G+T FDVVL+NNGKDLDTVR
Sbjct: 111 TVGEESSDKMKKPPFSRFSEIVSAGGKTVWGEPADIGKILEGTAFDVVLENNGKDLDTVR 170
Query: 618 PVVNWAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVF 797
PV +WAK++GVKQFLYISSAGIYKPT+EPPHVEGDVVKADA HVAVEKYIAEIFGSWA+F
Sbjct: 171 PVADWAKSSGVKQFLYISSAGIYKPTEEPPHVEGDVVKADASHVAVEKYIAEIFGSWAIF 230
Query: 798 RPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSS 977
RPQYM+GSGNNKDCEEWFFDRI+RDRPVPIP SG+QLTNI+HVRDLSSMLTLAVENP ++
Sbjct: 231 RPQYMLGSGNNKDCEEWFFDRILRDRPVPIPGSGLQLTNISHVRDLSSMLTLAVENPDAA 290
Query: 978 SGKIFNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPR 1157
S IFNCVSDRAVTLDG+A+LCAQAAGRPVNIVHYDPKA G+DAKKAFPFRNMHFYAEPR
Sbjct: 291 SSNIFNCVSDRAVTLDGLAKLCAQAAGRPVNIVHYDPKAAGVDAKKAFPFRNMHFYAEPR 350
Query: 1158 AAKEILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
AAKE+LGWK+TTNL EDLKERFEEY+ IGRDKK +KFE+DDKI+ESLKV V V
Sbjct: 351 AAKEVLGWKSTTNLTEDLKERFEEYLKIGRDKKTIKFELDDKIIESLKVPVAV 403
>gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]
Length = 408
Score = 565 bits (1455), Expect = e-158
Identities = 277/353 (78%), Positives = 305/353 (86%), Gaps = 2/353 (0%)
Frame = +3
Query: 258 VSYPLRL--RHTRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVT 431
V+ P R R SF+V ASA KK+ VLIVNTNSGGHAVIGFYFAKELLGSGH+VT
Sbjct: 55 VTLPTRCSRRFVNPACSFSVRASAADKKR-VLIVNTNSGGHAVIGFYFAKELLGSGHDVT 113
Query: 432 VMTVGDESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDT 611
++TVGDE SDKMKKPPFNRFSEIVS G+T FDVVLDNNGKDLDT
Sbjct: 114 ILTVGDEGSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVGGAEFDVVLDNNGKDLDT 173
Query: 612 VRPVVNWAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWA 791
VRPVV+WAK++GVK F +ISSAGIYKPTDEPPHVEGDVVKADAGHV VEKYIAE+F SWA
Sbjct: 174 VRPVVDWAKSSGVKHFFFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEVFSSWA 233
Query: 792 VFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPS 971
FRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIP SG+QLTNI+HV+DLSSML+LAVE P
Sbjct: 234 AFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLTNISHVKDLSSMLSLAVEKPE 293
Query: 972 SSSGKIFNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAE 1151
+++G IFNCVSDR VTLDG+A+LCAQAAGRPVN+VHYDPKAVGIDAKKAFPFRNMHFYAE
Sbjct: 294 AANGNIFNCVSDRTVTLDGIAKLCAQAAGRPVNVVHYDPKAVGIDAKKAFPFRNMHFYAE 353
Query: 1152 PRAAKEILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
PRAAK+ILGW+ TTNLPEDLKERFEEYV IGRDKK +KFE+DDKIL++LKV V
Sbjct: 354 PRAAKDILGWQGTTNLPEDLKERFEEYVKIGRDKKDIKFELDDKILDALKVPV 406
>ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cucumis sativus]
Length = 409
Score = 564 bits (1453), Expect = e-158
Identities = 275/337 (81%), Positives = 298/337 (88%)
Frame = +3
Query: 300 SFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESSDKMKKPP 479
SF+V AS+ KKK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVT++TVG++SSDKM KPP
Sbjct: 72 SFSVRASSSPKKK-VLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPP 130
Query: 480 FNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAKNAGVKQF 659
FNRFSEIVSG G+T FDVVLDNNGKD+DTVRPV++WAK++GVKQF
Sbjct: 131 FNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQF 190
Query: 660 LYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIGSGNNKDC 839
L+ISSAGIYK TDEPPHVEGD VKADAGHV VEKYIAE+F SWAVFRPQYMIGSGNNKDC
Sbjct: 191 LFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSGNNKDC 250
Query: 840 EEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNCVSDRAVT 1019
EEWFFDRIVRDRP+PIP SGMQLTNIAHVRDLSSMLTLAVE P + IFNCVS RAVT
