BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00000162
         (3332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...  1374   0.0  
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1332   0.0  
ref|XP_007010651.1| DNA gyrase subunit A [Theobroma cacao] gi|50...  1324   0.0  
ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1319   0.0  
ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1316   0.0  
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...  1313   0.0  
ref|XP_007153283.1| hypothetical protein PHAVU_003G022300g [Phas...  1313   0.0  
ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1311   0.0  
ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1308   0.0  
ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1308   0.0  
ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1308   0.0  
gb|EYU26907.1| hypothetical protein MIMGU_mgv1a000966mg [Mimulus...  1306   0.0  
ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1303   0.0  
ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus...  1301   0.0  
ref|XP_006347707.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1297   0.0  
ref|XP_006347706.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1296   0.0  
ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [A...  1295   0.0  
ref|XP_006296680.1| hypothetical protein CARUB_v10012909mg [Caps...  1263   0.0  
ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana] gi|...  1260   0.0  
ref|XP_002884807.1| DNA gyrase subunit A family protein [Arabido...  1259   0.0  

>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score = 1374 bits (3557), Expect = 0.0
 Identities = 691/843 (81%), Positives = 776/843 (92%), Gaps = 3/843 (0%)
 Frame = -3

Query: 2895 SLVLKERNGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHE 2716
            SLVLKE++GRDG+IVP ELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHE
Sbjct: 67   SLVLKEKDGRDGRIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHE 126

Query: 2715 LGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDA 2536
            LGLSSRKP+KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+RCPLIQGHGNFGS+DA
Sbjct: 127  LGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGNFGSVDA 186

Query: 2535 DPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSG 2356
            DPPAAMRYTECRL ALTEA+LL DL QDTVDF+PNFDNSQKEPSLLPAR+PTLLLNGSSG
Sbjct: 187  DPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPSLLPARLPTLLLNGSSG 246

Query: 2355 IAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAY 2176
            IAVGMATNIPPHN+GELVD L VLI NPEATLQELLE MPGPDFPTGGLIMGNIGILEAY
Sbjct: 247  IAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYMPGPDFPTGGLIMGNIGILEAY 306

Query: 2175 RTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDI 1996
            RTG+GRI+VRGKT+VELLDSKTK TAVIIKE+PYQTNKS+LVEKIAELVENKS++GISDI
Sbjct: 307  RTGRGRIIVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSSLVEKIAELVENKSLDGISDI 366

Query: 1995 RDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQ 1816
            RDESDR+GMRIVIELKRGSD SIVLN LYRLTALQSSFSCNM+GILDGQPKLMGLKELLQ
Sbjct: 367  RDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQSSFSCNMIGILDGQPKLMGLKELLQ 426

Query: 1815 AFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRK 1636
            AFLDFRCSV+ERRARFKLS AQER+HIVEGI+VGL N+D VIR+I+E+P+N MAS  LR 
Sbjct: 427  AFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLDNLDAVIRVIKEAPSNAMASTGLRN 486

Query: 1635 EYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEA 1456
            E+GLSE+QAEA+LDI+LR++T LE +KFV E K L EQISKL ELLSS+KQILQ+IEQEA
Sbjct: 487  EFGLSERQAEAILDISLRRITRLEREKFVTESKSLMEQISKLQELLSSRKQILQLIEQEA 546

Query: 1455 IEVKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTI 1276
            IE+KN+F+                ++DVIPNEEMLLA+SEKGY+KRMKP+TFNLQNRGTI
Sbjct: 547  IELKNRFSTPRRSMLEDTDSGQLEDVDVIPNEEMLLAVSEKGYVKRMKPNTFNLQNRGTI 606

Query: 1275 GKSVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSL 1096
            GKSVG +RVND MS+F+VC +HD+VLYFSDRG+V+SARAYKIPEC+RTAAGTPLV+IL L
Sbjct: 607  GKSVGKLRVNDAMSDFIVCHAHDYVLYFSDRGIVHSARAYKIPECTRTAAGTPLVQILCL 666

Query: 1095 ADGERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWV 916
            +DGERITSIIPVSEF  DQ+L+MLTMNGYIKKVSLN+FS+IR+TGIIAIQLVPGDELKWV
Sbjct: 667  SDGERITSIIPVSEFAEDQFLLMLTMNGYIKKVSLNFFSSIRSTGIIAIQLVPGDELKWV 726

Query: 915  RCCTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKN 736
            RCCTN+DL+ MASQNGMVILSSCE +RALGRNTRGS+AMRLK GDKMA MDIIPAA+ K+
Sbjct: 727  RCCTNDDLVAMASQNGMVILSSCEIIRALGRNTRGSIAMRLKQGDKMASMDIIPAAIRKD 786

Query: 735  LQRSSVNRRI---DLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVA 565
            L+++  +R+    +L+ PWLLFVSESG+GKRVPLS FRLS LN+VGLIGYK ++ED L A
Sbjct: 787  LEKALEDRQSRARNLNGPWLLFVSESGLGKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAA 846

Query: 564  VYVVGYSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSAS 385
            V+VVG+SL EDGESDEQ+VLVSQSGT+NRIKV D+SIQSRFARGVILMRL++ GKIQSAS
Sbjct: 847  VFVVGFSLTEDGESDEQVVLVSQSGTINRIKVWDISIQSRFARGVILMRLEYAGKIQSAS 906

Query: 384  LIS 376
            L+S
Sbjct: 907  LMS 909


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score = 1332 bits (3446), Expect = 0.0
 Identities = 678/838 (80%), Positives = 755/838 (90%)
 Frame = -3

Query: 2889 VLKERNGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELG 2710
            V K+  G DG+IV   LHKEAT+AYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELG
Sbjct: 78   VKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELG 137

Query: 2709 LSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADP 2530
            LSSRKPFKKCARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+R PLIQGHGNFGSIDADP
Sbjct: 138  LSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIQGHGNFGSIDADP 197

Query: 2529 PAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIA 2350
            PAAMRYTECRL AL+EA+LL DL  +TVDFVPNFDNSQKEPSLLPAR+PTLLLNGSSGIA
Sbjct: 198  PAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIA 257

Query: 2349 VGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRT 2170
            VGMATNIPPHNLGE+VDAL VLIHNPEATLQELLE MPGPDFPTGGLIMGN GILEAYRT
Sbjct: 258  VGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNNGILEAYRT 317

Query: 2169 GKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRD 1990
            G+GRI VRGKT+VELLDSKTK TAVIIKE+PYQTNKSALVE+IAELVENK+++GISDIRD
Sbjct: 318  GRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVERIAELVENKTLDGISDIRD 377

Query: 1989 ESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAF 1810
            ESDRTGMRIVIELKRG+D SIV NNLYRLT+LQSSFSCNMVGI++GQPKLMGLKELLQAF
Sbjct: 378  ESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMVGIINGQPKLMGLKELLQAF 437

Query: 1809 LDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEY 1630
            LDFRCSV+ERRARFKL HAQER+HIVEGI++GL N+DGVIR+IRE+ ++++ASA LR ++
Sbjct: 438  LDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIRLIREASSHSIASASLRTQF 497

Query: 1629 GLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIE 1450
             LSEKQAEA+LDI LR+LT LE KKF+DE K L E ISKL ELLSS+  ILQ+IEQEA E
Sbjct: 498  NLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISKLEELLSSRNNILQLIEQEATE 557

Query: 1449 VKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGK 1270
            +K+KF                 +IDVIPNEEMLLA SEKGY+KRMKP+TFNLQ+RGTIGK
Sbjct: 558  LKDKFPNPRRSVLEDTDSGQVEDIDVIPNEEMLLAFSEKGYVKRMKPNTFNLQHRGTIGK 617

Query: 1269 SVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLAD 1090
            SVG +RVND MS+F+VCR+HDHVLYFSD+G+VYSARAYKIPEC RTAAGTPLV++LSL+D
Sbjct: 618  SVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVYSARAYKIPECGRTAAGTPLVQVLSLSD 677

Query: 1089 GERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRC 910
            GERITSIIPVSEF GDQ+L+MLT  GYIKKVSLN+FS+IR+TGIIAIQLV GDELKWVR 
Sbjct: 678  GERITSIIPVSEFEGDQFLLMLTAYGYIKKVSLNFFSSIRSTGIIAIQLVSGDELKWVRR 737

Query: 909  CTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQ 730
            CTN++L+ MASQNGMVILSSC+T+RALGRNTRGSVAM+LK GDKMA MDIIPAA+  +L+
Sbjct: 738  CTNDNLVAMASQNGMVILSSCDTIRALGRNTRGSVAMKLKTGDKMASMDIIPAAVWNDLE 797

Query: 729  RSSVNRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVG 550
            R+S       + PWLLFVSESG+GKRVPL SFRLS L +VGLIG K +S+DRL AV+VVG
Sbjct: 798  RNSSK---SSNGPWLLFVSESGVGKRVPLKSFRLSPLRRVGLIGCKFSSQDRLAAVFVVG 854

Query: 549  YSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            +SLAEDGESDEQ+VLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDH GKIQSASLIS
Sbjct: 855  FSLAEDGESDEQVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHAGKIQSASLIS 912


>ref|XP_007010651.1| DNA gyrase subunit A [Theobroma cacao] gi|508727564|gb|EOY19461.1|
            DNA gyrase subunit A [Theobroma cacao]
          Length = 1368

 Score = 1324 bits (3426), Expect = 0.0
 Identities = 673/835 (80%), Positives = 748/835 (89%), Gaps = 3/835 (0%)
 Frame = -3

Query: 2871 GRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKP 2692
            G DG++VP ELHKEATE+YMAYA+SVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKP
Sbjct: 78   GGDGRVVPTELHKEATESYMAYALSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKP 137

Query: 2691 FKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMRY 2512
            FKKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLIQGHGNFGSIDADPPAAMRY
Sbjct: 138  FKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRFPLIQGHGNFGSIDADPPAAMRY 197

Query: 2511 TECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMATN 2332
            TECRL ALTEA+LL DL QDTVDFVPNFDNS KEPSLLPAR+PTLLLNG+SGIAVGMATN
Sbjct: 198  TECRLEALTEAILLADLEQDTVDFVPNFDNSHKEPSLLPARLPTLLLNGTSGIAVGMATN 257

Query: 2331 IPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGKGRIV 2152
            IPPHNLGELVD L  LI NPEA+LQELLE MPGPDFPTGGLIMGN+GILEAYRTG+GRIV
Sbjct: 258  IPPHNLGELVDVLCALIQNPEASLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRIV 317

Query: 2151 VRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRTG 1972
            VRGK D+ELLDSKTK +AVIIKE+PYQTNKS+LVEKIAELVENKS+EGISDIRDESDR+G
Sbjct: 318  VRGKADIELLDSKTKRSAVIIKEIPYQTNKSSLVEKIAELVENKSLEGISDIRDESDRSG 377

Query: 1971 MRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRCS 1792
            MR+VIELKRGSD SIVLNNLYRLTALQSSFSCNMVGILDGQPK MGLKELLQ+FLDFRCS
Sbjct: 378  MRVVIELKRGSDPSIVLNNLYRLTALQSSFSCNMVGILDGQPKQMGLKELLQSFLDFRCS 437

Query: 1791 VIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEKQ 1612
            V+ERRAR+KLS AQ+R+HIVEGI+VGL N+D VI IIRE+ +N  ASA LR E+ LS+KQ
Sbjct: 438  VVERRARYKLSQAQDRRHIVEGIVVGLDNLDSVIDIIREASSNAAASAGLRNEFNLSDKQ 497

