BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00000481
         (1431 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007043300.1| Photosystem II stability/assembly factor, ch...   652   0.0  
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   640   0.0  
ref|XP_007222695.1| hypothetical protein PRUPE_ppa006376mg [Prun...   637   e-180
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   635   e-179
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   629   e-177
gb|EXB55168.1| hypothetical protein L484_018094 [Morus notabilis]     627   e-177
ref|XP_006437570.1| hypothetical protein CICLE_v10031672mg [Citr...   627   e-177
ref|XP_004297743.1| PREDICTED: photosystem II stability/assembly...   626   e-177
ref|XP_002520925.1| Photosystem II stability/assembly factor HCF...   625   e-176
gb|AHM26647.1| photosystem II stability/assembly factor protein ...   624   e-176
ref|XP_007131634.1| hypothetical protein PHAVU_011G029800g [Phas...   617   e-174
ref|XP_006847864.1| hypothetical protein AMTR_s00029p00083110 [A...   613   e-173
ref|XP_003607248.1| Photosystem II stability/assembly factor HCF...   608   e-171
ref|XP_002310654.1| hypothetical protein POPTR_0007s07780g [Popu...   607   e-171
ref|XP_006394580.1| hypothetical protein EUTSA_v10004338mg [Eutr...   606   e-171
ref|XP_006354977.1| PREDICTED: photosystem II stability/assembly...   604   e-170
ref|NP_197703.1| photosystem II stability/assembly factor HCF136...   603   e-170
ref|XP_004231481.1| PREDICTED: photosystem II stability/assembly...   603   e-170
ref|XP_004966550.1| PREDICTED: photosystem II stability/assembly...   602   e-169
ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [S...   599   e-168

>ref|XP_007043300.1| Photosystem II stability/assembly factor, chloroplast (HCF136)
            isoform 1 [Theobroma cacao] gi|508707235|gb|EOX99131.1|
            Photosystem II stability/assembly factor, chloroplast
            (HCF136) isoform 1 [Theobroma cacao]
          Length = 411

 Score =  652 bits (1681), Expect = 0.0
 Identities = 329/413 (79%), Positives = 356/413 (86%), Gaps = 6/413 (1%)
 Frame = +2

Query: 86   MGALQLTDSNPITLLKPSLNSSLLARRICRSYRNPQARFLTRASLQH------QQPSSLN 247
            M  LQ++D +    LKPSL S    R + RS   P  R + +ASLQ         P+ +N
Sbjct: 3    MPNLQVSDCSN---LKPSLTSLFSPRFLHRSQTQPHPRLICKASLQQPHHSSSSSPTLVN 59

Query: 248  RRQFITDTAAISLSLAPLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNH 427
            RRQ I+ TA++SLS+A L  LQLPA+SEE  LSEWERVYLPIDPGVVLLDIAFVPDD NH
Sbjct: 60   RRQLISQTASLSLSVATLSALQLPAKSEEV-LSEWERVYLPIDPGVVLLDIAFVPDDPNH 118

Query: 428  GFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTS 607
            GFLLGTRQTILETKDGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTS
Sbjct: 119  GFLLGTRQTILETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTS 178

Query: 608  DAGESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSAT 787
            DAGESWERIPLSAQLPGD+VYIKAT+EKSAEMVTD+GAIYVTSNRG+NW+AAVQETVSAT
Sbjct: 179  DAGESWERIPLSAQLPGDMVYIKATDEKSAEMVTDQGAIYVTSNRGFNWRAAVQETVSAT 238

Query: 788  LNRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARR 967
            LNRTVSSGISGASYYTGTF+TVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAVARR
Sbjct: 239  LNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARR 298

Query: 968  IQNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAG 1147
            IQN+GWRAD              SKGTG+TE+FEEIPVQSRGFGILDVGYRS +EAWAAG
Sbjct: 299  IQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEIPVQSRGFGILDVGYRSMEEAWAAG 358

Query: 1148 GSGILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            GSG+LLRTTNGGK+W+RDKAADNIAANLYSVKFI+D KGFVLGNDGVLLRYLG
Sbjct: 359  GSGVLLRTTNGGKSWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 411


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic [Vitis vinifera]
            gi|297737938|emb|CBI27139.3| unnamed protein product
            [Vitis vinifera]
          Length = 404

 Score =  640 bits (1651), Expect = 0.0
 Identities = 327/412 (79%), Positives = 355/412 (86%), Gaps = 5/412 (1%)
 Frame = +2

Query: 86   MGALQLTD-SNPITLLKPSLNSSLLA---RRICRSYRNPQARFLTRASLQHQQPSSLNRR 253
            M  LQL+D  NP+  LKPSL S  +    R  C + R    R + RA LQ     SL RR
Sbjct: 1    MATLQLSDYCNPVVALKPSLKSFFIKTDHRNCCGASR---VRVVPRACLQKP---SLTRR 54

Query: 254  QFITDTAAISLSLAPLV-GLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHG 430
              + +TAAIS+  APL+ G++ PA+SEE  LSEWERVYLPIDPGVVLLDIAFVPDD +HG
Sbjct: 55   HLLAETAAISV--APLILGIEPPAKSEEPLLSEWERVYLPIDPGVVLLDIAFVPDDLSHG 112

Query: 431  FLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSD 610
            FLLGTRQTI+ETKDGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYTSD
Sbjct: 113  FLLGTRQTIMETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSD 172

Query: 611  AGESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATL 790
            AGESWERIPLSAQLPGDIVYIKAT EKSAEMVTDEGAIYVTSNRGYNW+AAVQETVSATL
Sbjct: 173  AGESWERIPLSAQLPGDIVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATL 232

Query: 791  NRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRI 970
            NRTVSSGISGASYYTGTF+TVNRSPDG+YVAVSSRGNFYLTWEPGQP+WQPHNRAVARRI
Sbjct: 233  NRTVSSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRI 292

Query: 971  QNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGG 1150
            QN+GWRAD              SKGTG++E+FEEIPVQSRGFGILDVGYRSK+EAWAAGG
Sbjct: 293  QNMGWRADGGLWLLVRGGGLYLSKGTGISEDFEEIPVQSRGFGILDVGYRSKEEAWAAGG 352

