BLASTX nr result
ID: Scutellaria24_contig00033514
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00033514
(321 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19924.3| unnamed protein product [Vitis vinifera] 163 2e-38
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi... 163 2e-38
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,... 156 1e-36
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34
ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2... 137 9e-31
>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 163 bits (412), Expect = 2e-38
Identities = 79/104 (75%), Positives = 87/104 (83%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N+FVGN+LL MYGKCGNL S RL FY MSH RDR+SWNALLT +A HGLSEEA IF +M
Sbjct: 428 NLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEM 487
Query: 182 LRETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIV 313
ET PSKFT GTLL+ACANIFALE GKQIH FMIRNGY+ID+V
Sbjct: 488 QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVV 531
Score = 85.1 bits (209), Expect = 5e-15
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N+ +G+SL+D+YGKC ++ AR F + + + +SWN ++ Y G +EA ++F+KM
Sbjct: 195 NVILGSSLVDIYGKCRVMSDARRMFDEIEN-PNAISWNVIVRRYLEMGNEKEAVVMFFKM 253
Query: 182 LRET-KPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVIS 319
+R +P FTF L AC++I AL+ G QIH IR GYD D V+S
Sbjct: 254 IRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVS 300
Score = 73.6 bits (179), Expect = 2e-11
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 IFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKML 184
IF+ N ++ YGKC L AR F M RD SWNA++T YA G +E+A +F +M
Sbjct: 95 IFLLNRAIETYGKCSCLDDARELFEEMPQ-RDGGSWNAMITAYAQGGCAEKALWLFSRMN 153
Query: 185 R-ETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVI 316
R ++ TF ++L +CA + AL L KQIH +++ G+ ++++
Sbjct: 154 RLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVIL 198
Score = 58.9 bits (141), Expect = 4e-07
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Frame = +2
Query: 11 VGNSLLDMYGKCGNLTSARLCF-----------------YCMSHL-------------RD 100
V +SL+DMY KCG+L SA F Y MS R
Sbjct: 299 VSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERS 358
Query: 101 RVSWNALLTGYASHGLSEEATMIFWKMLRETKP-SKFTFGTLLAACANIFALELGKQIHA 277
+SWNA+L GY EEA + M + T+ T G +L CA + +E GKQ+H
Sbjct: 359 VISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHG 418
Query: 278 FMIRNG 295
F+ R+G
Sbjct: 419 FIYRHG 424
>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 163 bits (412), Expect = 2e-38
Identities = 79/104 (75%), Positives = 87/104 (83%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N+FVGN+LL MYGKCGNL S RL FY MSH RDR+SWNALLT +A HGLSEEA IF +M
Sbjct: 428 NLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEM 487
Query: 182 LRETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIV 313
ET PSKFT GTLL+ACANIFALE GKQIH FMIRNGY+ID+V
Sbjct: 488 QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVV 531
Score = 85.1 bits (209), Expect = 5e-15
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N+ +G+SL+D+YGKC ++ AR F + + + +SWN ++ Y G +EA ++F+KM
Sbjct: 195 NVILGSSLVDIYGKCRVMSDARRMFDEIEN-PNAISWNVIVRRYLEMGNEKEAVVMFFKM 253
Query: 182 LRET-KPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVIS 319
+R +P FTF L AC++I AL+ G QIH IR GYD D V+S
Sbjct: 254 IRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVS 300
Score = 73.6 bits (179), Expect = 2e-11
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 IFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKML 184
IF+ N ++ YGKC L AR F M RD SWNA++T YA G +E+A +F +M
Sbjct: 95 IFLLNRAIETYGKCSCLDDARELFEEMPQ-RDGGSWNAMITAYAQGGCAEKALWLFSRMN 153
Query: 185 R-ETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVI 316
R ++ TF ++L +CA + AL L KQIH +++ G+ ++++
Sbjct: 154 RLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVIL 198
Score = 58.9 bits (141), Expect = 4e-07
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Frame = +2
Query: 11 VGNSLLDMYGKCGNLTSARLCF-----------------YCMSHL-------------RD 100
V +SL+DMY KCG+L SA F Y MS R
Sbjct: 299 VSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERS 358
Query: 101 RVSWNALLTGYASHGLSEEATMIFWKMLRETKP-SKFTFGTLLAACANIFALELGKQIHA 277
+SWNA+L GY EEA + M + T+ T G +L CA + +E GKQ+H
Sbjct: 359 VISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHG 418
Query: 278 FMIRNG 295
F+ R+G
Sbjct: 419 FIYRHG 424
>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 718
Score = 156 bits (395), Expect = 1e-36
Identities = 77/105 (73%), Positives = 86/105 (81%)
Frame = +2
Query: 5 IFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKML 184
I VGN+LLDMYGKCGNL SAR+ FY MS RD +SWNALLT YA H SE+A MIF +M
Sbjct: 426 ILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQAMMIFGEMQ 485
