BLASTX nr result

ID: Scutellaria24_contig00033834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033834
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre...   150   1e-34
ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor...   150   1e-34
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   142   2e-32
emb|CBI15151.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   140   1e-31

>ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor
           ATP-dependent RNA helicase DHX16-like, partial [Cucumis
           sativus]
          Length = 1049

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/112 (68%), Positives = 90/112 (80%)
 Frame = -1

Query: 336 LDRRIKERDAVGTRKMTDQKLTKKEEEEAIRRSDALENDGIGTLRKVSXXXXXXXXXXXX 157
           L+R I+ERDA GT+K+T+QKL++KEEEEAIRRS+ALENDGI TLRKVS            
Sbjct: 177 LERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSEALENDGIDTLRKVSRQEYLKKREEKK 236

Query: 156 XXXXRDDIEDEQYLFEGVKLTEAENRELRYKKQIYELVKKRTEESDYANEYR 1
               RDDIEDEQYLFEGVKLT+AE REL+YKK+IYELVKKRT+E+D  NEYR
Sbjct: 237 LEEIRDDIEDEQYLFEGVKLTDAEYRELKYKKEIYELVKKRTDEADDINEYR 288


>ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Cucumis sativus]
          Length = 1055

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/112 (68%), Positives = 90/112 (80%)
 Frame = -1

Query: 336 LDRRIKERDAVGTRKMTDQKLTKKEEEEAIRRSDALENDGIGTLRKVSXXXXXXXXXXXX 157
           L+R I+ERDA GT+K+T+QKL++KEEEEAIRRS+ALENDGI TLRKVS            
Sbjct: 183 LERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSEALENDGIDTLRKVSRQEYLKKREEKK 242

Query: 156 XXXXRDDIEDEQYLFEGVKLTEAENRELRYKKQIYELVKKRTEESDYANEYR 1
               RDDIEDEQYLFEGVKLT+AE REL+YKK+IYELVKKRT+E+D  NEYR
Sbjct: 243 LEEIRDDIEDEQYLFEGVKLTDAEYRELKYKKEIYELVKKRTDEADDINEYR 294


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/112 (66%), Positives = 87/112 (77%)
 Frame = -1

Query: 336 LDRRIKERDAVGTRKMTDQKLTKKEEEEAIRRSDALENDGIGTLRKVSXXXXXXXXXXXX 157
           L++ ++ERDA GTRK+T+QKLT+KEEEEAIRRS A E D I +LRKVS            
Sbjct: 179 LEQHMRERDAAGTRKLTEQKLTRKEEEEAIRRSKAAEQDDIQSLRKVSRQEYLKKREEKK 238

Query: 156 XXXXRDDIEDEQYLFEGVKLTEAENRELRYKKQIYELVKKRTEESDYANEYR 1
               RDDIEDEQYLFEGVKL+EAE RELRYKK+IYELVKKR+EE+D ANEYR
Sbjct: 239 LEELRDDIEDEQYLFEGVKLSEAEYRELRYKKEIYELVKKRSEEADNANEYR 290


>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/112 (63%), Positives = 87/112 (77%)
 Frame = -1

Query: 336 LDRRIKERDAVGTRKMTDQKLTKKEEEEAIRRSDALENDGIGTLRKVSXXXXXXXXXXXX 157
           L++ I++RDA GTRK+T+QKL++KEEEEAIRRS+A+E D I  LRKVS            
Sbjct: 189 LEQNIRQRDAAGTRKLTEQKLSRKEEEEAIRRSNAMEEDDISALRKVSRQEYLKKREQKK 248

Query: 156 XXXXRDDIEDEQYLFEGVKLTEAENRELRYKKQIYELVKKRTEESDYANEYR 1
               RDDIEDEQYLF+GVKLTEAE RELRYK++IY+LVKKR+EE+D  NEYR
Sbjct: 249 LEELRDDIEDEQYLFDGVKLTEAEQRELRYKREIYDLVKKRSEETDDINEYR 300


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/112 (63%), Positives = 87/112 (77%)
 Frame = -1

Query: 336 LDRRIKERDAVGTRKMTDQKLTKKEEEEAIRRSDALENDGIGTLRKVSXXXXXXXXXXXX 157
           L++ I++RDA GTRK+T+QKL++KEEEEAIRRS+A+E D I  LRKVS            
Sbjct: 189 LEQNIRQRDAAGTRKLTEQKLSRKEEEEAIRRSNAMEEDDISALRKVSRQEYLKKREQKK 248

Query: 156 XXXXRDDIEDEQYLFEGVKLTEAENRELRYKKQIYELVKKRTEESDYANEYR 1
               RDDIEDEQYLF+GVKLTEAE RELRYK++IY+LVKKR+EE+D  NEYR
Sbjct: 249 LEELRDDIEDEQYLFDGVKLTEAEQRELRYKREIYDLVKKRSEETDDINEYR 300


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