Query: 1151 SGILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            SG+LLRTTNGGKTW+RDKAADNIAANLYSVKFI+D KGFVLGNDGVLLR+LG
Sbjct: 353  SGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDDTKGFVLGNDGVLLRFLG 404


>ref|XP_007222695.1| hypothetical protein PRUPE_ppa006376mg [Prunus persica]
            gi|462419631|gb|EMJ23894.1| hypothetical protein
            PRUPE_ppa006376mg [Prunus persica]
          Length = 414

 Score =  637 bits (1642), Expect = e-180
 Identities = 320/408 (78%), Positives = 349/408 (85%), Gaps = 4/408 (0%)
 Frame = +2

Query: 95   LQLTD--SNPITLLKPSLNSSLLARRICRSYRNPQARFLTRASLQHQQPSSLNRRQFITD 268
            LQLT   S PI ++KPSL  +   R    S   P+   + RAS      S ++RR F+++
Sbjct: 7    LQLTTDLSKPIIVVKPSLEFASTPRHCRTSLSLPRFNNIARASSSSSDSSLVSRRHFVSE 66

Query: 269  TAAISLSLA--PLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLG 442
            TAA+SL+L   PL G   PA+SEE+ LSEWE+V LPIDPGVVLLDIAFVP+D  HGFLLG
Sbjct: 67   TAALSLTLTTLPLFGSIQPAKSEESALSEWEKVSLPIDPGVVLLDIAFVPEDPKHGFLLG 126

Query: 443  TRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 622
            TRQTILETKDGG+TW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILL+TSD+G S
Sbjct: 127  TRQTILETKDGGDTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLHTSDSGNS 186

Query: 623  WERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTV 802
            WERIPLS+QLPGD+VYIKAT EKSAEMVTDEGAIY+TSNRGYNWKAAVQETVSATLNRTV
Sbjct: 187  WERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGYNWKAAVQETVSATLNRTV 246

Query: 803  SSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIG 982
            SSGISGASYYTGTF++VNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNR VARRIQN+G
Sbjct: 247  SSGISGASYYTGTFNSVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRTVARRIQNMG 306

Query: 983  WRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGIL 1162
            WRAD              SKGTGLTEEFEE+PVQSRGFGILDVGYRSKDEAWAAGGSGIL
Sbjct: 307  WRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGIL 366

Query: 1163 LRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            LRTTNGGKTW+RDKAADNIAANLYSVKFI+D+ GFVLGNDGVLLRYLG
Sbjct: 367  LRTTNGGKTWTRDKAADNIAANLYSVKFIDDSTGFVLGNDGVLLRYLG 414


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  635 bits (1637), Expect = e-179
 Identities = 320/401 (79%), Positives = 347/401 (86%), Gaps = 7/401 (1%)
 Frame = +2

Query: 125  LLKPSLNSSLLARRICRSYRNPQARFLTRASLQHQQP------SSLNRRQFITDTAA-IS 283
            LLKPS  SSL A      +   Q + L R +L    P      SS+NRR F+ DTAA +S
Sbjct: 8    LLKPSWTSSLFASSTSPRHSLSQPQLLPR-TLSSTTPKASLHNSSINRRHFVADTAAAVS 66

Query: 284  LSLAPLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLGTRQTILE 463
            LSL+P +    PA+SEE+ LSEWER+YLPIDPGVVLLDIAFVPDD NHGFLLGTRQTILE
Sbjct: 67   LSLSPFIAPVQPAKSEES-LSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLLGTRQTILE 125

Query: 464  TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLS 643
            TKDGG TWAPRSIPSAE+EDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLS
Sbjct: 126  TKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLS 185

Query: 644  AQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGA 823
            AQLPGD+VYIKAT EKSAEMVTDEGAIYVTSN+GYNWKAAVQETVSATLNRTVSSGISGA
Sbjct: 186  AQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGA 245

Query: 824  SYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIGWRADXXX 1003
            SYYTGTF+TVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRA+ARRIQN+GWRAD   
Sbjct: 246  SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGL 305

Query: 1004 XXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGG 1183
                       SKGTG++EEFEE+PVQSRGFGILDVGYRSK+EAWAAGGSG+LL+TTNGG
Sbjct: 306  WLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGG 365

Query: 1184 KTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            ++W+RDKAADNIAANLYSVKFIND KGFVLGNDGVLL+YLG
Sbjct: 366  RSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  629 bits (1622), Expect = e-177
 Identities = 321/407 (78%), Positives = 345/407 (84%)
 Frame = +2

Query: 86   MGALQLTDSNPITLLKPSLNSSLLARRICRSYRNPQARFLTRASLQHQQPSSLNRRQFIT 265
            M  L+LT S+  TL +PSL S+    R            + +AS      S  +RR+FI 
Sbjct: 1    MATLRLTFSDSTTLFRPSLPSTRTFSR--------NRSLIVKASSSEDDFSRSSRRRFIA 52

Query: 266  DTAAISLSLAPLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLGT 445
            +TAA+S+SL      QL ARSE+A LSEWERVYLPIDPGVVLLDIAFVPDD NHGFLLGT
Sbjct: 53   ETAALSVSLP-----QLTARSEDA-LSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGT 106

Query: 446  RQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW 625
            RQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYTSDAG+SW
Sbjct: 107  RQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSW 166

Query: 626  ERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVS 805
            ERIPLSA+LPGD+VYIKAT EKSAEMVTDEGAIYVT+NRGYNW+AAVQETVSATLNRTVS
Sbjct: 167  ERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVS 226

Query: 806  SGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIGW 985
            SGISGASYYTGTF+TVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQN+GW
Sbjct: 227  SGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGW 286

Query: 986  RADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILL 1165
            RAD              SKG GLTEEFEE+PVQSRGFGILDVGYRS DEAWAAGGSGILL
Sbjct: 287  RADGGLWLLVRGGGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILL 346

Query: 1166 RTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            RTTNGGK+W RDKAADNIAANLYSVKFI++ KGFVLGNDGVLLRYLG
Sbjct: 347  RTTNGGKSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


>gb|EXB55168.1| hypothetical protein L484_018094 [Morus notabilis]
          Length = 415

 Score =  627 bits (1618), Expect = e-177
 Identities = 324/412 (78%), Positives = 349/412 (84%), Gaps = 8/412 (1%)
 Frame = +2