Query: 185 RETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVIS 319
ETKPS FTFGTLLAACANIFAL+ GK+IH FMIRNGY++D VIS
Sbjct: 486 WETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGYNLDTVIS 530
Score = 78.6 bits (192), Expect = 5e-13
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N+ +G++L+D+YGKC ++ ARL F + + D V+WN ++ Y G EA +F+KM
Sbjct: 192 NVILGSALVDVYGKCKVMSEARLMFNEIENCND-VTWNVIVRRYLDVGNEREAVKMFFKM 250
Query: 182 LR-ETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVIS 319
+ + +P FTF L AC+ + AL G QIHAF I+ ++ D +S
Sbjct: 251 FQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVS 297
Score = 63.9 bits (154), Expect = 1e-08
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 IFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKML 184
IF+ N ++ YGKC L AR F M RD SWNA++ Y G +E+A +F M
Sbjct: 92 IFLLNRAIETYGKCECLKDARELFDEMPQ-RDGGSWNAIIKAYTQCGYAEKALGLFKDMN 150
Query: 185 RE-TKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVI 316
+E ++ TF ++L +C+++ L L +QIH +++ G+ ++++
Sbjct: 151 KEGVFANEITFASVLKSCSDVLDLSLSRQIHGLIVKCGFCGNVIL 195
Score = 62.8 bits (151), Expect = 3e-08
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 32/134 (23%)
Frame = +2
Query: 11 VGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM--- 181
V +SL +MY KCG L SAR+ F RD +SW ++++ YA G + EA +F KM
Sbjct: 296 VSSSLSNMYAKCGKLESARMIFD-QHGSRDVISWTSMVSAYALSGRTREARELFEKMPEW 354
Query: 182 ---------------------------LRETKPS--KFTFGTLLAACANIFALELGKQIH 274
+R T T G LL CA I +E+GKQ H
Sbjct: 355 SVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEMGKQAH 414
Query: 275 AFMIRNGYDIDIVI 316
F+ R+G+ I++
Sbjct: 415 GFIYRHGFSSCILV 428
>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 150 bits (378), Expect = 1e-34
Identities = 70/106 (66%), Positives = 86/106 (81%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N+++GN+LLDMYGKCGNL SA++ FY MS RD+VSWNALLT +A HG+SE+A IF +M
Sbjct: 427 NLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEM 486
Query: 182 LRETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVIS 319
ET P+ FTF TLL ACAN+FALE GKQIH FM+RN Y IDIV++
Sbjct: 487 QLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLT 532
Score = 75.1 bits (183), Expect = 6e-12
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N+ + +SL+D+YGKC + AR F + + D VSWN ++ Y G +EA +F++M
Sbjct: 194 NVILESSLVDVYGKCRLMNDARSMFDEIQNRND-VSWNVIVRRYLEVGNGKEAVSMFFQM 252
Query: 182 LRET-KPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVIS 319
RE+ PS FTF L AC+ + AL G QIH +++ G + + VIS
Sbjct: 253 FRESLMPSSFTFSNALIACSRMAALIEGGQIHGIVVKVGLEENEVIS 299
Score = 63.9 bits (154), Expect = 1e-08
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 IFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKML 184
IF+ N ++ YGKCG L AR F M RD SWNA++T Y +G + EA ++ +
Sbjct: 94 IFLLNRAIEAYGKCGCLKDARELFDEMPQ-RDGGSWNAMITAYTQNGYALEALNLYLDLN 152
Query: 185 RE-TKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVI 316
+ ++ T ++L +C ++ AL +QIH +++ G+ ++++
Sbjct: 153 KSGVYATEVTLASILRSCGSVLALHFSRQIHGHIVKCGFVGNVIL 197
>ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1|
predicted protein [Populus trichocarpa]
Length = 709
Score = 137 bits (345), Expect = 9e-31
Identities = 69/106 (65%), Positives = 78/106 (73%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N +GN+LLDMY KCGNL SA + F+ M RD VSWN LLT YA +SE+A IF +M
Sbjct: 425 NTVIGNALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQAMSIFREM 484
Query: 182 LRETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVIS 319
ETKP KF F TLLAACAN FAL+ GKQIH FMIRNGYDID VI+
Sbjct: 485 QWETKPHKFIFATLLAACANTFALDQGKQIHGFMIRNGYDIDTVIA 530
Score = 71.6 bits (174), Expect = 6e-11
Identities = 36/106 (33%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 2 NIFVGNSLLDMYGKCGNLTSARLCFYCMSHLRDRVSWNALLTGYASHGLSEEATMIFWKM 181
N+ VG+SL+D+YGKCG ++ +R F + + + V+WN ++ Y G EA ++F+KM
Sbjct: 192 NVIVGSSLVDVYGKCGAMSESRRIFDEIEN-PNNVTWNIIVRRYLEVGDENEAVVMFFKM 250
Query: 182 LR-ETKPSKFTFGTLLAACANIFALELGKQIHAFMIRNGYDIDIVI 316
R + +P +TF L AC+++ A++ G QIH + ++ + V+
Sbjct: 251 FRAKLRPLSYTFSNALVACSDMRAVKEGMQIHGVATKINFEEEEVV 296
Score = 58.2 bits (139), Expect = 7e-07
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 31/131 (23%)
Frame = +2
Query: 17 NSLLDMYGKCGNLTSARLCF-----------------YCMSHL-------------RDRV 106
+SL+DMY KCG + SAR F Y MS R+ V
Sbjct: 298 SSLIDMYVKCGEIESARRVFDLPGSRDLISWTSMVSAYAMSGRMREARELFDEMPERNMV 357
Query: 107 SWNALLTGYASHGLSEEATMIFWKMLRETKP-SKFTFGTLLAACANIFALELGKQIHAFM 283
S+NALL GY EEA + M R T+ TF +L C+ + +++GKQ+H F+
Sbjct: 358 SYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCSGLSDVDMGKQVHGFI 417
Query: 284 IRNGYDIDIVI 316
R+G+ + VI
Sbjct: 418 YRHGWLSNTVI 428