BLASTX nr result

ID: Scutellaria24_contig00033481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033481
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524729.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    58   7e-07
ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    55   4e-06
ref|XP_003553280.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    55   6e-06
ref|XP_002873665.1| hypothetical protein ARALYDRAFT_488284 [Arab...    55   8e-06
gb|AAX20031.1| RING-finger protein [Capsicum annuum]                   55   8e-06

>ref|XP_003524729.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 491

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
 Frame = -2

Query: 262 TQSSASGW-QHDSGQASYSQYAQNYPVQHPYPAGYPPQNEYYAXXXXXXXXXXPR----Y 98
           + SSAS W  +    + Y Q    Y  Q P    YP Q +YYA                +
Sbjct: 20  SSSSASSWGSYPDPNSGYGQGGYTYEQQQP---SYPTQQQYYAQPPPPLPQNYGYEPQPH 76

Query: 97  SGAPSQSHVSHKKFDRRYSRIADNYNSLDEVT 2
           +     SH + K+ DR+YSRIADNYNS+DEVT
Sbjct: 77  ASGRVASHRNEKRLDRKYSRIADNYNSIDEVT 108


>ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
           gi|296087586|emb|CBI34842.3| unnamed protein product
           [Vitis vinifera]
          Length = 461

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
 Frame = -2

Query: 256 SSASGWQHDS-GQASYSQYAQNYPVQHP-YPAGYPPQNEY--YAXXXXXXXXXXPRYSGA 89
           SS+S   H    Q+ Y Q  QNYP Q P YP+  PPQ  Y  YA          P+ + +
Sbjct: 15  SSSSRSNHGGYSQSDYGQEYQNYPPQQPSYPSYAPPQQPYPSYAPPQQYQSHEPPQQNYS 74

Query: 88  PSQSHVSHKK-FDRRYSRIADNYNSLDEVT 2
            SQ +  +++  +R YSRIAD+Y SLDEVT
Sbjct: 75  SSQGNGDNRRRLERMYSRIADDYRSLDEVT 104


>ref|XP_003553280.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 496

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
 Frame = -2

Query: 262 TQSSASGW------QHDSGQASYSQYAQ--NYPVQHPYPAGYPPQNEYYAXXXXXXXXXX 107
           + SSAS W      Q   G   Y+   Q  +YP Q PY A  PP    Y           
Sbjct: 21  SSSSASSWGSYPDPQSGYGHGGYAYEPQQPSYPTQQPYYAQPPPPPPNYGNEPQP----- 75

Query: 106 PRYSGAPSQSHVSHKKFDRRYSRIADNYNSLDEVT 2
             ++      H + K+ DR+YSRI DNYNS+DEVT
Sbjct: 76  --HASGRVAGHRNEKRLDRKYSRITDNYNSIDEVT 108


>ref|XP_002873665.1| hypothetical protein ARALYDRAFT_488284 [Arabidopsis lyrata subsp.
           lyrata] gi|297319502|gb|EFH49924.1| hypothetical protein
           ARALYDRAFT_488284 [Arabidopsis lyrata subsp. lyrata]
          Length = 466

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 SASGWQHDSGQASYSQY-AQNYPVQHPYPAGYPPQNEYYAXXXXXXXXXXPRYSGAPSQS 77
           S+S W   + Q SY QY A++Y   +P P  Y P  EY              YS  PSQS
Sbjct: 26  SSSSW---ASQQSYPQYGAESY--NYPPPPSYAPPPEYTQTQPLPPLYSTQSYSAPPSQS 80

Query: 76  HVSH--KKFDRRYSRIADNYNSLDEVT 2
           + S   K+ +R+YS+I+D+Y+SL++VT
Sbjct: 81  YGSDNKKRLERKYSKISDDYSSLEQVT 107


>gb|AAX20031.1| RING-finger protein [Capsicum annuum]
          Length = 484

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
 Frame = -2

Query: 256 SSASGW-QHDSGQASYSQYAQNYPVQHPYPAGYPPQNEYYAXXXXXXXXXXP-------- 104
           S    W Q  S ++S++QY   YP  H     YP  +  Y+          P        
Sbjct: 6   SREDSWRQTSSTRSSWNQY--EYPPTHSSSPSYPQDSYSYSSQQQAVPSYAPPPPHQQAV 63

Query: 103 -RYSGAPSQ----SHVSHKKFDRRYSRIADNYNSLDEVT 2
             Y+ AP Q    SH S  + DRRYSRIADNYNSLDEVT
Sbjct: 64  PSYAPAPPQQNYASHASRPRLDRRYSRIADNYNSLDEVT 102


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