Query: 1611 AEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKFA 1432
            AEA+LDI LR+L  LE KKFV E + L EQISKL ELLSS+K ILQ+IEQEAIE+K+KF+
Sbjct: 498  AEAILDINLRRLNLLERKKFVGESRSLMEQISKLTELLSSRKNILQLIEQEAIELKSKFS 557

Query: 1431 XXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTMR 1252
                            +IDVIPNEEMLLA SEKGY+KRMKP+TFNLQNRGTIGKSVG +R
Sbjct: 558  SPRRSILEDSDGGQLEDIDVIPNEEMLLAFSEKGYVKRMKPNTFNLQNRGTIGKSVGKLR 617

Query: 1251 VNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERITS 1072
             ND MS+F+VCR+HDHVLYFSD+G+VY+ARAYKIPE SRTAAGTPLV+I+SL++GERITS
Sbjct: 618  FNDAMSDFIVCRAHDHVLYFSDKGIVYTARAYKIPESSRTAAGTPLVQIISLSEGERITS 677

Query: 1071 IIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNEDL 892
            II VSEF  DQ+L MLT+NGYIKKVSLNYFSAIR+TGIIAIQLVPGDELKWVRCC N+DL
Sbjct: 678  IISVSEFAEDQFLAMLTVNGYIKKVSLNYFSAIRSTGIIAIQLVPGDELKWVRCCINDDL 737

Query: 891  IGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRS---S 721
            + MASQNGMVILSSC  +RAL RNTRG++AMRLK GDKMA MDIIPA   K+L ++   S
Sbjct: 738  VAMASQNGMVILSSCGIIRALSRNTRGAIAMRLKEGDKMASMDIIPAPRHKDLDKAEEDS 797

Query: 720  VNRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSL 541
            +N     S PWLLFVSE+G GKRVPLSSF+ S LN+VGLIGYK +SEDRL AV+VVG+SL
Sbjct: 798  MNNNKGGSGPWLLFVSENGYGKRVPLSSFKRSPLNRVGLIGYKFSSEDRLAAVFVVGFSL 857

Query: 540  AEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            AEDGESDEQ+VLVSQSGTVNRIKVRD+SIQSR+ARGVILMRL++ GKIQSASLIS
Sbjct: 858  AEDGESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEYAGKIQSASLIS 912


>ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 935

 Score = 1319 bits (3413), Expect = 0.0
 Identities = 668/834 (80%), Positives = 749/834 (89%), Gaps = 4/834 (0%)
 Frame = -3

Query: 2865 DGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFK 2686
            +G++VP ELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSS+KPFK
Sbjct: 88   EGRVVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFK 147

Query: 2685 KCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMRYTE 2506
            KCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLIQGHGNFGSIDADPPAAMRYTE
Sbjct: 148  KCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIQGHGNFGSIDADPPAAMRYTE 207

Query: 2505 CRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMATNIP 2326
            CRL  LTEA+LL DL QDTVDFVPNFDNSQKEPSLLPAR+PTLLLNGSSGIAVGMATNIP
Sbjct: 208  CRLDDLTEAMLLTDLEQDTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIP 267

Query: 2325 PHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGKGRIVVR 2146
            PHNLGE+VD L VLIHNPEATLQELLE MPGPDFPTGGLIMGN+GILEAYRTG+GR+++R
Sbjct: 268  PHNLGEVVDVLCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIIR 327

Query: 2145 GKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRTGMR 1966
            GKTD+ELLDSKTK TA+IIKE+PYQTNK+ LVEKIAELVENKS++GISDIRDESDR+GMR
Sbjct: 328  GKTDIELLDSKTKRTAIIIKEIPYQTNKATLVEKIAELVENKSLDGISDIRDESDRSGMR 387

Query: 1965 IVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRCSVI 1786
            IVIELKRGSD  IVLNNLYRLT+LQS+FSCNMVGIL+GQPK MGLKELLQAFLDFRCSV+
Sbjct: 388  IVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVV 447

Query: 1785 ERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEKQAE 1606
            ERRARFKLS AQER+HIVEGI++G  N+DGVIRIIRE+ +N+ A+A LR  + LSEKQAE
Sbjct: 448  ERRARFKLSQAQERRHIVEGILIGFDNLDGVIRIIREASSNSAAAAGLRNAFSLSEKQAE 507

Query: 1605 ALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKFAXX 1426
            ALLDI+LR+L+  ES  FV E K L EQISKL ELLSS+K IL++IEQEAIE+K+KF+  
Sbjct: 508  ALLDISLRRLSLRESGNFVAESKSLMEQISKLEELLSSRKNILELIEQEAIELKSKFSNP 567

Query: 1425 XXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTMRVN 1246
                          +IDVIPNEEM+LALSEKGY+KRMKPSTFNLQNRGTIGKSVG ++VN
Sbjct: 568  RRSMLEDTDNGQLEDIDVIPNEEMILALSEKGYMKRMKPSTFNLQNRGTIGKSVGKLKVN 627

Query: 1245 DTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERITSII 1066
            D+MS+FLVC +HDHVLYFSD+G VYSARAYKIPECSRTAAGTPLV+ILSL+DGERITSII
Sbjct: 628  DSMSDFLVCHAHDHVLYFSDKGTVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSII 687

Query: 1065 PVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNEDLIG 886
            PVSEF  DQ+L+MLTM GYIK+VSLN FS+IR+ GIIAIQLVPGDELKWVR C+N+D + 
Sbjct: 688  PVSEFAEDQFLLMLTMQGYIKRVSLNLFSSIRSIGIIAIQLVPGDELKWVRLCSNDDFVA 747

Query: 885  MASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSS----V 718
            MAS NGMV+LS C  +R L RNTRG+ AMRLK GDKMA +DIIPAAM  NL+ +S    +
Sbjct: 748  MASHNGMVMLSQCSKIRTLSRNTRGAPAMRLKKGDKMASVDIIPAAMWNNLETTSKFPGI 807

Query: 717  NRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSLA 538
            N +   + PWLLFVSE+G GKRVPLSSFR+SSLN+VGLIGYK ++EDRL AV+VVG+S A
Sbjct: 808  NAK-SQNGPWLLFVSENGYGKRVPLSSFRISSLNRVGLIGYKFSAEDRLAAVFVVGFSSA 866

Query: 537  EDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            EDGESDEQ+VLVSQSGTVNRIKVRD+SIQSRFARGVILMRLDH+GKIQSASLIS
Sbjct: 867  EDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRLDHSGKIQSASLIS 920


>ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X3 [Solanum tuberosum]
          Length = 957

 Score = 1316 bits (3406), Expect = 0.0
 Identities = 665/852 (78%), Positives = 759/852 (89%), Gaps = 12/852 (1%)
 Frame = -3

Query: 2895 SLVLKERNGRDG--------KIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHR 2740
            S++L++R+G +G        +IV  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHR
Sbjct: 87   SVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHR 146

Query: 2739 RILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGH 2560
            RIL+AMHELGLSS+KP+KKCARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+R PLI+GH
Sbjct: 147  RILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIRGH 206

Query: 2559 GNFGSIDADPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPT 2380
            GNFGSIDADPPAAMRYTECRL ALTEA+LL DL Q+TVDFVPNFDNSQKEPSLLPARIP 
Sbjct: 207  GNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQKEPSLLPARIPN 266

Query: 2379 LLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMG 2200
            LLLNG+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLE MPGPDFPTGG+IMG
Sbjct: 267  LLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMG 326

Query: 2199 NIGILEAYRTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENK 2020
            NIGILEAYRTG+GR+V+RGKTD+ELLD+KTK  A+II+E+PYQTNK++LVEKIA+LVENK
Sbjct: 327  NIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKASLVEKIADLVENK 386

Query: 2019 SIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKL 1840
            ++EG+SDIRDESDR+GMR+VIELKRGSD +IVLNNLYRLTALQSSFSCNMVGIL+GQPKL
Sbjct: 387  TLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILNGQPKL 446

Query: 1839 MGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNT 1660
            MGLKELLQAFLDFRCSV+ERRA++KLS AQER HIVEGII+GL N+D VI+ IR++ ++ 
Sbjct: 447  MGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVEGIIIGLDNLDEVIKTIRKASSHA 506

Query: 1659 MASALLRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQI 1480
            +A+A LRKE+ L+EKQAEA+LDI+LR+LT+LE  KFVDEGK L  QISKL ELLSSKKQI
Sbjct: 507  LATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRAQISKLEELLSSKKQI 566

Query: 1479 LQMIEQEAIEVKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTF 1300
            LQ+IE+EA+E+K+K+                 +IDVIPNEEMLLA+SEKGY+KRMKP TF
Sbjct: 567  LQLIEEEALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLLAISEKGYVKRMKPDTF 626

Query: 1299 NLQNRGTIGKSVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGT 1120
            NLQNRGTIGKSVG +RVND MS+FLVCR+HD VLYFSD+G VYS  AYKIPECSRTAAGT
Sbjct: 627  NLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSYPAYKIPECSRTAAGT 686

Query: 1119 PLVRILSLADGERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLV 940
            PL++ILSL+DGERITSIIPVSEFVGDQYLVMLT+NGYIKKVSLNYF++IR+TGIIAIQLV
Sbjct: 687  PLIQILSLSDGERITSIIPVSEFVGDQYLVMLTVNGYIKKVSLNYFASIRSTGIIAIQLV 746

Query: 939  PGDELKWVRCCTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDI 760
            PGDELKWV+CC+N D + MAS NGMVIL+ C  +RALGRNTRGSVAMRLK GDK+A MDI
Sbjct: 747  PGDELKWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGSVAMRLKDGDKVASMDI 806

Query: 759  IPAAMGKNLQRSSV----NRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYK 592
            IP A+ K L  +      NRR  ++ PWLLFVSESG GKRVP+S FR S LN+VGLIGYK
Sbjct: 807  IPDALQKELDMTLAVHQRNRR-SMNGPWLLFVSESGYGKRVPVSRFRTSPLNRVGLIGYK 865

Query: 591  LASEDRLVAVYVVGYSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLD 412
             +SEDRL AV+VVG+S  EDGESDEQ+VLVSQSGTVNRIKV+D+SIQSR+ARGVILMRL+
Sbjct: 866  FSSEDRLAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVQDISIQSRYARGVILMRLE 925

Query: 411  HTGKIQSASLIS 376
            H GKIQSASLIS
Sbjct: 926  HAGKIQSASLIS 937


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score = 1313 bits (3399), Expect = 0.0
 Identities = 667/839 (79%), Positives = 750/839 (89%), Gaps = 3/839 (0%)
 Frame = -3

Query: 2883 KERNGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLS 2704
            ++RNG + ++V  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRIL+AMHELGLS
Sbjct: 82   EDRNGGE-RVVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLS 140

Query: 2703 SRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPA 2524
            S+KP+KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLI+GHGNFGSIDADPPA
Sbjct: 141  SKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPA 200

Query: 2523 AMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVG 2344
            AMRYTECRL ALTE++LL DL Q+TVDFVPNFDNSQKEPSLLPAR+P LLLNG+SGIAVG
Sbjct: 201  AMRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKEPSLLPARVPNLLLNGASGIAVG 260

Query: 2343 MATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGK 2164
            MATNIPPHNLGELVDALS LIHNPEATLQELLE MPGPDFPTGG+IMGNIGILEA+RTG+
Sbjct: 261  MATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMGNIGILEAFRTGR 320

Query: 2163 GRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDES 1984
            GR+V+RGKTD+ELLDSKTK  A+II+E+PYQTNK++LVEKIA+LVENK +EG+SDIRDES
Sbjct: 321  GRVVIRGKTDIELLDSKTKRAAIIIQEIPYQTNKASLVEKIADLVENKILEGVSDIRDES 380

Query: 1983 DRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLD 1804
            DR+GMRIVIELKRGSD +IVLNNLYRLTALQSSFSCNMVGIL+GQPKLMGLKELLQAFLD
Sbjct: 381  DRSGMRIVIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILNGQPKLMGLKELLQAFLD 440

Query: 1803 FRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGL 1624
            FRCSV+ERRARFKLS AQER HIVEGIIVGL N+D VI  IR++ +N +A+A LRKE+ L
Sbjct: 441  FRCSVVERRARFKLSQAQERNHIVEGIIVGLDNLDEVINTIRKASSNALAAASLRKEFEL 500

Query: 1623 SEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVK 1444
            SEKQAEA+LDI+LR+LT+LE  KFV+EGK L  QISKL ELLSSKKQILQ+IE+EAIE+K
Sbjct: 501  SEKQAEAILDISLRRLTALERNKFVEEGKSLRTQISKLEELLSSKKQILQLIEEEAIEIK 560

Query: 1443 NKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSV 1264
            NKF                 +IDVIPNEEMLLA+SEKGY+KRMKP TFNLQNRGTIGKSV
Sbjct: 561  NKFFNPRRSMLEDTDSGDLEDIDVIPNEEMLLAISEKGYVKRMKPDTFNLQNRGTIGKSV 620

Query: 1263 GTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGE 1084
            G +RVND MS+FLVCR+HD VLYFSD+G VYS+ AYKIPECSRTAAGTPLV+ILSL+DGE
Sbjct: 621  GKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSSPAYKIPECSRTAAGTPLVQILSLSDGE 680

Query: 1083 RITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCT 904
            RITSIIPVSEF  DQYLVMLT+NGYIKKVSLNYF++IR TGIIAIQLVP DELKWV+CC+
Sbjct: 681  RITSIIPVSEFAADQYLVMLTVNGYIKKVSLNYFASIRCTGIIAIQLVPDDELKWVKCCS 740

Query: 903  NEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRS 724
            N D + MASQNGMVIL+ C  +RALGRNTRGSVAMRLK GDK+A MDIIP A+ K L ++
Sbjct: 741  NNDFVAMASQNGMVILTPCANIRALGRNTRGSVAMRLKEGDKVASMDIIPDALQKELDKT 800

Query: 723  -SVNRR--IDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVV 553
              V +R    +  PWLLFVSESG GKRVP+S FR S LN+VGL GYK +SED L AV+VV
Sbjct: 801  LEVQQRQYRSMKGPWLLFVSESGYGKRVPVSRFRTSPLNRVGLFGYKFSSEDCLAAVFVV 860

Query: 552  GYSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            G+SL EDGESDEQ+VLVSQSGTVNRIKVRD+SIQSR+ARGVILMRL+H GKIQSASLIS
Sbjct: 861  GFSLGEDGESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIQSASLIS 919


>ref|XP_007153283.1| hypothetical protein PHAVU_003G022300g [Phaseolus vulgaris]
            gi|561026637|gb|ESW25277.1| hypothetical protein
            PHAVU_003G022300g [Phaseolus vulgaris]
          Length = 942

 Score = 1313 bits (3397), Expect = 0.0
 Identities = 665/836 (79%), Positives = 744/836 (88%), Gaps = 3/836 (0%)
 Frame = -3

Query: 2874 NGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRK 2695
            NG +G++VP ELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSS+K
Sbjct: 92   NGSEGRVVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKK 151

Query: 2694 PFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMR 2515
            PFKKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLIQGHGNFGSIDADPPAAMR
Sbjct: 152  PFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIQGHGNFGSIDADPPAAMR 211

Query: 2514 YTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMAT 2335
            YTECRL  LTEA+LL DL QDTVDFVPNFDNSQKEPSLLPAR+PTLLLNGSSGIAVGMAT
Sbjct: 212  YTECRLDDLTEAMLLADLEQDTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMAT 271

Query: 2334 NIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGKGRI 2155
            NIPPHNLGE+VD L VLIHNPEATLQELLE MPGPDFPTGGLIMGN+GIL+AYRTG+GR+
Sbjct: 272  NIPPHNLGEVVDVLCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNLGILDAYRTGRGRV 331

Query: 2154 VVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRT 1975
            ++RGKTD+ELLDSKTK TA+IIKE+PYQTNK++LVEKIAE+VENKS++GISDIRDESDR+
Sbjct: 332  IIRGKTDIELLDSKTKRTAIIIKEIPYQTNKASLVEKIAEVVENKSLDGISDIRDESDRS 391

Query: 1974 GMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRC 1795
            GMRIVIELKRGSD  IVLNNLYRLT+LQS+FSCNMVGIL+GQPK MGLKELLQAFLDFRC
Sbjct: 392  GMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRC 451

Query: 1794 SVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEK 1615
            SV+ERRA FKLS A+ RKHIVEGI++G  N+D VIRIIRE+ +N+ A+  LR  + LSEK
Sbjct: 452  SVVERRAMFKLSQARGRKHIVEGILIGFDNLDEVIRIIREASSNSAAAVGLRNAFSLSEK 511

Query: 1614 QAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKF 1435
            QAEALLD++LR+LT  ES  FV E K L EQISKL ELLSS+K IL++IEQEAIE+KNKF
Sbjct: 512  QAEALLDMSLRRLTLRESGNFVAESKSLMEQISKLEELLSSRKNILELIEQEAIELKNKF 571

Query: 1434 AXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTM 1255
            A                +IDVIPNE+MLLA+SEKGYLKRMKPSTFNLQNRGTIGKSVG +
Sbjct: 572  ANPRRSMLEDTDNGQLEDIDVIPNEDMLLAVSEKGYLKRMKPSTFNLQNRGTIGKSVGKL 631

Query: 1254 RVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERIT 1075
            RVND+MS+FLVCR+HDHVLYFSD+G VYSARAYK+PECSRTAAGTPLV ILSL+DGERIT
Sbjct: 632  RVNDSMSDFLVCRAHDHVLYFSDKGTVYSARAYKVPECSRTAAGTPLVHILSLSDGERIT 691

Query: 1074 SIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNED 895
            SIIPVSEFV DQ+L+MLTM GYIK+VSLN FS+IR+TGIIAIQLVPGDELKWVR C+N+D
Sbjct: 692  SIIPVSEFVEDQFLLMLTMQGYIKRVSLNLFSSIRSTGIIAIQLVPGDELKWVRLCSNDD 751

Query: 894  LIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSSV- 718
             + MAS NGMV+L  C  +R L RNTRGS+AMRLK GD MA +DIIPAAM  NL+  S  
Sbjct: 752  FVAMASHNGMVMLCQCSKIRTLSRNTRGSLAMRLKNGDSMASVDIIPAAMWNNLETLSKY 811

Query: 717  --NRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYS 544
              N       PWLLFVSE+G GKRVPLSSFR+SSLN+VGL+GYK ++EDRL AV+VVG+S
Sbjct: 812  PDNSGKGQKGPWLLFVSENGHGKRVPLSSFRVSSLNRVGLVGYKFSAEDRLAAVFVVGFS 871

Query: 543  LAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
             AEDGESDEQ+VLVSQ+GTVNRIKVRD+SIQSRFARGVILMRLD+ GKIQSASLIS
Sbjct: 872  SAEDGESDEQVVLVSQTGTVNRIKVRDISIQSRFARGVILMRLDYAGKIQSASLIS 927


>ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Citrus sinensis]
          Length = 942

 Score = 1311 bits (3393), Expect = 0.0
 Identities = 665/849 (78%), Positives = 754/849 (88%), Gaps = 13/849 (1%)
 Frame = -3

Query: 2883 KERNGRDG----------KIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRI 2734
            +ERNG             +IVP+ELH+E T +Y+ Y+MSVLLGRALPDVRDGLKPVHRRI
Sbjct: 65   EERNGNGSVATVGPNVSPRIVPVELHEEMTGSYITYSMSVLLGRALPDVRDGLKPVHRRI 124

Query: 2733 LFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGN 2554
            LFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+R PLI+GHGN
Sbjct: 125  LFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRYPLIRGHGN 184

Query: 2553 FGSIDADPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLL 2374
            FGSIDADP AAMRYTECRL AL+EA+LL D+ QDTV+FVPNFD SQKEPSLLPAR+PTLL
Sbjct: 185  FGSIDADPAAAMRYTECRLEALSEAMLLADIDQDTVNFVPNFDESQKEPSLLPARLPTLL 244

Query: 2373 LNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNI 2194
            LNG+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLE MPGPDFPTGGLIMGN+
Sbjct: 245  LNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPGPDFPTGGLIMGNL 304

Query: 2193 GILEAYRTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSI 2014
            GIL+AYRTG+GRI VRGKT+VELLDSK+K   VIIKE+PYQTNKS LVEKIAELVENK++
Sbjct: 305  GILDAYRTGRGRITVRGKTEVELLDSKSKRMGVIIKEIPYQTNKSMLVEKIAELVENKTL 364

Query: 2013 EGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMG 1834
            +GISDIRDESDR+GMRIVIELKRG+D SIV+N+LYRLTALQSSFSCNMVGILDGQPK MG
Sbjct: 365  DGISDIRDESDRSGMRIVIELKRGADPSIVVNSLYRLTALQSSFSCNMVGILDGQPKQMG 424

Query: 1833 LKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMA 1654
            LKE+LQAFLDFRCSV+ERRARFKLS  +ER+HIVEGI+VGL N+D VIRI+RE+P+N+ A
Sbjct: 425  LKEVLQAFLDFRCSVVERRARFKLSQVKERRHIVEGIMVGLDNLDRVIRIVREAPSNSTA 484

Query: 1653 SALLRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQ 1474
            SA L+ E+ LSEKQA+A+LD+ LR+LT LE KKFVDE K L EQI KL ELLSS+K ILQ
Sbjct: 485  SAALKDEFKLSEKQADAILDMNLRRLTMLERKKFVDESKTLMEQILKLEELLSSRKNILQ 544

Query: 1473 MIEQEAIEVKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNL 1294
            +IEQEAIE+KN+F+                +ID+IPN+EMLLA+SEKGY+KRMKP+TFNL
Sbjct: 545  LIEQEAIELKNRFSTPRLSMLEDADSGQLDDIDIIPNDEMLLAISEKGYVKRMKPNTFNL 604

Query: 1293 QNRGTIGKSVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPL 1114
            QNRGTIGKSVG +RVND MS+F+VCR+HDHVLYFSDRG+VYSARAYKIPEC+R AAGTPL
Sbjct: 605  QNRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDRGIVYSARAYKIPECTRNAAGTPL 664

Query: 1113 VRILSLADGERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPG 934
            V+ILSL+DGERITSIIPVSEF GDQ+LVMLTMNGYIKKVSLN FS+IR TGIIAIQLVPG
Sbjct: 665  VQILSLSDGERITSIIPVSEFAGDQFLVMLTMNGYIKKVSLNLFSSIRTTGIIAIQLVPG 724

