BLASTX nr result

ID: Scutellaria24_contig00033729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033729
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568435.2| transducin/WD40 domain-containing protein [Arab...   155   2e-36
ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyra...   155   2e-36
gb|AAK64045.1| unknown protein [Arabidopsis thaliana] gi|5025357...   155   2e-36
ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33

>ref|NP_568435.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|10176840|dbj|BAB10046.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005822|gb|AED93205.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 368

 Score =  155 bits (393), Expect = 2e-36
 Identities = 66/104 (63%), Positives = 83/104 (79%)
 Frame = +3

Query: 3   WDTESNRVIRSYKGHINSRRFVGLSVWRNGGLLSCGSENNQLHVYDKRWGEPVWVRGFDP 182
           W  E  RVIR+Y+GH+N+R FVGLSVWRNG L  CGSENN++ VYD+RWG+PVWV GF+P
Sbjct: 264 WSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEP 323

Query: 183 AGGPARSEPDFVSGVCWRQSGEERCMLVAGGSDGVLHAFLGRKK 314
            G  + S+  FVS VCWRQSG ++C LVAGGSDGVL  ++G++K
Sbjct: 324 VGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVYVGKRK 367


>ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317908|gb|EFH48330.1| nucleotide binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  155 bits (393), Expect = 2e-36
 Identities = 66/104 (63%), Positives = 83/104 (79%)
 Frame = +3

Query: 3   WDTESNRVIRSYKGHINSRRFVGLSVWRNGGLLSCGSENNQLHVYDKRWGEPVWVRGFDP 182
           W  E  RVIR+Y+GH+N+R FVGLSVWRNG L  CGSENN++ VYD+RWG+PVWV GF+P
Sbjct: 261 WSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEP 320

Query: 183 AGGPARSEPDFVSGVCWRQSGEERCMLVAGGSDGVLHAFLGRKK 314
            G  + S+  FVS VCWRQSG ++C LVAGGSDGVL  ++G++K
Sbjct: 321 VGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVYVGKRK 364


>gb|AAK64045.1| unknown protein [Arabidopsis thaliana] gi|50253578|gb|AAT71991.1|
           At5g23730 [Arabidopsis thaliana]
          Length = 243

 Score =  155 bits (393), Expect = 2e-36
 Identities = 66/104 (63%), Positives = 83/104 (79%)
 Frame = +3

Query: 3   WDTESNRVIRSYKGHINSRRFVGLSVWRNGGLLSCGSENNQLHVYDKRWGEPVWVRGFDP 182
           W  E  RVIR+Y+GH+N+R FVGLSVWRNG L  CGSENN++ VYD+RWG+PVWV GF+P
Sbjct: 139 WSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEP 198

Query: 183 AGGPARSEPDFVSGVCWRQSGEERCMLVAGGSDGVLHAFLGRKK 314
            G  + S+  FVS VCWRQSG ++C LVAGGSDGVL  ++G++K
Sbjct: 199 VGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVYVGKRK 242


>ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|222859492|gb|EEE97039.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/105 (62%), Positives = 81/105 (77%)
 Frame = +3

Query: 3   WDTESNRVIRSYKGHINSRRFVGLSVWRNGGLLSCGSENNQLHVYDKRWGEPVWVRGFDP 182
           WD++++ VIRSYKGH+NSR F+GLSVWRNGGLL CGSENN++ VYD+RWGEP+WV   +P
Sbjct: 136 WDSDNSNVIRSYKGHVNSRSFIGLSVWRNGGLLGCGSENNKVFVYDRRWGEPIWVHESNP 195

Query: 183 AGGPARSEPDFVSGVCWRQSGEERCMLVAGGSDGVLHAFLGRKKN 317
            G        FVS VCWRQ  E++C LVAGGSDG L  F GR+K+
Sbjct: 196 VGRDG-CGGGFVSSVCWRQVEEDQCTLVAGGSDGDLQVFQGRRKS 239


>ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|222868906|gb|EEF06037.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  144 bits (364), Expect = 6e-33
 Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   WDTESNRVIRSYKGHINSRRFVGLSVWRNGGLLSCGSENNQLHVYDKRWGEPVWV-RGFD 179
           W+++++ VIR+Y GH+N+R FVGLSVWRNGGLL CGSENN++ VYDKRW EPVWV     
Sbjct: 136 WNSDNSNVIRTYHGHVNNRNFVGLSVWRNGGLLGCGSENNKVFVYDKRWSEPVWVHESSS 195

Query: 180 PAGGPARSEPDFVSGVCWRQSGEERCMLVAGGSDGVLHAFLGRKK 314
           P  G  R    FVS VCWRQ GE++C LV GGSDG+L  F G++K
Sbjct: 196 PIMGKDRCGSGFVSSVCWRQVGEDQCTLVTGGSDGILQVFRGKRK 240


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