BLASTX nr result

ID: Scutellaria24_contig00033473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033473
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21655.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog ...    79   5e-13
ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog ...    69   5e-10
ref|NP_001169396.1| uncharacterized protein LOC100383265 [Zea ma...    67   2e-09
gb|EAZ14306.1| hypothetical protein OsJ_04232 [Oryza sativa Japo...    66   3e-09

>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 10/106 (9%)
 Frame = -1

Query: 368 LVLTTKSTTFGDKQSTSDMMRKR-------PDEKVFSSRGPRTQSHRDFMPSVWQSFVSH 210
           LVL TK+T  GD  ST+++ R         P      + GP+  S+R+FMP VWQSFV+H
Sbjct: 218 LVLATKATILGDTYSTNEVKRTSMKLSSNDPSNLRTVTGGPQKLSYREFMPLVWQSFVTH 277

Query: 209 RILLRASDD---VRRHQNHPTFTTEWLLPSLEFSDQFTVNDDGLLV 81
           RIL+RA+DD     ++Q+   F +EWL+PSL FSD+F V D G+ V
Sbjct: 278 RILVRAADDDPANSKYQSRSIFLSEWLMPSLNFSDKFIVRDAGVFV 323


>ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog [Glycine max]
          Length = 310

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
 Frame = -1

Query: 368 LVLTTKSTTFGDKQSTSDMMRKRPDEKVFS---SRGPRTQSHRDFMPSVWQSFVSHRILL 198
           L++ TKS  FG++ ST+    K   E+  S   +R  +   +R++MPSVWQSFV+HRIL+
Sbjct: 207 LIIATKSVIFGNRYSTASNEVKGNMEERCSKNVTRNHQNYLYREYMPSVWQSFVTHRILV 266

Query: 197 RASDD---VRRHQNHPTFTTEWLLPSLEFSDQFTVNDDGLLV 81
           R+SD+      +QN   +  EWLLP L F D+  V D G+ V
Sbjct: 267 RSSDEHPVTTNNQNSSFYLLEWLLPRLSFPDKIVVKDAGVFV 308


>ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog [Glycine max]
          Length = 264

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -1

Query: 353 KSTTFGDKQSTSDMMRKRPDEKVFSSRGPRTQSHRDFMPSVWQSFVSHRILLRASDD--- 183
           +++ F  ++  S  M +   + V  +R  +   +R++MPSVWQSFV+HRIL+R+SD+   
Sbjct: 171 RASMFLSQRENSKNMEEGCSKNV--ARNHQNFQYREYMPSVWQSFVTHRILVRSSDEHPV 228

Query: 182 VRRHQNHPTFTTEWLLPSLEFSDQFTVNDDGLLV 81
              +QN   +  EWLLP L F D+  V D G+ V
Sbjct: 229 TTNYQNSSFYLLEWLLPRLSFPDKIVVKDAGVFV 262


>ref|NP_001169396.1| uncharacterized protein LOC100383265 [Zea mays]
           gi|224029093|gb|ACN33622.1| unknown [Zea mays]
           gi|414879491|tpg|DAA56622.1| TPA: hypothetical protein
           ZEAMMB73_585387 [Zea mays]
          Length = 340

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
 Frame = -1

Query: 368 LVLTTKSTTFGDKQST--------SDMMRKRPDEKVFSSRGP-RTQSHRDFMPSVWQSFV 216
           LVL TK++ +G+  +T        S  M + P    +S R   RT S+R++MPS+WQSFV
Sbjct: 231 LVLVTKASVYGEGTTTANDFNRDSSKYMLEDPSGLGYSRREEERTLSNREYMPSIWQSFV 290

Query: 215 SHRILLRASDD---VRRHQNHPTFTTEWLLPSLEFSDQFTVNDDGL 87
           +HRI L+   +   V   +  P  T+EW+ P L+  ++F++ DDG+
Sbjct: 291 THRINLQVEAEVPSVLESEVLPLHTSEWVQPCLKMKEKFSIMDDGV 336


>gb|EAZ14306.1| hypothetical protein OsJ_04232 [Oryza sativa Japonica Group]
          Length = 284

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
 Frame = -1

Query: 368 LVLTTKSTTFGD-------KQSTSDMMRKRPDEKVFSSRGPRTQSHRDFMPSVWQSFVSH 210
           LV+ TK+  +G+       ++ TS  M +    +       +  S+R+FMPSVWQSFV+H
Sbjct: 174 LVMATKAPIYGEGFTGNDFQRGTSKQMLEDSTMRCIGQEEEKNISYREFMPSVWQSFVTH 233

Query: 209 RILLRASDDV------RRHQNHPTFTTEWLLPSLEFSDQFTVNDDGLLV 81
           RI L+           + ++  P  T+EW+ PSL   D+F++ DDG+++
Sbjct: 234 RIKLQDLGQEAELFSGQENKELPLRTSEWMQPSLNTKDKFSITDDGVIL 282


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