Query: 95   LQLTD-SNPITLLKPSLNSSLLARRIC-RSYRN--PQARFLTRASLQHQQPSS---LNRR 253
            LQL D S P+ LLKPS  S         R +R+  P  RF+ +AS      SS   L RR
Sbjct: 5    LQLPDCSKPVILLKPSFTSLFFNNTTSPRHFRSSQPPPRFIPKASSSSSSSSSSSLLCRR 64

Query: 254  QFITDTAAISLSLA-PLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHG 430
            +FI +TAA+SLSLA P +G   PA+SE+A LSEWER YLPIDPGVVLLDIAFVPDD NHG
Sbjct: 65   RFIAETAAVSLSLASPFLGPVQPAKSEDA-LSEWERCYLPIDPGVVLLDIAFVPDDLNHG 123

Query: 431  FLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSD 610
            FLLGTRQTILETKDGGNTW PRSIPSAEDEDFNYRFNSISF GKEGWIVGKPAILLYTSD
Sbjct: 124  FLLGTRQTILETKDGGNTWVPRSIPSAEDEDFNYRFNSISFIGKEGWIVGKPAILLYTSD 183

Query: 611  AGESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATL 790
            AGE+WERI LSAQLPGD+VYIKAT EK AEMVTD+GAIYVTSN+GYNW+AAVQETVSATL
Sbjct: 184  AGENWERIALSAQLPGDMVYIKATGEKGAEMVTDQGAIYVTSNKGYNWRAAVQETVSATL 243

Query: 791  NRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRI 970
            NRTVSSGISGASYYTGTF+TVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAVARRI
Sbjct: 244  NRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRI 303

Query: 971  QNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGG 1150
            QN+GWRAD              SKGTG+TE+FEE+ VQSRGFGILDVGYRS++EAWAAGG
Sbjct: 304  QNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEVAVQSRGFGILDVGYRSQEEAWAAGG 363

Query: 1151 SGILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            SGILLRTTNGGK+W RDKAADNIAANLYSVKFI+D KGFVLGNDGVLLRYLG
Sbjct: 364  SGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 415


>ref|XP_006437570.1| hypothetical protein CICLE_v10031672mg [Citrus clementina]
            gi|567890101|ref|XP_006437571.1| hypothetical protein
            CICLE_v10031672mg [Citrus clementina]
            gi|568862130|ref|XP_006484542.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            isoform X1 [Citrus sinensis]
            gi|568862132|ref|XP_006484543.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            isoform X2 [Citrus sinensis] gi|557539766|gb|ESR50810.1|
            hypothetical protein CICLE_v10031672mg [Citrus
            clementina] gi|557539767|gb|ESR50811.1| hypothetical
            protein CICLE_v10031672mg [Citrus clementina]
          Length = 415

 Score =  627 bits (1616), Expect = e-177
 Identities = 321/413 (77%), Positives = 354/413 (85%), Gaps = 11/413 (2%)
 Frame = +2

Query: 101  LTDSNPITLLKPSLNSSLLARRICRSYRNPQA-RFLTRA-------SLQHQQPSSLNRRQ 256
            L  S PI L+KPSL SSL A R+ R+    Q  RF++ +       S      SSL+RRQ
Sbjct: 5    LRPSEPIMLVKPSL-SSLFAPRLSRANAQAQQPRFISTSRACSLPSSDSSSSSSSLSRRQ 63

Query: 257  FITDTAAISLS--LAPLVGL-QLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNH 427
            F++ TA +SLS  LA   GL + PA+SEEA LS WERVY+P+DPGVVLLDIAFVPDD NH
Sbjct: 64   FVSQTATLSLSISLAATTGLYEQPAKSEEA-LSAWERVYIPVDPGVVLLDIAFVPDDLNH 122

Query: 428  GFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTS 607
            GFLLGTRQT+LETKDGG TWAPRSIPSAE+EDFNYRFNSISFKGKEGWIVGKPAILL+TS
Sbjct: 123  GFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTS 182

Query: 608  DAGESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSAT 787
            DAGESWERIPLS+QLPGD+VYIKAT EKSAEMVTDEGAIY+TSNRGYNW+AAVQETVSAT
Sbjct: 183  DAGESWERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGYNWRAAVQETVSAT 242

Query: 788  LNRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARR 967
            LNRTVSSGISGASYYTGTF+TVNRSPDG+YVAVSSRGNFYLTW+PGQ FWQPHNRAVARR
Sbjct: 243  LNRTVSSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWQPGQAFWQPHNRAVARR 302

Query: 968  IQNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAG 1147
            IQN+GWRAD              SKGTG+TEEFEE+PVQSRGFGILDVGYRS+DEAWAAG
Sbjct: 303  IQNMGWRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAG 362

Query: 1148 GSGILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            GSG+LL+TTNGGKTW R+KAADNIAANLYSVKFIN+ KGFVLGNDGVLL+YLG
Sbjct: 363  GSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 415


>ref|XP_004297743.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 406

 Score =  626 bits (1614), Expect = e-177
 Identities = 314/401 (78%), Positives = 346/401 (86%), Gaps = 2/401 (0%)
 Frame = +2

Query: 110  SNPITLLKPSLNSSLLARRICRSYRNPQARFLTRASLQHQQPSSLNRRQFITDTAAISLS 289
            SNP+ LLKPSL S  ++         P   F T +  +    +SL RR  ++DTAA+SL+
Sbjct: 14   SNPMLLLKPSLTSLFVS--------TPPRHFPTTSLPRFIPRASLTRRHLVSDTAALSLA 65

Query: 290  LA-PLVGLQ-LPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLGTRQTILE 463
            L  PL+G   LPA+SEE  LSEWE+V LPIDPGVVLLDIAFVPDD  HGFLLGTRQT+LE
Sbjct: 66   LTVPLLGSSALPAKSEEPALSEWEKVSLPIDPGVVLLDIAFVPDDPKHGFLLGTRQTLLE 125

Query: 464  TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLS 643
            TKDGG +WAPRSIPSAEDEDFNYRFN+ISFKGKEGWIVGKPAILL+TSDAG+SWERIPLS
Sbjct: 126  TKDGGQSWAPRSIPSAEDEDFNYRFNAISFKGKEGWIVGKPAILLHTSDAGDSWERIPLS 185

