BLASTX nr result

ID: Scutellaria24_contig00033872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033872
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus c...    91   1e-16
ref|XP_002519274.1| RNA binding protein, putative [Ricinus commu...    84   1e-14
ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266...    84   2e-14
emb|CBI39618.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_003594681.1| RNA binding protein [Medicago truncatula] gi...    83   3e-14

>ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus communis]
           gi|223548494|gb|EEF49985.1| hypothetical protein
           RCOM_1435690 [Ricinus communis]
          Length = 363

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/83 (45%), Positives = 62/83 (74%)
 Frame = +1

Query: 7   FSEGMLVEVKTDKEGFLGSWLPAVIVKSLRNDKFLVEYRSLRTKDRTELLKEEVGVSCIK 186
           FS+GM +EV +D+EGF G+W  A I++++  DK+L+EY++LRT+D T+ L+EE+ ++ ++
Sbjct: 219 FSKGMEIEVSSDEEGFQGAWFAATIIEAVGKDKYLIEYKNLRTEDDTDFLREEIDIAHLR 278

Query: 187 HCPPFIQRVKPYEYLERVDAWYN 255
            CPP I  V  ++ L+ VDA YN
Sbjct: 279 PCPPEIIMVNSFKLLDEVDALYN 301


>ref|XP_002519274.1| RNA binding protein, putative [Ricinus communis]
           gi|223541589|gb|EEF43138.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 524

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/84 (45%), Positives = 54/84 (64%)
 Frame = +1

Query: 4   KFSEGMLVEVKTDKEGFLGSWLPAVIVKSLRNDKFLVEYRSLRTKDRTELLKEEVGVSCI 183
           +FS+G +VEV+++  GF G+W  A I+  + NDKF V+Y+ L T D T+ L+E+   S I
Sbjct: 390 EFSKGTMVEVRSNAVGFQGAWFAATILNVMENDKFEVKYQRLLTDDETDFLREQASASDI 449

Query: 184 KHCPPFIQRVKPYEYLERVDAWYN 255
           +  PP I+   PY   E VDAWYN
Sbjct: 450 RPSPPHIEHDYPYRLFEMVDAWYN 473



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/83 (40%), Positives = 51/83 (61%)
 Frame = +1

Query: 7   FSEGMLVEVKTDKEGFLGSWLPAVIVKSLRNDKFLVEYRSLRTKDRTELLKEEVGVSCIK 186
           F  G  VEVK+D+EG++G+W  A I+ ++ NDK LV+Y +L T D T  L+E +     +
Sbjct: 178 FRTGTRVEVKSDEEGYVGAWFDANIIGTIGNDKLLVQYLNLVTDDETAPLREVISAEHAR 237

Query: 187 HCPPFIQRVKPYEYLERVDAWYN 255
            CPP I     ++  E+VD W+N
Sbjct: 238 PCPPPIPSDAGFKEFEKVDVWFN 260


>ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266586 [Vitis vinifera]
          Length = 296

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/83 (50%), Positives = 54/83 (65%)
 Frame = +1

Query: 7   FSEGMLVEVKTDKEGFLGSWLPAVIVKSLRNDKFLVEYRSLRTKDRTELLKEEVGVSCIK 186
           FSEG LVEV +D++GF G+W  A IVK +  DK ++EY+SLRT D T+ L+EEV    I+
Sbjct: 159 FSEGTLVEVSSDEDGFQGAWFAATIVKVIGKDKLMIEYKSLRTDDDTDFLREEVDALHIR 218

Query: 187 HCPPFIQRVKPYEYLERVDAWYN 255
             PP    V  +  LE VDA YN
Sbjct: 219 PYPPETVVVDRFNLLEEVDALYN 241


>emb|CBI39618.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/83 (50%), Positives = 54/83 (65%)
 Frame = +1

Query: 7   FSEGMLVEVKTDKEGFLGSWLPAVIVKSLRNDKFLVEYRSLRTKDRTELLKEEVGVSCIK 186
           FSEG LVEV +D++GF G+W  A IVK +  DK ++EY+SLRT D T+ L+EEV    I+
Sbjct: 178 FSEGTLVEVSSDEDGFQGAWFAATIVKVIGKDKLMIEYKSLRTDDDTDFLREEVDALHIR 237

Query: 187 HCPPFIQRVKPYEYLERVDAWYN 255
             PP    V  +  LE VDA YN
Sbjct: 238 PYPPETVVVDRFNLLEEVDALYN 260


>ref|XP_003594681.1| RNA binding protein [Medicago truncatula]
           gi|355483729|gb|AES64932.1| RNA binding protein
           [Medicago truncatula]
          Length = 471

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = +1

Query: 4   KFSEGMLVEVKTDKEGFLGSWLPAVIVKSLRNDKFLVEYRSLRTKD-RTELLKEEVGVSC 180
           KF +G +VEV +D+EG+ G+W  A I+ +L N+KFLVE+R L   D   E+LKEE+    
Sbjct: 66  KFRKGEIVEVSSDEEGYQGAWFVATIIDTLGNEKFLVEHRDLLMNDGGIEVLKEEIETKF 125

Query: 181 IKHCPPFIQRVKPYEYLERVDAWYN 255
           I+ CPP +     ++ L+ VDAWYN
Sbjct: 126 IRPCPPHVPMFGSFKRLQEVDAWYN 150



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/85 (49%), Positives = 55/85 (64%)
 Frame = +1

Query: 1   MKFSEGMLVEVKTDKEGFLGSWLPAVIVKSLRNDKFLVEYRSLRTKDRTELLKEEVGVSC 180
           + F +G  VEVK+D++G+ GSW PA +V   +N K+LVEY +L+T D T+ LKE V VS 
Sbjct: 253 LHFYKGTNVEVKSDEQGYEGSWYPATVVDLYQNGKYLVEYSTLKTDDLTQQLKEVVDVSD 312

Query: 181 IKHCPPFIQRVKPYEYLERVDAWYN 255
           I+  PP I     Y   E VDAWYN
Sbjct: 313 IRPRPPDIDHFCRYVRQEWVDAWYN 337


Top