BLASTX nr result

ID: Scutellaria24_contig00033479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033479
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH56591.1| polyprotein [Navel orange infectious mottling vi...   105   3e-21
dbj|BAH56589.1| polyprotein [Citrus mosaic sadwavirus]                 98   8e-19
dbj|BAA92934.1| polyprotein [Citrus mosaic sadwavirus strain ND-1]     94   1e-17
dbj|BAH56590.1| polyprotein [Citrus mosaic sadwavirus strain ND-1]     94   1e-17
dbj|BAA92935.1| polyprotein [Citrus mosaic sadwavirus]                 92   4e-17

>dbj|BAH56591.1| polyprotein [Navel orange infectious mottling virus]
          Length = 1576

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/84 (65%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = -1

Query: 250  LTRSATLRDTDVSHPSNPNVHTRLDSSSGSVLTPTIDDNREVPV-SGEEERRRPHGSAIQ 74
            LTRSATL+D D+ HP NPNV      ++ +       DNRE+PV   EEERRRPHGSAIQ
Sbjct: 860  LTRSATLQDDDILHPLNPNVTIESGDNNNNNCPTGNVDNREIPVVEEEEERRRPHGSAIQ 919

Query: 73   RGFTEFSARNENVIEHLYVPSMDG 2
            RGF EFS RNENVIEHLYVPSM G
Sbjct: 920  RGFAEFSERNENVIEHLYVPSMHG 943


>dbj|BAH56589.1| polyprotein [Citrus mosaic sadwavirus]
          Length = 1574

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 55/86 (63%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
 Frame = -1

Query: 250  LTRSATLRDTDVSHPSNPNVHTRLDSSSGSVLTPTIDDNREVPVSGEEE---RRRPHGSA 80
            LTRSATLRDTDVS P NPN        +G V    IDDN E+PV+ EE    RR P GSA
Sbjct: 864  LTRSATLRDTDVSGPVNPN--------TGRVSERQIDDNSEIPVADEEPIGGRRLPRGSA 915

Query: 79   IQRGFTEFSARNENVIEHLYVPSMDG 2
             QRGFTEFS RNEN IEHL+VPSM G
Sbjct: 916  FQRGFTEFSERNENKIEHLFVPSMHG 941


>dbj|BAA92934.1| polyprotein [Citrus mosaic sadwavirus strain ND-1]
          Length = 1443

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/86 (62%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
 Frame = -1

Query: 250 LTRSATLRDTDVSHPSNPNVHTRLDSSSGSVLTPTIDDNREVPVSGEE---ERRRPHGSA 80
           LTRSAT RDTDVS P+NPN+        G    P   DN EVPVS EE   ERR P GSA
Sbjct: 733 LTRSATHRDTDVSEPANPNI------KQGRANQP---DNNEVPVSEEEPTGERRLPGGSA 783

Query: 79  IQRGFTEFSARNENVIEHLYVPSMDG 2
           + RGFTEFS RNEN IEH YVPSM G
Sbjct: 784 VHRGFTEFSERNENKIEHFYVPSMHG 809


>dbj|BAH56590.1| polyprotein [Citrus mosaic sadwavirus strain ND-1]
          Length = 1571

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/86 (62%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
 Frame = -1

Query: 250  LTRSATLRDTDVSHPSNPNVHTRLDSSSGSVLTPTIDDNREVPVSGEE---ERRRPHGSA 80
            LTRSAT RDTDVS P+NPN+        G    P   DN EVPVS EE   ERR P GSA
Sbjct: 861  LTRSATHRDTDVSEPANPNI------KQGRANQP---DNNEVPVSEEEPTGERRLPGGSA 911

Query: 79   IQRGFTEFSARNENVIEHLYVPSMDG 2
            + RGFTEFS RNEN IEH YVPSM G
Sbjct: 912  VHRGFTEFSERNENKIEHFYVPSMHG 937


>dbj|BAA92935.1| polyprotein [Citrus mosaic sadwavirus]
          Length = 922

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/86 (60%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
 Frame = -1

Query: 250 LTRSATLRDTDVSHPSNPNVHTRLDSSSGSVLTPTIDDNREVPVSGEEE---RRRPHGSA 80
           LTRSATLRDTDVS P+NPN        +G      IDDN E+PV+       RR P GSA
Sbjct: 212 LTRSATLRDTDVSEPANPN--------TGQGSERQIDDNSEIPVADGGPIGGRRLPRGSA 263

Query: 79  IQRGFTEFSARNENVIEHLYVPSMDG 2
            QRGFTEFS RNEN IEHL+VPSM G
Sbjct: 264 FQRGFTEFSERNENKIEHLFVPSMHG 289


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