Sbjct: 251 EEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVT 310
Query: 1020 LDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILGWKNTTNL 1199
LDGMA+LCAQAAGRPVNIVHYDPKAVG+DAKKAFPFRNMHFYAEPRAA+EILGW+ TTNL
Sbjct: 311 LDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNL 370
Query: 1200 PEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
PEDLKERFEEYV IGRDKK +KFE+DDKILESL V V
Sbjct: 371 PEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPV 407
>ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cicer arietinum]
Length = 403
Score = 559 bits (1441), Expect = e-156
Identities = 272/346 (78%), Positives = 296/346 (85%)
Frame = +3
Query: 279 RHTRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESS 458
R + +SFT+ A+A KKKVLI+NTNSGGHAVIGFYFAKELL +GH VT+ TVGD+SS
Sbjct: 58 RFSNHAASFTITATASLNKKKVLIINTNSGGHAVIGFYFAKELLAAGHSVTIFTVGDQSS 117
Query: 459 DKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAK 638
DKM KPPFNRFSEIVS G T FDVVLDNNGKDLD VRPV++WAK
Sbjct: 118 DKMNKPPFNRFSEIVSAGGSTVWGNPADVGSVVGGEAFDVVLDNNGKDLDAVRPVIDWAK 177
Query: 639 NAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIG 818
AG KQFL+ISSAGIYKPTDEPPHVEGDVVKADAGHV VEKYI E F SWAVFRPQYMIG
Sbjct: 178 TAGAKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIEETFESWAVFRPQYMIG 237
Query: 819 SGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNC 998
SGNNKDCEEWFFDRIVRDRPV IP SG+QLTNI+HVRDLSSMLT AVENP ++S IFNC
Sbjct: 238 SGNNKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVRDLSSMLTQAVENPDAASKGIFNC 297
Query: 999 VSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILG 1178
VSDRAVTL+G+A+LCAQAAGRPVNIVHYDPKA+GIDAKKAFPFRNMHFYAEPRAAK LG
Sbjct: 298 VSDRAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPFRNMHFYAEPRAAKSKLG 357
Query: 1179 WKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
W +TTNLPEDLKERFEEY+ IGRDKKP+KFE+DDKILE+LKV V V
Sbjct: 358 WSSTTNLPEDLKERFEEYIKIGRDKKPIKFEVDDKILEALKVPVAV 403
>ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 404
Score = 559 bits (1441), Expect = e-156
Identities = 273/345 (79%), Positives = 303/345 (87%)
Frame = +3
Query: 282 HTRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESSD 461
H ++F+++ASA +KKK VLIVNTNSGGHA+IGFYFAKELLG+GH VT++TVGDE SD
Sbjct: 61 HFATHAAFSISASAAEKKK-VLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSD 119
Query: 462 KMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAKN 641
KMKKPPFNRFSEIVS GRT FDVVLDNNGKDL TVRPV++WAK+
Sbjct: 120 KMKKPPFNRFSEIVSAGGRTVWGNPAQVGSVVGGEVFDVVLDNNGKDLGTVRPVIDWAKS 179
Query: 642 AGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIGS 821
+GVKQFL+ISSAGIYKPTDEPPHVEGDVVKADAGHV VEKYI E +GSWAVFRPQYMIGS
Sbjct: 180 SGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETYGSWAVFRPQYMIGS 239
Query: 822 GNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNCV 1001
GNNKDCEEWFFDRIVRDRPVPIP SG+QL+NIAHVRDLSSMLTLAVENP +++ IFNCV
Sbjct: 240 GNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEAANQTIFNCV 299
Query: 1002 SDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILGW 1181
SDRAVTLDG+A+LCAQAAGRPVNIVHYDPKAVG+DAKKAFPFR HFYAEPRAAK LGW
Sbjct: 300 SDRAVTLDGIAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRTYHFYAEPRAAKAKLGW 359
Query: 1182 KNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
++TTNLPEDLKERFEEYV IGRDKK ++FE+DDKILE+LKV V V
Sbjct: 360 QSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVSV 404
>ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citrus clementina]
