BLASTX nr result
ID: Scutellaria24_contig00033698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00033698
(318 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190611.1| pentatricopeptide repeat-containing protein [Ar... 125 5e-27
ref|XP_002307242.1| predicted protein [Populus trichocarpa] gi|2... 119 2e-25
ref|XP_002877745.1| pentatricopeptide repeat-containing protein ... 114 6e-24
ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containi... 112 3e-23
ref|XP_002522354.1| pentatricopeptide repeat-containing protein,... 112 4e-23
>ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g50420 gi|6561982|emb|CAB62471.1| putative protein
[Arabidopsis thaliana] gi|332645144|gb|AEE78665.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 794
Score = 125 bits (313), Expect = 5e-27
Identities = 57/105 (54%), Positives = 78/105 (74%)
Frame = +1
Query: 1 KKVFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGVNPTQFTYSLVLNGCAKL 180
+++F + ++DAV WN++I G +KN KI + L F+ ML GV+PTQFTYS+VLNGC+KL
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 181 QNYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
+Y G+ IHA+++ S + DLPL N+LLDMYCSCGD AF VF
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVF 358
Score = 54.7 bits (130), Expect = 8e-06
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +1
Query: 7 VFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGV-NPTQFTYSLVLNGCAKLQ 183
VF +I + + V+WNSIISG +NG +++ +++ +LR P ++T+S ++ A+ +
Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Query: 184 NYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
+ G+ +H QV + G + + +LL MY + +A VF
Sbjct: 417 RFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
>ref|XP_002307242.1| predicted protein [Populus trichocarpa] gi|222856691|gb|EEE94238.1|
predicted protein [Populus trichocarpa]
Length = 561
Score = 119 bits (299), Expect = 2e-25
Identities = 58/104 (55%), Positives = 73/104 (70%)
Frame = +1
Query: 4 KVFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGVNPTQFTYSLVLNGCAKLQ 183
KVF ++ KDAV WNS+I G +KN K+ E + LF M+R G+ PT+FTYS++LN C KL
Sbjct: 66 KVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNACGKLG 125
Query: 184 NYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
+ G+ IHAQV+ DLPLQN+LLDMYCSCGDT F VF
Sbjct: 126 DCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVF 169
Score = 65.5 bits (158), Expect = 4e-09
Identities = 34/105 (32%), Positives = 54/105 (51%)
Frame = +1
Query: 1 KKVFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGVNPTQFTYSLVLNGCAKL 180
++VF+ I KD V W +I G+ + G +++LF M +G F S L+ CA L
Sbjct: 268 EQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSMMCHEGYKIDSFALSGALSACADL 327
Query: 181 QNYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
+ G IH Q ++ G ++ + SL+ MY GD AA ++F
Sbjct: 328 ATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSIF 372
Score = 65.1 bits (157), Expect = 6e-09
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Frame = +1
Query: 7 VFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGV---NPTQFTYSLVLNGCAK 177
VF++I + D V+WNS+ISGY +NG+ +++ LF ++ GV P ++T++ V++ +
Sbjct: 168 VFNKIENPDLVSWNSMISGYAENGEGADAMNLFLQLV--GVFLPKPDEYTFAAVISATSA 225
Query: 178 LQNYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
G+ +HAQVL+ G+ + + +LL MY GD +A VF
Sbjct: 226 FSATCYGKPLHAQVLKVGSERSVFIGTTLLSMYLKNGDIESAEQVF 271
>ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323583|gb|EFH54004.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 764
Score = 114 bits (286), Expect = 6e-24
Identities = 55/107 (51%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Frame = +1
Query: 1 KKVFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGVNPTQFTYSLVLNGCAKL 180
+++F + DAV WN++I G +N KI + L LF+ ML GV+PTQFTYS+VLN C+KL
Sbjct: 167 RRIFECVNGGDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKL 226
Query: 181 --QNYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
Y G+ IHA+++ S DLP++N+LLDMYCSCGD AF VF
Sbjct: 227 GSYRYSVGKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVF 273
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/107 (26%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 KKVFSQIMDKDAVTWNSIISGYMKNGKILE-SLELFQCMLRDGVNPTQFTYSLVLNGCAK 177
+K+F ++ +++ V++N++ S Y +N + L M + + P T++ ++ C
Sbjct: 65 RKLFDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTV 124
Query: 178 LQNYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVFQ 318
L++ G +H+Q+++ G ++ +Q S+L MY SCGD +A +F+
Sbjct: 125 LEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFE 171
Score = 56.6 bits (135), Expect = 2e-06