Query: 933  DELKWVRCCTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIP 754
            DELKWVRCCTN+DL+ MASQNGMVILSSC+ +R+L RNTRGSVAMRLK GDKMA MDIIP
Sbjct: 725  DELKWVRCCTNDDLVAMASQNGMVILSSCDIIRSLSRNTRGSVAMRLKDGDKMASMDIIP 784

Query: 753  AAMGKNLQRSSVNRRIDL---SAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLAS 583
            AA+ K+L+R+  +   ++   S PWLLFVSESG GKRVPLSSFR   LN+VGLIGYK ++
Sbjct: 785  AALHKDLERTPEDSHSNVKGSSGPWLLFVSESGHGKRVPLSSFRKLPLNRVGLIGYKFSA 844

Query: 582  EDRLVAVYVVGYSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTG 403
            EDRL AV+VVG+SLAEDGESDEQ+VLVSQSGTVNRIKVRD+SIQ+R+ARGVILMRL+ +G
Sbjct: 845  EDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQARYARGVILMRLELSG 904

Query: 402  KIQSASLIS 376
            KIQSASLIS
Sbjct: 905  KIQSASLIS 913


>ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X1 [Cicer arietinum]
          Length = 942

 Score = 1308 bits (3386), Expect = 0.0
 Identities = 665/849 (78%), Positives = 752/849 (88%), Gaps = 9/849 (1%)
 Frame = -3

Query: 2895 SLVLKERNG------RDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRI 2734
            SL + + NG       +G+IV  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRI
Sbjct: 79   SLAVIDGNGGGGDKRNEGRIVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRI 138

Query: 2733 LFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGN 2554
            LFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGD+AVYD++VRMAQDFS+R PL+ GHGN
Sbjct: 139  LFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSMVRMAQDFSLRSPLVNGHGN 198

Query: 2553 FGSIDADPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLL 2374
            FGSIDADPPAAMRYTECRL  L EA+LL DL QDTVDF PNFDNSQKEPS+LPAR+PTLL
Sbjct: 199  FGSIDADPPAAMRYTECRLEELAEAMLLADLDQDTVDFAPNFDNSQKEPSVLPARLPTLL 258

Query: 2373 LNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNI 2194
            LNGSSGIAVGMATNIPPHNLGE+VD L V+IHNPEATLQELLE MPGPDFPTGGLIMGN+
Sbjct: 259  LNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPEATLQELLEYMPGPDFPTGGLIMGNL 318

Query: 2193 GILEAYRTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSI 2014
            GILEAYRTG+GR++VRGKTD+ELLDSKTK TA+IIKE+PYQTNK+ALVEKIAELVENKS+
Sbjct: 319  GILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIIIKEIPYQTNKAALVEKIAELVENKSL 378

Query: 2013 EGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMG 1834
            EGISDIRDESDR+GMRIVIELKRGSD  IVLNNLYRLT+LQS+FSCNMVGIL+GQPK MG
Sbjct: 379  EGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQMG 438

Query: 1833 LKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMA 1654
            LKELLQAFLDFRCSV+ERRARF+LS AQ+R+H+VEGI+VG  N+D VIRIIRE+ +NT+A
Sbjct: 439  LKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVEGILVGFNNLDRVIRIIREASSNTIA 498

Query: 1653 SALLRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQ 1474
            +A LR E+ LSEKQAEALLD++LR+LT  ES  FV E K L EQISKL ELLSS+K IL+
Sbjct: 499  AAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFVAENKSLVEQISKLEELLSSRKNILE 558

Query: 1473 MIEQEAIEVKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNL 1294
            +IEQEAI++KNKFA                +IDVIPNEEMLLALSEKGYLKRMKPSTFNL
Sbjct: 559  LIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVIPNEEMLLALSEKGYLKRMKPSTFNL 618

Query: 1293 QNRGTIGKSVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPL 1114
            QNRGTIGKSVG +++ND+MS+F+VCR+HD+VLYFSD+G VYSARAYKIPECSRTAAGTPL
Sbjct: 619  QNRGTIGKSVGKLKMNDSMSDFIVCRAHDYVLYFSDKGTVYSARAYKIPECSRTAAGTPL 678

Query: 1113 VRILSLADGERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPG 934
            V+ILSL+DGERITSIIPVSEF  DQ+L+MLTM GYIK+V LN FS+IR+TGIIAIQLVPG
Sbjct: 679  VQILSLSDGERITSIIPVSEFTEDQFLLMLTMQGYIKRVPLNSFSSIRSTGIIAIQLVPG 738

Query: 933  DELKWVRCCTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIP 754
            D+LKWVRCCTN+D + MAS NGMVILS C  +R LGRNTRG +AMRL+ GD+MA +DIIP
Sbjct: 739  DKLKWVRCCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRGGLAMRLREGDRMASVDIIP 798

Query: 753  AAMGKNLQRSSV---NRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLAS 583
            A+M  +L+  S    N     + PWLLFVSESG GKRVPLS FR+SSLN+VGLIGYK ++
Sbjct: 799  ASMWNDLETISKLPGNNVKSHNGPWLLFVSESGYGKRVPLSFFRMSSLNRVGLIGYKFSA 858

Query: 582  EDRLVAVYVVGYSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTG 403
            EDRL +V+VVG+SLAEDGESDEQ+VLVSQSGTVNRIKVRD+SIQSRFARGVILMRLDH G
Sbjct: 859  EDRLASVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRLDHAG 918

Query: 402  KIQSASLIS 376
            KIQSASLIS
Sbjct: 919  KIQSASLIS 927


>ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 939

 Score = 1308 bits (3386), Expect = 0.0
 Identities = 668/833 (80%), Positives = 743/833 (89%), Gaps = 3/833 (0%)
 Frame = -3

Query: 2865 DGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFK 2686
            D +IV +ELHKEAT+AYMAYAMSVLLGRALPD+RDGLKPVHRRIL+AMHEL LSSRKPF 
Sbjct: 89   DERIVRVELHKEATDAYMAYAMSVLLGRALPDIRDGLKPVHRRILYAMHELRLSSRKPFV 148

Query: 2685 KCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMRYTE 2506
            KCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLI GHGNFGSIDADP AAMRYTE
Sbjct: 149  KCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLINGHGNFGSIDADPAAAMRYTE 208

Query: 2505 CRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMATNIP 2326
            CRL ALTEA+LL DL QDTVDFVPNFDNSQKEPSLLPAR+P LLLNGSSGIAVGMATNIP
Sbjct: 209  CRLEALTEAMLLSDLEQDTVDFVPNFDNSQKEPSLLPARVPNLLLNGSSGIAVGMATNIP 268

Query: 2325 PHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGKGRIVVR 2146
            PHNLGELVD LSVLIHNPEATLQELLE MPGPDFPTGGLIMGN+GILEAYRTG+GRIVVR
Sbjct: 269  PHNLGELVDVLSVLIHNPEATLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRIVVR 328

Query: 2145 GKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRTGMR 1966
            GKTD+E LDSK K +A+IIKE+PYQTNK+ALVEKIA+LVENK ++GISDIRDESDRTGMR
Sbjct: 329  GKTDIESLDSKGKRSAIIIKEIPYQTNKAALVEKIAQLVENKILDGISDIRDESDRTGMR 388

Query: 1965 IVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRCSVI 1786
            +VIELKRGSD SIVLNNLYRLT+LQSSFSCNMVGIL+GQPKLMGLKELLQAFLDFRCSVI
Sbjct: 389  VVIELKRGSDPSIVLNNLYRLTSLQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVI 448

Query: 1785 ERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEKQAE 1606
            ERRA+FKLS AQ+R+HIVEGI VGL N+  V+RI  E+ NNT+AS+LLR E+ LSEKQAE
Sbjct: 449  ERRAKFKLSQAQDRRHIVEGIAVGLDNLQRVMRISLEASNNTIASSLLRNEFNLSEKQAE 508

Query: 1605 ALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKFAXX 1426
            A+LD   R+L  LE KKF +E + L EQISKL ELLSSKK+ILQ++EQEAI++KNKFA  
Sbjct: 509  AILDFNFRRLNVLERKKFDNESESLKEQISKLEELLSSKKRILQVVEQEAIDIKNKFANP 568

Query: 1425 XXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTMRVN 1246
                          +IDVIPN+EMLLA SEKGY+KRMKP+TFNLQNRGTIGKSVG +RVN
Sbjct: 569  RRSMLEDSDGGQLDDIDVIPNDEMLLAFSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVN 628

Query: 1245 DTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERITSII 1066
            D MS+F+VC +HDHVL+FSD+G VYSARAYKIPECSRTAAGTPLV+ILSL+DGERITS+I
Sbjct: 629  DAMSDFIVCHAHDHVLFFSDKGTVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSVI 688

Query: 1065 PVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNEDLIG 886
            PVSEF GDQ+L+MLT+NGYIKKVSL+ FS+IR+TGIIAIQLVPGDELKWVRCCTN+DL+ 
Sbjct: 689  PVSEFAGDQFLLMLTVNGYIKKVSLSSFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVA 748

Query: 885  MASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSS---VN 715
            MAS NGMVIL S + +RALGRNTRGSVAMRLK GDKMA +DIIPAAM K+L+R S    +
Sbjct: 749  MASLNGMVILCSSDIIRALGRNTRGSVAMRLKEGDKMASVDIIPAAMWKDLKRVSEAPES 808

Query: 714  RRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSLAE 535
                L  PWLLFVSESG GKRVPLS F  S LN+VGLIGYK +SEDRL AV+VVG+SLAE
Sbjct: 809  TARSLDGPWLLFVSESGYGKRVPLSRFHSSRLNRVGLIGYKFSSEDRLAAVFVVGFSLAE 868

Query: 534  DGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            DGESDEQ+VLVSQSGTVNRIKVRD+SIQSR+ARGVILMRLD  GKIQSASL+S
Sbjct: 869  DGESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLDLAGKIQSASLMS 921


>ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Solanum lycopersicum]
          Length = 953

 Score = 1308 bits (3386), Expect = 0.0
 Identities = 661/847 (78%), Positives = 758/847 (89%), Gaps = 7/847 (0%)
 Frame = -3

Query: 2895 SLVLKERNGRDG----KIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILF 2728
            S+VL++R+G +G    +IV  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRIL+
Sbjct: 87   SVVLRDRDGNEGGGGERIVHTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILY 146

Query: 2727 AMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFG 2548
            AMHELGLSS+KP+KK ARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+R PLI+GHGNFG
Sbjct: 147  AMHELGLSSKKPYKKSARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIRGHGNFG 206

Query: 2547 SIDADPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLN 2368
            SIDADPPAAMRYTECRL ALTEA+LL DL Q+TVDFVPNFDNSQKEPSLLPARIP LLLN
Sbjct: 207  SIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQKEPSLLPARIPNLLLN 266

Query: 2367 GSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGI 2188
            G+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLE MPGPDFPTGG+IMGNIGI
Sbjct: 267  GASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMGNIGI 326

Query: 2187 LEAYRTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEG 2008
            LEAYRTG+GR+V+RGKTD+ELLD+KTK  A+II+E+PYQTNK++LVEKIA+LVENK++EG
Sbjct: 327  LEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKASLVEKIADLVENKTLEG 386

Query: 2007 ISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLK 1828
            +SDIRDESDR+GMR+VIELKRGSD +IVLNNLYRLT LQSSFSCNMVGIL+GQPKLMGLK
Sbjct: 387  VSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTPLQSSFSCNMVGILNGQPKLMGLK 446