Query: 644  AQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGA 823
            +QLPGD+VYIKAT +KSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGA
Sbjct: 186  SQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGA 245

Query: 824  SYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIGWRADXXX 1003
            SYYTGTF+ VNRSPDG+YVAVSSRGNF+LTWEPGQP+WQPHNR+VARRIQN+GWRAD   
Sbjct: 246  SYYTGTFNAVNRSPDGSYVAVSSRGNFFLTWEPGQPYWQPHNRSVARRIQNMGWRADGGL 305

Query: 1004 XXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGG 1183
                       SKGTG+TEEFEE+PVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGG
Sbjct: 306  WLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGG 365

Query: 1184 KTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            K+W RDKAADNIAANLYSVKFI+DN+GFVLGNDGVLLRYLG
Sbjct: 366  KSWVRDKAADNIAANLYSVKFIDDNQGFVLGNDGVLLRYLG 406


>ref|XP_002520925.1| Photosystem II stability/assembly factor HCF136, chloroplast
            precursor, putative [Ricinus communis]
            gi|223539891|gb|EEF41470.1| Photosystem II
            stability/assembly factor HCF136, chloroplast precursor,
            putative [Ricinus communis]
          Length = 397

 Score =  625 bits (1612), Expect = e-176
 Identities = 313/383 (81%), Positives = 341/383 (89%), Gaps = 5/383 (1%)
 Frame = +2

Query: 173  RSYRNPQARFLTRASLQH---QQPSSLNRRQFITDTAAISLSL--APLVGLQLPARSEEA 337
            +S+ + Q+RF+ +ASL +       SLNRRQF++ TA +SL L  +PL+ +Q PA +EE 
Sbjct: 17   KSHSHSQSRFVPKASLNNVHLPHHHSLNRRQFLSQTATVSLPLLSSPLI-IQQPANAEET 75

Query: 338  PLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLGTRQTILETKDGGNTWAPRSIPSAED 517
             LSEWERVYLP DPGVVLLDIAFVPDD NHGFLLGTRQTILETKDGGNTW  RSIPSAED
Sbjct: 76   -LSEWERVYLPSDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGGNTWVSRSIPSAED 134

Query: 518  EDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDIVYIKATEEKSA 697
            EDFNYRFNSISFKGKEGWIVGKPAILLYTSDAG+SW+RIPLSAQLPGD+VYIKAT EKSA
Sbjct: 135  EDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGDSWQRIPLSAQLPGDMVYIKATGEKSA 194

Query: 698  EMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGNY 877
            EMVTD+GAIY+TSN GYNW+AAVQETVSATLNRTVSSGISGASYYTGTF+TVNRSPDGNY
Sbjct: 195  EMVTDQGAIYITSNGGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNY 254

Query: 878  VAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIGWRADXXXXXXXXXXXXXXSKGTGLT 1057
            VAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQN+GWRAD              SKGTG++
Sbjct: 255  VAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGIS 314

Query: 1058 EEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSRDKAADNIAANLYS 1237
            E+FEEI VQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTW+RDKAAD+IAANLYS
Sbjct: 315  EDFEEISVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWTRDKAADSIAANLYS 374

Query: 1238 VKFINDNKGFVLGNDGVLLRYLG 1306
            VKFIND+KGFVLGNDGVLLRYLG
Sbjct: 375  VKFINDSKGFVLGNDGVLLRYLG 397


>gb|AHM26647.1| photosystem II stability/assembly factor protein [Pyrus x
            bretschneideri]
          Length = 408

 Score =  624 bits (1608), Expect = e-176
 Identities = 315/408 (77%), Positives = 344/408 (84%), Gaps = 4/408 (0%)
 Frame = +2

Query: 95   LQLTD--SNPITLLKPSLNSSLLARRICRSYRNPQARFLTRASLQHQQPSSLNRRQFITD 268
            LQLT   S P   LKPSL  +   R    S   P      RAS      S ++RR F+++
Sbjct: 7    LQLTTDFSKPTIHLKPSLEFATTPRHFRTSLSIP------RASSSSSDSSLVSRRHFVSE 60

Query: 269  TAAISLSLA--PLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLG 442
            TAA+SLSL   PL G  LPA++E+  LSEWE+V LPIDPGVVLLDIAFVP+D  HGFLLG
Sbjct: 61   TAALSLSLTTLPLFGSVLPAKAEDPALSEWEKVSLPIDPGVVLLDIAFVPEDPKHGFLLG 120

Query: 443  TRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 622
            TRQT+LETKDGG TW PRSIPSAEDEDFNYRFN+ISFKGKEGWIVGKPAILL+TSD+G+S
Sbjct: 121  TRQTLLETKDGGETWVPRSIPSAEDEDFNYRFNAISFKGKEGWIVGKPAILLHTSDSGDS 180

Query: 623  WERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTV 802
            WERIPLS+QLPGD+VYIKAT EKSAEMVTDEGAIYVTSNRGYNW+AAVQETVSATLNRTV
Sbjct: 181  WERIPLSSQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTV 240

Query: 803  SSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIG 982
            SSGISGASYYTGTF++VNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNR VARRIQN+G
Sbjct: 241  SSGISGASYYTGTFNSVNRSPDGKYVAVSSRGNFYLTWEPGQPYWQPHNRTVARRIQNMG 300

Query: 983  WRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGIL 1162
            WRAD              SKGTGLTE+FEE+PVQSRGFGILDVGYRSKDEAWAAGGSGIL
Sbjct: 301  WRADGGLWLLVRGGGLYLSKGTGLTEDFEEVPVQSRGFGILDVGYRSKDEAWAAGGSGIL 360

Query: 1163 LRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            L+TTNGGKTW+RDKAADNIAANLYSVKFI+D KGFVLGNDGVLLRYLG
Sbjct: 361  LQTTNGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 408


>ref|XP_007131634.1| hypothetical protein PHAVU_011G029800g [Phaseolus vulgaris]
            gi|561004634|gb|ESW03628.1| hypothetical protein
            PHAVU_011G029800g [Phaseolus vulgaris]
          Length = 395

 Score =  617 bits (1591), Expect = e-174
 Identities = 314/408 (76%), Positives = 344/408 (84%), Gaps = 1/408 (0%)
 Frame = +2

