BLASTX nr result

ID: Scutellaria24_contig00033812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033812
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28722.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23
ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002524751.1| pentatricopeptide repeat-containing protein,...    88   8e-16
ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>emb|CBI28722.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -3

Query: 242  NVTDIQFRQFYNCLLSCHLKFGDLESASHMVLEMLRKAKKAQNSLGVANLIFEADKRGST 63
            N++DIQFRQFYNCLL+CHLKFGDL+SASHMVLEMLRKA++A+NSL  A L+FEA   G+T
Sbjct: 892  NLSDIQFRQFYNCLLTCHLKFGDLDSASHMVLEMLRKAREARNSLSAATLMFEAVGSGNT 951

Query: 62   SPSRGVSVKNLSDMKSDG 9
            S    VS K+LS  KSDG
Sbjct: 952  STQEQVSEKSLSHRKSDG 969


>ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Vitis vinifera]
          Length = 784

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -3

Query: 242 NVTDIQFRQFYNCLLSCHLKFGDLESASHMVLEMLRKAKKAQNSLGVANLIFEADKRGST 63
           N++DIQFRQFYNCLL+CHLKFGDL+SASHMVLEMLRKA++A+NSL  A L+FEA   G+T
Sbjct: 315 NLSDIQFRQFYNCLLTCHLKFGDLDSASHMVLEMLRKAREARNSLSAATLMFEAVGSGNT 374

Query: 62  SPSRGVSVKNLSDMKSDG 9
           S    VS K+LS  KSDG
Sbjct: 375 STQEQVSEKSLSHRKSDG 392


>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/78 (58%), Positives = 60/78 (76%)
 Frame = -3

Query: 242 NVTDIQFRQFYNCLLSCHLKFGDLESASHMVLEMLRKAKKAQNSLGVANLIFEADKRGST 63
           ++TD QFRQFYNCLL+CHLKFGDL++AS+MVL MLRKA++A+NS   A L+F  DK+ S 
Sbjct: 284 SLTDTQFRQFYNCLLTCHLKFGDLDAASNMVLIMLRKAREARNSFATAALLFPIDKKSSP 343

Query: 62  SPSRGVSVKNLSDMKSDG 9
            P   VS ++LS  +S G
Sbjct: 344 GP---VSEESLSHKESGG 358


>ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535935|gb|EEF37594.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 787

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/59 (66%), Positives = 51/59 (86%)
 Frame = -3

Query: 242 NVTDIQFRQFYNCLLSCHLKFGDLESASHMVLEMLRKAKKAQNSLGVANLIFEADKRGS 66
           +++DIQ+RQFYNCLLSCHLKFGDL+SAS MVL+ML KAK+A+NSL  A  +++AD + S
Sbjct: 321 SISDIQYRQFYNCLLSCHLKFGDLDSASDMVLKMLWKAKEARNSLAAAKFVYQADSKSS 379


>ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Cucumis sativus]
           gi|449503826|ref|XP_004162196.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Cucumis sativus]
          Length = 796

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/80 (53%), Positives = 54/80 (67%)
 Frame = -3

Query: 242 NVTDIQFRQFYNCLLSCHLKFGDLESASHMVLEMLRKAKKAQNSLGVANLIFEADKRGST 63
           N++D+QFRQFY+CLL+CHLKFGDLESAS+MVL MLRKAK A+NS+  A L          
Sbjct: 329 NLSDVQFRQFYSCLLTCHLKFGDLESASNMVLGMLRKAKIAKNSVATATLACNT-AENHI 387

Query: 62  SPSRGVSVKNLSDMKSDGPK 3
            PS G   +     ++DG K
Sbjct: 388 KPSSGKDSEKNFICQNDGLK 407


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