Query: 1827 ELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASA 1648
            ELLQAFLDFRCSV+ERRA++KLS AQER HIVEGII+GL N+D VI  IR++ ++ +A+A
Sbjct: 447  ELLQAFLDFRCSVVERRAKYKLSQAQERNHIVEGIIIGLDNLDEVINTIRKASSHALATA 506

Query: 1647 LLRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMI 1468
             LRKE+ L+EKQAEA+LDI+LR+LT+LE  KFVDEGK L  QISKL ELLSS+KQILQ+I
Sbjct: 507  NLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRTQISKLEELLSSEKQILQLI 566

Query: 1467 EQEAIEVKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQN 1288
            E+EA+E+K+K+                 +IDVIPNEEMLLA+SEKGY+KRMKP TFNLQN
Sbjct: 567  EEEALEIKDKYFTPRRSQLEDTDSGDLEDIDVIPNEEMLLAISEKGYVKRMKPDTFNLQN 626

Query: 1287 RGTIGKSVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVR 1108
            RGTIGKSVG +RVND MS+FLVCR+HD VLYFSD+G VYS+ AYKIPECSRTAAGTPL++
Sbjct: 627  RGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSSPAYKIPECSRTAAGTPLIQ 686

Query: 1107 ILSLADGERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDE 928
            ILSL+DGERITSIIPVS+F GDQYLVMLT+NGYIKKVSLNYF++IR+TGIIAIQLVPGDE
Sbjct: 687  ILSLSDGERITSIIPVSDFAGDQYLVMLTVNGYIKKVSLNYFASIRSTGIIAIQLVPGDE 746

Query: 927  LKWVRCCTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAA 748
            LKWV+CC+N D + MAS NGMVIL+ C  +RALGRNTRGSVAMRLK GDK+A MDIIP A
Sbjct: 747  LKWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGSVAMRLKDGDKVASMDIIPDA 806

Query: 747  MGKNLQRS-SVNRR--IDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASED 577
            + K L  + +V++R    ++ PWLLFVSESG GKRVP+S FR S LN+VGLIGYK +SED
Sbjct: 807  LQKELDVTLAVHQRNKRSMNGPWLLFVSESGYGKRVPVSRFRTSPLNRVGLIGYKFSSED 866

Query: 576  RLVAVYVVGYSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKI 397
            RL AV+VVG+S  EDGESDEQ+VLVSQSGTVNRIKVRD+SIQSR+ARGVILMRL+H GKI
Sbjct: 867  RLAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKI 926

Query: 396  QSASLIS 376
            QSASLIS
Sbjct: 927  QSASLIS 933


>gb|EYU26907.1| hypothetical protein MIMGU_mgv1a000966mg [Mimulus guttatus]
          Length = 928

 Score = 1306 bits (3380), Expect = 0.0
 Identities = 660/835 (79%), Positives = 746/835 (89%), Gaps = 3/835 (0%)
 Frame = -3

Query: 2871 GRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKP 2692
            G +G++V  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRIL+AMHELGLSSRKP
Sbjct: 79   GGEGRVVVYELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSRKP 138

Query: 2691 FKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMRY 2512
             KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFS+R PLI+GHGNFGS+DADPPAAMRY
Sbjct: 139  HKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHGNFGSMDADPPAAMRY 198

Query: 2511 TECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMATN 2332
            TECRL AL EA+LL DL QDTVDFVPNFDNSQKEPSLLPARIP LLLNG+SGIAVGMATN
Sbjct: 199  TECRLEALAEAMLLSDLEQDTVDFVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATN 258

Query: 2331 IPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGKGRIV 2152
            IPPHNLGELVDALSVLIHNPEATLQELLE MPGPDFPTGG+IMGN GIL+AYRTG+GR+V
Sbjct: 259  IPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGIIMGNTGILDAYRTGRGRVV 318

Query: 2151 VRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRTG 1972
            +RGKTDVEL DSK+K +A+IIKE+PYQTNK++LVEKIAELVENK +EGISDIRDESDR+G
Sbjct: 319  IRGKTDVELFDSKSKRSAIIIKEIPYQTNKASLVEKIAELVENKILEGISDIRDESDRSG 378

Query: 1971 MRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRCS 1792
            MRIVIELKRGS+ SIVLNNLYRLTALQS+FSCNMVGIL+GQPKLMGLKELLQAFLDFRCS
Sbjct: 379  MRIVIELKRGSEPSIVLNNLYRLTALQSTFSCNMVGILNGQPKLMGLKELLQAFLDFRCS 438

Query: 1791 VIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEKQ 1612
            V+ERRA++KLS AQ+R HIVEGII GL+N+D VI +IR++ ++ +A+  LRKE+ LS+KQ
Sbjct: 439  VVERRAKYKLSQAQDRYHIVEGIITGLENLDRVIDLIRKASSHVLATTELRKEFDLSDKQ 498

Query: 1611 AEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKFA 1432
            AEA+LDI+LRKLTSLE  KFVDEGK L+ QISKL ELLSS+KQIL+MIE EA E+KNKF 
Sbjct: 499  AEAILDISLRKLTSLEKNKFVDEGKSLSLQISKLQELLSSRKQILEMIEDEANEIKNKFF 558

Query: 1431 XXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTMR 1252
                            +IDVIPNEE+LLALSEKGYLKRM+P TFNLQ RGTIGKSVG +R
Sbjct: 559  TPRRSMLEDTDSGQLEDIDVIPNEEILLALSEKGYLKRMRPDTFNLQTRGTIGKSVGKLR 618

Query: 1251 VNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERITS 1072
            VNDTMS+FLVCR+HD+VLYFSD+G VYSARAYKIPECSR AAGTPLV ILSL++GERITS
Sbjct: 619  VNDTMSDFLVCRTHDYVLYFSDKGTVYSARAYKIPECSRAAAGTPLVHILSLSEGERITS 678

Query: 1071 IIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNEDL 892
            IIPVSEF GDQYL+MLT+ GYIKKVSLNYFS+IR TGIIAIQLVPGDELKWVR CTN++ 
Sbjct: 679  IIPVSEFEGDQYLMMLTVKGYIKKVSLNYFSSIRCTGIIAIQLVPGDELKWVRRCTNDEF 738

Query: 891  IGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSSVNR 712
            + MASQNGMVILS CE +RALGRNTRG VAMRLK  DKMAC+DIIPA+ G  L++    +
Sbjct: 739  VAMASQNGMVILSPCEKVRALGRNTRGGVAMRLKPEDKMACIDIIPASFGTKLEKGIETQ 798

Query: 711  RI---DLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSL 541
            +      + PWLLF+SESG GKRVPL+SFR+S LN+VGL GYK + E+RL AV+VVG+S+
Sbjct: 799  QTHGKGSTGPWLLFISESGFGKRVPLASFRMSPLNRVGLKGYKFSLENRLAAVFVVGFSV 858

Query: 540  AEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
             EDGESDEQ+VLVSQSGTVNRIKVRD+S+QSR+ARGVILMRL+H GKIQSASLIS
Sbjct: 859  GEDGESDEQVVLVSQSGTVNRIKVRDISVQSRYARGVILMRLEHAGKIQSASLIS 913


>ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X2 [Cicer arietinum]
          Length = 944

 Score = 1303 bits (3373), Expect = 0.0
 Identities = 665/851 (78%), Positives = 752/851 (88%), Gaps = 11/851 (1%)
 Frame = -3

Query: 2895 SLVLKERNG------RDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRI 2734
            SL + + NG       +G+IV  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRRI
Sbjct: 79   SLAVIDGNGGGGDKRNEGRIVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRI 138

Query: 2733 LFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGN 2554
            LFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGD+AVYD++VRMAQDFS+R PL+ GHGN
Sbjct: 139  LFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSMVRMAQDFSLRSPLVNGHGN 198

Query: 2553 FGSIDADPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLL 2374
            FGSIDADPPAAMRYTECRL  L EA+LL DL QDTVDF PNFDNSQKEPS+LPAR+PTLL
Sbjct: 199  FGSIDADPPAAMRYTECRLEELAEAMLLADLDQDTVDFAPNFDNSQKEPSVLPARLPTLL 258

Query: 2373 LNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEAT--LQELLECMPGPDFPTGGLIMG 2200
            LNGSSGIAVGMATNIPPHNLGE+VD L V+IHNPEAT  LQELLE MPGPDFPTGGLIMG
Sbjct: 259  LNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPEATVSLQELLEYMPGPDFPTGGLIMG 318

Query: 2199 NIGILEAYRTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENK 2020
            N+GILEAYRTG+GR++VRGKTD+ELLDSKTK TA+IIKE+PYQTNK+ALVEKIAELVENK
Sbjct: 319  NLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIIIKEIPYQTNKAALVEKIAELVENK 378

Query: 2019 SIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKL 1840
            S+EGISDIRDESDR+GMRIVIELKRGSD  IVLNNLYRLT+LQS+FSCNMVGIL+GQPK 
Sbjct: 379  SLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQ 438

Query: 1839 MGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNT 1660
            MGLKELLQAFLDFRCSV+ERRARF+LS AQ+R+H+VEGI+VG  N+D VIRIIRE+ +NT
Sbjct: 439  MGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVEGILVGFNNLDRVIRIIREASSNT 498

Query: 1659 MASALLRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQI 1480
            +A+A LR E+ LSEKQAEALLD++LR+LT  ES  FV E K L EQISKL ELLSS+K I
Sbjct: 499  IAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFVAENKSLVEQISKLEELLSSRKNI 558

Query: 1479 LQMIEQEAIEVKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTF 1300
            L++IEQEAI++KNKFA                +IDVIPNEEMLLALSEKGYLKRMKPSTF
Sbjct: 559  LELIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVIPNEEMLLALSEKGYLKRMKPSTF 618

Query: 1299 NLQNRGTIGKSVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGT 1120
            NLQNRGTIGKSVG +++ND+MS+F+VCR+HD+VLYFSD+G VYSARAYKIPECSRTAAGT
Sbjct: 619  NLQNRGTIGKSVGKLKMNDSMSDFIVCRAHDYVLYFSDKGTVYSARAYKIPECSRTAAGT 678

Query: 1119 PLVRILSLADGERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLV 940
            PLV+ILSL+DGERITSIIPVSEF  DQ+L+MLTM GYIK+V LN FS+IR+TGIIAIQLV
Sbjct: 679  PLVQILSLSDGERITSIIPVSEFTEDQFLLMLTMQGYIKRVPLNSFSSIRSTGIIAIQLV 738

Query: 939  PGDELKWVRCCTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDI 760
            PGD+LKWVRCCTN+D + MAS NGMVILS C  +R LGRNTRG +AMRL+ GD+MA +DI
Sbjct: 739  PGDKLKWVRCCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRGGLAMRLREGDRMASVDI 798

Query: 759  IPAAMGKNLQRSSV---NRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKL 589
            IPA+M  +L+  S    N     + PWLLFVSESG GKRVPLS FR+SSLN+VGLIGYK 
Sbjct: 799  IPASMWNDLETISKLPGNNVKSHNGPWLLFVSESGYGKRVPLSFFRMSSLNRVGLIGYKF 858

Query: 588  ASEDRLVAVYVVGYSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDH 409
            ++EDRL +V+VVG+SLAEDGESDEQ+VLVSQSGTVNRIKVRD+SIQSRFARGVILMRLDH
Sbjct: 859  SAEDRLASVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRLDH 918