Query: 86   MGALQLTDSNPITLLKPSLNSSLLARRICRSY-RNPQARFLTRASLQHQQPSSLNRRQFI 262
            M  LQ T ++  +L +PSL SS       R++ RN        +S       S +RR+F+
Sbjct: 1    MATLQFTFTDSTSLFRPSLPSS-------RTFPRNRSLVVKASSSSSSSDDISRSRRRFL 53

Query: 263  TDTAAISLSLAPLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLG 442
             +T AIS+SL       L AR+E+  LSEWERVYLPIDPGVVLLDI+FVPDD NHGFLLG
Sbjct: 54   AETTAISVSLP-----HLAARAEDT-LSEWERVYLPIDPGVVLLDISFVPDDPNHGFLLG 107

Query: 443  TRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 622
            TRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKG+EGWIVGKPAILLYT+DAG+S
Sbjct: 108  TRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGREGWIVGKPAILLYTADAGDS 167

Query: 623  WERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTV 802
            WERIPLSA+LPGD+VYIKAT EKSAEMVTDEGAIYVT+NRGYNW+AAVQETVSATLNRTV
Sbjct: 168  WERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTV 227

Query: 803  SSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIG 982
            SSGISGASYYTGTF+TVNRSP+G YVAVSSRGNFYLTWEPGQP+WQPHNRAVARRIQN+G
Sbjct: 228  SSGISGASYYTGTFNTVNRSPEGKYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMG 287

Query: 983  WRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGIL 1162
            WRAD              SKGTGLTEEFEE+PVQSRGFGILDVGYRS +EAWAAGGSGIL
Sbjct: 288  WRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSTEEAWAAGGSGIL 347

Query: 1163 LRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            LRTTNGGK+W RDKAADNIAANLYSVKFI+D KGFVLGNDGVLLRYLG
Sbjct: 348  LRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 395


>ref|XP_006847864.1| hypothetical protein AMTR_s00029p00083110 [Amborella trichopoda]
            gi|548851169|gb|ERN09445.1| hypothetical protein
            AMTR_s00029p00083110 [Amborella trichopoda]
          Length = 412

 Score =  613 bits (1581), Expect = e-173
 Identities = 312/396 (78%), Positives = 338/396 (85%), Gaps = 20/396 (5%)
 Frame = +2

Query: 179  YRNPQAR-------FLTRASLQHQQP-------------SSLNRRQFITDTAAISLSLAP 298
            Y+ PQA        FLTR+   H QP             +SL+RR F+++TAAIS++L  
Sbjct: 20   YKKPQASKMVIRSVFLTRSG--HCQPPRAQLGEPRSQNLASLSRRLFLSETAAISVALPS 77

Query: 299  LVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLGTRQTILETKDGG 478
            LV  +  A++++  LSEWERVYLPIDPGVVLLDIAFVPD+ NHGFLLGTRQTILETKDGG
Sbjct: 78   LVRFEGEAKADDG-LSEWERVYLPIDPGVVLLDIAFVPDELNHGFLLGTRQTILETKDGG 136

Query: 479  NTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPG 658
            NTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTS+AGESWERIPLS QLPG
Sbjct: 137  NTWFPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSNAGESWERIPLSNQLPG 196

Query: 659  DIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTG 838
            D+VYIKAT EKSAEMVTD+GAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTG
Sbjct: 197  DMVYIKATGEKSAEMVTDQGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTG 256

Query: 839  TFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIGWRADXXXXXXXX 1018
            TF+TVNRSPDGNYVAVSSRGNFYLTWEPGQP+WQPHNRA ARRIQN+GWRAD        
Sbjct: 257  TFNTVNRSPDGNYVAVSSRGNFYLTWEPGQPYWQPHNRAAARRIQNMGWRADGGLWLLVR 316

Query: 1019 XXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSR 1198
                  SKGTG+TE+FEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILLRT NGGKTW R
Sbjct: 317  GGGLYLSKGTGITEDFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTMNGGKTWIR 376

Query: 1199 DKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            DKAAD+IAANLYSVKFI++  GFVLGNDGVLLRYLG
Sbjct: 377  DKAADSIAANLYSVKFIDEKTGFVLGNDGVLLRYLG 412


>ref|XP_003607248.1| Photosystem II stability/assembly factor HCF136 [Medicago truncatula]
            gi|355508303|gb|AES89445.1| Photosystem II
            stability/assembly factor HCF136 [Medicago truncatula]
          Length = 396

 Score =  608 bits (1569), Expect = e-171
 Identities = 314/407 (77%), Positives = 338/407 (83%)
 Frame = +2

Query: 86   MGALQLTDSNPITLLKPSLNSSLLARRICRSYRNPQARFLTRASLQHQQPSSLNRRQFIT 265
            M  LQ T S+  T L   L+    ++        P++ F+ +ASL+     S  RRQFI 
Sbjct: 1    MATLQFTFSDSTTTLCRPLSQLPSSKSTIIHSPRPRS-FVVKASLE----PSRTRRQFIA 55

Query: 266  DTAAISLSLAPLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLGT 445
            +T AIS+ L   +     A+SEE  LSEWERVYLPIDPGVVLLDIAFVP D NHGFLLGT
Sbjct: 56   ETTAISVLLPSQL-----AKSEET-LSEWERVYLPIDPGVVLLDIAFVPQDPNHGFLLGT 109

Query: 446  RQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW 625
            RQT+LETKDGG TWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYT DAGESW
Sbjct: 110  RQTLLETKDGGRTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTPDAGESW 169

Query: 626  ERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVS 805
            ERIPLSA+LPGD+VYIKAT EKSAEMVTDEGAIYVTSNRGYNWKAAVQE+VSATLNRTVS
Sbjct: 170  ERIPLSAELPGDMVYIKATNEKSAEMVTDEGAIYVTSNRGYNWKAAVQESVSATLNRTVS 229

Query: 806  SGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIGW 985
            SGISGASYYTGTF+TVNRSPDG YVAVSSRGNFY+TWEPGQ +WQPHNRAVARRIQN+GW
Sbjct: 230  SGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYMTWEPGQAYWQPHNRAVARRIQNMGW 289

Query: 986  RADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILL 1165
            RAD              SKGTG+TEEFEEIPVQSRGFGILDVGYRS DEAWAAGGSGILL
Sbjct: 290  RADGGLWLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGILL 349

