BLASTX nr result

ID: Scutellaria24_contig00033819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033819
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38730.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicag...   152   4e-35
gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]    148   5e-34
ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|...   147   9e-34
gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein...   145   3e-33

>emb|CBI38730.3| unnamed protein product [Vitis vinifera]
          Length = 1474

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/87 (82%), Positives = 81/87 (93%)
 Frame = +3

Query: 3    RFEHSEGHDGQSEDIHEKIYYVFLPPELCFVHPLPASLVRGAQRLPSILRRIESMLLAVQ 182
            RFEHSE H+G+S++  +K YYVFLPPELCFVHPLP SLVR AQRLPSI+RR+ESMLLAVQ
Sbjct: 1298 RFEHSEAHEGESDETLDKTYYVFLPPELCFVHPLPGSLVRSAQRLPSIMRRVESMLLAVQ 1357

Query: 183  LKDVINYPVPSSKILEALTAASCQETF 263
            LKDVINYPVP++KILEALTAASCQETF
Sbjct: 1358 LKDVINYPVPAAKILEALTAASCQETF 1384


>ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
            gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like
            protein [Medicago truncatula]
          Length = 1965

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/87 (81%), Positives = 81/87 (93%)
 Frame = +3

Query: 3    RFEHSEGHDGQSEDIHEKIYYVFLPPELCFVHPLPASLVRGAQRLPSILRRIESMLLAVQ 182
            RFEHSEGH+ ++E+ H+K YYVFLPPELC VHPLP SLVRGAQRLPSI+RR+ESMLLAVQ
Sbjct: 1352 RFEHSEGHEDETEETHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQ 1411

Query: 183  LKDVINYPVPSSKILEALTAASCQETF 263
            LK++INYPV +SKILEALTAASCQETF
Sbjct: 1412 LKNMINYPVQASKILEALTAASCQETF 1438


>gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
          Length = 1690

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/87 (80%), Positives = 79/87 (90%)
 Frame = +3

Query: 3    RFEHSEGHDGQSEDIHEKIYYVFLPPELCFVHPLPASLVRGAQRLPSILRRIESMLLAVQ 182
            RFEHSE H+G+ E+  +K YYVFLPPELCF+HPLP SLVRGAQRLPSI+RR+ESMLLAVQ
Sbjct: 1073 RFEHSEEHEGELEEATDKTYYVFLPPELCFLHPLPGSLVRGAQRLPSIMRRVESMLLAVQ 1132

Query: 183  LKDVINYPVPSSKILEALTAASCQETF 263
            LKD+I YPVP+ KILEALTAASCQETF
Sbjct: 1133 LKDMIGYPVPALKILEALTAASCQETF 1159


>ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|222844405|gb|EEE81952.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1817

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/87 (79%), Positives = 80/87 (91%)
 Frame = +3

Query: 3    RFEHSEGHDGQSEDIHEKIYYVFLPPELCFVHPLPASLVRGAQRLPSILRRIESMLLAVQ 182
            RFEHS+ ++G +E+  +K YYVFLPPELC VHPLP SLVRGAQRLPSI+RR+ESMLLAV+
Sbjct: 1246 RFEHSDSNEGDAEENLDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVE 1305

Query: 183  LKDVINYPVPSSKILEALTAASCQETF 263
            LKD+INYPVP+SKILEALTAASCQETF
Sbjct: 1306 LKDIINYPVPASKILEALTAASCQETF 1332


>gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
            III, bacterial [Medicago truncatula]
          Length = 1939

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/93 (76%), Positives = 81/93 (87%), Gaps = 6/93 (6%)
 Frame = +3

Query: 3    RFEHSEGHDGQSEDIHEKIYYVFLPPELCFVHPLPASLVRGAQRLPSILRRIESMLLAVQ 182
            RFEHSEGH+ ++E+ H+K YYVFLPPELC VHPLP SLVRGAQRLPSI+RR+ESMLLAVQ
Sbjct: 1320 RFEHSEGHEDETEETHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQ 1379

Query: 183  LKDVINYPVPSS------KILEALTAASCQETF 263
            LK++INYPV +S      KILEALTAASCQETF
Sbjct: 1380 LKNMINYPVQASKVSSQLKILEALTAASCQETF 1412


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