Query: 408  TGKIQSASLIS 376
             GKIQSASLIS
Sbjct: 919  AGKIQSASLIS 929


>ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus trichocarpa]
            gi|550330577|gb|EEF01573.2| DNA gyrase subunit A family
            protein [Populus trichocarpa]
          Length = 948

 Score = 1301 bits (3367), Expect = 0.0
 Identities = 662/847 (78%), Positives = 746/847 (88%), Gaps = 7/847 (0%)
 Frame = -3

Query: 2895 SLVLKERNGR-----DGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRIL 2731
            SL++K+ NG      +G++V  ELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRIL
Sbjct: 81   SLLVKDPNGGSPGGGNGRVVQTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRIL 140

Query: 2730 FAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNF 2551
            FAMHELGLSS+KPFKKCARVVGEVLGKFHPHGDTAVYD LVRMAQDFS+RCPLIQGHGNF
Sbjct: 141  FAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDALVRMAQDFSLRCPLIQGHGNF 200

Query: 2550 GSIDADPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLL 2371
            GS+DADPPAAMRYTECRL  LTEAV L DL QDTVDFVPNFDNSQKEPSL P R+PTLLL
Sbjct: 201  GSVDADPPAAMRYTECRLDGLTEAVFLADLEQDTVDFVPNFDNSQKEPSLFPTRLPTLLL 260

Query: 2370 NGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIG 2191
            NGSSGIAVGMAT IPPHNLGELVD L  LIHNPEATLQELLE MPGPDFPTGG+IMGN G
Sbjct: 261  NGSSGIAVGMATKIPPHNLGELVDVLCALIHNPEATLQELLEYMPGPDFPTGGIIMGNQG 320

Query: 2190 ILEAYRTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIE 2011
            IL+AYR+G+GRIVVRGKTDVELLDSKTK  AVIIKE+PYQTNK++LVEKIAELVE+K+++
Sbjct: 321  ILDAYRSGQGRIVVRGKTDVELLDSKTKRNAVIIKEIPYQTNKASLVEKIAELVEDKNLD 380

Query: 2010 GISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGL 1831
            GISDIRDESDR+GMRIVIELKRG+D SIVLNNLYRLT LQSSFSCNMVGILDGQPK MGL
Sbjct: 381  GISDIRDESDRSGMRIVIELKRGADPSIVLNNLYRLTPLQSSFSCNMVGILDGQPKQMGL 440

Query: 1830 KELLQAFLDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMAS 1651
            KELLQAFLDFRCSV+ERRA FKLS AQ+R+HIVEG++ GL N+D V+ IIR++ +N +AS
Sbjct: 441  KELLQAFLDFRCSVVERRAMFKLSEAQKRRHIVEGVMAGLDNLDRVVDIIRKASSNAIAS 500

Query: 1650 ALLRKEYGLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQM 1471
            A LR E+ LSEKQAEA+LDI+LR+LT LE KKFV+E K L EQI+KL ELLSS+  ILQ+
Sbjct: 501  ADLRNEFSLSEKQAEAILDISLRRLTLLEGKKFVEESKSLMEQITKLEELLSSRGNILQL 560

Query: 1470 IEQEAIEVKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQ 1291
            IEQEA+E+KNKF+                +IDVIPNEEMLLA+SEKGY+KRMKP+TFNLQ
Sbjct: 561  IEQEAVELKNKFSNPRRSMLEDSDSGQLEDIDVIPNEEMLLAISEKGYVKRMKPNTFNLQ 620

Query: 1290 NRGTIGKSVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLV 1111
            NRGTIGKSVG +R +D MS+F+VC +HD VLYFSD+G+VYSA AYKIPEC+R AAGTPL+
Sbjct: 621  NRGTIGKSVGKLRDSDAMSDFIVCHAHDRVLYFSDQGIVYSAPAYKIPECTRAAAGTPLI 680

Query: 1110 RILSLADGERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGD 931
            + LSL+DGERITSIIPVSEFV DQ+L+MLT+NGYIKKVSLN FSAIR+TGIIAIQLVPGD
Sbjct: 681  QFLSLSDGERITSIIPVSEFVEDQFLLMLTVNGYIKKVSLNSFSAIRSTGIIAIQLVPGD 740

Query: 930  ELKWVRCCTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPA 751
            ELKWVRCCTN DL+ MASQNGMVIL+SCE +RALGRNTRG VAMRL+ GDK+A MDIIPA
Sbjct: 741  ELKWVRCCTNGDLVAMASQNGMVILTSCENIRALGRNTRGGVAMRLREGDKIASMDIIPA 800

Query: 750  AMGKNLQRSSVNRRIDL--SAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASED 577
            ++ K+L+ +S +   +   + PWLLFVSESG GKRVPLSSF+ S LN+VGLIGYK   ED
Sbjct: 801  SLQKDLEVASKDSENNNKGTGPWLLFVSESGHGKRVPLSSFKQSRLNRVGLIGYKFFEED 860

Query: 576  RLVAVYVVGYSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKI 397
             L AV+ VG+SL EDGESDEQ+VLVSQSGTVNRIKVRD+SIQSRFARGVILMRL+H GKI
Sbjct: 861  HLAAVFAVGFSLTEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRLEHAGKI 920

Query: 396  QSASLIS 376
            QS SLIS
Sbjct: 921  QSTSLIS 927


>ref|XP_006347707.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X2 [Solanum tuberosum]
          Length = 996

 Score = 1297 bits (3357), Expect = 0.0
 Identities = 663/890 (74%), Positives = 758/890 (85%), Gaps = 50/890 (5%)
 Frame = -3

Query: 2895 SLVLKERNGRDG--------KIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHR 2740
            S++L++R+G +G        +IV  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHR
Sbjct: 87   SVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHR 146

Query: 2739 RILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGH 2560
            RIL+AMHELGLSS+KP+KKCARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+R PLI+GH
Sbjct: 147  RILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIRGH 206

Query: 2559 GNFGSIDADPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPT 2380
            GNFGSIDADPPAAMRYTECRL ALTEA+LL DL Q+TVDFVPNFDNSQKEPSLLPARIP 
Sbjct: 207  GNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQKEPSLLPARIPN 266

Query: 2379 LLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMG 2200
            LLLNG+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLE MPGPDFPTGG+IMG
Sbjct: 267  LLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMG 326

Query: 2199 NIGILEAYRTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENK 2020
            NIGILEAYRTG+GR+V+RGKTD+ELLD+KTK  A+II+E+PYQTNK++LVEKIA+LVENK
Sbjct: 327  NIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKASLVEKIADLVENK 386

Query: 2019 SIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKL 1840
            ++EG+SDIRDESDR+GMR+VIELKRGSD +IVLNNLYRLTALQSSFSCNMVGIL+GQPKL
Sbjct: 387  TLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILNGQPKL 446

Query: 1839 MGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVE----------------------- 1729
            MGLKELLQAFLDFRCSV+ERRA++KLS AQER HIVE                       
Sbjct: 447  MGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVERPKQVLPTRRQAYASYQEKSSFP 506

Query: 1728 -----------------GIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEKQAEAL 1600
                             GII+GL N+D VI+ IR++ ++ +A+A LRKE+ L+EKQAEA+
Sbjct: 507  FCNFLLGIIPSSSNHLMGIIIGLDNLDEVIKTIRKASSHALATANLRKEFELTEKQAEAI 566

Query: 1599 LDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKFAXXXX 1420
            LDI+LR+LT+LE  KFVDEGK L  QISKL ELLSSKKQILQ+IE+EA+E+K+K+     
Sbjct: 567  LDISLRRLTALERNKFVDEGKSLRAQISKLEELLSSKKQILQLIEEEALEIKDKYFTPRR 626

Query: 1419 XXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTMRVNDT 1240
                        +IDVIPNEEMLLA+SEKGY+KRMKP TFNLQNRGTIGKSVG +RVND 
Sbjct: 627  SQLEDTDSGNLEDIDVIPNEEMLLAISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDA 686

Query: 1239 MSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERITSIIPV 1060
            MS+FLVCR+HD VLYFSD+G VYS  AYKIPECSRTAAGTPL++ILSL+DGERITSIIPV
Sbjct: 687  MSDFLVCRAHDKVLYFSDKGTVYSYPAYKIPECSRTAAGTPLIQILSLSDGERITSIIPV 746

Query: 1059 SEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNEDLIGMA 880
            SEFVGDQYLVMLT+NGYIKKVSLNYF++IR+TGIIAIQLVPGDELKWV+CC+N D + MA
Sbjct: 747  SEFVGDQYLVMLTVNGYIKKVSLNYFASIRSTGIIAIQLVPGDELKWVKCCSNNDFVAMA 806

Query: 879  SQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSSV--NRRI 706
            S NGMVIL+ C  +RALGRNTRGSVAMRLK GDK+A MDIIP A+ K L  +     R+ 
Sbjct: 807  SLNGMVILTPCANIRALGRNTRGSVAMRLKDGDKVASMDIIPDALQKELDMTLAVHQRKR 866

Query: 705  DLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSLAEDGE 526
             ++ PWLLFVSESG GKRVP+S FR S LN+VGLIGYK +SEDRL AV+VVG+S  EDGE
Sbjct: 867  SMNGPWLLFVSESGYGKRVPVSRFRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSFGEDGE 926

Query: 525  SDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            SDEQ+VLVSQSGTVNRIKV+D+SIQSR+ARGVILMRL+H GKIQSASLIS
Sbjct: 927  SDEQVVLVSQSGTVNRIKVQDISIQSRYARGVILMRLEHAGKIQSASLIS 976


>ref|XP_006347706.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X1 [Solanum tuberosum]
          Length = 997

 Score = 1296 bits (3355), Expect = 0.0
 Identities = 665/892 (74%), Positives = 759/892 (85%), Gaps = 52/892 (5%)
 Frame = -3

Query: 2895 SLVLKERNGRDG--------KIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHR 2740
            S++L++R+G +G        +IV  ELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHR
Sbjct: 87   SVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHR 146

Query: 2739 RILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGH 2560
            RIL+AMHELGLSS+KP+KKCARVVGEVLGKFHPHGD AVYD+LVRMAQDFS+R PLI+GH
Sbjct: 147  RILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIRGH 206

Query: 2559 GNFGSIDADPPAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPT 2380
            GNFGSIDADPPAAMRYTECRL ALTEA+LL DL Q+TVDFVPNFDNSQKEPSLLPARIP 
Sbjct: 207  GNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQKEPSLLPARIPN 266

Query: 2379 LLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMG 2200
            LLLNG+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLE MPGPDFPTGG+IMG
Sbjct: 267  LLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMG 326

Query: 2199 NIGILEAYRTGKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENK 2020
            NIGILEAYRTG+GR+V+RGKTD+ELLD+KTK  A+II+E+PYQTNK++LVEKIA+LVENK
Sbjct: 327  NIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKASLVEKIADLVENK 386

Query: 2019 SIEGISDIRDESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKL 1840
            ++EG+SDIRDESDR+GMR+VIELKRGSD +IVLNNLYRLTALQSSFSCNMVGIL+GQPKL
Sbjct: 387  TLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILNGQPKL 446

Query: 1839 MGLKELLQAFLDFRCSVIERRARFKLSHAQERKHIVE----------------------- 1729
            MGLKELLQAFLDFRCSV+ERRA++KLS AQER HIVE                       
Sbjct: 447  MGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVERPKQVLPTRRQAYASYQEKSSFP 506