gi|568852108|ref|XP_006479722.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa a, chloroplastic-like
[Citrus sinensis] gi|557546339|gb|ESR57317.1|
hypothetical protein CICLE_v10020449mg [Citrus
clementina]
Length = 401
Score = 559 bits (1440), Expect = e-156
Identities = 276/341 (80%), Positives = 298/341 (87%)
Frame = +3
Query: 294 LSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESSDKMKK 473
+S+FTV ASA +KKK VLIVNTNSGGHAVIGFY AKELLGSGHEVT+MTVGDE+SDKMKK
Sbjct: 62 VSAFTVKASAAEKKK-VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK 120
Query: 474 PPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAKNAGVK 653
PPFNRF+EIVS G+T FDVVLDNNGK+LD VRPV +WAK++GVK
Sbjct: 121 PPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
Query: 654 QFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIGSGNNK 833
QFL+ISSAGIYKP DEPPHVEGDVVK DAGHV VEKYI+E F +WA FRPQYMIGSGNNK
Sbjct: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK 240
Query: 834 DCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNCVSDRA 1013
DCEEWFFDRIVR RPVPIP SGMQ TNIAHVRDLSSMLTLAVENP ++S IFN VSDRA
Sbjct: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
Query: 1014 VTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILGWKNTT 1193
VTLDGMA+LCAQAAG PV IVHYDPKA GIDAKKAFPFRNMHFYAEPRAAK+ILGW++TT
Sbjct: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
Query: 1194 NLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
NLPEDLKERFEEYV IGRDKK M+FEIDDKILESLKV +PV
Sbjct: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
>ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 403
Score = 559 bits (1440), Expect = e-156
Identities = 273/356 (76%), Positives = 307/356 (86%)
Frame = +3
Query: 249 NFQVSYPLRLRHTRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEV 428
+F Y H ++F+++ASA +KKK VLIVNTNSGGHA+IGFYFAKELLG+GH V
Sbjct: 49 SFLSYYSSSSTHFATHAAFSISASAAEKKK-VLIVNTNSGGHAIIGFYFAKELLGAGHSV 107
Query: 429 TVMTVGDESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLD 608
T++TVG+E SDKMKKPPFNRFSEIVS GRT FDVVLDNNGKDL+
Sbjct: 108 TILTVGEEGSDKMKKPPFNRFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVVLDNNGKDLE 167
Query: 609 TVRPVVNWAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSW 788
TVRPV++WAK++GVKQFL++SSAGIYKPTDEPPHVEGDVVKADAGHV VEKYI E FGSW
Sbjct: 168 TVRPVIDWAKSSGVKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETFGSW 227
Query: 789 AVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENP 968
AVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIP SG+QL+NIAHVRDLSSMLTLAVENP
Sbjct: 228 AVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENP 287
Query: 969 SSSSGKIFNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYA 1148
+++ IFNCVSDRAVTLDG+A+LCAQAAGRPVNI+HYDPKAVG+DAKKAFPFR HFYA
Sbjct: 288 EAANQTIFNCVSDRAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPFRTYHFYA 347
Query: 1149 EPRAAKEILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
EPRAAK LGW++TTNLPEDLKERFEEYV IGRDKK ++FE+DDKILE+LKV V V
Sbjct: 348 EPRAAKAKLGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403
>ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein
ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 557 bits (1436), Expect = e-156
Identities = 274/347 (78%), Positives = 301/347 (86%), Gaps = 2/347 (0%)
Frame = +3
Query: 276 LRHTRRLS--SFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGD 449
LR +RRLS FTV AS+ KK VLIVNTNSGGHAVIGFYFAKELL +GH VT+MTVGD
