BLASTX nr result

ID: Scutellaria24_contig00033509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033509
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 ...    56   3e-06
emb|CAN83143.1| hypothetical protein VITISV_040782 [Vitis vinifera]    56   3e-06
gb|ACJ85539.1| unknown [Medicago truncatula]                           56   3e-06
ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [...    55   8e-06

>ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 homolog [Vitis
           vinifera] gi|297745545|emb|CBI40710.3| unnamed protein
           product [Vitis vinifera]
          Length = 801

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -1

Query: 111 MGGSRHQLNKAHKTRFASKSSRNVHKVSSQDKFKMSK 1
           MGGSR Q+NKAHKTRF+SKSSR VHK S Q+K +++K
Sbjct: 1   MGGSRVQVNKAHKTRFSSKSSRQVHKTSLQEKSRITK 37


>emb|CAN83143.1| hypothetical protein VITISV_040782 [Vitis vinifera]
          Length = 502

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -1

Query: 111 MGGSRHQLNKAHKTRFASKSSRNVHKVSSQDKFKMSK 1
           MGGSR Q+NKAHKTRF+SKSSR VHK S Q+K +++K
Sbjct: 1   MGGSRVQVNKAHKTRFSSKSSRQVHKTSLQEKSRITK 37


>gb|ACJ85539.1| unknown [Medicago truncatula]
          Length = 378

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -1

Query: 111 MGGSRHQLNKAHKTRFASKSSRNVHKVSSQDKFKMSK 1
           MGG +HQ+NKAHK+RF+SKSSRN+HK S +D+  + K
Sbjct: 1   MGGGKHQINKAHKSRFSSKSSRNIHKTSVKDRLAIVK 37


>ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [Ricinus communis]
           gi|223551363|gb|EEF52849.1| ribosome biogenesis protein
           tsr1, putative [Ricinus communis]
          Length = 792

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/37 (64%), Positives = 33/37 (89%)
 Frame = -1

Query: 111 MGGSRHQLNKAHKTRFASKSSRNVHKVSSQDKFKMSK 1
           MGGSR Q+NKAHK+RF+SKS+RN+HK S +DK +++K
Sbjct: 1   MGGSRAQVNKAHKSRFSSKSTRNLHKTSLRDKNRIAK 37


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