BLASTX nr result

ID: Scutellaria24_contig00033755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033755
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]   119   3e-25
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22

>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/85 (68%), Positives = 70/85 (82%)
 Frame = +1

Query: 1   GRGNHRELLGSFSEMRASGVELNVYSFSCLIKSLAGSRALREGLKTHGILIKNGLLGSII 180
           GR ++RE L ++SEMR  GVELNVYSFSC+IKS AG+ A R+GLK H +LIKNGL+ S I
Sbjct: 231 GRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSI 290

Query: 181 VMTSLIDMYFKCGKIKLACSVFEEV 255
           + TSLIDMYFKCGKIKLA  +FEE+
Sbjct: 291 LRTSLIDMYFKCGKIKLARLMFEEI 315


>emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]
          Length = 664

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/85 (68%), Positives = 70/85 (82%)
 Frame = +1

Query: 1   GRGNHRELLGSFSEMRASGVELNVYSFSCLIKSLAGSRALREGLKTHGILIKNGLLGSII 180
           GR ++RE L ++SEMR  GVELNVYSFSC+IKS AG+ A R+GLK H +LIKNGL+ S I
Sbjct: 170 GRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSI 229

Query: 181 VMTSLIDMYFKCGKIKLACSVFEEV 255
           + TSLIDMYFKCGKIKLA  +FEE+
Sbjct: 230 LRTSLIDMYFKCGKIKLARLMFEEI 254


>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Glycine max]
          Length = 682

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/85 (64%), Positives = 72/85 (84%)
 Frame = +1

Query: 1   GRGNHRELLGSFSEMRASGVELNVYSFSCLIKSLAGSRALREGLKTHGILIKNGLLGSII 180
           G+  + ++L +++EMRA GVELNVYSFS +IKS AG+RA  +GLKTHG+LIKNGL+ + I
Sbjct: 193 GKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYI 252

Query: 181 VMTSLIDMYFKCGKIKLACSVFEEV 255
           + TSLIDMYFKCGK++LAC VFEE+
Sbjct: 253 LRTSLIDMYFKCGKVRLACRVFEEI 277


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/85 (60%), Positives = 69/85 (81%)
 Frame = +1

Query: 1   GRGNHRELLGSFSEMRASGVELNVYSFSCLIKSLAGSRALREGLKTHGILIKNGLLGSII 180
           GR ++R +L +++EMR  GVELNVYSF+ +IKS AG+ A  +GLK HG+LIKNGL+GS +
Sbjct: 194 GRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSL 253

Query: 181 VMTSLIDMYFKCGKIKLACSVFEEV 255
           + T+L+DMYFKCGKIKLA  +F E+
Sbjct: 254 LGTTLVDMYFKCGKIKLARQMFGEI 278


>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 696

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/85 (60%), Positives = 69/85 (81%)
 Frame = +1

Query: 1   GRGNHRELLGSFSEMRASGVELNVYSFSCLIKSLAGSRALREGLKTHGILIKNGLLGSII 180
           GR ++R +L +++EMR  GVELNVYSF+ +IKS AG+ A  +GLK HG+LIKNGL+GS +
Sbjct: 194 GRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSL 253

Query: 181 VMTSLIDMYFKCGKIKLACSVFEEV 255
           + T+L+DMYFKCGKIKLA  +F E+
Sbjct: 254 LGTTLVDMYFKCGKIKLARQMFGEI 278


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