BLASTX nr result

ID: Scutellaria24_contig00033443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033443
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-...   157   8e-37
emb|CBI15355.3| unnamed protein product [Vitis vinifera]              157   8e-37
emb|CAN73546.1| hypothetical protein VITISV_038180 [Vitis vinifera]   157   8e-37
ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [...   155   4e-36
ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33

>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
          Length = 527

 Score =  157 bits (397), Expect = 8e-37
 Identities = 86/160 (53%), Positives = 104/160 (65%)
 Frame = -1

Query: 480 MNSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXLSLKSSIL 301
           M +  R KVQRKF +RGYT+K+EAL EI  FLS F                  SLKSSIL
Sbjct: 1   MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL 60

Query: 300 DKEPIHRVVSXXXXXXXXXEDCPTTSGYGSAASALKIIDGFDVPKLRYDPIKKLFHKYSG 121
           DKE +HRVVS         E+ P   G  S  SAL+I+D F + K  YDPIKK+F++ +G
Sbjct: 61  DKESVHRVVSLLLEAEAAVEETP---GAISTRSALRIVDAFLMSKFCYDPIKKIFYENTG 117

Query: 120 KLPIHGDASAKVGLYRDRFLLLFQRVSRDPHFSRPIFDSE 1
           +L IHGDASAK  LYR+RFLLLFQR+SRD HFS+P FD+E
Sbjct: 118 RLAIHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTE 157


>emb|CBI15355.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  157 bits (397), Expect = 8e-37
 Identities = 86/160 (53%), Positives = 104/160 (65%)
 Frame = -1

Query: 480 MNSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXLSLKSSIL 301
           M +  R KVQRKF +RGYT+K+EAL EI  FLS F                  SLKSSIL
Sbjct: 1   MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL 60

Query: 300 DKEPIHRVVSXXXXXXXXXEDCPTTSGYGSAASALKIIDGFDVPKLRYDPIKKLFHKYSG 121
           DKE +HRVVS         E+ P   G  S  SAL+I+D F + K  YDPIKK+F++ +G
Sbjct: 61  DKESVHRVVSLLLEAEAAVEETP---GAISTRSALRIVDAFLMSKFCYDPIKKIFYENTG 117

Query: 120 KLPIHGDASAKVGLYRDRFLLLFQRVSRDPHFSRPIFDSE 1
           +L IHGDASAK  LYR+RFLLLFQR+SRD HFS+P FD+E
Sbjct: 118 RLAIHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTE 157


>emb|CAN73546.1| hypothetical protein VITISV_038180 [Vitis vinifera]
          Length = 539

 Score =  157 bits (397), Expect = 8e-37
 Identities = 86/160 (53%), Positives = 104/160 (65%)
 Frame = -1

Query: 480 MNSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXLSLKSSIL 301
           M +  R KVQRKF +RGYT+K+EAL EI  FLS F                  SLKSSIL
Sbjct: 1   MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL 60

Query: 300 DKEPIHRVVSXXXXXXXXXEDCPTTSGYGSAASALKIIDGFDVPKLRYDPIKKLFHKYSG 121
           DKE +HRVVS         E+ P   G  S  SAL+I+D F + K  YDPIKK+F++ +G
Sbjct: 61  DKESVHRVVSLLLEAEAAVEETP---GAISTRSALRIVDAFLMSKFCYDPIKKIFYENTG 117

Query: 120 KLPIHGDASAKVGLYRDRFLLLFQRVSRDPHFSRPIFDSE 1
           +L IHGDASAK  LYR+RFLLLFQR+SRD HFS+P FD+E
Sbjct: 118 RLAIHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTE 157


>ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
           gi|223529398|gb|EEF31361.1| DNA polymerase epsilon
           subunit B, putative [Ricinus communis]
          Length = 536

 Score =  155 bits (391), Expect = 4e-36
 Identities = 82/164 (50%), Positives = 109/164 (66%), Gaps = 5/164 (3%)
 Frame = -1

Query: 477 NSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXLSLK----S 310
           N  +R KVQ+KF +RGYT+K++AL EI  F++RF G                S K    S
Sbjct: 3   NLTIRKKVQKKFKVRGYTLKVDALDEILPFVNRFQGAEDDAIDVLLDRLQSESQKVGVRS 62

Query: 309 SILDKEPIHRVVSXXXXXXXXXEDCPTTS-GYGSAASALKIIDGFDVPKLRYDPIKKLFH 133
           SI+DKEPI RV+S         E+ P+ S    S++SA++++D F VPK R+DPIKK F+
Sbjct: 63  SIIDKEPIRRVISSLVEALDAVEEGPSESVSTSSSSSAIRVVDAFLVPKFRFDPIKKQFY 122

Query: 132 KYSGKLPIHGDASAKVGLYRDRFLLLFQRVSRDPHFSRPIFDSE 1
           +Y+G L IHGD+SAK  LY+DR+LLLFQRVSRD HFS+P FD+E
Sbjct: 123 QYTGGLSIHGDSSAKAALYKDRYLLLFQRVSRDQHFSKPAFDTE 166


>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  145 bits (365), Expect = 4e-33
 Identities = 77/165 (46%), Positives = 105/165 (63%), Gaps = 5/165 (3%)
 Frame = -1

Query: 480 MNSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXLSLK---- 313
           M+S +R  +Q+KF +RGYT+KI+AL +I  F +RF G                S K    
Sbjct: 1   MSSTVRKLIQKKFKIRGYTLKIDALDQILSFTNRFLGAEDEALDLLLDHLQSQSQKLGVR 60

Query: 312 SSILDKEPIHRVVSXXXXXXXXXEDCPTTSG-YGSAASALKIIDGFDVPKLRYDPIKKLF 136
           SSILDKEP++R ++         ++    +G   S+ SA+++ID F +PK RYDPIKK F
Sbjct: 61  SSILDKEPVNRAITALLEADDAVDEDFIANGAVSSSTSAIRVIDAFLIPKFRYDPIKKQF 120

Query: 135 HKYSGKLPIHGDASAKVGLYRDRFLLLFQRVSRDPHFSRPIFDSE 1
           H+++G L IHGDASAK  LY+DRFLLL+QRV RD HFS+P F +E
Sbjct: 121 HEHTGGLHIHGDASAKAALYKDRFLLLYQRVLRDSHFSKPAFHTE 165


Top