Query: 1166 RTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            RT NGGK+W RDKAADNIAANLYSVKFI+D KGFVLGNDGVLLRYLG
Sbjct: 350  RTNNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 396


>ref|XP_002310654.1| hypothetical protein POPTR_0007s07780g [Populus trichocarpa]
            gi|566180140|ref|XP_006380512.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|566180148|ref|XP_006380516.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|222853557|gb|EEE91104.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|550334364|gb|ERP58309.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
            gi|550334368|gb|ERP58313.1| hypothetical protein
            POPTR_0007s07780g [Populus trichocarpa]
          Length = 394

 Score =  607 bits (1564), Expect = e-171
 Identities = 302/381 (79%), Positives = 329/381 (86%), Gaps = 3/381 (0%)
 Frame = +2

Query: 173  RSYRNPQARFLTRASLQHQQPSSLNRRQFITDTAAISLS--LAPLV-GLQLPARSEEAPL 343
            R  + PQ         +  Q   LNRR FI+ TA++S    L+PL+   Q    + E  L
Sbjct: 14   RCLQRPQNSHSPSQQPRLSQRPELNRRHFISQTASLSSLPLLSPLILNPQQANAAAEDSL 73

Query: 344  SEWERVYLPIDPGVVLLDIAFVPDDSNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDED 523
            SEWERVYLPIDPGVVLLDIAFVPDD+NHGFLLGTRQTI+ETKDGGNTW  RSIPSAEDED
Sbjct: 74   SEWERVYLPIDPGVVLLDIAFVPDDTNHGFLLGTRQTIMETKDGGNTWVQRSIPSAEDED 133

Query: 524  FNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDIVYIKATEEKSAEM 703
            FNYRFNSISFKGKEGWIVGKPAILLYT+D+GE+WERIPLSAQLPGD+VYIKAT EKSAEM
Sbjct: 134  FNYRFNSISFKGKEGWIVGKPAILLYTADSGETWERIPLSAQLPGDMVYIKATGEKSAEM 193

Query: 704  VTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGNYVA 883
            VTDEGAIY+TSNRGYNW+AAVQE+VSATLNRTVSSGISGASYYTGTF+TVNRSP+GNYVA
Sbjct: 194  VTDEGAIYITSNRGYNWRAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPNGNYVA 253

Query: 884  VSSRGNFYLTWEPGQPFWQPHNRAVARRIQNIGWRADXXXXXXXXXXXXXXSKGTGLTEE 1063
            VSSRGNFYLTWEPGQ FWQPHNRA+ARRIQN+GWRAD              SKGTG++EE
Sbjct: 254  VSSRGNFYLTWEPGQAFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLYLSKGTGISEE 313

Query: 1064 FEEIPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSRDKAADNIAANLYSVK 1243
            FEEIPVQSRGFGILDVGYRSK+EAWAAGGSG+LLRTTNGGKTW+RDKAADNIAANLYSVK
Sbjct: 314  FEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAADNIAANLYSVK 373

Query: 1244 FINDNKGFVLGNDGVLLRYLG 1306
            FI+D KGFVLGNDGVLLRYLG
Sbjct: 374  FIDDKKGFVLGNDGVLLRYLG 394


>ref|XP_006394580.1| hypothetical protein EUTSA_v10004338mg [Eutrema salsugineum]
            gi|557091219|gb|ESQ31866.1| hypothetical protein
            EUTSA_v10004338mg [Eutrema salsugineum]
          Length = 404

 Score =  606 bits (1563), Expect = e-171
 Identities = 303/414 (73%), Positives = 346/414 (83%), Gaps = 7/414 (1%)
 Frame = +2

Query: 86   MGALQLTDSNPITLLKPSLNSSLLARRICRSYRNPQARFLTRASLQHQQPSS-------L 244
            M +LQL D     L KPS++   L  RI         R + +AS     PSS       L
Sbjct: 1    MASLQLCDG--YLLFKPSVSPRFLPNRISH-------RLIPKASASSPSPSSSSSSSLSL 51

Query: 245  NRRQFITDTAAISLSLAPLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSN 424
            NRRQ +  +AA+SLSL+ + G    A+++E  LSEWERV+LPIDPGVVLLDIAFVPDD +
Sbjct: 52   NRRQLLYQSAAVSLSLSSIFGPVKEAKADEQ-LSEWERVFLPIDPGVVLLDIAFVPDDPS 110

Query: 425  HGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYT 604
             GFLLGTRQT+LETKDGGNTWAPRSIPSAE+EDFNYRFNSISFKGKEGWI+GKPAILLYT
Sbjct: 111  RGFLLGTRQTLLETKDGGNTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYT 170

Query: 605  SDAGESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSA 784
            +DAGE+W+RIPLS+QLPGD+V+I+AT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSA
Sbjct: 171  ADAGENWDRIPLSSQLPGDMVFIEATGDKSAEMVTDEGAIYVTSNKGYNWKAAIQETVSA 230

Query: 785  TLNRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVAR 964
            TLNRTVSSGISGASYYTGTFS VNRSPDG YVAVSSRGNF+LTWEPGQP+WQPHNRAVAR
Sbjct: 231  TLNRTVSSGISGASYYTGTFSAVNRSPDGKYVAVSSRGNFFLTWEPGQPYWQPHNRAVAR 290

Query: 965  RIQNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAA 1144
            RIQN+GWRAD              SKGTG++EEF+E+PVQSRGFGILDVGYRS++EAWAA
Sbjct: 291  RIQNMGWRADGGLWLLVRGGGLYLSKGTGISEEFDEVPVQSRGFGILDVGYRSEEEAWAA 350

Query: 1145 GGSGILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            GGSGILLRT NGGK+W+RDKAADNIAANLY+VKF++D KGFVLGNDGVLLRY+G
Sbjct: 351  GGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 404


>ref|XP_006354977.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Solanum tuberosum]
          Length = 402

 Score =  604 bits (1557), Expect = e-170
 Identities = 294/361 (81%), Positives = 327/361 (90%), Gaps = 4/361 (1%)
 Frame = +2

Query: 236  SSLNRRQFITDTAAISLSLAPLVGLQLP----ARSEEAPLSEWERVYLPIDPGVVLLDIA 403
            +++NRRQ I +TAA +++L PL+G+ L     A++EE PLSEWERV+LPI+PGVVLLDIA
Sbjct: 43   ANINRRQLIAETAA-AIALPPLLGVSLSPIPVAKAEETPLSEWERVFLPINPGVVLLDIA 101