Sbjct: 60 LRTSRRLSPQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGD 119
Query: 450 ESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVN 629
ESSDKMKKPPFNRFSEI+SG G+T FDVVLDNNGKDLDTVRPVV+
Sbjct: 120 ESSDKMKKPPFNRFSEIISGGGKTVWGNPADVANVVGGETFDVVLDNNGKDLDTVRPVVD 179
Query: 630 WAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQY 809
WAK++GVKQFL+ISSAGIYK T++PPHVEGD VKADAGHVAVEKY+AE FG+WA FRPQY
Sbjct: 180 WAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVAVEKYLAETFGNWASFRPQY 239
Query: 810 MIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKI 989
MIGSGNNKDCEEWFFDRIVRDR VPIP SG+QLTNI+HVRDLSSMLT AV NP ++SG I
Sbjct: 240 MIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPKAASGNI 299
Query: 990 FNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKE 1169
FNCVSDRAVTLDGMA+LCA AAG+ V IVHYDPKA+G+DAKKAFPFRNMHFYAEPRAAKE
Sbjct: 300 FNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFPFRNMHFYAEPRAAKE 359
Query: 1170 ILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
ILGW++ TNLPEDLKERFEEYV IGRDKK +KFE+DDKILE+LK V
Sbjct: 360 ILGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 406
>ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 404
Score = 556 bits (1434), Expect = e-156
Identities = 278/355 (78%), Positives = 305/355 (85%), Gaps = 2/355 (0%)
Frame = +3
Query: 258 VSYPLRLRHTRRLS--SFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVT 431
V+YP +RR S SF+V A A KKK VLIVNTNSGGHAVIGFYFAKELLGSGHEVT
Sbjct: 54 VTYPTT---SRRFSPCSFSVKAIAADKKK-VLIVNTNSGGHAVIGFYFAKELLGSGHEVT 109
Query: 432 VMTVGDESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDT 611
++TVG+ESSDKMKK PF RFSEIV G+T FDVVLDNNGKDLD
Sbjct: 110 ILTVGEESSDKMKKTPFTRFSEIVGAGGKTVWGEPAEIAKVLEGSAFDVVLDNNGKDLDA 169
Query: 612 VRPVVNWAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWA 791
V+PV +WAK++GVKQFL+ISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKY+AE+F SWA
Sbjct: 170 VKPVADWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYMAEVFSSWA 229
Query: 792 VFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPS 971
FRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIP SGMQLT I+HVRDLSSMLTLAVE P
Sbjct: 230 SFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTVISHVRDLSSMLTLAVEKPD 289
Query: 972 SSSGKIFNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAE 1151
++SG IFNCVSDRAVTLDG+A+LCAQAAGRPVNIVHY+PKA G+DAKKAFPFRNMHFYAE
Sbjct: 290 AASGNIFNCVSDRAVTLDGLAKLCAQAAGRPVNIVHYEPKAAGVDAKKAFPFRNMHFYAE 349
Query: 1152 PRAAKEILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
PRAAK+ILGWK+TTNL EDLKERFEEY+ IGRDKK +KF++DDKILESLK V V
Sbjct: 350 PRAAKDILGWKSTTNLSEDLKERFEEYLKIGRDKKAIKFDLDDKILESLKAPVAV 404
>ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 kDa isoform 2 [Theobroma
cacao] gi|508702882|gb|EOX94778.1| Chloroplast stem-loop
binding protein of 41 kDa isoform 2 [Theobroma cacao]
Length = 393
Score = 555 bits (1431), Expect = e-155
Identities = 276/340 (81%), Positives = 294/340 (86%)
Frame = +3
Query: 297 SSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESSDKMKKP 476
SSFTV AS +KKK VLIVNTNSGGHAVIGFYFAKELLGSGHEVT++TVGDE SDKMKKP
Sbjct: 62 SSFTVKASGGEKKK-VLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMKKP 120
Query: 477 PFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAKNAGVKQ 656
PFNRFSEIVS G+T FDVVLDNNGKDLDTVRPV++WAK++GV Q
Sbjct: 121 PFNRFSEIVSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVIDWAKSSGVDQ 180
Query: 657 FLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIGSGNNKD 836