Query: 1728 -----------------GIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEKQAEAL 1600
                             GII+GL N+D VI+ IR++ ++ +A+A LRKE+ L+EKQAEA+
Sbjct: 507  FCNFLLGIIPSSSNHLMGIIIGLDNLDEVIKTIRKASSHALATANLRKEFELTEKQAEAI 566

Query: 1599 LDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKFAXXXX 1420
            LDI+LR+LT+LE  KFVDEGK L  QISKL ELLSSKKQILQ+IE+EA+E+K+K+     
Sbjct: 567  LDISLRRLTALERNKFVDEGKSLRAQISKLEELLSSKKQILQLIEEEALEIKDKYFTPRR 626

Query: 1419 XXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTMRVNDT 1240
                        +IDVIPNEEMLLA+SEKGY+KRMKP TFNLQNRGTIGKSVG +RVND 
Sbjct: 627  SQLEDTDSGNLEDIDVIPNEEMLLAISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDA 686

Query: 1239 MSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERITSIIPV 1060
            MS+FLVCR+HD VLYFSD+G VYS  AYKIPECSRTAAGTPL++ILSL+DGERITSIIPV
Sbjct: 687  MSDFLVCRAHDKVLYFSDKGTVYSYPAYKIPECSRTAAGTPLIQILSLSDGERITSIIPV 746

Query: 1059 SEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNEDLIGMA 880
            SEFVGDQYLVMLT+NGYIKKVSLNYF++IR+TGIIAIQLVPGDELKWV+CC+N D + MA
Sbjct: 747  SEFVGDQYLVMLTVNGYIKKVSLNYFASIRSTGIIAIQLVPGDELKWVKCCSNNDFVAMA 806

Query: 879  SQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSSV----NR 712
            S NGMVIL+ C  +RALGRNTRGSVAMRLK GDK+A MDIIP A+ K L  +      NR
Sbjct: 807  SLNGMVILTPCANIRALGRNTRGSVAMRLKDGDKVASMDIIPDALQKELDMTLAVHQRNR 866

Query: 711  RIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSLAED 532
            R  ++ PWLLFVSESG GKRVP+S FR S LN+VGLIGYK +SEDRL AV+VVG+S  ED
Sbjct: 867  R-SMNGPWLLFVSESGYGKRVPVSRFRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSFGED 925

Query: 531  GESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            GESDEQ+VLVSQSGTVNRIKV+D+SIQSR+ARGVILMRL+H GKIQSASLIS
Sbjct: 926  GESDEQVVLVSQSGTVNRIKVQDISIQSRYARGVILMRLEHAGKIQSASLIS 977


>ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [Amborella trichopoda]
            gi|548835451|gb|ERM97286.1| hypothetical protein
            AMTR_s00119p00135690 [Amborella trichopoda]
          Length = 963

 Score = 1295 bits (3351), Expect = 0.0
 Identities = 654/838 (78%), Positives = 742/838 (88%)
 Frame = -3

Query: 2889 VLKERNGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELG 2710
            V+ +    + ++V  ELHKEATE+Y+AYA+SVL+GRALPDVRDGLKPVHRRI+FAMHELG
Sbjct: 114  VMVKEKAFEARVVMAELHKEATESYLAYALSVLVGRALPDVRDGLKPVHRRIIFAMHELG 173

Query: 2709 LSSRKPFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADP 2530
             SSRKPFKKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFSMRCPLIQGHGNFGSIDADP
Sbjct: 174  FSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSMRCPLIQGHGNFGSIDADP 233

Query: 2529 PAAMRYTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIA 2350
            PAAMRYTECRL ALTEA+ L DL Q+TV+FVPNFD SQKEPSLLPAR+P LLLNGSSGIA
Sbjct: 234  PAAMRYTECRLEALTEAMFLSDLEQNTVNFVPNFDGSQKEPSLLPARVPNLLLNGSSGIA 293

Query: 2349 VGMATNIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRT 2170
            VGMATNIPPHNLGELVDALSVL+HNP+ATLQELLE MPGPDFPTGG IMGNIGIL+AYRT
Sbjct: 294  VGMATNIPPHNLGELVDALSVLLHNPDATLQELLEYMPGPDFPTGGEIMGNIGILDAYRT 353

Query: 2169 GKGRIVVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRD 1990
            G+GRIVVRGKTDVE+LD+K K +A++I+E+PYQTNK++LVEKIAELVE+KSIEG+SDIRD
Sbjct: 354  GRGRIVVRGKTDVEVLDAKGKLSALVIREIPYQTNKASLVEKIAELVEDKSIEGVSDIRD 413

Query: 1989 ESDRTGMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAF 1810
            ESDR+GMRIVIELK+GSD SIVLN LY+LT LQSSFSCNMVGILDGQPKLMGLKE+LQAF
Sbjct: 414  ESDRSGMRIVIELKKGSDPSIVLNKLYKLTVLQSSFSCNMVGILDGQPKLMGLKEMLQAF 473

Query: 1809 LDFRCSVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEY 1630
            LDFRCSVIERRARFKL  AQER+HI+EGI+VGL N+D VI +IRE+ + +MASA L+K Y
Sbjct: 474  LDFRCSVIERRARFKLKQAQEREHIIEGILVGLDNLDDVIHLIRENSSLSMASAALKKAY 533

Query: 1629 GLSEKQAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIE 1450
             LS+KQAEALLDITLRKLTSLE KKFV+EG+ L EQISKLNELLSSKK + QMIEQEAIE
Sbjct: 534  NLSDKQAEALLDITLRKLTSLERKKFVEEGESLKEQISKLNELLSSKKLVYQMIEQEAIE 593

Query: 1449 VKNKFAXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGK 1270
            VKNKF                 EIDVIPNEEMLL  SEKGY+KRM+P+TF+LQNRGTIGK
Sbjct: 594  VKNKFRTPRRSSLEEGDGSQLEEIDVIPNEEMLLVFSEKGYVKRMRPNTFSLQNRGTIGK 653

Query: 1269 SVGTMRVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLAD 1090
            SVG MRVND +S+F+VC +HDHVLYFSD+G+VYSARA++IPEC+RTAAGTPLV+ILSL+D
Sbjct: 654  SVGKMRVNDALSDFIVCHAHDHVLYFSDKGIVYSARAFRIPECTRTAAGTPLVQILSLSD 713

Query: 1089 GERITSIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRC 910
            GERITS+IPVSEFV DQYL+MLT  G+IKK+SL +FSAIR TGIIAIQLVPGDELKWVR 
Sbjct: 714  GERITSVIPVSEFVKDQYLIMLTAKGFIKKISLEFFSAIRITGIIAIQLVPGDELKWVRL 773

Query: 909  CTNEDLIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQ 730
            C+N+DLI MASQ+GMV+LSSCETLRA+GR  RG V+MRLK GD+MA MDIIPAAM KNLQ
Sbjct: 774  CSNDDLIAMASQSGMVLLSSCETLRAIGRTARGVVSMRLKDGDRMASMDIIPAAMQKNLQ 833

Query: 729  RSSVNRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVG 550
            +       DLSAPWLLFV+ESG GKRVP+SSFR++   + G+IGYKL   D L AV+ VG
Sbjct: 834  KEGK----DLSAPWLLFVTESGYGKRVPVSSFRMTRFRRKGVIGYKLPPNDGLAAVFAVG 889

Query: 549  YSLAEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            +SL+ DGESDEQ+VLVSQSGTVNRIKVRD+SIQSR A GVILMRL+  GKI SASL+S
Sbjct: 890  FSLSADGESDEQVVLVSQSGTVNRIKVRDISIQSRSAMGVILMRLEFAGKIMSASLMS 947


>ref|XP_006296680.1| hypothetical protein CARUB_v10012909mg [Capsella rubella]
            gi|482565389|gb|EOA29578.1| hypothetical protein
            CARUB_v10012909mg [Capsella rubella]
          Length = 950

 Score = 1263 bits (3268), Expect = 0.0
 Identities = 626/835 (74%), Positives = 733/835 (87%), Gaps = 2/835 (0%)
 Frame = -3

Query: 2874 NGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRK 2695
            +G D +IVP ELHKEATE+YM+YA+SVLLGRALPDVRDGLKPVHRRILFAMHELG+SS+K
Sbjct: 95   SGDDSRIVPFELHKEATESYMSYALSVLLGRALPDVRDGLKPVHRRILFAMHELGMSSKK 154

Query: 2694 PFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMR 2515
            P+KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQ FS+RCPLIQGHGNFGSIDADPPAAMR
Sbjct: 155  PYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLRCPLIQGHGNFGSIDADPPAAMR 214

Query: 2514 YTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMAT 2335
            YTECRL  L EAVLL DL QDTVDFV NFDNSQKEP++LPAR+P LLLNG+SGIAVGMAT
Sbjct: 215  YTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAVLPARLPALLLNGASGIAVGMAT 274

Query: 2334 NIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGKGRI 2155
            NIPPHNLGELVD L  LIHNPEATLQELLE MP PDFPTGG+IMGN+G+L+AYRTG+GR+
Sbjct: 275  NIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFPTGGIIMGNLGVLDAYRTGRGRV 334

Query: 2154 VVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRT 1975
            VVRGK +VELLD KTK  AVII E+PYQTNK+ LV+KIAELVENK++EGISDIRDESDR 
Sbjct: 335  VVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKIAELVENKTLEGISDIRDESDRN 394

Query: 1974 GMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRC 1795
            GMR+VIELKRG D ++VLNNLYR TALQSSFSCNMVGI DG+PKLMGLKELLQAF+DFRC
Sbjct: 395  GMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGICDGEPKLMGLKELLQAFIDFRC 454

Query: 1794 SVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEK 1615
            SV+ERRARFKLSHAQ+RKHI+EGI+VGL N+D VI++I+ + +++ A+  L+ EYGLSEK
Sbjct: 455  SVVERRARFKLSHAQQRKHIIEGIVVGLDNMDKVIQLIKNATSHSSAATALQSEYGLSEK 514

Query: 1614 QAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKF 1435
            QA+A+L+I+LR+LT+LE KKF DE   LTEQI+KL +LLS++  IL++IEQEAIE+K++F
Sbjct: 515  QADAILEISLRRLTALERKKFTDESSSLTEQITKLEQLLSTRTNILKLIEQEAIELKDRF 574

Query: 1434 AXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTM 1255
            +                +IDVIPNEEML+A+SEKGY+KRMKP TFNLQ+RGTIGKSVG +
Sbjct: 575  SSPRRSMLEDSDSGDLEDIDVIPNEEMLMAISEKGYVKRMKPDTFNLQHRGTIGKSVGKL 634

Query: 1254 RVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERIT 1075
            RV+D MS+FLVC +HDHVL+FSDRG+VYS RAYKIPECSR AAGTPLV+ILS+++GER+T
Sbjct: 635  RVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYKIPECSRNAAGTPLVQILSMSEGERVT 694

Query: 1074 SIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNED 895
            SI+PVSEF  D+YL+MLT+NG IKKVSL  FS IR+TGIIAIQL  GDELKWVRCC+++D
Sbjct: 695  SIVPVSEFAEDRYLLMLTVNGCIKKVSLKLFSGIRSTGIIAIQLNSGDELKWVRCCSSDD 754