Query: 404  FVPDDSNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGK 583
            FVPDD NHGF+LGTRQTILETKDGG TW PRSI SAE+EDFNYRFNSISFKGKEGWI+GK
Sbjct: 102  FVPDDPNHGFVLGTRQTILETKDGGTTWVPRSIASAEEEDFNYRFNSISFKGKEGWIIGK 161

Query: 584  PAILLYTSDAGESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAA 763
            PAILL+TSDAGE+WERIPLS+QLPGD+VYIKAT E+SAEMVTDEGAIY+TSN+GYNWKAA
Sbjct: 162  PAILLHTSDAGENWERIPLSSQLPGDMVYIKATGEQSAEMVTDEGAIYITSNKGYNWKAA 221

Query: 764  VQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQP 943
            +QETVSATLNRTVSSGISGASYYTGTFSTVNRSPDG YVAVSSRGNFYLTWEPGQ +WQP
Sbjct: 222  IQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 281

Query: 944  HNRAVARRIQNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRS 1123
            HNRAVARRIQ++GWRAD              SKGTGLTE+FEE+ VQSRGFGILDVGYRS
Sbjct: 282  HNRAVARRIQSMGWRADGGLWLLVRGGGLYLSKGTGLTEDFEEVSVQSRGFGILDVGYRS 341

Query: 1124 KDEAWAAGGSGILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYL 1303
            +DEAWAAGGSGILL+TTNGGKTW RDKAADNIAANLYSVKFINDN+GFVLGNDGVLL+YL
Sbjct: 342  QDEAWAAGGSGILLKTTNGGKTWIRDKAADNIAANLYSVKFINDNQGFVLGNDGVLLKYL 401

Query: 1304 G 1306
            G
Sbjct: 402  G 402


>ref|NP_197703.1| photosystem II stability/assembly factor HCF136 [Arabidopsis
            thaliana] gi|6016183|sp|O82660.1|P2SAF_ARATH RecName:
            Full=Photosystem II stability/assembly factor HCF136,
            chloroplastic; Flags: Precursor
            gi|3559807|emb|CAA75723.1| HCF136 protein [Arabidopsis
            thaliana] gi|9759370|dbj|BAB09829.1| photosystem II
            stability/assembly factor HCF136 [Arabidopsis thaliana]
            gi|15010780|gb|AAK74049.1| AT5g23120/MYJ24_11
            [Arabidopsis thaliana] gi|28416529|gb|AAO42795.1|
            At5g23120/MYJ24_11 [Arabidopsis thaliana]
            gi|332005741|gb|AED93124.1| photosystem II
            stability/assembly factor HCF136 [Arabidopsis thaliana]
          Length = 403

 Score =  603 bits (1556), Expect = e-170
 Identities = 306/411 (74%), Positives = 350/411 (85%), Gaps = 4/411 (0%)
 Frame = +2

Query: 86   MGALQLTDSNPITLLKPSLNSSLLARRICRSYRN-PQARFLTRASLQHQQPSS---LNRR 253
            M +LQL D     L KPS++   L++RI  S+R  P+A      S      SS    +RR
Sbjct: 1    MASLQLCDG--YLLFKPSVSPRFLSQRI--SHRLIPKASSSPPPSPSPSSSSSSLSFSRR 56

Query: 254  QFITDTAAISLSLAPLVGLQLPARSEEAPLSEWERVYLPIDPGVVLLDIAFVPDDSNHGF 433
            + +  +AA+SLSL+ +VG   PAR++E  LSEWERV+LPIDPGVVLLDIAFVPD+ + GF
Sbjct: 57   ELLYQSAAVSLSLSSIVG---PARADEQ-LSEWERVFLPIDPGVVLLDIAFVPDEPSRGF 112

Query: 434  LLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDA 613
            LLGTRQT+LETKDGG+TW PRSIPSAE+EDFNYRFNSISFKGKEGWI+GKPAILLYT+DA
Sbjct: 113  LLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADA 172

Query: 614  GESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLN 793
            GE+W+RIPLS+QLPGD+V+IKATE+KSAEMVTDEGAIYVTSNRGYNWKAA+QETVSATLN
Sbjct: 173  GENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 232

Query: 794  RTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQ 973
            RTVSSGISGASYYTGTFS VNRSPDG YVAVSSRGNF+LTWEPGQP+WQPHNRAVARRIQ
Sbjct: 233  RTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQ 292

Query: 974  NIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGYRSKDEAWAAGGS 1153
            N+GWRAD              SKGTG+TEEFEE+PVQSRGFGILDVGYRS++EAWAAGGS
Sbjct: 293  NMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGS 352

Query: 1154 GILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLRYLG 1306
            GILLRT NGGK+W+RDKAADNIAANLY+VKF++D KGFVLGNDGVLLRY+G
Sbjct: 353  GILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403


>ref|XP_004231481.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Solanum lycopersicum]
          Length = 406

 Score =  603 bits (1554), Expect = e-170
 Identities = 296/363 (81%), Positives = 327/363 (90%), Gaps = 6/363 (1%)
 Frame = +2

Query: 236  SSLNRRQFITDTAAISLSLAPLVGL-----QLP-ARSEEAPLSEWERVYLPIDPGVVLLD 397
            +++NRRQ I DTAA ++ L PL+G+      LP A++E+ PLSEWERV+LPIDPGVVLLD
Sbjct: 45   ANINRRQLIADTAA-AIILPPLLGVGVSLSPLPVAKAEDTPLSEWERVFLPIDPGVVLLD 103

Query: 398  IAFVPDDSNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIV 577
            IAFVPDD NHGF+LGTRQTILETKDGG TW PRSI SAE+EDFNYRFNSISFKGKEGWI+
Sbjct: 104  IAFVPDDPNHGFVLGTRQTILETKDGGTTWVPRSIASAEEEDFNYRFNSISFKGKEGWII 163

Query: 578  GKPAILLYTSDAGESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRGYNWK 757
            GKPAILL+TSDAGE+WERIPLS+QLPGD+VYIKAT E+SAEMVTDEGAIY+TSN+GYNWK
Sbjct: 164  GKPAILLHTSDAGENWERIPLSSQLPGDMVYIKATGEQSAEMVTDEGAIYITSNKGYNWK 223