FLYISSAGIYKPTDEPPHVEGDVVKADAGHV VEKYIAEIF SWA+FRPQYMIGSGNNKD
Sbjct: 181 FLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGNNKD 240
Query: 837 CEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNCVSDRAV 1016
CEEWFFD +PIP SGMQLTNIAHVRDLSSMLTLAVE P ++S IFNCVSDRAV
Sbjct: 241 CEEWFFD-------LPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASSNIFNCVSDRAV 293
Query: 1017 TLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILGWKNTTN 1196
TLDGMARLCA+AAG PV I HYDPKAVGIDAKKAFPFRNMHFY+EPRAAK+ILGW TTN
Sbjct: 294 TLDGMARLCAEAAGLPVEIAHYDPKAVGIDAKKAFPFRNMHFYSEPRAAKDILGWNGTTN 353
Query: 1197 LPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
LPEDLKERFEEYV IGRDK+PM+FE+DDKILESLKV V V
Sbjct: 354 LPEDLKERFEEYVKIGRDKEPMQFELDDKILESLKVAVAV 393
>ref|XP_007144635.1| hypothetical protein PHAVU_007G172100g [Phaseolus vulgaris]
gi|561017825|gb|ESW16629.1| hypothetical protein
PHAVU_007G172100g [Phaseolus vulgaris]
Length = 402
Score = 555 bits (1429), Expect = e-155
Identities = 272/346 (78%), Positives = 300/346 (86%)
Frame = +3
Query: 279 RHTRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESS 458
RH S+F+V+AS+ +KKK VLIVNTNSGGHA+IGFYFAKELLG+GH VTV+TVG+E S
Sbjct: 58 RHFVNQSAFSVSASSVEKKK-VLIVNTNSGGHAIIGFYFAKELLGAGHSVTVLTVGEEGS 116
Query: 459 DKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAK 638
DKMKKPPFNRFSEIVS GRT FDVVLDNNGKDL+TVRPV++WAK
Sbjct: 117 DKMKKPPFNRFSEIVSAGGRTVWGNPSEVGSVVGGEVFDVVLDNNGKDLETVRPVIDWAK 176
Query: 639 NAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIG 818
++GV QFL+ISSAGIYK TDEPPHVEGDVVKADAGHV VEKYI E FGSWAVFRPQYMIG
Sbjct: 177 SSGVNQFLFISSAGIYKQTDEPPHVEGDVVKADAGHVEVEKYIEETFGSWAVFRPQYMIG 236
Query: 819 SGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNC 998
SGNNKDCEEWFFDRIVRDRPVPIP SG+QL+NI H RDLSSMLTLAVE P +++ IFNC
Sbjct: 237 SGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNITHARDLSSMLTLAVEKPEAANSTIFNC 296
Query: 999 VSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILG 1178
VSDRAVTLDG+A+LCAQAAGRPVNIVHYDPKAVG+DAKKAFPFR HFYAEPRAAK LG
Sbjct: 297 VSDRAVTLDGIAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRTHHFYAEPRAAKSKLG 356
Query: 1179 WKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
W++TTNLPEDLKERFEEYV IGRDKK +KFE+DDKILE+LKV V V
Sbjct: 357 WESTTNLPEDLKERFEEYVKIGRDKKSIKFEVDDKILEALKVPVSV 402
>gb|ACU24035.1| unknown [Glycine max]
Length = 403
Score = 553 bits (1426), Expect = e-155
Identities = 271/356 (76%), Positives = 305/356 (85%)
Frame = +3
Query: 249 NFQVSYPLRLRHTRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEV 428
+F Y H ++F+++ASA +KKK VLIVNTNSGGHA+IGFYFAKELLG+GH V
Sbjct: 49 SFLSYYSSSSTHFATHAAFSISASAAEKKK-VLIVNTNSGGHAIIGFYFAKELLGAGHSV 107
Query: 429 TVMTVGDESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLD 608
T++TVG+E SDKMKKPPFNRFSEIVS GRT FDVVLDNNGK L+
Sbjct: 108 TILTVGEEGSDKMKKPPFNRFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVVLDNNGKGLE 167
Query: 609 TVRPVVNWAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSW 788
TVRPV++WAK++GVKQFL++SSAGIYKPTDEPPHVEGDVVKADAGHV VEKYI E FGSW
Sbjct: 168 TVRPVIDWAKSSGVKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETFGSW 227
Query: 789 AVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENP 968
AVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIP SG+QL+NIAHVRDLSSMLTLAV NP
Sbjct: 228 AVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVGNP 287
Query: 969 SSSSGKIFNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYA 1148