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +1
Query: 7 VFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGV-NPTQFTYSLVLNGCAKLQ 183
VF +I + + V+WNSIISG +NG +++ +++ +LR P ++T+S + A+ +
Sbjct: 272 VFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPE 331
Query: 184 NYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
+ G+ +H QV + G + + +LL MY G+ +A VF
Sbjct: 332 KFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVF 375
>ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 112 bits (280), Expect = 3e-23
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +1
Query: 7 VFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGVNPTQFTYSLVLNGCAKLQN 186
VF ++D+D V WNS+I GY+KN KI E + LF M+ G PTQFTY +VLN C++L++
Sbjct: 172 VFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKD 231
Query: 187 YDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
Y SGR IHA V+ +DL LQN+L+DMYC+ G+ A+ +F
Sbjct: 232 YRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIF 274
Score = 63.5 bits (153), Expect = 2e-08
Identities = 34/104 (32%), Positives = 52/104 (50%)
Frame = +1
Query: 4 KVFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGVNPTQFTYSLVLNGCAKLQ 183
+VF I KD V W +I+GY K + ++ F M+ +G + S V+N CA L
Sbjct: 374 RVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLA 433
Query: 184 NYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
G IH ++ G +++ + SL+DMY G AA+ VF
Sbjct: 434 VLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVF 477
Score = 60.5 bits (145), Expect = 1e-07
Identities = 33/105 (31%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = +1
Query: 7 VFSQIMDKDAVTWNSIISGYMKNGK--ILESLELFQCMLRDGVNPTQFTYSLVLNGCAKL 180
VF ++ + V++N++++ Y + + +LEL+ M+ +G+ P+ T++ +L + L
Sbjct: 70 VFDKMPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLL 129
Query: 181 QNYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
+++ G +HA+ + G D+ LQ SLL+MY +CGD S+A VF
Sbjct: 130 EHWWFGSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVF 173
Score = 55.1 bits (131), Expect = 6e-06
Identities = 29/105 (27%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +1
Query: 4 KVFSQIMDKDAVTWNSIISGYMKNGKILESLELF-QCMLRDGVNPTQFTYSLVLNGCAKL 180
++FS++ + D V+WNS+I+GY +N +++ LF Q P +TY+ +++
Sbjct: 272 RIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVF 331
Query: 181 QNYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
+ G+ +HA+V+++G + + ++L+ MY ++ AA+ VF
Sbjct: 332 PSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVF 376
>ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538432|gb|EEF40038.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 704
Score = 112 bits (279), Expect = 4e-23
Identities = 58/104 (55%), Positives = 69/104 (66%)
Frame = +1
Query: 4 KVFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGVNPTQFTYSLVLNGCAKLQ 183
KVF ++KD V WNS+ISGY+KN +I ESL LF M+R G TQFT S+ LN C+KL
Sbjct: 166 KVFGYAVEKDDVFWNSMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLG 225
Query: 184 NYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
Y GR IHAQV+ S D LQN+LLDMY SCGD A +F
Sbjct: 226 YYSQGRIIHAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLF 269
Score = 64.3 bits (155), Expect = 1e-08
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +1
Query: 1 KKVFSQIMDKDAVTWNSIISGYMKNGKILE-SLELFQCMLRDGVNPTQFTYSLVLNGCAK 177
+K+F ++ K+A+++N++I+ Y ++ S +LF M + P T++ +L C
Sbjct: 63 QKLFDRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCL 122
Query: 178 LQNYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
L+++ G +H QVLQ G D+ +Q LL MY CGD +A VF
Sbjct: 123 LEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVF 168
Score = 61.6 bits (148), Expect = 6e-08
Identities = 33/103 (32%), Positives = 55/103 (53%)
Frame = +1
Query: 7 VFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCMLRDGVNPTQFTYSLVLNGCAKLQN 186
VFS + +KD V W +I G+ + G +++LF M ++G F S L+ CA L
Sbjct: 370 VFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADLAI 429
Query: 187 YDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
G+ +H Q +++G ++ + SL+DMY G+ AA +F
Sbjct: 430 LKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIF 472
Score = 59.7 bits (143), Expect = 2e-07
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +1
Query: 7 VFSQIMDKDAVTWNSIISGYMKNGKILESLELFQCML-RDGVNPTQFTYSLVLNGCAKLQ 183
+FS+I ++WNS+IS + KN + +++ LF +L P ++T++ +++ + +
Sbjct: 268 LFSRIQIPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCKPDEYTFTAIISATGEFR 327
Query: 184 NYDSGRRIHAQVLQSGTYIDLPLQNSLLDMYCSCGDTSAAFAVF 315
D G+ +HAQV+++G + + N+LL MY D AA VF
Sbjct: 328 ATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGVF 371