Query: 758  AAVQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPGQPFW 937
            AA+QETVSATLNRTVSSGISGASYYTGTFSTVNRSPDG YVAVSSRGNFYLTWEPGQ +W
Sbjct: 224  AAIQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGRYVAVSSRGNFYLTWEPGQAYW 283

Query: 938  QPHNRAVARRIQNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGILDVGY 1117
            QPHNRAVARRIQ++GWRAD              SKGTGLTE+FEE+ VQSRGFGILDVGY
Sbjct: 284  QPHNRAVARRIQSMGWRADGGLWLLVRGGGLYLSKGTGLTEDFEEVSVQSRGFGILDVGY 343

Query: 1118 RSKDEAWAAGGSGILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDGVLLR 1297
            RS+DEAWAAGGSGILL+TTNGGKTW RDKAADNIAANLYSVKFINDN+GFVLGNDGVLL+
Sbjct: 344  RSQDEAWAAGGSGILLKTTNGGKTWIRDKAADNIAANLYSVKFINDNQGFVLGNDGVLLK 403

Query: 1298 YLG 1306
            YLG
Sbjct: 404  YLG 406


>ref|XP_004966550.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Setaria italica]
          Length = 395

 Score =  602 bits (1553), Expect = e-169
 Identities = 299/367 (81%), Positives = 330/367 (89%), Gaps = 6/367 (1%)
 Frame = +2

Query: 224  HQQPSSLNRRQFITDTAAISLSLAPLVGLQLP-----ARSEEAP-LSEWERVYLPIDPGV 385
            +  P++++RR+FI  TAA + ++APLV   LP     AR+++AP LSEWERV+LPIDPGV
Sbjct: 33   NSDPTAVDRRRFIAHTAAAA-AVAPLV---LPRWTPTARADDAPALSEWERVFLPIDPGV 88

Query: 386  VLLDIAFVPDDSNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKE 565
            VLLDIAFVPDD +HGFLLGTRQTILETKDGGNTW PRSIPSAEDEDFNYRFNS+SFKGKE
Sbjct: 89   VLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWFPRSIPSAEDEDFNYRFNSVSFKGKE 148

Query: 566  GWIVGKPAILLYTSDAGESWERIPLSAQLPGDIVYIKATEEKSAEMVTDEGAIYVTSNRG 745
            GWI+GKPAILL+TS+AGESWERIPLSAQLPG++VYIKAT E+SAEMVTDEGAIYVTSNRG
Sbjct: 149  GWIIGKPAILLHTSNAGESWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNRG 208

Query: 746  YNWKAAVQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSSRGNFYLTWEPG 925
            YNWKAAVQETVSATLNRTVSSGISGASYYTGTF+TVNRSPDG YVAVSSRGNFYLTWEPG
Sbjct: 209  YNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG 268

Query: 926  QPFWQPHNRAVARRIQNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEEIPVQSRGFGIL 1105
            QPFWQPHNRAVARRIQN+GWRAD              SKGTG+TE+FEE+ VQSRGFGIL
Sbjct: 269  QPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEVQVQSRGFGIL 328

Query: 1106 DVGYRSKDEAWAAGGSGILLRTTNGGKTWSRDKAADNIAANLYSVKFINDNKGFVLGNDG 1285
            DVGYRS+DEAWAAGGSG+LL+TTNGGK W RDKAADNIAANLYSVKF++D KGFVLGNDG
Sbjct: 329  DVGYRSQDEAWAAGGSGVLLKTTNGGKNWVRDKAADNIAANLYSVKFLDDRKGFVLGNDG 388

Query: 1286 VLLRYLG 1306
            VLLRYLG
Sbjct: 389  VLLRYLG 395


>ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [Sorghum bicolor]
            gi|241917298|gb|EER90442.1| hypothetical protein
            SORBIDRAFT_10g031120 [Sorghum bicolor]
          Length = 397

 Score =  599 bits (1544), Expect = e-168
 Identities = 301/378 (79%), Positives = 334/378 (88%), Gaps = 9/378 (2%)
 Frame = +2

Query: 200  FLTRASLQHQQP---SSLNRRQFITDTAAISLSLAPLVGLQLP-----ARSEEAP-LSEW 352
            F+ RA+     P   +S++RR+FI  TAA + +++PLV   LP     AR++ AP LSEW
Sbjct: 24   FVPRAAHSESTPPGAASVDRRRFIAHTAAAA-AVSPLV---LPRWTPAARADGAPALSEW 79

Query: 353  ERVYLPIDPGVVLLDIAFVPDDSNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNY 532
            ERV+LPIDPGVVLLDIAFVPDD +HGFLLGTRQTILETKDGGNTW PRSIPSAEDEDFNY
Sbjct: 80   ERVFLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWFPRSIPSAEDEDFNY 139

Query: 533  RFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDIVYIKATEEKSAEMVTD 712
            RFNS+SFKGKEGWI+GKPAILL+TSDAGESWERIPLSAQLPG++VYIKAT E+SAEMVTD
Sbjct: 140  RFNSVSFKGKEGWIIGKPAILLHTSDAGESWERIPLSAQLPGNMVYIKATGEQSAEMVTD 199

Query: 713  EGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGNYVAVSS 892
            EGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTF+TVNRSPDG YVAVSS
Sbjct: 200  EGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSS 259

Query: 893  RGNFYLTWEPGQPFWQPHNRAVARRIQNIGWRADXXXXXXXXXXXXXXSKGTGLTEEFEE 1072
            RGNFYLTWEPGQPFWQPHNRAVARRIQN+GWRAD              SKGTG++E+FEE
Sbjct: 260  RGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEDFEE 319

Query: 1073 IPVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWSRDKAADNIAANLYSVKFIN 1252
            + VQSRGFGILDVGYRS++EAWAAGGSG+LL+TTNGGK W RDKAADNIAANLYSVKF++
Sbjct: 320  VQVQSRGFGILDVGYRSQEEAWAAGGSGVLLKTTNGGKNWVRDKAADNIAANLYSVKFLD 379

Query: 1253 DNKGFVLGNDGVLLRYLG 1306
            D+KGFVLGNDGVLLRYLG
Sbjct: 380  DSKGFVLGNDGVLLRYLG 397