+++ IFNCVSDRAVTLDG+A+LCAQAAGRPVNI+HYDPKAVG+DAKKAFPFR HFYA
Sbjct: 288 EAANQTIFNCVSDRAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPFRTYHFYA 347
Query: 1149 EPRAAKEILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVVPV 1316
EPRAAK LGW++TTNLPEDLKERFEEYV IGRDKK ++FE+DDKILE+LKV V V
Sbjct: 348 EPRAAKAKLGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403
>ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Capsella rubella]
gi|482559945|gb|EOA24136.1| hypothetical protein
CARUB_v10017370mg [Capsella rubella]
Length = 404
Score = 550 bits (1417), Expect = e-154
Identities = 270/350 (77%), Positives = 296/350 (84%)
Frame = +3
Query: 261 SYPLRLRHTRRLSSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMT 440
+Y LR T FTV AS+ +KK VLIVNTNSGGHAVIGFYFAKELL +GH VT+MT
Sbjct: 53 TYSLRTSRTSSPQRFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMT 112
Query: 441 VGDESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRP 620
VGDESSDKMKKPPF+RFSEIVS G+T FDVVLDNNGKDLDTVRP
Sbjct: 113 VGDESSDKMKKPPFSRFSEIVSAGGKTVWGNPADVANVIGGQTFDVVLDNNGKDLDTVRP 172
Query: 621 VVNWAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFR 800
VV+WAK++GVKQFL+ISSAGIYK T+EPPHVEGD VKADAGHV VEKY+AE FG+WA FR
Sbjct: 173 VVDWAKSSGVKQFLFISSAGIYKSTEEPPHVEGDAVKADAGHVGVEKYLAETFGNWASFR 232
Query: 801 PQYMIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSS 980
PQYMIGSGNNKDCEEWFFDRIVRDR VPIP SG+QLTNI+HVRDLSSMLT AV NP ++
Sbjct: 233 PQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPDAAC 292
Query: 981 GKIFNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRA 1160
IFNCVSDRAVTLDGMA+LCA AAG+ V IVHYDPKA+G+DAKKAFPFRNMHFYAEPRA
Sbjct: 293 CNIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFPFRNMHFYAEPRA 352
Query: 1161 AKEILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
AKEILGW++ TNLPEDLKERFEEYV IGRDKK MKFE+DDKILE+LK V
Sbjct: 353 AKEILGWESKTNLPEDLKERFEEYVKIGRDKKEMKFELDDKILEALKAPV 402
>ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Solanum tuberosum]
Length = 401
Score = 549 bits (1415), Expect = e-153
Identities = 271/338 (80%), Positives = 291/338 (86%)
Frame = +3
Query: 297 SSFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGDESSDKMKKP 476
S+ V AS +KKKVLIVNTNSGGHAVIGFYFAKELLGSGH+VTV+TVG+ESSDKMKK
Sbjct: 62 STTVVQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTVLTVGEESSDKMKKT 121
Query: 477 PFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVNWAKNAGVKQ 656
PF RFSEI GRT FD VLDNNGKDLD+V PV +WAK++GVKQ
Sbjct: 122 PFTRFSEITGAGGRTVWGNPADVGKILEGEVFDAVLDNNGKDLDSVSPVADWAKSSGVKQ 181
Query: 657 FLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQYMIGSGNNKD 836
FL+ISSAGIYKPTDEPPHVEGD VKADAGHV VEKYI+EIFGSWA FRPQYMIGSGNNKD
Sbjct: 182 FLFISSAGIYKPTDEPPHVEGDAVKADAGHVLVEKYISEIFGSWASFRPQYMIGSGNNKD 241
Query: 837 CEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKIFNCVSDRAV 1016
CEEWFFDRIVR RPV IP SGMQLTNI+HVRDLSSMLTLAV+NP+++SG IFNCVSDRAV
Sbjct: 242 CEEWFFDRIVRGRPVLIPGSGMQLTNISHVRDLSSMLTLAVQNPAAASGHIFNCVSDRAV 301
Query: 1017 TLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKEILGWKNTTN 1196
TLDGMARLCA+AAG V IVHYDPKAVG+DAKKAFPFRNMHFYAEPRAA EILGW TTN
Sbjct: 302 TLDGMARLCAKAAGSSVEIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAANEILGWSATTN 361
Query: 1197 LPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
LPEDLKER+EEYV IGRDKK MKFE+DDKILESLKV V
Sbjct: 362 LPEDLKERYEEYVKIGRDKKEMKFELDDKILESLKVPV 399
>gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