Query: 894  LIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSS-- 721
            L+ MASQNGMV+LS+C+ +R L RNT+G  AMRLK  DKMA MDIIP+++ K+++  S  
Sbjct: 755  LVAMASQNGMVVLSTCDGVRTLSRNTKGVTAMRLKKEDKMASMDIIPSSLRKDMEEKSED 814

Query: 720  VNRRIDLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSL 541
            ++     + PWLLFV E+G GKRVPLSSFR S LN+VGL+GYK A +DRL AV+VVGYSL
Sbjct: 815  ISTVKQSTGPWLLFVCENGYGKRVPLSSFRRSRLNRVGLLGYKFAEDDRLAAVFVVGYSL 874

Query: 540  AEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            AEDGESDEQ+VLVSQSGTVNRIKVRD+SIQSR ARGVILMRLDH GKIQSASLIS
Sbjct: 875  AEDGESDEQVVLVSQSGTVNRIKVRDISIQSRRARGVILMRLDHAGKIQSASLIS 929


>ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana]
            gi|110808536|sp|Q9CAF6.2|GYRA_ARATH RecName:
            Full=Probable DNA gyrase subunit A,
            chloroplastic/mitochondrial; Flags: Precursor
            gi|332641422|gb|AEE74943.1| DNA gyrase subunit A
            [Arabidopsis thaliana]
          Length = 950

 Score = 1260 bits (3260), Expect = 0.0
 Identities = 627/835 (75%), Positives = 730/835 (87%), Gaps = 2/835 (0%)
 Frame = -3

Query: 2874 NGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRK 2695
            +G + +IVP ELHKEATE+YM+YA+SVLLGRALPDVRDGLKPVHRRILFAMHELG+SS+K
Sbjct: 95   SGDESRIVPFELHKEATESYMSYALSVLLGRALPDVRDGLKPVHRRILFAMHELGMSSKK 154

Query: 2694 PFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMR 2515
            P+KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQ FS+RCPLIQGHGNFGSIDADPPAAMR
Sbjct: 155  PYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLRCPLIQGHGNFGSIDADPPAAMR 214

Query: 2514 YTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMAT 2335
            YTECRL  L EAVLL DL QDTVDFV NFDNSQKEP++LPAR+P LLLNG+SGIAVGMAT
Sbjct: 215  YTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAVLPARLPALLLNGASGIAVGMAT 274

Query: 2334 NIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGKGRI 2155
            NIPPHNLGELVD L  LIHNPEATLQELLE MP PDFPTGG+IMGN+G+L+AYRTG+GR+
Sbjct: 275  NIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFPTGGIIMGNLGVLDAYRTGRGRV 334

Query: 2154 VVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRT 1975
            VVRGK +VELLD KTK  AVII E+PYQTNK+ LV+KIAELVENK++EGISDIRDESDR 
Sbjct: 335  VVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKIAELVENKTLEGISDIRDESDRN 394

Query: 1974 GMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRC 1795
            GMR+VIELKRG D ++VLNNLYR TALQSSFSCNMVGI DG+PKLMGLKELLQAF+DFRC
Sbjct: 395  GMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGICDGEPKLMGLKELLQAFIDFRC 454

Query: 1794 SVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEK 1615
            SV+ERRARFKLSHAQ+RKHI+EGI+VGL N+D VI +I ++ +++ A+A L+ EYGLSEK
Sbjct: 455  SVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIELITKASSHSSATAALQSEYGLSEK 514

Query: 1614 QAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKF 1435
            QAEA+L+ITLR+LT+LE KKF DE   LTEQI+KL +LLS++  IL++IEQEAIE+K++F
Sbjct: 515  QAEAILEITLRRLTALERKKFTDESSSLTEQITKLEQLLSTRTNILKLIEQEAIELKDRF 574

Query: 1434 AXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTM 1255
            +                +IDVIPNEEML+A+SEKGY+KRMK  TFNLQ+RGTIGKSVG +
Sbjct: 575  SSPRRSMLEDSDSGDLEDIDVIPNEEMLMAVSEKGYVKRMKADTFNLQHRGTIGKSVGKL 634

Query: 1254 RVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERIT 1075
            RV+D MS+FLVC +HDHVL+FSDRG+VYS RAYKIPECSR AAGTPLV+ILS+++GER+T
Sbjct: 635  RVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYKIPECSRNAAGTPLVQILSMSEGERVT 694

Query: 1074 SIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNED 895
            SI+PVSEF  D+YL+MLT+NG IKKVSL  FS IR+TGIIAIQL  GDELKWVRCC+++D
Sbjct: 695  SIVPVSEFAEDRYLLMLTVNGCIKKVSLKLFSGIRSTGIIAIQLNSGDELKWVRCCSSDD 754

Query: 894  LIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSSVN 715
            L+ MASQNGMV LS+C+ +R L RNT+G  AMRLK  DK+A MDIIPA++ K+++  S +
Sbjct: 755  LVAMASQNGMVALSTCDGVRTLSRNTKGVTAMRLKNEDKIASMDIIPASLRKDMEEKSED 814

Query: 714  RRI--DLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSL 541
              +    + PWLLFV E+G GKRVPLSSFR S LN+VGL GYK A +DRL AV+VVGYSL
Sbjct: 815  ASLVKQSTGPWLLFVCENGYGKRVPLSSFRRSRLNRVGLSGYKFAEDDRLAAVFVVGYSL 874

Query: 540  AEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            AEDGESDEQ+VLVSQSGTVNRIKVRD+SIQSR ARGVILMRLDH GKIQSASLIS
Sbjct: 875  AEDGESDEQVVLVSQSGTVNRIKVRDISIQSRRARGVILMRLDHAGKIQSASLIS 929


>ref|XP_002884807.1| DNA gyrase subunit A family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297330647|gb|EFH61066.1| DNA gyrase subunit A
            family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 950

 Score = 1259 bits (3257), Expect = 0.0
 Identities = 626/835 (74%), Positives = 730/835 (87%), Gaps = 2/835 (0%)
 Frame = -3

Query: 2874 NGRDGKIVPIELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRK 2695
            +G + +IVP ELHKEATE+YMAYA+SVLLGRALPDVRDGLKPVHRRILFAMHELG+SS+K
Sbjct: 95   SGDESRIVPFELHKEATESYMAYALSVLLGRALPDVRDGLKPVHRRILFAMHELGMSSKK 154

Query: 2694 PFKKCARVVGEVLGKFHPHGDTAVYDTLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMR 2515
            P+KKCARVVGEVLGKFHPHGDTAVYD+LVRMAQ FS+RCPLIQGHGNFGSIDADPPAAMR
Sbjct: 155  PYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLRCPLIQGHGNFGSIDADPPAAMR 214

Query: 2514 YTECRLGALTEAVLLEDLHQDTVDFVPNFDNSQKEPSLLPARIPTLLLNGSSGIAVGMAT 2335
            YTECRL  L EAVLL DL QDTVDFV NFDNSQKEP++LPAR+P LLLNG+SGIAVGMAT
Sbjct: 215  YTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAVLPARLPALLLNGASGIAVGMAT 274

Query: 2334 NIPPHNLGELVDALSVLIHNPEATLQELLECMPGPDFPTGGLIMGNIGILEAYRTGKGRI 2155
            NIPPHNLGELVD L  LIHNPEATLQELLE MP PDFPTGG+IMGN+G+L+AYRTG+GR+
Sbjct: 275  NIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFPTGGIIMGNLGVLDAYRTGRGRV 334

Query: 2154 VVRGKTDVELLDSKTKCTAVIIKEVPYQTNKSALVEKIAELVENKSIEGISDIRDESDRT 1975
            VVRGK +VELLD KTK  AVII E+PYQTNK+ LV+KIAELVENK++EGISDIRDESDR 
Sbjct: 335  VVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKIAELVENKTLEGISDIRDESDRN 394

Query: 1974 GMRIVIELKRGSDSSIVLNNLYRLTALQSSFSCNMVGILDGQPKLMGLKELLQAFLDFRC 1795
            GMR+VIELKRG D ++VLNNLYR TALQSSFSCNMVGI DG+PKLMGLKELLQAF+DFRC
Sbjct: 395  GMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGICDGEPKLMGLKELLQAFIDFRC 454

Query: 1794 SVIERRARFKLSHAQERKHIVEGIIVGLQNIDGVIRIIRESPNNTMASALLRKEYGLSEK 1615
            SV+ERRARFKLSHAQ+RKH +EGI+VGL N+D VI++I+ + +++ ASA L+ EYGLSEK
Sbjct: 455  SVVERRARFKLSHAQQRKHNIEGIVVGLDNVDEVIKLIKNASSHSSASAALQSEYGLSEK 514

Query: 1614 QAEALLDITLRKLTSLESKKFVDEGKVLTEQISKLNELLSSKKQILQMIEQEAIEVKNKF 1435
            QAEA+L+ITLR+LT+LE KK  DE   LTEQI+KL +LLS++  IL++IEQEAIE+K++F
Sbjct: 515  QAEAILEITLRRLTTLERKKVTDESSSLTEQITKLEQLLSTRANILKLIEQEAIELKDRF 574

Query: 1434 AXXXXXXXXXXXXXXXXEIDVIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGTM 1255
            +                +IDVIPNEEML+A+SEKGY+K+MK  TFNLQ+RGTIGKSVG +
Sbjct: 575  SSPRRSMLEDSDSGDLEDIDVIPNEEMLMAISEKGYVKKMKADTFNLQHRGTIGKSVGKL 634

Query: 1254 RVNDTMSEFLVCRSHDHVLYFSDRGVVYSARAYKIPECSRTAAGTPLVRILSLADGERIT 1075
            RV+D MS+FLVC +HDHVL+FSDRG+VYS RAYKIPECSR AAGTPLV+ILS+++GER+T
Sbjct: 635  RVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYKIPECSRNAAGTPLVQILSMSEGERVT 694

Query: 1074 SIIPVSEFVGDQYLVMLTMNGYIKKVSLNYFSAIRATGIIAIQLVPGDELKWVRCCTNED 895
            SI+PVSEF  D+YL+MLT+NG IKKVSL  FS IR+TGIIAIQL  GDELKWVRCC+++D
Sbjct: 695  SIVPVSEFAEDRYLLMLTVNGCIKKVSLKLFSGIRSTGIIAIQLNSGDELKWVRCCSSDD 754

Query: 894  LIGMASQNGMVILSSCETLRALGRNTRGSVAMRLKGGDKMACMDIIPAAMGKNLQRSSVN 715
            L+ MASQNG+V+LS+C+ +R L RNT+G  AMRLK  DK+A MDIIPA++ K+++  S +
Sbjct: 755  LVAMASQNGLVVLSTCDGVRTLSRNTKGVTAMRLKNEDKIASMDIIPASLRKDMEEKSED 814

Query: 714  RRI--DLSAPWLLFVSESGMGKRVPLSSFRLSSLNKVGLIGYKLASEDRLVAVYVVGYSL 541
              I    + PWLLFV E+G GKRVPLSSFR S LN+VGL GYK A +DRL AV+VVGYSL
Sbjct: 815  ASIVKQSTGPWLLFVCENGYGKRVPLSSFRRSRLNRVGLSGYKFAEDDRLAAVFVVGYSL 874

Query: 540  AEDGESDEQLVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHTGKIQSASLIS 376
            AEDGESDEQ+VLVSQSGTVNRIKVRD+SIQSR ARGVILMRLDH GKIQSASLIS
Sbjct: 875  AEDGESDEQVVLVSQSGTVNRIKVRDISIQSRRARGVILMRLDHAGKIQSASLIS 929