Length = 405
Score = 549 bits (1415), Expect = e-153
Identities = 275/354 (77%), Positives = 301/354 (85%), Gaps = 3/354 (0%)
Frame = +3
Query: 258 VSYPLRLRHTRRLSSF---TVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEV 428
++YP ++RR S+F TV ASA +KKK VLIVNTNSGGHAVIGFYFAKELLGSGH+V
Sbjct: 53 LAYPTT--NSRRFSTFQYFTVQASAAEKKK-VLIVNTNSGGHAVIGFYFAKELLGSGHDV 109
Query: 429 TVMTVGDESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLD 608
T++TVG+ESSDKMKK PFNRFSEI GRT FD VLDNNGKDLD
Sbjct: 110 TILTVGEESSDKMKKTPFNRFSEITGAGGRTIWGDPADVGKILEGEVFDAVLDNNGKDLD 169
Query: 609 TVRPVVNWAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSW 788
VRPV +WAK++G KQFL+ISSAGIYK TDEPPHVEGD VKADAGHV VEKYI+EIF SW
Sbjct: 170 AVRPVADWAKSSGAKQFLFISSAGIYKSTDEPPHVEGDAVKADAGHVGVEKYISEIFDSW 229
Query: 789 AVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENP 968
A FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIP SGMQLTNIAHVRDLSSMLT AV+NP
Sbjct: 230 ASFRPQYMIGSGNNKDCEEWFFDRIVRGRPVPIPGSGMQLTNIAHVRDLSSMLTAAVQNP 289
Query: 969 SSSSGKIFNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYA 1148
+++SG IFNCVSDRAVTLDGMA+LCA+AAG V IVHYDPKAVG+DAKKAFPFRNMHFY+
Sbjct: 290 AAASGHIFNCVSDRAVTLDGMAKLCAKAAGFSVEIVHYDPKAVGVDAKKAFPFRNMHFYS 349
Query: 1149 EPRAAKEILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
EPRAAKEILGW TTNLPEDLKERF+EYV IGRDKK MKFE+DDKILE+LKV V
Sbjct: 350 EPRAAKEILGWSATTNLPEDLKERFDEYVKIGRDKKEMKFELDDKILEALKVPV 403
>ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
gi|75311698|sp|Q9LYA9.1|CP41A_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic; Short=CSP41-a; Flags: Precursor
gi|16226201|gb|AAL16101.1|AF428269_1 AT3g63140/T20O10_240
[Arabidopsis thaliana] gi|7573443|emb|CAB87759.1| mRNA
binding protein precursor-like [Arabidopsis thaliana]
gi|16649035|gb|AAL24369.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|22136252|gb|AAM91204.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|332646919|gb|AEE80440.1| chloroplast stem-loop binding
protein-41 [Arabidopsis thaliana]
Length = 406
Score = 549 bits (1414), Expect = e-153
Identities = 269/347 (77%), Positives = 300/347 (86%), Gaps = 2/347 (0%)
Frame = +3
Query: 276 LRHTRRLS--SFTVNASAEKKKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTVMTVGD 449
LR +RRLS FTV AS+ +KK VLIVNTNSGGHAVIGFYFAKELL +GH VT++TVGD
Sbjct: 58 LRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGD 117
Query: 450 ESSDKMKKPPFNRFSEIVSGNGRTXXXXXXXXXXXXXXXXFDVVLDNNGKDLDTVRPVVN 629
ESS+KMKKPPFNRFSEIVSG G+T FDVVLDNNGKDLDTVRPVV+
Sbjct: 118 ESSEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVD 177
Query: 630 WAKNAGVKQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYIAEIFGSWAVFRPQY 809
WAK++GVKQFL+ISSAGIYK T++PPHVEGD VKADAGHV VEKY+AE FG+WA FRPQY
Sbjct: 178 WAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQY 237
Query: 810 MIGSGNNKDCEEWFFDRIVRDRPVPIPSSGMQLTNIAHVRDLSSMLTLAVENPSSSSGKI 989
MIGSGNNKDCEEWFFDRIVRDR VPIP SG+QLTNI+HVRDLSSMLT AV NP ++SG I
Sbjct: 238 MIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNI 297
Query: 990 FNCVSDRAVTLDGMARLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKE 1169
FNCVSDRAVTLDGMA+LCA AAG+ V IVHYDPKA+G+DAKKAF FRNMHFYAEPRAAK+
Sbjct: 298 FNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKD 357
Query: 1170 ILGWKNTTNLPEDLKERFEEYVNIGRDKKPMKFEIDDKILESLKVVV 1310
+LGW++ TNLPEDLKERFEEYV IGRDKK +KFE+DDKILE+LK V
Sbjct: 358 LLGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 404